Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002819

Physical Location & Seq

Genomic Coordinates Reverse (-)

10538085 .. 10540859

Gene Structure 2775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027319

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGGCGCTTTGCTGGCTGGGACGCAATATAGAGGAGATTTTGAGGAGAGGTTGAAGGCTGTTTTGAAAGAGGTGGAGGAGGCGGAAGGTAAGGTTATTCTCATCATTGATGAGATTCACCTTGTTCTTGGTGCTGGTAGAGCGGGGGGATCTATGGATGCAGCCAACCTCTTTAAGCCAGTGCTTGCTAGAGGTCAGCTACGGTGCATTGGTGCAACAACTCTTGAAGATTACAGGAAGTATGTGGAGAAGGATGCTGCATTTGCGAGAAGGTTCCAAAAGATTACTGTGGCTGAACCTAGTGTTGAAGACACAATTAGTATCCTCCGAGGATTGAAAGAGAGATACAAAAGTCACCATGGTGTTCGAATTTTGGACCGGGCCTTAATTGTTGCTGCGCAACTTTCAAGCCGATATATTACAGGGCGTCATCTCCCTGACAAGGCAATTGATCTGTTAGATGAGGCTTGTGCAAATGTGAGAGTCCTACTTGATAGTCAGCCTGAAGAAATCGACGACCTTGAAAGAAAGATAATGCAGCTGAAAGTTAAGGTTCATGCACTTGAGAAAGAAAAGGATATAACTAGCATAGTTCATCTTGTTGAAGTAAAACTTGATGACTTAGGAGACAAATTGCAGCCCTTGAGGATAAAATATGGAATTGAGAAGCAAAGGATTGATGTAAGTCAACGGTTTAAGCAGAAGCGTGAAAAGCTGTTAATTTCTTTATCAGAGGCTGAAAGAAGATGTGATTATGCCAAGGTTGCTGACTTGCGTTATGGAGCTATTCAGGAGTTGGAATCTGCCATTGCACAGCTTGATGGGAGCAGCAATGACAACTTGATGTTGACAGAGATTGTTGTACCAGAACACATTGCAGAGGTTGTAAGCCGTTCTACTGGCATACCCGTGACAAGGCTTGACCAGAATGGAAAAGAGACGTTAATTGGACTTTCTGAGAGCTTGCATAAAAGAGTAGTTGGCCAAGAACAGGCAGTTGATGCTGTTGCAGAGGCCGTGCTGAGGTCCAGAGCCGGTCTTGGCAGGCCAGAACAGCCAACTGGTTCCTTCTTATTTTTGGGTCCAACTGGTGTCGGAAAAACTGAGCTTGCAAAGCCTCTTGCTGAGCAACTGTTTGATGATGAAAATCTATTTGTAAGAATAGACTATGTTGTATTATTTGATGAAGTGGAAAAAGCACACAGCTCTGTGTTTAATGTTCTCCTGCAAGTTTTAGATGATGGAAGGTTTAATGTTCTCCTGCAAGTTTTAGATGATGGAAGTTTAACTGATGGACAAGGTGTTGTCGTGGACTTCAGAAATACTTTGATTATTCTGACCTCTAGCCTTGGAGCAAAGCATCTCCTTTCTGGTTTAATAGGAGAGTGTACAATGAAAGATGCTCGCGACCTAGTTATGCCAGAGGTGAGAAGTCACTTTAGTCCTGAATTACTAAATCGGCTTGATGAGATTGTCATATTTGATCCTCTTTCACACGAGCAATTAAAGAAGGTGGCCAGGTTGCAGATGAAGGATGTTGCTGTCCGACTTGCTGATAGGGGTGTTACTTTGGAATTGACTGATGCAGCATTGAATTGTATTATGGATAAGAGTCATGATCCGGTTTATGGTGCTAGACCAATCAGGAGATGGCTTGAGAAGAAGGTGGTGACGGAGTTATCAAGAATGCTGGTTAAAGAAGAGATGAGTGAGAACTCAGCAGTATACATAGATGCAGGAGTGAATGGAAGTGAGTTGGTGTATCTGGTTGAGAAGAATGGAAGCAGTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006417 GO:0006950 GO:0006979 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032268 GO:0032270 GO:0033554 GO:0034248 GO:0034250 GO:0034605 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043335 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:1901700 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

