Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0002819

Physical Location & Seq

Genomic Coordinates Forward (+)

17600483 .. 17604449

Gene Structure 3967 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g22310.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGAGACTGCCTTCCAGGAGATGACTATCAATGCGTTGAAAACTTATGGAAGAGACCTTATTGAACAAGCAGCAAAGTTTGACCCAGTTATTGGCCGAGACCAAGAAATAAGGCAGGTTATTCAGAATCTCTCAAGGAGAACAAAGAACAATCCAATGCTTGTTGGAGAACCAGGAGTTGGAAAAACTGCTGTAGTTGAAGGCTTGGCTCAGAGGATATTAAGAGGTGATGTCCCTAGTACTCTTGCCAATGTGAGGATCATAGAATTGGATATGGGTGCTTTGCTGGCCGGGGCACAGTATAGAGGACAATTTGAGGAGAGGTTAAAGGCTGTTTTGAATGAAGTGGAAGCGGCTCAAGGGAAGGTGATTCTATTCATTGATGAGATTCACCTTGTTCTTGGTGCTGGTAGAGTTAAGGGGTCTAATATGGATGCTGCCAACCTCTTTAAGCCAATGCTTGCTAGAGGTCAGCTGAGGTGCATTGGTGCAACAACCCTTGAAGAGTACCGGAAATATGTAGAAAAGGATGCTGCATTTGAGAGAAGGTTCCAAAAGATTATTGTGGCTGAACCTAGTGTTGAGGACACAGTTAGTATCCTTCGAGGGCTGAAAGAGAGATATGAAAGTCATCATGGTGTGCGAATTTTGGACCGTGCCCTGGTTGTTGCTGCAGAACTTTCAAGCCGGTACATCACAGGCAGACGTCTTCCTGACAAGGCAATTGATCTAGTTGATGAAGCTTGTGCAAATGTGAGAGTCCGGCTTGATAGTCGGCCTGAAGAGATTGACAACATTGAAAGAAAGATAATGCAGCTGAAAGTTGAGGTTCATGCACTTGAAAAAGAGAAGGACAAAAGTAGCAAAGCTCGTCTTGTTGAAGTGAGAAAAGAGCTTGATGACTTGAGAGACAAACTGCAGCCTTTGATGATCAAATATCGAAACGAGAAGGAAAAGGTTGATGAAACTCAACGGTTTAAGCAGAAGCGAGAAAAACTGTTACTTGCTTTAGCACAGGCTGAAAGAAGAGGTGATTTTGCCAAGGTTGCTGACTTACGTTATGGAGCTATTCAGGAATTGGAAACTGCTGTCGCACAGCTTGAATTGAACAGCAATAACAACTTGATGCTGACAACAGCTGTTTCACCAGAGCATATAGCAGAGGTTGTGAGCCGTTCCACTGGCATACCTATCACAAGGCTAGACCAGAATGGCAAAGAGAGGCTAATTGGACTTGCTGAGAGGCTGCATAAAAGAGTAGTGGGTCAAGAACAGGCAGTTGCTGCTGTTTCTGAGGCGGTTTTGAGGTCAAGAGCTGGGCTAGGAAGGCAAGAACAACCAACTGGCTCATTCCTATTCTTGGGTCCAACCGGTGTCGGTAAAACTGAGCTTGCAAAGGCTCTAGCTGAGCAACTTTTTGATGATGAAAATCTAATTGTGAGACTAGACATGTCTGAGTACCTTTCTGAAAATTCTCTTTCGCGCTTGATTGGTGCTCCTCCAGGGTATGCTGGTCATGATGAAGGTGGCCAACTGACAGAGGCCGTGAGACGGAGACCCTATAGTGTTGTATTATTTGATGAAGTGGAAAAGGCACACACCTCCATTTTCAACATTCTCCTGCAAGTATTAGACGATGGAAGGTTAACTGACGCCCAAGGTCATGTTGTAGACTTCAAGAACACTATGATTATCATGACCTCTAACCTTGGAGCAAAACATCTCCTGTCTGGTTTAGTGGGAGAGTGTTCAATGCAAGTTGCTCGTGATAGAGTTATGCCAGAGGTGAGAAGTCACTTTAGTCCTGAGTTCCTAAATCGGCTTGATGAGATTGTCATATTTGATCCTCTTTCATATGAGCAAGTAAAGAAGGTGGCTAGATTGCAAATGAAGGATGTTATTAACCGACTTTCTGAGAGAGGTGTTGCTTTGGAATTGACTGATGCAGCATTGAATTATATTATGCATAAGAGTTATGATCCGGCTTATGGTGCTAGACCAATTAGGAGATGGCTTGAAAAGAAGGTGGTGACAGAGTTGTCAAGAATGCTGGTAGGAGAAGAGATGGATGAGAACTCGACTGTTTATATAGATGCAGGGCCATATGGAAGTGAGTTGGTGTATCGAGTCGAAAAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006417 GO:0006950 GO:0006979 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032268 GO:0032270 GO:0033554 GO:0034248 GO:0034250 GO:0034605 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043335 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:1901700 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

