Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0005507

Physical Location & Seq

Genomic Coordinates Reverse (-)

19114310 .. 19121558

Gene Structure 7249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g16690.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4779 bp

ATGGGTGATGTTGAAATACCCAGTTGGCTCGAAGGGTTGCCATTGGCACCCGTCTTCCGGCCGACGCATACTGAATTCGCAGACCCGATTGCTTACATATCGAAAATCGAGAAGGAAGCTAGTGGATTTGGTATTTGCAAGATTATCCCACCATTGCCAAAACCCTCAAAAAGATATGTTTTTAGCAACTTGAATAAGTCACTTTTGAAGTGTCCAGAATTGGGTAGTGATGTAAATTCTTTAGAGGGTTGTTCTCCGATGAGAACGGGTTCTGGGGATGGTGGTAATGATGGGGAGGCTAGGGCAGTCTTTACCACAAGACACCAAGAATTGGGTCAGAGTGTGAAAAAGGTGAAAGGGGCAGCAGTTCAGAATCCGCCTTCGGGTGTTGATAAGCAAGTGTGGCAAAGTGGAGAAATTTATACTTTGGAGCAGTTTGAAACCAAGTCTAGGGCTTTTGCAAGGAGCATGCTAGGTTCAATTAGGGAGGTTACCCCATTGGGTATAGAGGAAATGTTTTGGAAGGCAGCTTCTGAGAAGCCAATATATATTGAGTATGCAAATGATGTGCCCGGGTCTGCTTTTGAAGAGCCTGTGGGACAATTCCGCTCTTCTCACAGGCGGAGGCGGAAGAGGAACTCCTACCAGAGAAGAAATGAAAACTCTGATAGCAAGAAAGGTGAAATGATCAGTATCAGCGAAAGAAACTCCCATAATGAGGAAGTTAAGAATGCTACTCGTAGGAATGTTTCGGATACATGTTTAGAGGCATCCAAATTATCTACTGCTCCAGAAATATTATCAGCAGATGAAACTCCCCAATCATCTAGGCAAAAAAATCCAAATTCATGTTGTGATATGGAAGGTACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACTTACAAGTGATTGCACGTTCACCTGGTTCACTTACTCGTTTCATGCCCGATGATATCCCGGGTGTTACTTCTCCTATGGTTTACATTGGCATGTTGTTCAGTTGGTTTGCTTGGCACGTTGAAGATCATGAGCTTCACAGTATGAATTTTCTTCACACTCGATCTTCAAAGACTTGGTATTCTGTTCCAGGCGATTATGCATTTGATTTTGAGGAACTTATTCGCACCGAGGCGTTTGGTAGTAATCTTGACCGCCTAGCTGCTCTCTCACTATTGGGCAATAAAACAACTTTAATTTCACCTGAGGCTGTTGTTGCAGCAGGGATTCCTTGTTGCAGGTTAATACAGAACTCTGGTGAATTTGTTGTGACTTTTCCAAGGGCTTACCATGTAGGATTCAGCCACGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACACCACAATGGCTTAAAGTAGCTAAAGAAGCTGCAGTACGTAGAGCTGCTATGAATTACCTTCCTATGCTCTCCCATCAACAGCTGCTATACCTCTTGACCATGTCTTTTGTTTCGAGGGTGCCAAGGTCCCTACTACCAGGTGTGCGAAGTTCGCGTAGGAGAGATCGGCAAAAGGAAGAAAAGGAGTTTTCAGTGAAGAAGGCTTTTATTGAAGATATAGTAAAGGAAAACAATGTGTTGTCTGTCCTTCTTGGAAAAGAATCAAGTTACCACGCAGTATTATGGAACCATGATTTACTTCCATATACAAGTAAAGATTCCGTAACACCCGGTGGTGGTGCTGCTGTTGATATGAATCCAAAGGAAGATGCTACCCATATTCAGTGTGGAAATTACGATAATGATCAGAAAGTGCTGATTGACGAGATGAGTTTGTATATGGAAAATATGAATGATTTGTATTTGGGAAGTGATGATTTATCACGGGACTTTCAAGTCGACTCAGGCACATTGGCATGTGTGGCTTGTGGTATACTTGGGTTTCCATTTATGTCTGTCGTGCAACCATCTGAGAAAGCATCAATGAAACTGCAAACTGAGAATTTTACTGCTCAAGGTTCCCCTGGCATTTCAGGACTTGAAAATTCTCATTTGTTTCCAGACTGTCATGCATCTGTCATGGGATTTGTTACAGAAGAGGACCTCGTTTCTGTTCCCAACTTTTTGCCACCTGCGAAAGATCCCCTAATTCCTTCTGCAGACAATCTAAAAAAGGGTTGGAATACTGTTAATAAGTTTCTGAGACCAAGGAGTTTCTGCCTTGAGCATGCTGTGGAAATTGTGGACCTGTTGCAGTGCAAAGGTGGAGCGAACATGCTTGTAATTTGCCATTCTGACTATCAAAAAATAAAGGCCCCGGCTGCAGCAATTGCAGAGGAGATTGGTTGCTCTTTCAATTATAATGAGGTTTCATTGGATAATGCATCACAGGAAGATCTGAATTTGATAGAGCTTGCTGTTGATGATGAACGTGATGAATGTGGAGAAGACTGGACCTCGAAGTTGGGTATCAACCTACACTACTGTGTCAAGGTCAGAAAGAATTCGTCCTTGAAGCAAGTCCGGCATGCATTGACATTGGGTGGTTTGTTCTCCAAACAAAGTCCCAGCTCAGATTTTCTGGCCGTCAAATGGCAATCAAGAAGATCTCGCTCTAAAAAGCTTAATCATCCAGTGGATTATAAACCATGTGAGAACATTGAGGAAAAGGATGAAGTGGTGTGTGGAAGGTCAGATGGGACCTCTTTCAAGAGGGAAGAAAAAATAATTCAATATTCAAGAAGGAAGTTGAAGCTTAAAGCAGGGAGTTCTACAGGAGCGGGTAGGGTCTGTGGGCACCCTGCTACAGGTGTTGGTGGTAAAGATAGTAGAATGGCATCAGAAAGCAACATTTGCAACAATGGGAATTCCACGAGCAGTTGTGCAAGATTTGATTCCTCTGCGTCAAGCGGAATGTCTGAAATGTATCCTGTTGTCGAGATGTCTGAAGCAACCAGGGATATCAGTTTGTACTCTACTCCTTCACAAGTTGCAGATACACTTACCACTGCTACGTTAATCGCTGGTAGTGTTGAGGCACAGGTTGATAATCACAGTTTTGAAGAAAGAAACATGAACGGTGAAGGTTGTAAGTTTGCATCAAGGAATATTTCTGATGTGCAAGATGAGATGAGGATACTTGAAGAAGCCAGTCAAGGAAAGTCTGCTACTCCACCTGTCATTGCAGCTGATGAAACGGTTCCAATGCAAATAGAGGAGCAGCAAATGGAAAAAATCAGCAATACCAGTGAATATTGTAATCTAGTATCGGAAGGGCAGTCCCAAGTTATGGCTGGCGTATCTGTTCTTGCTGAGACAACAAACTTATGTGCTGCCAACTCATTTGTTACAAGTTCTGAGCCACAGATGGTGAATACAGTCCTGGAGAAATCTTGCATAAGCAATGAAGTTTGTGATTCCATGACTTCGGATGATGAAGTGCAGCAAGAAATCGAAACTACCAACAGAAGTAAAGACAAGGCGCCAGTTCCATGTAGTTCCCATAATGCTGAAGACTCGAATGATGATGTATCTTTAGTATTCAAACTGGCAGAAGAAATTAAGACTGCGAAAGGAGAAAATGAGGAACCCAGTTTAAGTCCTCGAAGACAACTAATTGAGCCCTCTCCTGCTTCGGTGGAAGGAACTTCTGGAGCTCCAAGAGAGCTCTGTGCTGCAGCAGATTTTTGCCCTGGTCCAATTTCTCGCAGTGAAGAATTTCTAACTGCAGATAGGAGTGGGGGGGGACATGTCTTGACTTCAGTGACACAAATGGAAATAATTCAACCTTGTATCTCAGTGGAAGAATCTTCTGAAGTGCTAAGGGGAGGCTCTTCTGTGGAAGGCACAGATGATGGTGCGACTTCAGACACTGTAGTGCAGCAGGAAGTCCAGACTACAAATGAAGCTATAGAGGCACCCATACTTAGTCTCATCATAGAAACAGAAATGCAGCCCACACCTCGCTTGGTTGAAGAATTTGAGGTTCCCAGAGTGACCTGTGAAACAATAAACATCAGTGGTTCTATGGCCTTGGATGAAGGGTGGAAAAATCGTACTACAAATGGTAGTGAGGAACTCATTCCTAGTCGAGATACTTCAAAATGCCAACCATCTCCTTCAATCCAAACATATTCTAGAGCTAAAAGAAAGCCTCGTGCTGCTCCAGACTTACGCAATGGTGGTAAGGTTTGCTTATCTCTACATGATAAAGAAATGGAAAACATCGGGTCCTCAAATGTGGTTGCACCAAGTCCTGAAATGGGAAGAAAAAGAAAGAGAGAACTGGAGCAAATAATAGATGATAACCTCGAATTCAATGGATTTATTAGAGGGCCGTGTGAGGGGTTGAGACCAAGGGCTGGGAAAGATGCAACGAGTACAAGTGGGGTGGACAACATCCAAGAAGAGGTGGAGGAGAAACCGGTGACAAAGAAGGTGAAGAAACCTTCAGATGTTCCTGTTCCTCCCAAGAAAGAACACGCAAGGAAGTCTCACAGGTGCGACATAGAAAGCTGCCGGATGAGGTTTGCAACAAAGGCGGAGCTAATGTTGCACAAGCGTAACCGCTGCCCACATGAGGGGTGTGGCAAGAGGTTCAGTTCCCACAAGTACGCAGTGAGTCACAGCCGTGTGCATGACGATGATAGGCCCCTCAAGTGCCCGTGGAAAGGCTGCTCCATGTCGTTCAAGTGGGCATGGGCCCGCACTGAGCACATACGTGTGCACACCGGAGAGCGGCCATACCAGTGCAAGGTTGAGGGATGTGGCCTCTTCTTCAGGTTTGTATCAGATTATAGCCGTCACCGCCGGAAAACAGGGCATTATGTGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003700 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009826 