AAA AAA_2 ClpB_D2-small Clp_N

Protein Analysis

598

Amino Acids

66.44

Weight (kDa)

5.52

Isoelectric Point (pI)

36.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_lid_9	PF17871	101 - 195	4.1e-33	AAA lid domain
AAA_2	PF07724	353 - 389	1.4e-06	AAA domain (Cdc48 subfamily)
AAA_2	PF07724	391 - 417	4.7e-08	AAA domain (Cdc48 subfamily)
AAA_2	PF07724	417 - 491	1.6e-17	AAA domain (Cdc48 subfamily)
ClpB_D2-small	PF10431	497 - 576	5.9e-22	C-terminal, D2-small domain, of ClpB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74310 AT1G74310 AT4G14670
fragaria_vesca	FvH4_5g14020 FvH4_5g14020 FvH4_5g14020 FvH4_5g14020 FvH4_7g22310 FvH4_7g22310 FvH4_7g22310
malus_domestica	MD06G1201600.v1.1 MD14G1210600.v1.1 MD14G1211000.v1.1
prunus_persica	Prupe.5G203700_v2.0.a1
pyrus_communis	pycom06g17750 pycom14g17400
rosa_chinensis	RchiOBHm_Chr1g0366791 RchiOBHm_Chr7g0182871 RchiOBHm_Chr7g0182901
rosa_laevigata	RLG00000005096 RLG00000005098 RLG00000027319
rosa_multiflora	Rmu_sc0000014.1_g000026 Rmu_sc0000318.1_g000026
rosa_roxburghii	Rroxscaffold_3G00230950 Rroxscaffold_3G00270960
rosa_rugosa	Rorug01G0331900 Rorug01G0333200 Rorug06G0451000
rosa_samantha	Rh1AG340000 Rh7AG054200 Rh7AG403300 Rh7BG053700 Rh7CG055300 Rh7DG053500 Rh7DG053600
rosa_wichuraiana	Rw0G008600 Rw1G030200 Rw7G004420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	399
AccBSI	CCGCTC	1 cut(s)	143
AccI	GTMKAC	1 cut(s)	1725
AccII	CGCG	1 cut(s)	1407
AciI	CCGC	2 cut(s)	83, 143
AclWI	GGATC	3 cut(s)	157, 1478, 1613
AcoI	YGGCCR	2 cut(s)	982, 1515
AcsI	RAATTY	1 cut(s)	369
AcuI	CTGAAG	2 cut(s)	525, 1300
AcyI	GRCGYC	1 cut(s)	427
AfaI	GTAC	2 cut(s)	864, 1390
AfiI	CCNNNNNNNGG	5 cut(s)	442, 915, 991, 1023, 1628
AgsI	TTSAA	9 cut(s)	55, 67, 227, 308, 337, 408, 524, 605, 1594
AjnI	CCWGG	1 cut(s)	1517
AleI	CACNNNNGTG	1 cut(s)	360
AluBI	AGCT	8 cut(s)	199, 541, 715, 785, 817, 963, 1108, 1206
AluI	AGCT	8 cut(s)	199, 541, 715, 785, 817, 963, 1108, 1206
Alw26I	GTCTC	2 cut(s)	621, 932
AlwI	GGATC	3 cut(s)	157, 1478, 1613
AlwNI	CAGNNNCTG	1 cut(s)	737