AAA AAA_2 ClpB_D2-small Clp_N

Protein Analysis

714

Amino Acids

80.15

Weight (kDa)

6.4

Isoelectric Point (pI)

37.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_16	PF13191	30 - 118	4.9e-07	AAA ATPase domain
NBD_SMAX1	PF23569	35 - 135	1.1e-08	SMAX1 nucleotide binding domain
AAA	PF00004	53 - 188	1.6e-13	ATPase family associated with various cellular activities (AAA)
AAA_lid_9	PF17871	193 - 293	1.9e-35	AAA lid domain
AAA_2	PF07724	447 - 611	1.5e-64	AAA domain (Cdc48 subfamily)
AAA_5	PF07728	451 - 571	2.4e-13	AAA domain (dynein-related subfamily)
AAA	PF00004	452 - 585	4.5e-09	ATPase family associated with various cellular activities (AAA)
ClpB_D2-small	PF10431	617 - 696	1.2e-21	C-terminal, D2-small domain, of ClpB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74310 AT1G74310 AT4G14670
fragaria_vesca	FvH4_5g14020 FvH4_5g14020 FvH4_5g14020 FvH4_5g14020 FvH4_7g22310 FvH4_7g22310 FvH4_7g22310
malus_domestica	MD06G1201600.v1.1 MD14G1210600.v1.1 MD14G1211000.v1.1
prunus_persica	Prupe.5G203700_v2.0.a1
pyrus_communis	pycom06g17750 pycom14g17400
rosa_chinensis	RchiOBHm_Chr1g0366791 RchiOBHm_Chr7g0182871 RchiOBHm_Chr7g0182901
rosa_laevigata	RLG00000005096 RLG00000005098 RLG00000027319
rosa_multiflora	Rmu_sc0000014.1_g000026 Rmu_sc0000318.1_g000026
rosa_roxburghii	Rroxscaffold_3G00230950 Rroxscaffold_3G00270960
rosa_rugosa	Rorug01G0331900 Rorug01G0333200 Rorug06G0451000
rosa_samantha	Rh1AG340000 Rh7AG054200 Rh7AG403300 Rh7BG053700 Rh7CG055300 Rh7DG053500 Rh7DG053600
rosa_wichuraiana	Rw0G008600 Rw1G030200 Rw7G004420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2038
AatII	GACGTC	1 cut(s)	709
Acc36I	ACCTGC	1 cut(s)	106
AccB7I	CCANNNNNTGG	2 cut(s)	92, 179
AccI	GTMKAC	1 cut(s)	1671
AccII	CGCG	1 cut(s)	1483
AciI	CCGC	2 cut(s)	353, 1298
AclWI	GGATC	3 cut(s)	266, 1838, 1973
AcoI	YGGCCR	3 cut(s)	94, 288, 1528
AcsI	RAATTY	2 cut(s)	645, 1471
AcuI	CTGAAG	1 cut(s)	801
AcyI	GRCGYC	2 cut(s)	706, 1653
AfaI	GTAC	4 cut(s)	241, 509, 692, 1460
AfiI	CCNNNNNNNGG	7 cut(s)	92, 179, 255, 661, 1360, 1551, 1988
AflIII	ACRYGT	1 cut(s)	1449
AgeI	ACCGGT	1 cut(s)	1370
AjnI	CCWGG	4 cut(s)	15, 172, 660, 1501
AjuI	GAANNNNNNNTTGG	2 cut(s)	162, 194
Alw21I	GWGCWC	1 cut(s)	1498