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0014070 GO:0016043 GO:0016049 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0032451 GO:0032452 GO:0032502 GO:0032989 GO:0033169 GO:0033993 GO:0036211 GO:0040007 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045814 GO:0048519 GO:0048577 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048587 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051276 GO:0060255 GO:0060560 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:0140110 GO:1901564 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

JmjC JmjN zf-C2H2

Protein Analysis

1593

Amino Acids

175.93

Weight (kDa)

5.76

Isoelectric Point (pI)

55.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04240
fragaria_vesca	FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090
malus_domestica	MD01G1106000.v1.1 MD07G1172400.v1.1
prunus_persica	Prupe.2G211400_v2.0.a1 Prupe.2G211400_v2.0.a1
pyrus_communis	pycom01g13280 pycom07g16690
rosa_chinensis	RchiOBHm_Chr1g0362971
rosa_laevigata	RLG00000027605
rosa_multiflora	Rmu_sc0000174.1_g000009
rosa_roxburghii	Rroxscaffold_4G00293590
rosa_rugosa	Rorug01G0302900 Rorug01G0303000 Rorug01G0303100 Rorug01G0303200
rosa_samantha	Rh1AG312100 Rh1BG275600 Rh1CG292500 Rh1DG306300
rosa_wichuraiana	Rw1G027660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2304, 2586
AarI	CACCTGC	1 cut(s)	2083
AasI	GACNNNNNNGTC	1 cut(s)	1838
Acc36I	ACCTGC	2 cut(s)	1230, 2083
AccB1I	GGYRCC	5 cut(s)	46, 1462, 2739, 3424, 3859
AccB7I	CCANNNNNTGG	3 cut(s)	331, 3232, 4304
AccBSI	CCGCTC	3 cut(s)	609, 2723, 4681
AccI	GTMKAC	2 cut(s)	1842, 1876
AccII	CGCG	1 cut(s)	1498
AclWI	GGATC	1 cut(s)	2078
AcoI	YGGCCR	3 cut(s)	59, 2526, 4682
AcuI	CTGAAG	7 cut(s)	2910, 3474, 3687, 3777, 3792, 4377, 4705
AcyI	GRCGYC	1 cut(s)	3425
AdeI	CACNNNGTG	1 cut(s)	1676
AfaI	GTAC	6 cut(s)	868, 1380, 2915, 4000, 4324, 4556
AflIII	ACRYGT	3 cut(s)	758, 3691, 4663
AgeI	ACCGGT	1 cut(s)	4366
AjnI	CCWGG	7 cut(s)	925, 1090, 1480, 1966, 2897, 3324, 3634
AleI	CACNNNNGTG	4 cut(s)	2427, 3818, 4572, 4662
Alw21I	GWGCWC	4 cut(s)	3601, 3612, 4659, 4671
Alw26I	GTCTC	5 cut(s)	2140, 3251, 3878, 4288, 4440
Alw44I	GTGCAC	1 cut(s)	4667
AlwI	GGATC	1 cut(s)	2078
AlwNI	CAGNNNCTG	2 cut(s)	533, 3815
Ama87I	CYCGRG	2 cut(s)	572, 961
AoxI	GGCC	9 cut(s)	59, 2256, 2526, 3972, 4277, 4592, 4644, 4682, 4711
ApaI	GGGCCC	1 cut(s)	4648
ApaLI	GTGCAC	1 cut(s)	4667
AsiGI	ACCGGT	1 cut(s)	4366
Asp700I	GAANNNNTTC	7 cut(s)	268, 1122, 2446, 3141, 3660, 3723, 4023
AspLEI	GCGC	1 cut(s)	3427
AsuC2I	CCSGG	6 cut(s)	573, 574, 962, 963, 1674, 2261
AvaI	CYCGRG	2 cut(s)	572, 961
AvaII	GGWCC	7 cut(s)	1470, 2044, 2188, 2397, 2643, 3638, 4173
