lysine-specific demethylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04240 |
| fragaria_vesca | FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 |
| malus_domestica | MD01G1106000.v1.1 MD07G1172400.v1.1 |
| prunus_persica | Prupe.2G211400_v2.0.a1 Prupe.2G211400_v2.0.a1 |
| pyrus_communis | pycom01g13280 pycom07g16690 |
| rosa_chinensis | RchiOBHm_Chr1g0362971 |
| rosa_laevigata | RLG00000027605 |
| rosa_multiflora | Rmu_sc0000174.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00293590 |
| rosa_rugosa | Rorug01G0302900 Rorug01G0303000 Rorug01G0303100 Rorug01G0303200 |
| rosa_samantha | Rh1AG312100 Rh1BG275600 Rh1CG292500 Rh1DG306300 |
| rosa_wichuraiana | Rw1G027660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2799 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3627 |
| Acc16I | TGCGCA | 1 cut(s) | 4172 |
| Acc36I | ACCTGC | 2 cut(s) | 1233, 2711 |
| AccB1I | GGYRCC | 4 cut(s) | 46, 321, 3430, 3928 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 331, 4361 |
| AciI | CCGC | 7 cut(s) | 211, 362, 377, 380, 625, 1492, 4570 |
| AclI | AACGTT | 2 cut(s) | 1856, 4841 |
| AclWI | GGATC | 9 cut(s) | 229, 368, 381, 1075, 2046, 2072, 2085, 3058, 3458 |
| AcoI | YGGCCR | 1 cut(s) | 2520 |
| AcuI | CTGAAG | 9 cut(s) | 1922, 1980, 2772, 3219, 3531, 3846, 3861, 4278, 4428 |
| AcvI | CACGTG | 1 cut(s) | 3116 |
| AcyI | GRCGYC | 1 cut(s) | 47 |
| AdeI | CACNNNGTG | 1 cut(s) | 3722 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3658 |
| AhlI | ACTAGT | 1 cut(s) | 3749 |
| AjiI | CACGTC | 1 cut(s) | 862 |
| AleI | CACNNNNGTG | 2 cut(s) | 654, 4632 |
| Alw21I | GWGCWC | 4 cut(s) | 1690, 2739, 4560, 4731 |
| Alw26I | GTCTC | 7 cut(s) | 483, 2134, 3225, 3503, 4113, 4345, 4432 |
| Alw44I | GTGCAC | 2 cut(s) | 4556, 4727 |
| AlwI | GGATC | 9 cut(s) | 229, 368, 381, 1075, 2046, 2072, 2085, 3058, 3458 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 536 |
| Ama87I | CYCGRG | 2 cut(s) | 50, 1849 |
| AoxI | GGCC | 8 cut(s) | 212, 2520, 3706, 4240, 4334, 4652, 4704, 4771 |
| ApaI | GGGCCC | 1 cut(s) | 4708 |
| ApaLI | GTGCAC | 2 cut(s) | 4556, 4727 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1125, 2440, 3729 |
| AspA2I | CCTAGG | 1 cut(s) | 4510 |
| AspLEI | GCGC | 3 cut(s) | 49, 3686, 4173 |
| AspS9I | GGNCC | 9 cut(s) | 213, 659, 2391, 3707, 4241, 4334, 4653, 4704, 4705 |
| AsuC2I | CCSGG | 1 cut(s) | 795 |
| AvaI | CYCGRG | 2 cut(s) | 50, 1849 |
| AvaII | GGWCC | 2 cut(s) | 659, 2391 |
| AvrII | CCTAGG | 1 cut(s) | 4510 |
| AxyI | CCTNAGG | 1 cut(s) | 1209 |
| BaeGI | GKGCMC | 4 cut(s) | 4560, 4667, 4708, 4731 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 1871, 1904, 2928, 2961, 4170, 4203 |
| BamHI | GGATCC | 2 cut(s) | 373, 2077 |