AoxI	GGCC	5 cut(s)	381, 982, 1014, 1046, 1515
ApeKI	GCWGC	7 cut(s)	161, 257, 395, 538, 637, 828, 1586
ApoI	RAATTY	1 cut(s)	369
AspLEI	GCGC	2 cut(s)	8, 400
AspS9I	GGNCC	4 cut(s)	376, 381, 1026, 1082
AsuC2I	CCSGG	1 cut(s)	380
AsuHPI	GGTGA	4 cut(s)	110, 347, 1438, 1681
AsuII	TTCGAA	1 cut(s)	367
AvaII	GGWCC	3 cut(s)	376, 1026, 1082
BaeI	ACNNNNGTAYC	2 cut(s)	337, 370
BalI	TGGCCA	2 cut(s)	984, 1517
BauI	CACGAG	1 cut(s)	1496
BbsI	GAAGAC	1 cut(s)	315
BbvCI	CCTCAGC	1 cut(s)	1022
BbvI	GCAGC	7 cut(s)	173, 244, 382, 550, 649, 840, 1598
BccI	CCATC	5 cut(s)	815, 1235, 1271, 1286, 1644
BceAI	ACGGC	2 cut(s)	876, 1001
BciT130I	CCWGG	1 cut(s)	1519
BciVI	GTATCC	1 cut(s)	332
BcnI	CCSGG	1 cut(s)	380
BcoDI	GTCTC	2 cut(s)	621, 932
BfaI	CTAG	6 cut(s)	189, 300, 585, 1344, 1412, 1635
BfoI	RGCGCY	1 cut(s)	9
BfuI	GTATCC	1 cut(s)	332
BisI	GCNGC	7 cut(s)	162, 258, 396, 539, 638, 829, 1587
BlpI	GCTNAGC	1 cut(s)	1125
BlsI	GCNGC	7 cut(s)	163, 259, 397, 540, 639, 830, 1588
Bme1390I	CCNGG	2 cut(s)	380, 1519
Bme18I	GGWCC	3 cut(s)	376, 1026, 1082
BmgT120I	GGNCC	4 cut(s)	376, 381, 1026, 1082
BmiI	GGNNCC	3 cut(s)	275, 1066, 1083
BmrFI	CCNGG	2 cut(s)	380, 1519
BmsI	GCATC	7 cut(s)	148, 244, 991, 1369, 1390, 1573, 1723
BpiI	GAAGAC	1 cut(s)	315
Bpu10I	CCTNAGC	1 cut(s)	1022
Bpu1102I	GCTNAGC	1 cut(s)	1125
Bpu14I	TTCGAA	1 cut(s)	367
BpuEI	CTTGAG	3 cut(s)	584, 664, 1676
BpuMI	CCSGG	1 cut(s)	380
BsaBI	GATNNNNATC	1 cut(s)	1146
BsaHI	GRCGYC	1 cut(s)	427
BsaJI	CCNNGG	4 cut(s)	328, 358, 759, 1348
BsaWI	WCCGGW	1 cut(s)	1621
Bsc4I	CCNNNNNNNGG	5 cut(s)	442, 915, 991, 1023, 1628
Bse118I	RCCGGY	1 cut(s)	1034
Bse1I	ACTGG	4 cut(s)	179, 904, 1066, 1093
Bse3DI	GCAATG	3 cut(s)	807, 838, 873
Bse8I	GATNNNNATC	1 cut(s)	1146
BseBI	CCWGG	1 cut(s)	1519
BseDI	CCNNGG	4 cut(s)	328, 358, 759, 1348
BseGI	GGATG	3 cut(s)	163, 259, 1540
BseJI	GATNNNNATC	1 cut(s)	1146
BseLI	CCNNNNNNNGG	5 cut(s)	442, 915, 991, 1023, 1628
BseMI	GCAATG	3 cut(s)	807, 838, 873
BseMII	CTCAG	5 cut(s)	948, 1013, 1095, 1116, 1731
BseNI	ACTGG	4 cut(s)	179, 904, 1066, 1093