AxyI	CCTNAGG	1 cut(s)	1206
BaeGI	GKGCMC	5 cut(s)	573, 2742, 4607, 4648, 4671
BanI	GGYRCC	5 cut(s)	46, 1462, 2739, 3424, 3859
BanII	GRGCYC	4 cut(s)	3567, 3601, 3612, 4648
BarI	GAAGNNNNNNTAC	2 cut(s)	1362, 1394
BauI	CACGAG	2 cut(s)	2815, 4098
BbsI	GAAGAC	4 cut(s)	46, 2397, 3462, 3556
Bbv12I	GWGCWC	4 cut(s)	3601, 3612, 4659, 4671
BccI	CCATC	8 cut(s)	272, 284, 1425, 1918, 2633, 3304, 3791, 4063
BceAI	ACGGC	4 cut(s)	2513, 4264, 4557, 4728
BciT130I	CCWGG	7 cut(s)	927, 1092, 1482, 1968, 2899, 3326, 3636
BciVI	GTATCC	3 cut(s)	748, 2880, 3072
BclI	TGATCA	2 cut(s)	687, 1747
BcnI	CCSGG	6 cut(s)	573, 574, 962, 963, 1674, 2261
BcoDI	GTCTC	5 cut(s)	2140, 3251, 3878, 4288, 4440
BfaI	CTAG	9 cut(s)	120, 300, 450, 473, 828, 1160, 3206, 4029, 4080
BfmI	CTRYAG	9 cut(s)	1374, 2100, 2265, 2715, 2748, 3618, 3669, 3816, 3852
BfoI	RGCGCY	1 cut(s)	3428
BfuAI	ACCTGC	2 cut(s)	1230, 2083
BfuI	GTATCC	3 cut(s)	748, 2880, 3072
BglII	AGATCT	2 cut(s)	2338, 2549
Bme18I	GGWCC	7 cut(s)	1470, 2044, 2188, 2397, 2643, 3638, 4173
BmeT110I	CYCGRG	2 cut(s)	572, 961
BmrI	ACTGGG	2 cut(s)	15, 3528
BmsI	GCATC	8 cut(s)	779, 1702, 1931, 2024, 2336, 2789, 3050, 4303
BmuI	ACTGGG	2 cut(s)	15, 3528
BpiI	GAAGAC	4 cut(s)	46, 2397, 3462, 3556
BpmI	CTGGAG	5 cut(s)	774, 3347, 3615, 4092, 4250
Bpu10I	CCTNAGC	1 cut(s)	3764
BpuEI	CTTGAG	3 cut(s)	1941, 2186, 4583
BpuMI	CCSGG	6 cut(s)	573, 574, 962, 963, 1674, 2261
BsaAI	YACGTR	2 cut(s)	1382, 4664
BsaBI	GATNNNNATC	3 cut(s)	692, 1698, 1746
BsaHI	GRCGYC	1 cut(s)	3425
BsaI	GGTCTC	2 cut(s)	2140, 4288
BsaWI	WCCGGW	2 cut(s)	4366, 4673
BsaXI	ACNNNNNCTCC	2 cut(s)	4478, 4508
Bse118I	RCCGGY	1 cut(s)	4366
Bse21I	CCTNAGG	1 cut(s)	1206
Bse3DI	GCAATG	4 cut(s)	152, 3123, 3352, 4126
Bse8I	GATNNNNATC	3 cut(s)	692, 1698, 1746
BseBI	CCWGG	7 cut(s)	927, 1092, 1482, 1968, 2899, 3326, 3636
BseGI	GGATG	9 cut(s)	283, 770, 2572, 2620, 3379, 3985, 4341, 4470, 4712
BseJI	GATNNNNATC	3 cut(s)	692, 1698, 1746
BseMI	GCAATG	4 cut(s)	152, 3123, 3352, 4126
BseRI	GAGGAG	3 cut(s)	2294, 3173, 4373
BseSI	GKGCMC	5 cut(s)	573, 2742, 4607, 4648, 4671
BseX3I	CGGCCG	1 cut(s)	59
BseYI	CCCAGC	2 cut(s)	2510, 4304
BsgI	GTGCAG	2 cut(s)	3404, 3842
Bsh1236I	CGCG	1 cut(s)	1498
Bsh1285I	CGRYCG	1 cut(s)	62
BshFI	GGCC	9 cut(s)	61, 2258, 2528, 3974, 4279, 4594, 4646, 4684, 4713
BshNI	GGYRCC	5 cut(s)	46, 1462, 2739, 3424, 3859
BshTI	ACCGGT	1 cut(s)	4366
BsiEI	CGRYCG	1 cut(s)	62
BsiHKAI	GWGCWC	4 cut(s)	3601, 3612, 4659, 4671
BsiHKCI	CYCGRG	2 cut(s)	572, 961
BslFI	GGGAC	7 cut(s)	612, 1456, 1844, 2493, 2656, 3208, 3702
BsmAI	GTCTC	5 cut(s)	2140, 3251, 3878, 4288, 4440
BsmFI	GGGAC	7 cut(s)	612, 1456, 1844, 2493, 2656, 3208, 3702