| BanI | GGYRCC | 4 cut(s) | 46, 321, 3430, 3928 |
| BanII | GRGCYC | 1 cut(s) | 4708 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1365, 1397, 1651, 1683 |
| BauI | CACGAG | 1 cut(s) | 3859 |
| BbrPI | CACGTG | 1 cut(s) | 3116 |
| BbsI | GAAGAC | 2 cut(s) | 1530, 1659 |
| Bbv12I | GWGCWC | 4 cut(s) | 1690, 2739, 4560, 4731 |
| BceAI | ACGGC | 6 cut(s) | 1602, 2507, 4090, 4137, 4617, 4780 |
| BciVI | GTATCC | 2 cut(s) | 1717, 1872 |
| BclI | TGATCA | 1 cut(s) | 1750 |
| BcnI | CCSGG | 1 cut(s) | 795 |
| BcoDI | GTCTC | 7 cut(s) | 483, 2134, 3225, 3503, 4113, 4345, 4432 |
| BcuI | ACTAGT | 1 cut(s) | 3749 |
| BfmI | CTRYAG | 9 cut(s) | 1377, 2031, 2259, 2712, 3477, 3648, 3687, 3738, 4519 |
| BfoI | RGCGCY | 1 cut(s) | 50 |
| BfuAI | ACCTGC | 2 cut(s) | 1233, 2711 |
| BfuI | GTATCC | 2 cut(s) | 1717, 1872 |
| BglII | AGATCT | 2 cut(s) | 2347, 2543 |
| BlnI | CCTAGG | 1 cut(s) | 4510 |
| BlpI | GCTNAGC | 1 cut(s) | 207 |
| BmcAI | AGTACT | 2 cut(s) | 1744, 2707 |
| Bme18I | GGWCC | 2 cut(s) | 659, 2391 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3658 |
| BmeT110I | CYCGRG | 2 cut(s) | 50, 1849 |
| BmgBI | CACGTC | 1 cut(s) | 862 |
| BmgT120I | GGNCC | 9 cut(s) | 213, 659, 2391, 3707, 4241, 4334, 4653, 4704, 4705 |
| BmrI | ACTGGG | 1 cut(s) | 3597 |
| BmuI | ACTGGG | 1 cut(s) | 3597 |
| BpiI | GAAGAC | 2 cut(s) | 1530, 1659 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2027, 2059 |
| BpmI | CTGGAG | 6 cut(s) | 294, 1116, 1983, 1992, 3684, 4755 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 207 |
| BpuEI | CTTGAG | 1 cut(s) | 4146 |
| BpuMI | CCSGG | 1 cut(s) | 795 |
| BsaAI | YACGTR | 2 cut(s) | 1385, 3116 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3062, 4391 |
| BsaHI | GRCGYC | 1 cut(s) | 47 |
| BsaI | GGTCTC | 4 cut(s) | 2134, 3225, 4345, 4432 |
| BsaWI | WCCGGW | 1 cut(s) | 595 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 590, 620, 1486, 1516, 2140, 2170, 2615, 2645 |
| Bse1I | ACTGG | 5 cut(s) | 2534, 3434, 3603, 4418, 4738 |
| Bse21I | CCTNAGG | 1 cut(s) | 1209 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3062, 4391 |
| BseJI | GATNNNNATC | 2 cut(s) | 3062, 4391 |
| BseNI | ACTGG | 5 cut(s) | 2534, 3434, 3603, 4418, 4738 |
| BseRI | GAGGAG | 3 cut(s) | 643, 3969, 4559 |
| BseSI | GKGCMC | 4 cut(s) | 4560, 4667, 4708, 4731 |
| BseYI | CCCAGC | 1 cut(s) | 4361 |
| BsgI | GTGCAG | 3 cut(s) | 1043, 1641, 3410 |
| BshFI | GGCC | 8 cut(s) | 214, 2522, 3708, 4242, 4336, 4654, 4706, 4773 |
| BshNI | GGYRCC | 4 cut(s) | 46, 321, 3430, 3928 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1690, 2739, 4560, 4731 |
| BsiHKCI | CYCGRG | 2 cut(s) | 50, 1849 |
| BsiSI | CCGG | 3 cut(s) | 596, 794, 953 |
| BslFI | GGGAC | 2 cut(s) | 1459, 3193 |