BseRI	GAGGAG	3 cut(s)	48, 59, 92
BseXI	GCAGC	7 cut(s)	173, 244, 382, 550, 649, 840, 1598
BseYI	CCCAGC	1 cut(s)	17
Bsh1236I	CGCG	1 cut(s)	1407
BshFI	GGCC	5 cut(s)	383, 984, 1016, 1048, 1517
BsiSI	CCGG	3 cut(s)	379, 1035, 1622
BslFI	GGGAC	1 cut(s)	34
BslI	CCNNNNNNNGG	5 cut(s)	442, 915, 991, 1023, 1628
BsmAI	GTCTC	2 cut(s)	621, 932
BsmBI	CGTCTC	1 cut(s)	932
BsmFI	GGGAC	1 cut(s)	34
BsmI	GAATGC	1 cut(s)	1692
BsnI	GGCC	5 cut(s)	383, 984, 1016, 1048, 1517
Bsp119I	TTCGAA	1 cut(s)	367
Bsp1407I	TGTACA	1 cut(s)	1388
Bsp143I	GATC	4 cut(s)	149, 451, 1483, 1618
Bsp1720I	GCTNAGC	1 cut(s)	1125
Bsp19I	CCATGG	1 cut(s)	358
Bsp68I	TCGCGA	1 cut(s)	1407
BspACI	CCGC	2 cut(s)	83, 143
BspANI	GGCC	5 cut(s)	383, 984, 1016, 1048, 1517
BspCNI	CTCAG	5 cut(s)	949, 1014, 1096, 1117, 1730
BspFNI	CGCG	1 cut(s)	1407
BspHI	TCATGA	1 cut(s)	1615
BspLI	GGNNCC	3 cut(s)	275, 1066, 1083
BspPI	GGATC	3 cut(s)	157, 1478, 1613
BspT104I	TTCGAA	1 cut(s)	367
BsrBI	CCGCTC	1 cut(s)	143
BsrDI	GCAATG	3 cut(s)	807, 838, 873
BsrFI	RCCGGY	1 cut(s)	1034
BsrGI	TGTACA	1 cut(s)	1388
BsrI	ACTGG	4 cut(s)	179, 904, 1066, 1093
BssAI	RCCGGY	1 cut(s)	1034
BssECI	CCNNGG	4 cut(s)	328, 358, 759, 1348
BssMI	GATC	4 cut(s)	149, 451, 1483, 1618
BssNAI	GTATAC	1 cut(s)	1726
BssNI	GRCGYC	1 cut(s)	427
BssSI	CACGAG	1 cut(s)	1496
BssT1I	CCWWGG	3 cut(s)	358, 759, 1348
Bst1107I	GTATAC	1 cut(s)	1726
Bst2BI	CACGAG	1 cut(s)	1496
Bst2UI	CCWGG	1 cut(s)	1519
Bst4CI	ACNGT	4 cut(s)	204, 289, 693, 1134
Bst6I	CTCTTC	1 cut(s)	1695
BstACI	GRCGYC	1 cut(s)	427
BstAPI	GCANNNNNTGC	1 cut(s)	1001
BstAUI	TGTACA	1 cut(s)	1388
BstBI	TTCGAA	1 cut(s)	367
BstC8I	GCNNGC	6 cut(s)	15, 186, 965, 1046, 1110, 1405
BstDEI	CTNAG	6 cut(s)	622, 957, 1022, 1104, 1125, 1717
BstDSI	CCRYGG	1 cut(s)	358
BstF5I	GGATG	3 cut(s)	163, 259, 1540
BstFNI	CGCG	1 cut(s)	1407
BstH2I	RGCGCY	1 cut(s)	9
BstHHI	GCGC	2 cut(s)	8, 400
BstKTI	GATC	4 cut(s)	152, 454, 1486, 1621
BstMAI	GTCTC	2 cut(s)	621, 932
BstMBI	GATC	4 cut(s)	149, 451, 1483, 1618
BstMWI	GCNNNNNNNGC	8 cut(s)	14, 140, 263, 712, 764, 1001, 1054, 1114
