MD00G1179100.v1.1

Glutamyl endopeptidase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
42087612 .. 42089419
1808 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1179100.v1.1.491

Sequence Viewer

Length: 1380 bp
ATGAATGTCGACAGGATGTTCCACAAAGTCTATCATCTTCTCTCCCTCACGTCTCCTCGCTCTCTCCCTTTAAAGCCTCTCCACTTCCCACCGGTCTTTTCACTCTCCCACCTCAGACCAAGGCGCTCCCCATACGATTCCGTAAGGTCCATCAGAACATCCACCGCCGTCATGGCCACCTCCCGCCTCCGCAACCTCGTCCCCGCCAACACCGTCGCTTCCGAGGATGCCAGCGGTGGCGGAGCCTCCAAAGGCTCTGTCTCTTCCACCGCTGCTACTACTGCACTTGATGATGAAGAAGATGCAACTCTGGCAGTTAGATACCGTCTTCCTCAGCAAGAAATTAAAGATATTGTGGATGCTCCGCCACTTCCCGCCTTGTCATTCTCGCCGCATAGGGATAAGATACTGTTTCTCAAGCGGAGAGCTTTGCCGCCATTGACAGAACTTGCAAGACCTGAGGAAAAGCTTGCCGGTGTTCGTATTGATGGAAAATGCAATACAAGGACCAGGATGTCGTTTTACTCGGGTGTTGGGATCCATCAATTATTGCCCGATGGCACCCTTGGTCCCGAAATAGAGGTGCGTGGATTCCCTGATGGTGCCAAGATCAATTTTGTTACTTGGTCCCCGGATGGCCGCCATTTAGCCTTCACCATCCGGTTTGATGAGGGGGAAAGTAGTACTAGTAAGCTCAGAGTATGGGTGGCCCAAGTTGAAACAGGGATTGCTAGACCTTTGTTTAAGTCTGAAGAAATATTTTTGAATGCTATTTTTGACAATTTTGTTTGGGTGAATGACTCCTCCTTGTTAGTTTGCACCATTCCCCAGTCTCGTGGAGACCCGCCAAAGAAACCTTTGGTTCCTTTTGGGCCTAAAATTCAATCTAACGAGCAGAAAAACACTATCCAAGTGAGGACCTTTCAGGATTTGCTGAAGGATGAGTATGATGAAGATTTGTTTGACTACTACACCACGTCACAACTTGTTTTGGCCTCCTTGGATGGGGCGGTGAAGGAAATTGGTCCTCCAGCTGTATATACATCAATGAACCCCTCTCCCGATCAGAAATACCTTTTAATTAGTTCAATTCACAGACCATACTCTTTCATTGTACCATGCGGAAGATTTCCCAAGAAGGTGGATGTGTGGACAGCTGATGGGAAGTTTGTTAGAGAACTTTGTGATCTGCCGCTTGCTGAGGACATCCCCATTGCATTCAGTAGTGTGCGAAAAGGGAAGCGTTCTCTCAACTGGAGAGCGGATAAACCATCAACACTCTACTGGCATGCATTTTTGGCTCTGTTTTCTAATTGTTTGAATAACTTAAAAGACATCTCTTTGAATTCTTATCTCTTTCACTCTCTCATGATATCATAA
Functional Annotation

Protein Analysis

460

Amino Acids

51.39

Weight (kDa)