Alw26I	GTCTC	6 cut(s)	48, 93, 903, 1435, 1543, 1549
AlwI	GGATC	3 cut(s)	266, 1838, 1973
AlwNI	CAGNNNCTG	1 cut(s)	1283
AoxI	GGCC	6 cut(s)	94, 288, 776, 1528, 1542, 2099
ApeKI	GCWGC	9 cut(s)	71, 437, 533, 671, 814, 919, 1246, 1283, 1946
ApoI	RAATTY	2 cut(s)	645, 1471
AsiGI	ACCGGT	1 cut(s)	1370
AspLEI	GCGC	1 cut(s)	1485
AspS9I	GGNCC	3 cut(s)	652, 1364, 2099
AsuC2I	CCSGG	1 cut(s)	292
AsuHPI	GGTGA	7 cut(s)	239, 379, 383, 1043, 1137, 1798, 2041
AvaII	GGWCC	2 cut(s)	652, 1364
BaeGI	GKGCMC	2 cut(s)	298, 661
BalI	TGGCCA	1 cut(s)	1530
BauI	CACGAG	1 cut(s)	1764
BbsI	GAAGAC	1 cut(s)	701
Bbv12I	GWGCWC	1 cut(s)	1498
BbvCI	CCTCAGC	1 cut(s)	476
BbvI	GCAGC	9 cut(s)	83, 424, 520, 658, 826, 931, 1233, 1270, 1958
BccI	CCATC	3 cut(s)	1631, 2004, 2059
BceAI	ACGGC	2 cut(s)	1158, 1529
BcgI	CGANNNNNNTGC	2 cut(s)	1745, 1779
BciT130I	CCWGG	4 cut(s)	17, 174, 662, 1503
BciVI	GTATCC	1 cut(s)	608
BclI	TGATCA	1 cut(s)	930
BcnI	CCSGG	1 cut(s)	292
BcoDI	GTCTC	6 cut(s)	48, 93, 903, 1435, 1543, 1549
BfmI	CTRYAG	4 cut(s)	192, 672, 917, 1561
BfuAI	ACCTGC	1 cut(s)	106
BfuI	GTATCC	1 cut(s)	608
BlpI	GCTNAGC	1 cut(s)	1407
BmcAI	AGTACT	1 cut(s)	241
Bme1390I	CCNGG	5 cut(s)	17, 174, 292, 662, 1503
Bme18I	GGWCC	2 cut(s)	652, 1364
BmgT120I	GGNCC	3 cut(s)	652, 1364, 2099
BmiI	GGNNCC	2 cut(s)	551, 1365
BmrFI	CCNGG	5 cut(s)	17, 174, 292, 662, 1503
BmrI	ACTGGG	1 cut(s)	80
BmsI	GCATC	5 cut(s)	424, 520, 1116, 1933, 2083
BmuI	ACTGGG	1 cut(s)	80
BpiI	GAAGAC	1 cut(s)	701
BpmI	CTGGAG	1 cut(s)	1485
Bpu10I	CCTNAGC	1 cut(s)	476
Bpu1102I	GCTNAGC	1 cut(s)	1407
BpuEI	CTTGAG	3 cut(s)	118, 342, 925
BpuMI	CCSGG	1 cut(s)	292
BsaBI	GATNNNNATC	2 cut(s)	26, 1428
BsaHI	GRCGYC	2 cut(s)	706, 1653
BsaI	GGTCTC	3 cut(s)	48, 93, 1549
BsaJI	CCNNGG	6 cut(s)	291, 660, 1041, 1502, 1657, 1708
BsaWI	WCCGGW	2 cut(s)	510, 1370
Bsc4I	CCNNNNNNNGG	7 cut(s)	92, 179, 255, 661, 1360, 1551, 1988
Bse118I	RCCGGY	2 cut(s)	687, 1370
Bse1I	ACTGG	3 cut(s)	86, 1186, 1348
Bse8I	GATNNNNATC	2 cut(s)	26, 1428
BseBI	CCWGG	4 cut(s)	17, 174, 662, 1503
BseDI	CCNNGG	6 cut(s)	291, 660, 1041, 1502, 1657, 1708
BseGI	GGATG	4 cut(s)	439, 535, 1900, 2074
BseJI	GATNNNNATC	2 cut(s)	26, 1428
BseLI	CCNNNNNNNGG	7 cut(s)	92, 179, 255, 661, 1360, 1551, 1988
