RLG00000000586

Glutamyl endopeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0002809
Physical Location & Seq
Forward (+)
2272199 .. 2274074
1876 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000586

Sequence Viewer

Length: 948 bp
ATGGTCAGGTACCAGAGAAAGGATGGGGTTCAACTAACTGCAACACTATATCTTCCGCCAGGCTACGATCCATCCAGAGATGGCCCTCTTCCATGTTTGGTTTGGTCTTACCCTGGAGAATTCAAAAGCAAAGATGCTGCCGGACAAGTTCGTGGTTCTCCTAATGAATTTGCTGGGATAGGTCCAACATCAGCCCTGCTCTGGATGGCTCGAAGGTTTGCTATTTTATCTGGACCAACTATTCCTATTATTGGTGAGGGTGATGATGAAGCAAATGATAGGTATGTGGAGCAATTGGTTGCAAGTGCAGAGGCTGCTGTGGAGGAAGTCATTCGACGTGGAGTGGCTCATCCAAAGAAAATTGCTGTTGGGGGACATTCATATGGGGCATTCATGACTGCAAACCTACTGGCACATGCTCCTCATCCTTTTGCTTGTGGAATTGCTCGTTCGGGTGCTTACAATAGAACACTTAATCCTTTCGGTTTTCAGAATGAGGAGAGAACTCTTTGGGAGGCTACTATTACTTATGTGGAGATGAGTCCTTTCTTGTCGGCTAATAAAATTAAGAAGCCAATCTTGCTTATCCATGGAGAGGAAGACAGTAATCCAGTGACTTTAACCATGCAGTCCAATCGTTTCTTTAATGCTCTGAAAGGTCATGGTGCTCTTTGCCGCCTTGTGATTCTTCCCTTTGAGAGCCATGGCTATGCTGCAAGAGAGAACACTTCTGATGTAAATGTTAATCAAGATGCATGCAAGGACAATGTAAGCACAGGATCTACAAATTCTGAAAGCAAAGCAGTGGCTACTGGCGGAGGCAGTGGCTCAGAAGTGTCAAATTCTGAGCATGAAGGAGTTTACTCACCAGTGGCTACTGGCGGAGGCAGTGGCTCAGAAGTGTCAAATTCTGAGCATGAAGGAGTTTACTCTTTGCCAAGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S9

Protein Analysis

316

Amino Acids

33.72

Weight (kDa)