8.91

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 514
AccB1I GGYRCC 2 cut(s) 560, 602
AccBSI CCGCTC 1 cut(s) 1262
AccI GTMKAC 1 cut(s) 9
AclWI GGATC 2 cut(s) 532, 545
AcoI YGGCCR 2 cut(s) 174, 637
AcsI RAATTY 2 cut(s) 879, 1345
AcuI CTGAAG 2 cut(s) 771, 956
AfaI GTAC 2 cut(s) 685, 1116
AfiI CCNNNNNNNGG 1 cut(s) 1005
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 6 cut(s) 719, 766, 884, 1089, 1321, 1345
AhlI ACTAGT 1 cut(s) 686
AjiI CACGTC 2 cut(s) 51, 978
AjnI CCWGG 1 cut(s) 509
AluBI AGCT 5 cut(s) 428, 469, 694, 1034, 1157
AluI AGCT 5 cut(s) 428, 469, 694, 1034, 1157
Alw26I GTCTC 4 cut(s) 57, 265, 834, 837
AlwI GGATC 2 cut(s) 532, 545
Ama87I CYCGRG 1 cut(s) 526
AoxI GGCC 5 cut(s) 174, 637, 708, 872, 993
ApeKI GCWGC 1 cut(s) 272
ApoI RAATTY 2 cut(s) 879, 1345
ArsI GACNNNNNNTTYG 2 cut(s) 243, 275
AsiGI ACCGGT 1 cut(s) 91
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 8 cut(s) 147, 507, 569, 627, 709, 872, 918, 1025
AsuC2I CCSGG 1 cut(s) 632
AsuHPI GGTGA 3 cut(s) 646, 805, 1024
AvaI CYCGRG 1 cut(s) 526
AvaII GGWCC 6 cut(s) 147, 507, 569, 627, 918, 1025
AxyI CCTNAGG 1 cut(s) 459
BalI TGGCCA 1 cut(s) 176
BamHI GGATCC 1 cut(s) 537
BanI GGYRCC 2 cut(s) 560, 602
BauI CACGAG 1 cut(s) 834
BbsI GAAGAC 1 cut(s) 320
BbvCI CCTCAGC 2 cut(s) 333, 1200
BbvI GCAGC 1 cut(s) 259
BceAI ACGGC 1 cut(s) 152
BciT130I CCWGG 1 cut(s) 511
BcnI CCSGG 1 cut(s) 632
BcoDI GTCTC 4 cut(s) 57, 265, 834, 837
BcuI ACTAGT 1 cut(s) 686
BfaI CTAG 2 cut(s) 687, 732
BfoI RGCGCY 1 cut(s) 127
BglI GCCNNNNNGGC 1 cut(s) 173
BisI GCNGC 5 cut(s) 273, 392, 434, 640, 1193
BlsI GCNGC 5 cut(s) 274, 393, 435, 641, 1194
BmcAI AGTACT 1 cut(s) 685
Bme1390I CCNGG 2 cut(s) 511, 632
Bme18I GGWCC 6 cut(s) 147, 507, 569, 627, 918, 1025
BmeT110I CYCGRG 1 cut(s) 526
BmgBI CACGTC 2 cut(s) 51, 978
BmgT120I GGNCC 8 cut(s) 147, 507, 569, 627, 709, 872, 918, 1025
BmiI GGNNCC 7 cut(s) 244, 539, 562, 571, 604, 629, 864
BmrFI CCNGG 2 cut(s) 511, 632
BmrI ACTGGG 1 cut(s) 823
BmsI GCATC 3 cut(s) 217, 292, 349
BmuI ACTGGG 1 cut(s) 823
BpiI GAAGAC 1 cut(s) 320
BpmI CTGGAG 2 cut(s) 1014, 1276
Bpu10I CCTNAGC 2 cut(s) 333, 1200
BpuEI CTTGAG 1 cut(s) 401
BpuMI CCSGG 1 cut(s) 632
BsaI GGTCTC 1 cut(s) 834
BsaJI CCNNGG 5 cut(s) 119, 222, 565, 630, 999
BsaWI WCCGGW 2 cut(s) 91, 660
Bsc4I CCNNNNNNNGG 1 cut(s) 1005
Bse118I RCCGGY 2 cut(s) 91, 473
Bse1I ACTGG 3 cut(s) 829, 1259, 1289
Bse21I CCTNAGG 1 cut(s) 459
Bse3DI GCAATG 1 cut(s) 1212
BseBI CCWGG 1 cut(s) 511
BseDI CCNNGG 5 cut(s) 119, 222, 565, 630, 999
BseLI CCNNNNNNNGG 1 cut(s) 1005
BseMI GCAATG 1 cut(s) 1212