BseMII	CTCAG	9 cut(s)	224, 467, 1230, 1284, 1377, 1398, 1446, 1797, 1905
BseNI	ACTGG	3 cut(s)	86, 1186, 1348
BseRI	GAGGAG	2 cut(s)	332, 1488
BseSI	GKGCMC	2 cut(s)	298, 661
BseXI	GCAGC	9 cut(s)	83, 424, 520, 658, 826, 931, 1233, 1270, 1958
BseYI	CCCAGC	1 cut(s)	1316
Bsh1236I	CGCG	1 cut(s)	1483
BshFI	GGCC	6 cut(s)	96, 290, 778, 1530, 1544, 2101
BshTI	ACCGGT	1 cut(s)	1370
BsiHKAI	GWGCWC	1 cut(s)	1498
BsiSI	CCGG	6 cut(s)	291, 511, 688, 763, 1371, 1982
BslFI	GGGAC	1 cut(s)	218
BslI	CCNNNNNNNGG	7 cut(s)	92, 179, 255, 661, 1360, 1551, 1988
BsmAI	GTCTC	6 cut(s)	48, 93, 903, 1435, 1543, 1549
BsmBI	CGTCTC	1 cut(s)	1543
BsmFI	GGGAC	1 cut(s)	218
BsmI	GAATGC	1 cut(s)	2052
BsnI	GGCC	6 cut(s)	96, 290, 778, 1530, 1544, 2101
Bso31I	GGTCTC	3 cut(s)	48, 93, 1549
Bsp1286I	GDGCHC	3 cut(s)	298, 661, 1498
Bsp143I	GATC	5 cut(s)	258, 727, 930, 1843, 1978
Bsp1720I	GCTNAGC	1 cut(s)	1407
BspACI	CCGC	2 cut(s)	353, 1298
BspANI	GGCC	6 cut(s)	96, 290, 778, 1530, 1544, 2101
BspCNI	CTCAG	9 cut(s)	223, 468, 1231, 1285, 1378, 1399, 1447, 1798, 1906
BspFNI	CGCG	1 cut(s)	1483
BspHI	TCATGA	2 cut(s)	1516, 1695
BspLI	GGNNCC	2 cut(s)	551, 1365
BspMAI	CTGCAG	2 cut(s)	676, 921
BspMI	ACCTGC	1 cut(s)	106
BspPI	GGATC	3 cut(s)	266, 1838, 1973
BspTNI	GGTCTC	3 cut(s)	48, 93, 1549
BsrFI	RCCGGY	2 cut(s)	687, 1370
BsrI	ACTGG	3 cut(s)	86, 1186, 1348
BssAI	RCCGGY	2 cut(s)	687, 1370
BssECI	CCNNGG	6 cut(s)	291, 660, 1041, 1502, 1657, 1708
BssMI	GATC	5 cut(s)	258, 727, 930, 1843, 1978
BssNI	GRCGYC	2 cut(s)	706, 1653
BssSI	CACGAG	1 cut(s)	1764
BssT1I	CCWWGG	3 cut(s)	1041, 1657, 1708
Bst2BI	CACGAG	1 cut(s)	1764
Bst2UI	CCWGG	4 cut(s)	17, 174, 662, 1503
Bst4CI	ACNGT	6 cut(s)	300, 592, 656, 975, 999, 2083
Bst6I	CTCTTC	5 cut(s)	46, 498, 777, 1021, 2055
BstACI	GRCGYC	2 cut(s)	706, 1653
BstAPI	GCANNNNNTGC	1 cut(s)	1283
BstC8I	GCNNGC	3 cut(s)	288, 462, 1392
BstDEI	CTNAG	9 cut(s)	210, 476, 1239, 1293, 1386, 1407, 1455, 1806, 1914
BstF5I	GGATG	4 cut(s)	439, 535, 1900, 2074
BstFNI	CGCG	1 cut(s)	1483
BstHHI	GCGC	1 cut(s)	1485
BstKTI	GATC	5 cut(s)	261, 730, 933, 1846, 1981
BstMAI	GTCTC	6 cut(s)	48, 93, 903, 1435, 1543, 1549
BstMBI	GATC	5 cut(s)	258, 727, 930, 1843, 1978
BstMWI	GCNNNNNNNGC	5 cut(s)	287, 1046, 1283, 1327, 1991