| BsmAI | GTCTC | 7 cut(s) | 483, 2134, 3225, 3503, 4113, 4345, 4432 |
| BsmBI | CGTCTC | 2 cut(s) | 483, 4113 |
| BsmFI | GGGAC | 2 cut(s) | 1459, 3193 |
| BsnI | GGCC | 8 cut(s) | 214, 2522, 3708, 4242, 4336, 4654, 4706, 4773 |
| Bso31I | GGTCTC | 4 cut(s) | 2134, 3225, 4345, 4432 |
| BsoBI | CYCGRG | 2 cut(s) | 50, 1849 |
| Bsp120I | GGGCCC | 1 cut(s) | 4704 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1690, 2739, 4560, 4667, 4708, 4731 |
| Bsp1407I | TGTACA | 1 cut(s) | 1782 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 207 |
| Bsp19I | CCATGG | 1 cut(s) | 899 |
| BspACI | CCGC | 7 cut(s) | 211, 362, 377, 380, 625, 1492, 4570 |
| BspANI | GGCC | 8 cut(s) | 214, 2522, 3708, 4242, 4336, 4654, 4706, 4773 |
| BspHI | TCATGA | 2 cut(s) | 1033, 4084 |
| BspMAI | CTGCAG | 5 cut(s) | 1381, 2263, 3481, 3691, 3742 |
| BspMI | ACCTGC | 2 cut(s) | 1233, 2711 |
| BspPI | GGATC | 9 cut(s) | 229, 368, 381, 1075, 2046, 2072, 2085, 3058, 3458 |
| BspQI | GCTCTTC | 2 cut(s) | 1599, 2748 |
| BspT107I | GGYRCC | 4 cut(s) | 46, 321, 3430, 3928 |
| BspTNI | GGTCTC | 4 cut(s) | 2134, 3225, 4345, 4432 |
| BsrGI | TGTACA | 1 cut(s) | 1782 |
| BsrI | ACTGG | 5 cut(s) | 2534, 3434, 3603, 4418, 4738 |
| BssNI | GRCGYC | 1 cut(s) | 47 |
| BssSI | CACGAG | 1 cut(s) | 3859 |
| BssT1I | CCWWGG | 6 cut(s) | 899, 1283, 4026, 4355, 4464, 4510 |
| Bst2BI | CACGAG | 1 cut(s) | 3859 |
| Bst6I | CTCTTC | 6 cut(s) | 629, 1599, 2748, 2988, 4404, 4430 |
| BstACI | GRCGYC | 1 cut(s) | 47 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2267 |
| BstAUI | TGTACA | 1 cut(s) | 1782 |
| BstBAI | YACGTR | 2 cut(s) | 1385, 3116 |
| BstC8I | GCNNGC | 4 cut(s) | 922, 2466, 3034, 4103 |
| BstDSI | CCRYGG | 4 cut(s) | 765, 899, 2144, 4667 |
| BstH2I | RGCGCY | 1 cut(s) | 50 |
| BstHHI | GCGC | 3 cut(s) | 49, 3686, 4173 |
| BstMAI | GTCTC | 7 cut(s) | 483, 2134, 3225, 3503, 4113, 4345, 4432 |
| BstNSI | RCATGY | 7 cut(s) | 1000, 1866, 1875, 2072, 2168, 2215, 2468 |
| BstSFI | CTRYAG | 9 cut(s) | 1377, 2031, 2259, 2712, 3477, 3648, 3687, 3738, 4519 |
| BstSLI | GKGCMC | 4 cut(s) | 4560, 4667, 4708, 4731 |
| BstSNI | TACGTA | 1 cut(s) | 1385 |
| BstV2I | GAAGAC | 2 cut(s) | 1530, 1659 |
| BstX2I | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3063 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 656 |
| BstYI | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3063 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1209 |
| BsuI | GTATCC | 2 cut(s) | 1717, 1872 |
| BsuRI | GGCC | 8 cut(s) | 214, 2522, 3708, 4242, 4336, 4654, 4706, 4773 |
| BtgI | CCRYGG | 4 cut(s) | 765, 899, 2144, 4667 |
| BtgZI | GCGATG | 3 cut(s) | 1833, 3785, 4634 |
| BtrI | CACGTC | 1 cut(s) | 862 |