BsmI	GAATGC	1 cut(s)	736
BsnI	GGCC	9 cut(s)	61, 2258, 2528, 3974, 4279, 4594, 4646, 4684, 4713
Bso31I	GGTCTC	2 cut(s)	2140, 4288
BsoBI	CYCGRG	2 cut(s)	572, 961
Bsp120I	GGGCCC	1 cut(s)	4644
Bsp1286I	GDGCHC	9 cut(s)	573, 2742, 3567, 3601, 3612, 4607, 4648, 4659, 4671
Bsp143I	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
BspANI	GGCC	9 cut(s)	61, 2258, 2528, 3974, 4279, 4594, 4646, 4684, 4713
BspFNI	CGCG	1 cut(s)	1498
BspHI	TCATGA	1 cut(s)	1030
BspMAI	CTGCAG	5 cut(s)	1378, 2104, 2269, 3622, 3673
BspMI	ACCTGC	2 cut(s)	1230, 2083
BspPI	GGATC	1 cut(s)	2078
BspQI	GCTCTTC	3 cut(s)	582, 616, 3781
BspT107I	GGYRCC	5 cut(s)	46, 1462, 2739, 3424, 3859
BspTNI	GGTCTC	2 cut(s)	2140, 4288
BsrBI	CCGCTC	3 cut(s)	609, 2723, 4681
BsrDI	GCAATG	4 cut(s)	152, 3123, 3352, 4126
BsrFI	RCCGGY	1 cut(s)	4366
BssAI	RCCGGY	1 cut(s)	4366
BssMI	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
BssNAI	GTATAC	1 cut(s)	1877
BssNI	GRCGYC	1 cut(s)	3425
BssSI	CACGAG	2 cut(s)	2815, 4098
BssT1I	CCWWGG	6 cut(s)	896, 1280, 1466, 2150, 3975, 4298
Bst1107I	GTATAC	1 cut(s)	1877
Bst2BI	CACGAG	2 cut(s)	2815, 4098
Bst2UI	CCWGG	7 cut(s)	927, 1092, 1482, 1968, 2899, 3326, 3636
Bst6I	CTCTTC	7 cut(s)	582, 616, 626, 2034, 3781, 4344, 4721
BstACI	GRCGYC	1 cut(s)	3425
BstAPI	GCANNNNNTGC	2 cut(s)	2273, 2796
BstBAI	YACGTR	2 cut(s)	1382, 4664
BstC8I	GCNNGC	6 cut(s)	470, 2172, 2358, 2472, 3238, 4648
BstDSI	CCRYGG	2 cut(s)	1306, 4607
BstEII	GGTNACC	1 cut(s)	490
BstENI	CCTNNNNNAGG	1 cut(s)	2748
BstF5I	GGATG	9 cut(s)	283, 770, 2572, 2620, 3379, 3985, 4341, 4470, 4712
BstFNI	CGCG	1 cut(s)	1498
BstH2I	RGCGCY	1 cut(s)	3428
BstHHI	GCGC	1 cut(s)	3427
BstKTI	GATC	8 cut(s)	690, 1030, 1067, 1510, 1750, 2086, 2341, 2552
BstMAI	GTCTC	5 cut(s)	2140, 3251, 3878, 4288, 4440
BstMBI	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
BstMCI	CGRYCG	1 cut(s)	62
BstNI	CCWGG	7 cut(s)	927, 1092, 1482, 1968, 2899, 3326, 3636
BstNSI	RCATGY	8 cut(s)	472, 762, 997, 1863, 2174, 2221, 2474, 3695
BstPI	GGTNACC	1 cut(s)	490
BstSFI	CTRYAG	9 cut(s)	1374, 2100, 2265, 2715, 2748, 3618, 3669, 3816, 3852
BstSLI	GKGCMC	5 cut(s)	573, 2742, 4607, 4648, 4671
BstSNI	TACGTA	1 cut(s)	1382
BstUI	CGCG	1 cut(s)	1498
BstV2I	GAAGAC	4 cut(s)	46, 2397, 3462, 3556
BstX2I	RGATCY	3 cut(s)	2083, 2338, 2549
BstYI	RGATCY	3 cut(s)	2083, 2338, 2549
BstZ17I	GTATAC	1 cut(s)	1877
BstZI	CGGCCG	1 cut(s)	59
Bsu36I	CCTNAGG	1 cut(s)	1206
BsuI	GTATCC	3 cut(s)	748, 2880, 3072
BsuRI	GGCC	9 cut(s)	61, 2258, 2528, 3974, 4279, 4594, 4646, 4684, 4713
BtgI	CCRYGG	2 cut(s)	1306, 4607
BtsCI	GGATG	9 cut(s)	283, 770, 2572, 2620, 3379, 3985, 4341, 4470, 4712
BtsI	GCAGTG	4 cut(s)	2204, 2949, 3658, 4566