BstNI	CCWGG	4 cut(s)	17, 174, 662, 1503
BstNSI	RCATGY	1 cut(s)	1453
BstSCI	CCNGG	5 cut(s)	15, 172, 290, 660, 1501
BstSFI	CTRYAG	4 cut(s)	192, 672, 917, 1561
BstSLI	GKGCMC	2 cut(s)	298, 661
BstUI	CGCG	1 cut(s)	1483
BstV1I	GCAGC	9 cut(s)	83, 424, 520, 658, 826, 931, 1233, 1270, 1958
BstV2I	GAAGAC	1 cut(s)	701
BsuI	GTATCC	1 cut(s)	608
BsuRI	GGCC	6 cut(s)	96, 290, 778, 1530, 1544, 2101
BtsCI	GGATG	4 cut(s)	439, 535, 1900, 2074
BtsIMutI	CAGTG	1 cut(s)	1179
BveI	ACCTGC	1 cut(s)	106
Cac8I	GCNNGC	3 cut(s)	288, 462, 1392
CaiI	CAGNNNCTG	1 cut(s)	1283
CciI	TCATGA	2 cut(s)	1516, 1695
CfoI	GCGC	1 cut(s)	1485
Cfr10I	RCCGGY	2 cut(s)	687, 1370
Cfr13I	GGNCC	3 cut(s)	652, 1364, 2099
CseI	GACGC	1 cut(s)	1661
Csp6I	GTAC	4 cut(s)	240, 508, 691, 1459
CspAI	ACCGGT	1 cut(s)	1370
CviAII	CATG	6 cut(s)	635, 833, 1450, 1517, 1664, 1696
CviQI	GTAC	4 cut(s)	240, 508, 691, 1459
DdeI	CTNAG	9 cut(s)	210, 476, 1239, 1293, 1386, 1407, 1455, 1806, 1914
DpnI	GATC	5 cut(s)	260, 729, 932, 1845, 1980
DpnII	GATC	5 cut(s)	258, 727, 930, 1843, 1978
DrdI	GACNNNNNNGTC	1 cut(s)	2038
DseDI	GACNNNNNNGTC	1 cut(s)	2038
EaeI	YGGCCR	3 cut(s)	94, 288, 1528
Eam1104I	CTCTTC	5 cut(s)	46, 498, 777, 1021, 2055
EarI	CTCTTC	5 cut(s)	46, 498, 777, 1021, 2055
Eco130I	CCWWGG	3 cut(s)	1041, 1657, 1708
Eco31I	GGTCTC	3 cut(s)	48, 93, 1549
Eco47I	GGWCC	2 cut(s)	652, 1364
Eco57I	CTGAAG	1 cut(s)	801
EcoRII	CCWGG	4 cut(s)	15, 172, 660, 1501
EcoT14I	CCWWGG	3 cut(s)	1041, 1657, 1708
EcoT22I	ATGCAT	1 cut(s)	1968
ErhI	CCWWGG	3 cut(s)	1041, 1657, 1708
Esp3I	CGTCTC	1 cut(s)	1543
FaeI	CATG	6 cut(s)	638, 836, 1453, 1520, 1667, 1699
FalI	AAGNNNNNCTT	2 cut(s)	858, 890
FaqI	GGGAC	1 cut(s)	218
FatI	CATG	6 cut(s)	634, 832, 1449, 1516, 1663, 1695
FauNDI	CATATG	2 cut(s)	1855, 2104
FbaI	TGATCA	1 cut(s)	930
FblI	GTMKAC	1 cut(s)	1671
FokI	GGATG	4 cut(s)	446, 542, 1907, 2081
GlaI	GCGC	1 cut(s)	1484
GsaI	CCCAGC	1 cut(s)	1320
GsuI	CTGGAG	1 cut(s)	1485
HaeIII	GGCC	6 cut(s)	96, 290, 778, 1530, 1544, 2101
HapII	CCGG	6 cut(s)	291, 511, 688, 763, 1371, 1982
HgaI	GACGC	1 cut(s)	1661
HhaI	GCGC	1 cut(s)	1485
Hin1I	GRCGYC	2 cut(s)	706, 1653
Hin1II	CATG	6 cut(s)	638, 836, 1453, 1520, 1667, 1699
Hin6I	GCGC	1 cut(s)	1483
HinP1I	GCGC	1 cut(s)	1483