| BtsI | GCAGTG | 3 cut(s) | 312, 1677, 2198 |
| BtsIMutI | CAGTG | 7 cut(s) | 312, 1131, 1545, 1677, 2198, 4425, 4731 |
| BveI | ACCTGC | 2 cut(s) | 1233, 2711 |
| Cac8I | GCNNGC | 4 cut(s) | 922, 2466, 3034, 4103 |
| CaiI | CAGNNNCTG | 1 cut(s) | 536 |
| CciI | TCATGA | 2 cut(s) | 1033, 4084 |
| CfoI | GCGC | 3 cut(s) | 49, 3686, 4173 |
| Cfr13I | GGNCC | 9 cut(s) | 213, 659, 2391, 3707, 4241, 4334, 4653, 4704, 4705 |
| CseI | GACGC | 3 cut(s) | 1914, 2975, 3296 |
| CsiI | ACCWGGT | 4 cut(s) | 928, 1483, 3931, 4401 |
| DinI | GGCGCC | 1 cut(s) | 48 |
| DraI | TTTAAA | 2 cut(s) | 1569, 2653 |
| DraIII | CACNNNGTG | 1 cut(s) | 3722 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3627 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3658 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3627 |
| EaeI | YGGCCR | 1 cut(s) | 2520 |
| Eam1104I | CTCTTC | 6 cut(s) | 629, 1599, 2748, 2988, 4404, 4430 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3658 |
| EarI | CTCTTC | 6 cut(s) | 629, 1599, 2748, 2988, 4404, 4430 |
| EciI | GGCGGA | 2 cut(s) | 366, 640 |
| Eco105I | TACGTA | 1 cut(s) | 1385 |
| Eco130I | CCWWGG | 6 cut(s) | 899, 1283, 4026, 4355, 4464, 4510 |
| Eco24I | GRGCYC | 1 cut(s) | 4708 |
| Eco31I | GGTCTC | 4 cut(s) | 2134, 3225, 4345, 4432 |
| Eco32I | GATATC | 2 cut(s) | 961, 2902 |
| Eco47I | GGWCC | 2 cut(s) | 659, 2391 |
| Eco57I | CTGAAG | 9 cut(s) | 1922, 1980, 2772, 3219, 3531, 3846, 3861, 4278, 4428 |
| Eco72I | CACGTG | 1 cut(s) | 3116 |
| Eco81I | CCTNAGG | 1 cut(s) | 1209 |
| Eco88I | CYCGRG | 2 cut(s) | 50, 1849 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4241, 4653 |
| EcoRI | GAATTC | 4 cut(s) | 640, 1230, 1702, 3551 |
| EcoRV | GATATC | 2 cut(s) | 961, 2902 |
| EcoT14I | CCWWGG | 6 cut(s) | 899, 1283, 4026, 4355, 4464, 4510 |
| EcoT22I | ATGCAT | 3 cut(s) | 1108, 2470, 2868 |
| EcoT38I | GRGCYC | 1 cut(s) | 4708 |
| EgeI | GGCGCC | 1 cut(s) | 48 |
| EheI | GGCGCC | 1 cut(s) | 48 |
| ErhI | CCWWGG | 6 cut(s) | 899, 1283, 4026, 4355, 4464, 4510 |
| Esp3I | CGTCTC | 2 cut(s) | 483, 4113 |
| FaqI | GGGAC | 2 cut(s) | 1459, 3193 |
| FauI | CCCGC | 1 cut(s) | 355 |
| FauNDI | CATATG | 2 cut(s) | 1141, 2822 |
| FbaI | TGATCA | 1 cut(s) | 1750 |
| FriOI | GRGCYC | 1 cut(s) | 4708 |
| FspI | TGCGCA | 1 cut(s) | 4172 |
| GlaI | GCGC | 3 cut(s) | 48, 3685, 4172 |
| GsaI | CCCAGC | 1 cut(s) | 4365 |
| GsuI | CTGGAG | 6 cut(s) | 294, 1116, 1983, 1992, 3684, 4755 |
| HaeII | RGCGCY | 1 cut(s) | 50 |
| HaeIII | GGCC | 8 cut(s) | 214, 2522, 3708, 4242, 4336, 4654, 4706, 4773 |
| HapII | CCGG | 3 cut(s) | 596, 794, 953 |
| HgaI | GACGC | 3 cut(s) | 1914, 2975, 3296 |
| HhaI | GCGC | 3 cut(s) | 49, 3686, 4173 |
| Hin1I | GRCGYC | 1 cut(s) | 47 |
| Hin6I | GCGC | 3 cut(s) | 47, 3684, 4171 |