BstNI	CCWGG	1 cut(s)	1519
BstSCI	CCNGG	2 cut(s)	378, 1517
BstUI	CGCG	1 cut(s)	1407
BstV1I	GCAGC	7 cut(s)	173, 244, 382, 550, 649, 840, 1598
BstV2I	GAAGAC	1 cut(s)	315
BstX2I	RGATCY	1 cut(s)	149
BstYI	RGATCY	1 cut(s)	149
BstZ17I	GTATAC	1 cut(s)	1726
BsuI	GTATCC	1 cut(s)	332
BsuRI	GGCC	5 cut(s)	383, 984, 1016, 1048, 1517
BtgI	CCRYGG	1 cut(s)	358
BtsCI	GGATG	3 cut(s)	163, 259, 1540
BtsIMutI	CAGTG	1 cut(s)	186
BtuMI	TCGCGA	1 cut(s)	1407
Cac8I	GCNNGC	6 cut(s)	15, 186, 965, 1046, 1110, 1405
CaiI	CAGNNNCTG	1 cut(s)	737
CciI	TCATGA	1 cut(s)	1615
CfoI	GCGC	2 cut(s)	8, 400
Cfr10I	RCCGGY	1 cut(s)	1034
Cfr13I	GGNCC	4 cut(s)	376, 381, 1026, 1082
CseI	GACGC	2 cut(s)	31, 416
Csp6I	GTAC	2 cut(s)	863, 1389
CviAII	CATG	3 cut(s)	359, 557, 1616
CviQI	GTAC	2 cut(s)	863, 1389
DdeI	CTNAG	6 cut(s)	622, 957, 1022, 1104, 1125, 1717
DpnI	GATC	4 cut(s)	151, 453, 1485, 1620
DpnII	GATC	4 cut(s)	149, 451, 1483, 1618
EaeI	YGGCCR	2 cut(s)	982, 1515
Eam1104I	CTCTTC	1 cut(s)	1695
EarI	CTCTTC	1 cut(s)	1695
EciI	GGCGGA	1 cut(s)	98
Eco130I	CCWWGG	3 cut(s)	358, 759, 1348
Eco47I	GGWCC	3 cut(s)	376, 1026, 1082
Eco57I	CTGAAG	2 cut(s)	525, 1300
EcoRII	CCWGG	1 cut(s)	1517
EcoT14I	CCWWGG	3 cut(s)	358, 759, 1348
ErhI	CCWWGG	3 cut(s)	358, 759, 1348
Esp3I	CGTCTC	1 cut(s)	932
FaeI	CATG	3 cut(s)	362, 560, 1619
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FaqI	GGGAC	1 cut(s)	34
FatI	CATG	3 cut(s)	358, 556, 1615
FauI	CCCGC	1 cut(s)	136
FblI	GTMKAC	1 cut(s)	1725
Fnu4HI	GCNGC	7 cut(s)	162, 258, 396, 539, 638, 829, 1587
FokI	GGATG	3 cut(s)	170, 266, 1547
Fsp4HI	GCNGC	7 cut(s)	162, 258, 396, 539, 638, 829, 1587
FspBI	CTAG	6 cut(s)	189, 300, 585, 1344, 1412, 1635
FspI	TGCGCA	1 cut(s)	399
GlaI	GCGC	2 cut(s)	7, 399
GluI	GCNGC	7 cut(s)	162, 258, 396, 539, 638, 829, 1587
GsaI	CCCAGC	1 cut(s)	21
HaeII	RGCGCY	1 cut(s)	9
HaeIII	GGCC	5 cut(s)	383, 984, 1016, 1048, 1517
HapII	CCGG	3 cut(s)	379, 1035, 1622
HgaI	GACGC	2 cut(s)	31, 416
HhaI	GCGC	2 cut(s)	8, 400
Hin1I	GRCGYC	1 cut(s)	427
Hin1II	CATG	3 cut(s)	362, 560, 1619
Hin6I	GCGC	2 cut(s)	6, 398