HincII	GTYRAC	1 cut(s)	1647
HindII	GTYRAC	1 cut(s)	1647
HindIII	AAGCTT	1 cut(s)	741
HinfI	GANTC	5 cut(s)	127, 370, 388, 759, 2127
HpaI	GTTAAC	1 cut(s)	1647
HpaII	CCGG	6 cut(s)	291, 511, 688, 763, 1371, 1982
HphI	GGTGA	7 cut(s)	239, 379, 383, 1043, 1137, 1798, 2041
Hpy166II	GTNNAC	2 cut(s)	1647, 1672
Hpy188I	TCNGA	6 cut(s)	126, 213, 1294, 1456, 1468, 1915
Hpy8I	GTNNAC	2 cut(s)	1647, 1672
HpyCH4III	ACNGT	6 cut(s)	300, 592, 656, 975, 999, 2083
HpyCH4IV	ACGT	2 cut(s)	706, 1057
HpyF10VI	GCNNNNNNNGC	5 cut(s)	287, 1046, 1283, 1327, 1991
HpyF3I	CTNAG	9 cut(s)	210, 476, 1239, 1293, 1386, 1407, 1455, 1806, 1914
HpySE526I	ACGT	2 cut(s)	706, 1057
Hsp92I	GRCGYC	2 cut(s)	706, 1653
Hsp92II	CATG	6 cut(s)	638, 836, 1453, 1520, 1667, 1699
HspAI	GCGC	1 cut(s)	1483
Ksp22I	TGATCA	1 cut(s)	930
KspAI	GTTAAC	1 cut(s)	1647
Kzo9I	GATC	5 cut(s)	258, 727, 930, 1843, 1978
LmnI	GCTCC	3 cut(s)	1064, 1501, 1712
Lsp1109I	GCAGC	9 cut(s)	83, 424, 520, 658, 826, 931, 1233, 1270, 1958
LweI	GCATC	5 cut(s)	424, 520, 1116, 1933, 2083
MaeII	ACGT	2 cut(s)	706, 1057
MaeIII	GTNAC	3 cut(s)	999, 1793, 2029
MalI	GATC	5 cut(s)	260, 729, 932, 1845, 1980
MboI	GATC	5 cut(s)	258, 727, 930, 1843, 1978
MboII	GAAGA	6 cut(s)	63, 515, 701, 794, 1038, 2072
MfeI	CAATTG	1 cut(s)	723
MhlI	GDGCHC	3 cut(s)	298, 661, 1498
MlsI	TGGCCA	1 cut(s)	1530
MluNI	TGGCCA	1 cut(s)	1530
MlyI	GAGTC	2 cut(s)	768, 2136
MmeI	TCCRAC	3 cut(s)	145, 160, 1391
Mox20I	TGGCCA	1 cut(s)	1530
Mph1103I	ATGCAT	1 cut(s)	1968
MscI	TGGCCA	1 cut(s)	1530
MseI	TTAA	7 cut(s)	221, 326, 417, 450, 978, 1646, 1902
MslI	CAYNNNNRTG	1 cut(s)	636
Msp20I	TGGCCA	1 cut(s)	1530
MspA1I	CMGCKG	3 cut(s)	475, 817, 1139
MspI	CCGG	6 cut(s)	291, 511, 688, 763, 1371, 1982
MspR9I	CCNGG	5 cut(s)	17, 174, 292, 662, 1503
MunI	CAATTG	1 cut(s)	723
Mva1269I	GAATGC	1 cut(s)	2052
MvaI	CCWGG	4 cut(s)	17, 174, 662, 1503
MvnI	CGCG	1 cut(s)	1483
MwoI	GCNNNNNNNGC	5 cut(s)	287, 1046, 1283, 1327, 1991
NciI	CCSGG	1 cut(s)	292
NdeI	CATATG	2 cut(s)	1855, 2104
NdeII	GATC	5 cut(s)	258, 727, 930, 1843, 1978
NlaIII	CATG	6 cut(s)	638, 836, 1453, 1520, 1667, 1699
NlaIV	GGNNCC	2 cut(s)	551, 1365
NmeAIII	GCCGAG	1 cut(s)	122
NmuCI	GTSAC	2 cut(s)	1793, 2029
NsiI	ATGCAT	1 cut(s)	1968