| HinP1I | GCGC | 3 cut(s) | 47, 3684, 4171 |
| HincII | GTYRAC | 4 cut(s) | 807, 1846, 2527, 3632 |
| HindII | GTYRAC | 4 cut(s) | 807, 1846, 2527, 3632 |
| HindIII | AAGCTT | 1 cut(s) | 884 |
| HpaI | GTTAAC | 1 cut(s) | 2527 |
| HpaII | CCGG | 3 cut(s) | 596, 794, 953 |
| HpyCH4IV | ACGT | 7 cut(s) | 492, 861, 1023, 1384, 1856, 3115, 4841 |
| HpySE526I | ACGT | 7 cut(s) | 492, 861, 1023, 1384, 1856, 3115, 4841 |
| Hsp92I | GRCGYC | 1 cut(s) | 47 |
| HspAI | GCGC | 3 cut(s) | 47, 3684, 4171 |
| KasI | GGCGCC | 1 cut(s) | 46 |
| Ksp22I | TGATCA | 1 cut(s) | 1750 |
| KspAI | GTTAAC | 1 cut(s) | 2527 |
| LguI | GCTCTTC | 2 cut(s) | 1599, 2748 |
| LmnI | GCTCC | 8 cut(s) | 468, 1693, 2182, 2204, 2257, 2717, 4149, 4685 |
| MabI | ACCWGGT | 4 cut(s) | 928, 1483, 3931, 4401 |
| MaeII | ACGT | 7 cut(s) | 492, 861, 1023, 1384, 1856, 3115, 4841 |
| MfeI | CAATTG | 4 cut(s) | 87, 1318, 3181, 3291 |
| MflI | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3063 |
| MhlI | GDGCHC | 6 cut(s) | 1690, 2739, 4560, 4667, 4708, 4731 |
| Mly113I | GGCGCC | 1 cut(s) | 47 |
| MlyI | GAGTC | 9 cut(s) | 452, 1673, 1841, 2466, 2831, 2906, 3047, 3505, 3633 |
| MmeI | TCCRAC | 7 cut(s) | 86, 860, 2096, 2814, 3491, 4243, 4335 |
| Mph1103I | ATGCAT | 3 cut(s) | 1108, 2470, 2868 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1125, 2440, 3729 |
| MspA1I | CMGCKG | 6 cut(s) | 1008, 1429, 2954, 3482, 4503, 4572 |
| MspI | CCGG | 3 cut(s) | 596, 794, 953 |
| MunI | CAATTG | 4 cut(s) | 87, 1318, 3181, 3291 |
| NarI | GGCGCC | 1 cut(s) | 47 |
| NciI | CCSGG | 1 cut(s) | 795 |
| NcoI | CCATGG | 1 cut(s) | 899 |
| NdeI | CATATG | 2 cut(s) | 1141, 2822 |
| NmuCI | GTSAC | 9 cut(s) | 198, 1203, 1273, 1307, 2588, 3295, 3871, 4021, 4806 |
| NsbI | TGCGCA | 1 cut(s) | 4172 |
| NsiI | ATGCAT | 3 cut(s) | 1108, 2470, 2868 |
| NspI | RCATGY | 7 cut(s) | 1000, 1866, 1875, 2072, 2168, 2215, 2468 |
| OliI | CACNNNNGTG | 2 cut(s) | 654, 4632 |
| PaeI | GCATGC | 1 cut(s) | 2468 |
| PagI | TCATGA | 2 cut(s) | 1033, 4084 |
| PasI | CCCWGGG | 1 cut(s) | 239 |
| PciSI | GCTCTTC | 2 cut(s) | 1599, 2748 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1232 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1125, 2440, 3729 |
| PfeI | GAWTC | 8 cut(s) | 1255, 1302, 1607, 1633, 2012, 3365, 3577, 3818 |
| PflFI | GACNNNGTC | 2 cut(s) | 1447, 4251 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 331, 4361 |
| PfoI | TCCNGGA | 1 cut(s) | 1093 |
| PleI | GAGTC | 9 cut(s) | 451, 1672, 1841, 2465, 2831, 2906, 3046, 3505, 3632 |
| PluTI | GGCGCC | 1 cut(s) | 50 |
| PmaCI | CACGTG | 1 cut(s) | 3116 |
| PmlI | CACGTG | 1 cut(s) | 3116 |
| PpsI | GAGTC | 9 cut(s) | 451, 1672, 1841, 2465, 2831, 2906, 3046, 3505, 3632 |