HinP1I	GCGC	2 cut(s)	6, 398
HincII	GTYRAC	2 cut(s)	689, 849
HindII	GTYRAC	2 cut(s)	689, 849
HinfI	GANTC	4 cut(s)	115, 483, 800, 1612
HpaII	CCGG	3 cut(s)	379, 1035, 1622
HphI	GGTGA	4 cut(s)	110, 347, 1438, 1681
Hpy166II	GTNNAC	5 cut(s)	689, 849, 1312, 1389, 1726
Hpy188I	TCNGA	7 cut(s)	329, 733, 958, 1097, 1319, 1338, 1547
Hpy188III	TCNNGA	8 cut(s)	224, 791, 1029, 1406, 1445, 1616, 1645, 1683
Hpy8I	GTNNAC	5 cut(s)	689, 849, 1312, 1389, 1726
Hpy99I	CGWCG	1 cut(s)	518
HpyAV	CCTTC	9 cut(s)	49, 80, 244, 264, 1078, 1239, 1504, 1525, 1657
HpyCH4III	ACNGT	4 cut(s)	204, 289, 693, 1134
HpyCH4IV	ACGT	1 cut(s)	941
HpyF10VI	GCNNNNNNNGC	8 cut(s)	14, 140, 263, 712, 764, 1001, 1054, 1114
HpyF3I	CTNAG	6 cut(s)	622, 957, 1022, 1104, 1125, 1717
HpySE526I	ACGT	1 cut(s)	941
Hsp92I	GRCGYC	1 cut(s)	427
Hsp92II	CATG	3 cut(s)	362, 560, 1619
HspAI	GCGC	2 cut(s)	6, 398
Kzo9I	GATC	4 cut(s)	149, 451, 1483, 1618
LmnI	GCTCC	3 cut(s)	782, 825, 1352
Lsp1109I	GCAGC	7 cut(s)	173, 244, 382, 550, 649, 840, 1598
LweI	GCATC	7 cut(s)	148, 244, 991, 1369, 1390, 1573, 1723
MaeI	CTAG	6 cut(s)	189, 300, 585, 1344, 1412, 1635
MaeII	ACGT	1 cut(s)	941
MaeIII	GTNAC	5 cut(s)	353, 910, 1433, 1564, 1669
MalI	GATC	4 cut(s)	151, 453, 1485, 1620
MbiI	CCGCTC	1 cut(s)	143
MboI	GATC	4 cut(s)	149, 451, 1483, 1618
MboII	GAAGA	7 cut(s)	239, 320, 518, 756, 1672, 1712, 1786
MfeI	CAATTG	1 cut(s)	447
MflI	RGATCY	1 cut(s)	149
MlsI	TGGCCA	2 cut(s)	984, 1517
MluNI	TGGCCA	2 cut(s)	984, 1517
MlyI	GAGTC	2 cut(s)	492, 1621
MmeI	TCCRAC	4 cut(s)	777, 1075, 1109, 1570
Mox20I	TGGCCA	2 cut(s)	984, 1517
MscI	TGGCCA	2 cut(s)	984, 1517
MslI	CAYNNNNRTG	2 cut(s)	360, 908
Msp20I	TGGCCA	2 cut(s)	984, 1517
MspA1I	CMGCKG	1 cut(s)	541
MspI	CCGG	3 cut(s)	379, 1035, 1622
MspR9I	CCNGG	2 cut(s)	380, 1519
MunI	CAATTG	1 cut(s)	447
Mva1269I	GAATGC	1 cut(s)	1692
MvaI	CCWGG	1 cut(s)	1519
MvnI	CGCG	1 cut(s)	1407
MwoI	GCNNNNNNNGC	8 cut(s)	14, 140, 263, 712, 764, 1001, 1054, 1114
NciI	CCSGG	1 cut(s)	380
NcoI	CCATGG	1 cut(s)	358
NdeII	GATC	4 cut(s)	149, 451, 1483, 1618