BseMII CTCAG 5 cut(s) 127, 347, 450, 709, 1191
BseNI ACTGG 3 cut(s) 829, 1259, 1289
BseRI GAGGAG 2 cut(s) 45, 793
BseXI GCAGC 1 cut(s) 259
BsgI GTGCAG 1 cut(s) 267
BshFI GGCC 5 cut(s) 176, 639, 710, 874, 995
BshNI GGYRCC 2 cut(s) 560, 602
BshTI ACCGGT 1 cut(s) 91
BsiHKCI CYCGRG 1 cut(s) 526
BsiSI CCGG 4 cut(s) 92, 474, 632, 661
BslFI GGGAC 3 cut(s) 185, 555, 613
BslI CCNNNNNNNGG 1 cut(s) 1005
BsmAI GTCTC 4 cut(s) 57, 265, 834, 837
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 3 cut(s) 185, 555, 613
BsmI GAATGC 2 cut(s) 772, 1217
BsnI GGCC 5 cut(s) 176, 639, 710, 874, 995
Bso31I GGTCTC 1 cut(s) 834
BsoBI CYCGRG 1 cut(s) 526
Bsp143I GATC 4 cut(s) 537, 609, 1063, 1186
BspANI GGCC 5 cut(s) 176, 639, 710, 874, 995
BspCNI CTCAG 5 cut(s) 126, 346, 451, 708, 1192
BspHI TCATGA 1 cut(s) 1368
BspLI GGNNCC 7 cut(s) 244, 539, 562, 571, 604, 629, 864
BspPI GGATC 2 cut(s) 532, 545
BspT107I GGYRCC 2 cut(s) 560, 602
BspTNI GGTCTC 1 cut(s) 834
BsrBI CCGCTC 1 cut(s) 1262
BsrDI GCAATG 1 cut(s) 1212
BsrFI RCCGGY 2 cut(s) 91, 473
BsrI ACTGG 3 cut(s) 829, 1259, 1289
BssAI RCCGGY 2 cut(s) 91, 473
BssECI CCNNGG 5 cut(s) 119, 222, 565, 630, 999
BssMI GATC 4 cut(s) 537, 609, 1063, 1186
BssSI CACGAG 1 cut(s) 834
BssT1I CCWWGG 3 cut(s) 119, 565, 999
Bst2BI CACGAG 1 cut(s) 834
Bst2UI CCWGG 1 cut(s) 511
Bst4CI ACNGT 3 cut(s) 214, 326, 411
Bst6I CTCTTC 1 cut(s) 268
BstC8I GCNNGC 4 cut(s) 232, 471, 1197, 1290
BstDEI CTNAG 5 cut(s) 113, 333, 459, 695, 1200
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 1 cut(s) 126
BstKTI GATC 4 cut(s) 540, 612, 1066, 1189
BstMAI GTCTC 4 cut(s) 57, 265, 834, 837
BstMBI GATC 4 cut(s) 537, 609, 1063, 1186
BstMWI GCNNNNNNNGC 4 cut(s) 173, 281, 311, 1298
BstNI CCWGG 1 cut(s) 511
BstNSI RCATGY 1 cut(s) 1292
BstSCI CCNGG 2 cut(s) 509, 630
BstV1I GCAGC 1 cut(s) 259
BstV2I GAAGAC 1 cut(s) 320
BstX2I RGATCY 1 cut(s) 537
BstXI CCANNNNNNTGG 2 cut(s) 836, 1141
BstYI RGATCY 1 cut(s) 537
Bsu36I CCTNAGG 1 cut(s) 459
BsuRI GGCC 5 cut(s) 176, 639, 710, 874, 995
BtrI CACGTC 2 cut(s) 51, 978
Cac8I GCNNGC 4 cut(s) 232, 471, 1197, 1290
CciI TCATGA 1 cut(s) 1368
CfoI GCGC 1 cut(s) 126
Cfr10I RCCGGY 2 cut(s) 91, 473
Cfr13I GGNCC 8 cut(s) 147, 507, 569, 627, 709, 872, 918, 1025
Csp6I GTAC 2 cut(s) 684, 1115
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 4 cut(s) 172, 1119, 1289, 1369
CviQI GTAC 2 cut(s) 684, 1115
DdeI CTNAG 5 cut(s) 113, 333, 459, 695, 1200
DpnI GATC 4 cut(s) 539, 611, 1065, 1188
DpnII GATC 4 cut(s) 537, 609, 1063, 1186
DraI TTTAAA 1 cut(s) 72
DrdI GACNNNNNNGTC 1 cut(s) 514