5.64

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S9 PF00326 103 - 243 9.9e-21 Prolyl oligopeptidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 9
AccB1I GGYRCC 1 cut(s) 9
AciI CCGC 4 cut(s) 56, 676, 816, 882
AclWI GGATC 2 cut(s) 62, 787
AcsI RAATTY 5 cut(s) 119, 167, 787, 841, 907
AfaI GTAC 1 cut(s) 11
AfiI CCNNNNNNNGG 4 cut(s) 19, 201, 251, 595
AgsI TTSAA 2 cut(s) 32, 124
AjiI CACGTC 1 cut(s) 338
AjnI CCWGG 2 cut(s) 58, 112
AloI GAACNNNNNNTCC 2 cut(s) 460, 492
Alw21I GWGCWC 1 cut(s) 670
AlwI GGATC 2 cut(s) 62, 787
AlwNI CAGNNNCTG 1 cut(s) 314
AoxI GGCC 1 cut(s) 82
ApeKI GCWGC 3 cut(s) 137, 314, 713
ApoI RAATTY 5 cut(s) 119, 167, 787, 841, 907
Asp700I GAANNNNTTC 1 cut(s) 330
Asp718I GGTACC 1 cut(s) 9
AspS9I GGNCC 3 cut(s) 83, 182, 233
AsuHPI GGTGA 3 cut(s) 266, 272, 858
AvaII GGWCC 2 cut(s) 182, 233
BanI GGYRCC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 606
Bbv12I GWGCWC 1 cut(s) 670
BbvI GCAGC 3 cut(s) 124, 301, 700
BccI CCATC 4 cut(s) 17, 74, 79, 199
BcgI CGANNNNNNTGC 2 cut(s) 617, 651
BciT130I CCWGG 2 cut(s) 60, 114
BisI GCNGC 4 cut(s) 138, 315, 676, 714
BlsI GCNGC 4 cut(s) 139, 316, 677, 715
Bme1390I CCNGG 2 cut(s) 60, 114
Bme18I GGWCC 2 cut(s) 182, 233
BmgBI CACGTC 1 cut(s) 338
BmgT120I GGNCC 3 cut(s) 83, 182, 233
BmiI GGNNCC 1 cut(s) 11
BmrFI CCNGG 2 cut(s) 60, 114
BmsI GCATC 2 cut(s) 124, 742
BpiI GAAGAC 1 cut(s) 606
BpmI CTGGAG 1 cut(s) 135
BsaJI CCNNGG 3 cut(s) 112, 589, 703
Bsc4I CCNNNNNNNGG 4 cut(s) 19, 201, 251, 595
Bse1I ACTGG 5 cut(s) 414, 611, 817, 869, 883
BseBI CCWGG 2 cut(s) 60, 114
BseDI CCNNGG 3 cut(s) 112, 589, 703
BseGI GGATG 5 cut(s) 28, 71, 210, 349, 424
BseLI CCNNNNNNNGG 4 cut(s) 19, 201, 251, 595
BseMII CTCAG 4 cut(s) 837, 843, 903, 909
BseNI ACTGG 5 cut(s) 414, 611, 817, 869, 883
BseRI GAGGAG 2 cut(s) 411, 512
BseXI GCAGC 3 cut(s) 124, 301, 700
BseYI CCCAGC 1 cut(s) 173
BsgI GTGCAG 1 cut(s) 327
BshFI GGCC 1 cut(s) 84
BshNI GGYRCC 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 670
BsiSI CCGG 1 cut(s) 141
BslFI GGGAC 1 cut(s) 387
BslI CCNNNNNNNGG 4 cut(s) 19, 201, 251, 595
BsmFI GGGAC 1 cut(s) 387
BsmI GAATGC 1 cut(s) 389
BsnI GGCC 1 cut(s) 84
Bsp1286I GDGCHC 1 cut(s) 670
Bsp143I GATC 2 cut(s) 67, 779
Bsp19I CCATGG 2 cut(s) 589, 703
BspACI CCGC 4 cut(s) 56, 676, 816, 882
BspANI GGCC 1 cut(s) 84
BspCNI CTCAG 4 cut(s) 838, 842, 904, 908
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 1 cut(s) 11
BspPI GGATC 2 cut(s) 62, 787
BspT107I GGYRCC 1 cut(s) 9
BsrI ACTGG 5 cut(s) 414, 611, 817, 869, 883
BssECI CCNNGG 3 cut(s) 112, 589, 703
BssMI GATC 2 cut(s) 67, 779
BssT1I CCWWGG 2 cut(s) 589, 703
Bst2UI CCWGG 2 cut(s) 60, 114
Bst4CI ACNGT 1 cut(s) 605
Bst6I CTCTTC 1 cut(s) 93
BstAPI GCANNNNNTGC 1 cut(s) 314
BstC8I GCNNGC 1 cut(s) 757
BstDEI CTNAG 4 cut(s) 829, 846, 895, 912
BstDSI CCRYGG 2 cut(s) 589, 703
BstF5I GGATG 5 cut(s) 28, 71, 210, 349, 424
BstKTI GATC 2 cut(s) 70, 782
BstMBI GATC 2 cut(s) 67, 779
BstMWI GCNNNNNNNGC 2 cut(s) 314, 580
BstNI CCWGG 2 cut(s) 60, 114
BstNSI RCATGY 2 cut(s) 419, 759
BstSCI CCNGG 2 cut(s) 58, 112
BstV1I GCAGC 3 cut(s) 124, 301, 700
BstV2I GAAGAC 1 cut(s) 606
BstX2I RGATCY 1 cut(s) 779
BstYI RGATCY 1 cut(s) 779
BsuRI GGCC 1 cut(s) 84
BtgI CCRYGG 2 cut(s) 589, 703
BtrI CACGTC 1 cut(s) 338
BtsCI GGATG 5 cut(s) 28, 71, 210, 349, 424
BtsI GCAGTG 3 cut(s) 810, 829, 895
BtsIMutI CAGTG 5 cut(s) 618, 810, 829, 876, 895
Cac8I GCNNGC 1 cut(s) 757
CaiI CAGNNNCTG 1 cut(s) 314