NspI	RCATGY	1 cut(s)	1453
PagI	TCATGA	2 cut(s)	1516, 1695
PciI	ACATGT	1 cut(s)	1449
PctI	GAATGC	1 cut(s)	2052
PfeI	GAWTC	3 cut(s)	127, 370, 388
PflMI	CCANNNNNTGG	2 cut(s)	92, 179
PfoI	TCCNGGA	1 cut(s)	15
PinAI	ACCGGT	1 cut(s)	1370
PleI	GAGTC	2 cut(s)	767, 2135
PpsI	GAGTC	2 cut(s)	767, 2135
PscI	ACATGT	1 cut(s)	1449
Psp6I	CCWGG	4 cut(s)	15, 172, 660, 1501
PspFI	CCCAGC	1 cut(s)	1316
PspGI	CCWGG	4 cut(s)	15, 172, 660, 1501
PspN4I	GGNNCC	2 cut(s)	551, 1365
PspPI	GGNCC	3 cut(s)	652, 1364, 2099
PstI	CTGCAG	2 cut(s)	676, 921
PstNI	CAGNNNCTG	1 cut(s)	1283
PvuII	CAGCTG	3 cut(s)	475, 817, 1139
RsaI	GTAC	4 cut(s)	241, 509, 692, 1460
RsaNI	GTAC	4 cut(s)	240, 508, 691, 1459
RseI	CAYNNNNRTG	1 cut(s)	636
SaqAI	TTAA	7 cut(s)	221, 326, 417, 450, 978, 1646, 1902
Sau3AI	GATC	5 cut(s)	258, 727, 930, 1843, 1978
Sau96I	GGNCC	3 cut(s)	652, 1364, 2099
ScaI	AGTACT	1 cut(s)	241
SchI	GAGTC	2 cut(s)	768, 2136
ScrFI	CCNGG	5 cut(s)	17, 174, 292, 662, 1503
SduI	GDGCHC	3 cut(s)	298, 661, 1498
SfaNI	GCATC	5 cut(s)	424, 520, 1116, 1933, 2083
SfcI	CTRYAG	4 cut(s)	192, 672, 917, 1561
SinI	GGWCC	2 cut(s)	652, 1364
SmiMI	CAYNNNNRTG	1 cut(s)	636
SmlI	CTYRAG	3 cut(s)	133, 357, 904
SmoI	CTYRAG	3 cut(s)	133, 357, 904
SsiI	CCGC	2 cut(s)	353, 1298
StyD4I	CCNGG	5 cut(s)	15, 172, 290, 660, 1501
StyI	CCWWGG	3 cut(s)	1041, 1657, 1708
TaaI	ACNGT	6 cut(s)	300, 592, 656, 975, 999, 2083
TaiI	ACGT	2 cut(s)	709, 1060
TaqI	TCGA	5 cut(s)	604, 940, 2078, 2125, 2130
TatI	WGTACW	1 cut(s)	239
TauI	GCSGC	1 cut(s)	356
TfiI	GAWTC	3 cut(s)	127, 370, 388
Tru1I	TTAA	7 cut(s)	221, 326, 417, 450, 978, 1646, 1902
Tru9I	TTAA	7 cut(s)	221, 326, 417, 450, 978, 1646, 1902
TscAI	CASTG	1 cut(s)	1186
TseFI	GTSAC	2 cut(s)	1793, 2029
TseI	GCWGC	9 cut(s)	71, 437, 533, 671, 814, 919, 1246, 1283, 1946
Tsp45I	GTSAC	2 cut(s)	1793, 2029
TspGWI	ACGGA	1 cut(s)	1567
TspRI	CASTG	1 cut(s)	1186
Van91I	CCANNNNNTGG	2 cut(s)	92, 179
VpaK11BI	GGWCC	2 cut(s)	652, 1364
XapI	RAATTY	2 cut(s)	645, 1471
XceI	RCATGY	1 cut(s)	1453
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2007
XmiI	GTMKAC	1 cut(s)	1671
ZraI	GACGTC	1 cut(s)	707
ZrmI	AGTACT	1 cut(s)	241
Zsp2I	ATGCAT	1 cut(s)	1968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.