DseDI GACNNNNNNGTC 1 cut(s) 514
EaeI YGGCCR 2 cut(s) 174, 637
Eam1104I CTCTTC 1 cut(s) 268
EarI CTCTTC 1 cut(s) 268
EciI GGCGGA 2 cut(s) 255, 354
Eco130I CCWWGG 3 cut(s) 119, 565, 999
Eco31I GGTCTC 1 cut(s) 834
Eco32I GATATC 1 cut(s) 1374
Eco47I GGWCC 6 cut(s) 147, 507, 569, 627, 918, 1025
Eco57I CTGAAG 2 cut(s) 771, 956
Eco81I CCTNAGG 1 cut(s) 459
Eco88I CYCGRG 1 cut(s) 526
EcoO109I RGGNCCY 1 cut(s) 918
EcoRI GAATTC 1 cut(s) 1345
EcoRII CCWGG 1 cut(s) 509
EcoRV GATATC 1 cut(s) 1374
EcoT14I CCWWGG 3 cut(s) 119, 565, 999
EcoT22I ATGCAT 1 cut(s) 1294
ErhI CCWWGG 3 cut(s) 119, 565, 999
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 4 cut(s) 175, 1122, 1292, 1372
FaqI GGGAC 3 cut(s) 185, 555, 613
FatI CATG 4 cut(s) 171, 1118, 1288, 1368
FauI CCCGC 4 cut(s) 191, 211, 382, 852
FblI GTMKAC 1 cut(s) 9
Fnu4HI GCNGC 5 cut(s) 273, 392, 434, 640, 1193
Fsp4HI GCNGC 5 cut(s) 273, 392, 434, 640, 1193
FspBI CTAG 2 cut(s) 687, 732
GlaI GCGC 1 cut(s) 125
GluI GCNGC 5 cut(s) 273, 392, 434, 640, 1193
GsuI CTGGAG 2 cut(s) 1014, 1276
HaeII RGCGCY 1 cut(s) 127
HaeIII GGCC 5 cut(s) 176, 639, 710, 874, 995
HapII CCGG 4 cut(s) 92, 474, 632, 661
HhaI GCGC 1 cut(s) 126
Hin1II CATG 4 cut(s) 175, 1122, 1292, 1372
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HincII GTYRAC 1 cut(s) 10
HindII GTYRAC 1 cut(s) 10
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 3 cut(s) 137, 591, 800
HpaII CCGG 4 cut(s) 92, 474, 632, 661
HphI GGTGA 3 cut(s) 646, 805, 1024
Hpy166II GTNNAC 2 cut(s) 10, 1152
Hpy188I TCNGA 6 cut(s) 116, 155, 223, 698, 751, 1068
Hpy188III TCNNGA 4 cut(s) 572, 926, 1061, 1369
Hpy8I GTNNAC 2 cut(s) 10, 1152
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 4 cut(s) 661, 931, 1009, 1132
HpyCH4III ACNGT 3 cut(s) 214, 326, 411
HpyCH4IV ACGT 2 cut(s) 50, 977
HpyCH4V TGCA 7 cut(s) 284, 305, 452, 498, 819, 1217, 1292
HpyF10VI GCNNNNNNNGC 4 cut(s) 173, 281, 311, 1298
HpyF3I CTNAG 5 cut(s) 113, 333, 459, 695, 1200
HpySE526I ACGT 2 cut(s) 50, 977
Hsp92II CATG 4 cut(s) 175, 1122, 1292, 1372
HspAI GCGC 1 cut(s) 124
Kzo9I GATC 4 cut(s) 537, 609, 1063, 1186
LmnI GCTCC 3 cut(s) 131, 242, 367
Lsp1109I GCAGC 1 cut(s) 259
LweI GCATC 3 cut(s) 217, 292, 349
MaeI CTAG 2 cut(s) 687, 732
MaeII ACGT 2 cut(s) 50, 977
MaeIII GTNAC 2 cut(s) 619, 978
MalI GATC 4 cut(s) 539, 611, 1065, 1188
MbiI CCGCTC 1 cut(s) 1262
MboI GATC 4 cut(s) 537, 609, 1063, 1186
MboII GAAGA 8 cut(s) 29, 255, 308, 311, 320, 764, 965, 1137
MflI RGATCY 1 cut(s) 537
MlsI TGGCCA 1 cut(s) 176
MluNI TGGCCA 1 cut(s) 176
MlyI GAGTC 1 cut(s) 794