BveI	ACCTGC	2 cut(s)	1230, 2083
Cac8I	GCNNGC	6 cut(s)	470, 2172, 2358, 2472, 3238, 4648
CaiI	CAGNNNCTG	2 cut(s)	533, 3815
CciI	TCATGA	1 cut(s)	1030
CfoI	GCGC	1 cut(s)	3427
Cfr10I	RCCGGY	1 cut(s)	4366
Cfr9I	CCCGGG	2 cut(s)	572, 961
CseI	GACGC	2 cut(s)	73, 2835
CsiI	ACCWGGT	2 cut(s)	925, 1480
Csp6I	GTAC	6 cut(s)	867, 1379, 2914, 3999, 4323, 4555
CspAI	ACCGGT	1 cut(s)	4366
CspCI	CAANNNNNGTGG	2 cut(s)	4314, 4349
CviQI	GTAC	6 cut(s)	867, 1379, 2914, 3999, 4323, 4555
DinI	GGCGCC	1 cut(s)	3426
DpnI	GATC	8 cut(s)	689, 1029, 1066, 1509, 1749, 2085, 2340, 2551
DpnII	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
DraIII	CACNNNGTG	1 cut(s)	1676
DrdI	GACNNNNNNGTC	1 cut(s)	1838
DseDI	GACNNNNNNGTC	1 cut(s)	1838
EaeI	YGGCCR	3 cut(s)	59, 2526, 4682
EagI	CGGCCG	1 cut(s)	59
Eam1104I	CTCTTC	7 cut(s)	582, 616, 626, 2034, 3781, 4344, 4721
EarI	CTCTTC	7 cut(s)	582, 616, 626, 2034, 3781, 4344, 4721
EciI	GGCGGA	4 cut(s)	366, 637, 643, 4499
Ecl136II	GAGCTC	2 cut(s)	3599, 3610
EclXI	CGGCCG	1 cut(s)	59
Eco105I	TACGTA	1 cut(s)	1382
Eco130I	CCWWGG	6 cut(s)	896, 1280, 1466, 2150, 3975, 4298
Eco24I	GRGCYC	4 cut(s)	3567, 3601, 3612, 4648
Eco31I	GGTCTC	2 cut(s)	2140, 4288
Eco32I	GATATC	2 cut(s)	958, 2905
Eco47I	GGWCC	7 cut(s)	1470, 2044, 2188, 2397, 2643, 3638, 4173
Eco52I	CGGCCG	1 cut(s)	59
Eco53kI	GAGCTC	2 cut(s)	3599, 3610
Eco57I	CTGAAG	7 cut(s)	2910, 3474, 3687, 3777, 3792, 4377, 4705
Eco81I	CCTNAGG	1 cut(s)	1206
Eco88I	CYCGRG	2 cut(s)	572, 961
Eco91I	GGTNACC	1 cut(s)	490
EcoICRI	GAGCTC	2 cut(s)	3599, 3610
EcoNI	CCTNNNNNAGG	1 cut(s)	2748
EcoO109I	RGGNCCY	6 cut(s)	1470, 2044, 2257, 2643, 4173, 4593
EcoO65I	GGTNACC	1 cut(s)	490
EcoRI	GAATTC	4 cut(s)	74, 2446, 2809, 4256
EcoRII	CCWGG	7 cut(s)	925, 1090, 1480, 1966, 2897, 3324, 3634
EcoRV	GATATC	2 cut(s)	958, 2905
EcoT14I	CCWWGG	6 cut(s)	896, 1280, 1466, 2150, 3975, 4298
EcoT22I	ATGCAT	4 cut(s)	1105, 2017, 2329, 2476
EcoT38I	GRGCYC	4 cut(s)	3567, 3601, 3612, 4648
EgeI	GGCGCC	1 cut(s)	3426
EheI	GGCGCC	1 cut(s)	3426
ErhI	CCWWGG	6 cut(s)	896, 1280, 1466, 2150, 3975, 4298
FalI	AAGNNNNNCTT	2 cut(s)	4121, 4153
FaqI	GGGAC	7 cut(s)	612, 1456, 1844, 2493, 2656, 3208, 3702
FauI	CCCGC	2 cut(s)	2716, 4655
FbaI	TGATCA	2 cut(s)	687, 1747
FblI	GTMKAC	2 cut(s)	1842, 1876
FokI	GGATG	9 cut(s)	290, 757, 2559, 2627, 3386, 3992, 4328, 4477, 4719
FriOI	GRGCYC	4 cut(s)	3567, 3601, 3612, 4648
FspBI	CTAG	9 cut(s)	120, 300, 450, 473, 828, 1160, 3206, 4029, 4080
GlaI	GCGC	1 cut(s)	3426
GsaI	CCCAGC	2 cut(s)	2514, 4308
GsuI	CTGGAG	5 cut(s)	774, 3347, 3615, 4092, 4250
HaeII	RGCGCY	1 cut(s)	3428
HaeIII	GGCC	9 cut(s)	61, 2258, 2528, 3974, 4279, 4594, 4646, 4684, 4713