NlaIII	CATG	3 cut(s)	362, 560, 1619
NlaIV	GGNNCC	3 cut(s)	275, 1066, 1083
NmuCI	GTSAC	4 cut(s)	353, 910, 1433, 1669
NruI	TCGCGA	1 cut(s)	1407
NsbI	TGCGCA	1 cut(s)	399
NspV	TTCGAA	1 cut(s)	367
OliI	CACNNNNGTG	1 cut(s)	360
PagI	TCATGA	1 cut(s)	1615
PctI	GAATGC	1 cut(s)	1692
PfeI	GAWTC	2 cut(s)	115, 800
PkrI	GCNGC	7 cut(s)	163, 259, 397, 540, 639, 830, 1588
PleI	GAGTC	2 cut(s)	491, 1620
PpsI	GAGTC	2 cut(s)	491, 1620
Psp6I	CCWGG	1 cut(s)	1517
PspFI	CCCAGC	1 cut(s)	17
PspGI	CCWGG	1 cut(s)	1517
PspN4I	GGNNCC	3 cut(s)	275, 1066, 1083
PspPI	GGNCC	4 cut(s)	376, 381, 1026, 1082
PstNI	CAGNNNCTG	1 cut(s)	737
PsuI	RGATCY	1 cut(s)	149
PvuII	CAGCTG	1 cut(s)	541
RruI	TCGCGA	1 cut(s)	1407
RsaI	GTAC	2 cut(s)	864, 1390
RsaNI	GTAC	2 cut(s)	863, 1389
RseI	CAYNNNNRTG	2 cut(s)	360, 908
SatI	GCNGC	7 cut(s)	162, 258, 396, 539, 638, 829, 1587
Sau3AI	GATC	4 cut(s)	149, 451, 1483, 1618
Sau96I	GGNCC	4 cut(s)	376, 381, 1026, 1082
SchI	GAGTC	2 cut(s)	492, 1621
ScrFI	CCNGG	2 cut(s)	380, 1519
SfaNI	GCATC	7 cut(s)	148, 244, 991, 1369, 1390, 1573, 1723
SfuI	TTCGAA	1 cut(s)	367
SinI	GGWCC	3 cut(s)	376, 1026, 1082
SmiMI	CAYNNNNRTG	2 cut(s)	360, 908
SmlI	CTYRAG	3 cut(s)	563, 643, 1655
SmoI	CTYRAG	3 cut(s)	563, 643, 1655
SsiI	CCGC	2 cut(s)	83, 143
SspMI	CTAG	6 cut(s)	189, 300, 585, 1344, 1412, 1635
StyD4I	CCNGG	2 cut(s)	378, 1517
StyI	CCWWGG	3 cut(s)	358, 759, 1348
TaaI	ACNGT	4 cut(s)	204, 289, 693, 1134
TaiI	ACGT	1 cut(s)	944
TaqI	TCGA	2 cut(s)	367, 513
TatI	WGTACW	1 cut(s)	1388
TfiI	GAWTC	2 cut(s)	115, 800
TscAI	CASTG	1 cut(s)	186
TseFI	GTSAC	4 cut(s)	353, 910, 1433, 1669
TseI	GCWGC	7 cut(s)	161, 257, 395, 538, 637, 828, 1586
Tsp45I	GTSAC	4 cut(s)	353, 910, 1433, 1669
TspDTI	ATGAA	6 cut(s)	545, 584, 1158, 1200, 1409, 1544
TspGWI	ACGGA	1 cut(s)	1688
TspRI	CASTG	1 cut(s)	186
VpaK11BI	GGWCC	3 cut(s)	376, 1026, 1082
XapI	RAATTY	1 cut(s)	369
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1647
XmiI	GTMKAC	1 cut(s)	1725
XspI	CTAG	6 cut(s)	189, 300, 585, 1344, 1412, 1635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.