Mox20I TGGCCA 1 cut(s) 176
Mph1103I ATGCAT 1 cut(s) 1294
MscI TGGCCA 1 cut(s) 176
MseI TTAA 5 cut(s) 71, 345, 744, 1079, 1328
Msp20I TGGCCA 1 cut(s) 176
MspA1I CMGCKG 4 cut(s) 234, 272, 1034, 1157
MspI CCGG 4 cut(s) 92, 474, 632, 661
MspR9I CCNGG 2 cut(s) 511, 632
Mva1269I GAATGC 2 cut(s) 772, 1217
MvaI CCWGG 1 cut(s) 511
MwoI GCNNNNNNNGC 4 cut(s) 173, 281, 311, 1298
NciI CCSGG 1 cut(s) 632
NdeII GATC 4 cut(s) 537, 609, 1063, 1186
NlaIII CATG 4 cut(s) 175, 1122, 1292, 1372
NlaIV GGNNCC 7 cut(s) 244, 539, 562, 571, 604, 629, 864
NmuCI GTSAC 1 cut(s) 978
NsiI ATGCAT 1 cut(s) 1294
NspI RCATGY 1 cut(s) 1292
PaeI GCATGC 1 cut(s) 1292
PagI TCATGA 1 cut(s) 1368
PctI GAATGC 2 cut(s) 772, 1217
PfeI GAWTC 2 cut(s) 137, 591
PinAI ACCGGT 1 cut(s) 91
PkrI GCNGC 5 cut(s) 274, 393, 435, 641, 1194
PleI GAGTC 1 cut(s) 794
PpsI GAGTC 1 cut(s) 794
PpuMI RGGWCCY 1 cut(s) 918
Psp5II RGGWCCY 1 cut(s) 918
Psp6I CCWGG 1 cut(s) 509
PspGI CCWGG 1 cut(s) 509
PspN4I GGNNCC 7 cut(s) 244, 539, 562, 571, 604, 629, 864
PspPI GGNCC 8 cut(s) 147, 507, 569, 627, 709, 872, 918, 1025
PspPPI RGGWCCY 1 cut(s) 918
PsuI RGATCY 1 cut(s) 537
PvuII CAGCTG 2 cut(s) 1034, 1157
RsaI GTAC 2 cut(s) 685, 1116
RsaNI GTAC 2 cut(s) 684, 1115
SalI GTCGAC 1 cut(s) 8
SaqAI TTAA 5 cut(s) 71, 345, 744, 1079, 1328
SatI GCNGC 5 cut(s) 273, 392, 434, 640, 1193
Sau3AI GATC 4 cut(s) 537, 609, 1063, 1186
Sau96I GGNCC 8 cut(s) 147, 507, 569, 627, 709, 872, 918, 1025
ScaI AGTACT 1 cut(s) 685
SchI GAGTC 1 cut(s) 794
ScrFI CCNGG 2 cut(s) 511, 632
SfaNI GCATC 3 cut(s) 217, 292, 349
SinI GGWCC 6 cut(s) 147, 507, 569, 627, 918, 1025
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
SpeI ACTAGT 1 cut(s) 686
SphI GCATGC 1 cut(s) 1292
SspI AATATT 1 cut(s) 759
SspMI CTAG 2 cut(s) 687, 732
StyD4I CCNGG 2 cut(s) 509, 630
StyI CCWWGG 3 cut(s) 119, 565, 999
TaaI ACNGT 3 cut(s) 214, 326, 411
TaiI ACGT 2 cut(s) 53, 980
TaqI TCGA 1 cut(s) 9
TatI WGTACW 1 cut(s) 683
TauI GCSGC 4 cut(s) 394, 436, 642, 1195
TfiI GAWTC 2 cut(s) 137, 591
Tru1I TTAA 5 cut(s) 71, 345, 744, 1079, 1328
Tru9I TTAA 5 cut(s) 71, 345, 744, 1079, 1328
TseFI GTSAC 1 cut(s) 978
TseI GCWGC 1 cut(s) 272
Tsp45I GTSAC 1 cut(s) 978
TspDTI ATGAA 5 cut(s) 17, 309, 966, 1064, 1099
TspGWI ACGGA 1 cut(s) 130
VpaK11BI GGWCC 6 cut(s) 147, 507, 569, 627, 918, 1025
XapI RAATTY 2 cut(s) 879, 1345
XceI RCATGY 1 cut(s) 1292
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
XmiI GTMKAC 1 cut(s) 9
XspI CTAG 2 cut(s) 687, 732
ZrmI AGTACT 1 cut(s) 685
Zsp2I ATGCAT 1 cut(s) 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.