HgaI	GACGC	2 cut(s)	73, 2835
HhaI	GCGC	1 cut(s)	3427
Hin1I	GRCGYC	1 cut(s)	3425
Hin6I	GCGC	1 cut(s)	3425
HinP1I	GCGC	1 cut(s)	3425
HincII	GTYRAC	1 cut(s)	1843
HindII	GTYRAC	1 cut(s)	1843
HindIII	AAGCTT	3 cut(s)	881, 2564, 2696
Hpy166II	GTNNAC	8 cut(s)	923, 932, 985, 1843, 1877, 2188, 4336, 4669
Hpy8I	GTNNAC	8 cut(s)	923, 932, 985, 1843, 1877, 2188, 4336, 4669
Hpy99I	CGWCG	1 cut(s)	67
HpyCH4IV	ACGT	6 cut(s)	919, 1020, 1381, 2374, 2957, 4663
HpySE526I	ACGT	6 cut(s)	919, 1020, 1381, 2374, 2957, 4663
Hsp92I	GRCGYC	1 cut(s)	3425
HspAI	GCGC	1 cut(s)	3425
KasI	GGCGCC	1 cut(s)	3424
Ksp22I	TGATCA	2 cut(s)	687, 1747
Kzo9I	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
LguI	GCTCTTC	3 cut(s)	582, 616, 3781
LweI	GCATC	8 cut(s)	779, 1702, 1931, 2024, 2336, 2789, 3050, 4303
MabI	ACCWGGT	2 cut(s)	925, 1480
MaeI	CTAG	9 cut(s)	120, 300, 450, 473, 828, 1160, 3206, 4029, 4080
MaeII	ACGT	6 cut(s)	919, 1020, 1381, 2374, 2957, 4663
MalI	GATC	8 cut(s)	689, 1029, 1066, 1509, 1749, 2085, 2340, 2551
MbiI	CCGCTC	3 cut(s)	609, 2723, 4681
MboI	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
MfeI	CAATTG	1 cut(s)	2271
MflI	RGATCY	3 cut(s)	2083, 2338, 2549
MhlI	GDGCHC	9 cut(s)	573, 2742, 3567, 3601, 3612, 4607, 4648, 4659, 4671
Mly113I	GGCGCC	1 cut(s)	3425
MlyI	GAGTC	3 cut(s)	1838, 3452, 4573
MmeI	TCCRAC	2 cut(s)	857, 2102
Mph1103I	ATGCAT	4 cut(s)	1105, 2017, 2329, 2476
MroXI	GAANNNNTTC	7 cut(s)	268, 1122, 2446, 3141, 3660, 3723, 4023
MspA1I	CMGCKG	3 cut(s)	1426, 3131, 4512
MunI	CAATTG	1 cut(s)	2271
Mva1269I	GAATGC	1 cut(s)	736
MvaI	CCWGG	7 cut(s)	927, 1092, 1482, 1968, 2899, 3326, 3636
MvnI	CGCG	1 cut(s)	1498
NarI	GGCGCC	1 cut(s)	3425
NciI	CCSGG	6 cut(s)	573, 574, 962, 963, 1674, 2261
NdeII	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
NmuCI	GTSAC	7 cut(s)	198, 1270, 3706, 3937, 4369, 4565, 4745
NsiI	ATGCAT	4 cut(s)	1105, 2017, 2329, 2476
NspI	RCATGY	8 cut(s)	472, 762, 997, 1863, 2174, 2221, 2474, 3695
OliI	CACNNNNGTG	4 cut(s)	2427, 3818, 4572, 4662
PaeI	GCATGC	3 cut(s)	472, 2174, 2474
PagI	TCATGA	1 cut(s)	1030
PaqCI	CACCTGC	1 cut(s)	2083
PciI	ACATGT	2 cut(s)	758, 3691
PciSI	GCTCTTC	3 cut(s)	582, 616, 3781
PctI	GAATGC	1 cut(s)	736
PdmI	GAANNNNTTC	7 cut(s)	268, 1122, 2446, 3141, 3660, 3723, 4023
PfeI	GAWTC	9 cut(s)	373, 1228, 1299, 1604, 1661, 1699, 2837, 3359, 3749
PflFI	GACNNNGTC	1 cut(s)	1444
PflMI	CCANNNNNTGG	3 cut(s)	331, 3232, 4304
PfoI	TCCNGGA	1 cut(s)	3324
PinAI	ACCGGT	1 cut(s)	4366
PleI	GAGTC	3 cut(s)	1838, 3452, 4572
PluTI	GGCGCC	1 cut(s)	3428
PpsI	GAGTC	3 cut(s)	1838, 3452, 4572
Ppu21I	YACGTR	2 cut(s)	1382, 4664
PpuMI	RGGWCCY	4 cut(s)	1470, 2044, 2643, 4173
PscI	ACATGT	2 cut(s)	758, 3691