| Ppu21I | YACGTR | 2 cut(s) | 1385, 3116 |
| PsiI | TTATAA | 1 cut(s) | 2799 |
| Psp1406I | AACGTT | 2 cut(s) | 1856, 4841 |
| PspCI | CACGTG | 1 cut(s) | 3116 |
| PspFI | CCCAGC | 1 cut(s) | 4361 |
| PspOMI | GGGCCC | 1 cut(s) | 4704 |
| PspPI | GGNCC | 9 cut(s) | 213, 659, 2391, 3707, 4241, 4334, 4653, 4704, 4705 |
| PstI | CTGCAG | 5 cut(s) | 1381, 2263, 3481, 3691, 3742 |
| PstNI | CAGNNNCTG | 1 cut(s) | 536 |
| PsuI | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3063 |
| PsyI | GACNNNGTC | 2 cut(s) | 1447, 4251 |
| PvuII | CAGCTG | 5 cut(s) | 1008, 1429, 2954, 3482, 4503 |
| SapI | GCTCTTC | 2 cut(s) | 1599, 2748 |
| Sau96I | GGNCC | 9 cut(s) | 213, 659, 2391, 3707, 4241, 4334, 4653, 4704, 4705 |
| ScaI | AGTACT | 2 cut(s) | 1744, 2707 |
| SchI | GAGTC | 9 cut(s) | 452, 1673, 1841, 2466, 2831, 2906, 3047, 3505, 3633 |
| SduI | GDGCHC | 6 cut(s) | 1690, 2739, 4560, 4667, 4708, 4731 |
| SexAI | ACCWGGT | 4 cut(s) | 928, 1483, 3931, 4401 |
| SfcI | CTRYAG | 9 cut(s) | 1377, 2031, 2259, 2712, 3477, 3648, 3687, 3738, 4519 |
| SfoI | GGCGCC | 1 cut(s) | 48 |
| SinI | GGWCC | 2 cut(s) | 659, 2391 |
| SmlI | CTYRAG | 1 cut(s) | 4161 |
| SmoI | CTYRAG | 1 cut(s) | 4161 |
| SnaBI | TACGTA | 1 cut(s) | 1385 |
| SpeI | ACTAGT | 1 cut(s) | 3749 |
| SphI | GCATGC | 1 cut(s) | 2468 |
| SsiI | CCGC | 7 cut(s) | 211, 362, 377, 380, 625, 1492, 4570 |
| SspDI | GGCGCC | 1 cut(s) | 46 |
| SspI | AATATT | 1 cut(s) | 2678 |
| StyI | CCWWGG | 6 cut(s) | 899, 1283, 4026, 4355, 4464, 4510 |
| TaiI | ACGT | 7 cut(s) | 495, 864, 1026, 1387, 1859, 3118, 4844 |
| TaqI | TCGA | 4 cut(s) | 101, 1442, 2358, 2450 |
| TaqII | GACCGA | 1 cut(s) | 3617 |
| TatI | WGTACW | 4 cut(s) | 1742, 1782, 1949, 2705 |
| TauI | GCSGC | 2 cut(s) | 214, 382 |
| TfiI | GAWTC | 8 cut(s) | 1255, 1302, 1607, 1633, 2012, 3365, 3577, 3818 |
| TscAI | CASTG | 7 cut(s) | 312, 1138, 1545, 1684, 2198, 4425, 4738 |
| TseFI | GTSAC | 9 cut(s) | 198, 1203, 1273, 1307, 2588, 3295, 3871, 4021, 4806 |
| Tsp45I | GTSAC | 9 cut(s) | 198, 1203, 1273, 1307, 2588, 3295, 3871, 4021, 4806 |
| TspGWI | ACGGA | 5 cut(s) | 754, 1224, 1736, 2161, 4829 |
| TspRI | CASTG | 7 cut(s) | 312, 1138, 1545, 1684, 2198, 4425, 4738 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1447, 4251 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 331, 4361 |
| VneI | GTGCAC | 2 cut(s) | 4556, 4727 |
| VpaK11BI | GGWCC | 2 cut(s) | 659, 2391 |
| XbaI | TCTAGA | 1 cut(s) | 2537 |
| XceI | RCATGY | 7 cut(s) | 1000, 1866, 1875, 2072, 2168, 2215, 2468 |
| XmaJI | CCTAGG | 1 cut(s) | 4510 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1125, 2440, 3729 |
| ZrmI | AGTACT | 2 cut(s) | 1744, 2707 |
| Zsp2I | ATGCAT | 3 cut(s) | 1108, 2470, 2868 |