PsiI	TTATAA	2 cut(s)	2304, 2586
Psp124BI	GAGCTC	2 cut(s)	3601, 3612
Psp5II	RGGWCCY	4 cut(s)	1470, 2044, 2643, 4173
Psp6I	CCWGG	7 cut(s)	925, 1090, 1480, 1966, 2897, 3324, 3634
PspEI	GGTNACC	1 cut(s)	490
PspFI	CCCAGC	2 cut(s)	2510, 4304
PspGI	CCWGG	7 cut(s)	925, 1090, 1480, 1966, 2897, 3324, 3634
PspOMI	GGGCCC	1 cut(s)	4644
PspPPI	RGGWCCY	4 cut(s)	1470, 2044, 2643, 4173
PstI	CTGCAG	5 cut(s)	1378, 2104, 2269, 3622, 3673
PstNI	CAGNNNCTG	2 cut(s)	533, 3815
PsuI	RGATCY	3 cut(s)	2083, 2338, 2549
PsyI	GACNNNGTC	1 cut(s)	1444
PvuII	CAGCTG	2 cut(s)	1426, 3131
RsaI	GTAC	6 cut(s)	868, 1380, 2915, 4000, 4324, 4556
RsaNI	GTAC	6 cut(s)	867, 1379, 2914, 3999, 4323, 4555
SacI	GAGCTC	2 cut(s)	3601, 3612
SalI	GTCGAC	1 cut(s)	1841
SapI	GCTCTTC	3 cut(s)	582, 616, 3781
Sau3AI	GATC	8 cut(s)	687, 1027, 1064, 1507, 1747, 2083, 2338, 2549
SchI	GAGTC	3 cut(s)	1838, 3452, 4573
SduI	GDGCHC	9 cut(s)	573, 2742, 3567, 3601, 3612, 4607, 4648, 4659, 4671
SexAI	ACCWGGT	2 cut(s)	925, 1480
SfaNI	GCATC	8 cut(s)	779, 1702, 1931, 2024, 2336, 2789, 3050, 4303
SfcI	CTRYAG	9 cut(s)	1374, 2100, 2265, 2715, 2748, 3618, 3669, 3816, 3852
SfoI	GGCGCC	1 cut(s)	3426
SinI	GGWCC	7 cut(s)	1470, 2044, 2188, 2397, 2643, 3638, 4173
SmaI	CCCGGG	2 cut(s)	574, 963
SmlI	CTYRAG	3 cut(s)	1956, 2165, 4598
SmoI	CTYRAG	3 cut(s)	1956, 2165, 4598
SnaBI	TACGTA	1 cut(s)	1382
SphI	GCATGC	3 cut(s)	472, 2174, 2474
SspDI	GGCGCC	1 cut(s)	3424
SspI	AATATT	4 cut(s)	798, 2678, 3052, 3197
SspMI	CTAG	9 cut(s)	120, 300, 450, 473, 828, 1160, 3206, 4029, 4080
SstI	GAGCTC	2 cut(s)	3601, 3612
StyI	CCWWGG	6 cut(s)	896, 1280, 1466, 2150, 3975, 4298
TaiI	ACGT	6 cut(s)	922, 1023, 1384, 2377, 2960, 4666
TatI	WGTACW	2 cut(s)	2913, 4322
TauI	GCSGC	1 cut(s)	4684
TfiI	GAWTC	9 cut(s)	373, 1228, 1299, 1604, 1661, 1699, 2837, 3359, 3749
TseFI	GTSAC	7 cut(s)	198, 1270, 3706, 3937, 4369, 4565, 4745
Tsp45I	GTSAC	7 cut(s)	198, 1270, 3706, 3937, 4369, 4565, 4745
TspGWI	ACGGA	1 cut(s)	1654
TspMI	CCCGGG	2 cut(s)	572, 961
Tth111I	GACNNNGTC	1 cut(s)	1444
Van91I	CCANNNNNTGG	3 cut(s)	331, 3232, 4304
VneI	GTGCAC	1 cut(s)	4667
VpaK11BI	GGWCC	7 cut(s)	1470, 2044, 2188, 2397, 2643, 3638, 4173
XagI	CCTNNNNNAGG	1 cut(s)	2748
XbaI	TCTAGA	1 cut(s)	4079
XceI	RCATGY	8 cut(s)	472, 762, 997, 1863, 2174, 2221, 2474, 3695
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1727, 3233, 3907
XmaI	CCCGGG	2 cut(s)	572, 961
XmiI	GTMKAC	2 cut(s)	1842, 1876
XmnI	GAANNNNTTC	7 cut(s)	268, 1122, 2446, 3141, 3660, 3723, 4023
XspI	CTAG	9 cut(s)	120, 300, 450, 473, 828, 1160, 3206, 4029, 4080
Zsp2I	ATGCAT	4 cut(s)	1105, 2017, 2329, 2476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.