CciI TCATGA 1 cut(s) 393
Cfr13I GGNCC 3 cut(s) 83, 182, 233
Csp6I GTAC 1 cut(s) 10
CviQI GTAC 1 cut(s) 10
DdeI CTNAG 4 cut(s) 829, 846, 895, 912
DpnI GATC 2 cut(s) 69, 781
DpnII GATC 2 cut(s) 67, 779
Eam1104I CTCTTC 1 cut(s) 93
EarI CTCTTC 1 cut(s) 93
EciI GGCGGA 3 cut(s) 45, 831, 897
Eco130I CCWWGG 2 cut(s) 589, 703
Eco47I GGWCC 2 cut(s) 182, 233
EcoRI GAATTC 1 cut(s) 119
EcoRII CCWGG 2 cut(s) 58, 112
EcoT14I CCWWGG 2 cut(s) 589, 703
EcoT22I ATGCAT 1 cut(s) 757
ErhI CCWWGG 2 cut(s) 589, 703
FalI AAGNNNNNCTT 2 cut(s) 563, 595
FaqI GGGAC 1 cut(s) 387
FauNDI CATATG 1 cut(s) 382
Fnu4HI GCNGC 4 cut(s) 138, 315, 676, 714
FokI GGATG 5 cut(s) 35, 58, 217, 336, 411
Fsp4HI GCNGC 4 cut(s) 138, 315, 676, 714
GluI GCNGC 4 cut(s) 138, 315, 676, 714
GsaI CCCAGC 1 cut(s) 177
GsuI CTGGAG 1 cut(s) 135
HaeIII GGCC 1 cut(s) 84
HapII CCGG 1 cut(s) 141
HinfI GANTC 2 cut(s) 541, 685
HpaII CCGG 1 cut(s) 141
HphI GGTGA 3 cut(s) 266, 272, 858
Hpy166II GTNNAC 2 cut(s) 862, 928
Hpy188I TCNGA 8 cut(s) 492, 654, 733, 793, 832, 847, 898, 913
Hpy188III TCNNGA 5 cut(s) 75, 202, 231, 394, 749
Hpy8I GTNNAC 2 cut(s) 862, 928
Hpy99I CGWCG 1 cut(s) 339
HpyAV CCTTC 3 cut(s) 207, 848, 914
HpyCH4III ACNGT 1 cut(s) 605
HpyCH4IV ACGT 1 cut(s) 337
HpyCH4V TGCA 8 cut(s) 41, 302, 308, 401, 628, 716, 755, 759
HpyF10VI GCNNNNNNNGC 2 cut(s) 314, 580
HpyF3I CTNAG 4 cut(s) 829, 846, 895, 912
HpySE526I ACGT 1 cut(s) 337
KpnI GGTACC 1 cut(s) 13
Kzo9I GATC 2 cut(s) 67, 779
LmnI GCTCC 2 cut(s) 289, 424
Lsp1109I GCAGC 3 cut(s) 124, 301, 700
LweI GCATC 2 cut(s) 124, 742
MaeII ACGT 1 cut(s) 337
MaeIII GTNAC 1 cut(s) 613
MalI GATC 2 cut(s) 69, 781
MboI GATC 2 cut(s) 67, 779
MboII GAAGA 4 cut(s) 44, 80, 611, 680
MfeI CAATTG 1 cut(s) 293
MflI RGATCY 1 cut(s) 779
MhlI GDGCHC 1 cut(s) 670
MluCI AATT 9 cut(s) 119, 167, 293, 360, 441, 564, 787, 841, 907
MlyI GAGTC 1 cut(s) 550
MmeI TCCRAC 1 cut(s) 209
Mph1103I ATGCAT 1 cut(s) 757
MroXI GAANNNNTTC 1 cut(s) 330
MseI TTAA 5 cut(s) 474, 567, 620, 645, 744
MslI CAYNNNNRTG 2 cut(s) 381, 708
MspI CCGG 1 cut(s) 141
MspR9I CCNGG 2 cut(s) 60, 114
MunI CAATTG 1 cut(s) 293
Mva1269I GAATGC 1 cut(s) 389
MvaI CCWGG 2 cut(s) 60, 114
MwoI GCNNNNNNNGC 2 cut(s) 314, 580
NcoI CCATGG 2 cut(s) 589, 703
NdeI CATATG 1 cut(s) 382
NdeII GATC 2 cut(s) 67, 779
NlaIV GGNNCC 1 cut(s) 11
NmuCI GTSAC 1 cut(s) 613
NsiI ATGCAT 1 cut(s) 757
NspI RCATGY 2 cut(s) 419, 759
PaeI GCATGC 1 cut(s) 759
PagI TCATGA 1 cut(s) 393
PctI GAATGC 1 cut(s) 389
PdmI GAANNNNTTC 1 cut(s) 330
PfeI GAWTC 1 cut(s) 685
PkrI GCNGC 4 cut(s) 139, 316, 677, 715
PleI GAGTC 1 cut(s) 549
PpsI GAGTC 1 cut(s) 549
Psp6I CCWGG 2 cut(s) 58, 112
PspFI CCCAGC 1 cut(s) 173
PspGI CCWGG 2 cut(s) 58, 112
PspN4I GGNNCC 1 cut(s) 11
PspPI GGNCC 3 cut(s) 83, 182, 233
PstNI CAGNNNCTG 1 cut(s) 314
PsuI RGATCY 1 cut(s) 779
RsaI GTAC 1 cut(s) 11
RsaNI GTAC 1 cut(s) 10
RseI CAYNNNNRTG 2 cut(s) 381, 708
SaqAI TTAA 5 cut(s) 474, 567, 620, 645, 744
SatI GCNGC 4 cut(s) 138, 315, 676, 714
Sau3AI GATC 2 cut(s) 67, 779
Sau96I GGNCC 3 cut(s) 83, 182, 233
SchI GAGTC 1 cut(s) 550
ScrFI CCNGG 2 cut(s) 60, 114
SduI GDGCHC 1 cut(s) 670
SetI ASST 7 cut(s) 11, 184, 218, 284, 340, 408, 661
SfaNI GCATC 2 cut(s) 124, 742
SinI GGWCC 2 cut(s) 182, 233
SmiMI CAYNNNNRTG 2 cut(s) 381, 708
SphI GCATGC 1 cut(s) 759
Sse9I AATT 9 cut(s) 119, 167, 293, 360, 441, 564, 787, 841, 907
SsiI CCGC 4 cut(s) 56, 676, 816, 882
StyD4I CCNGG 2 cut(s) 58, 112
StyI CCWWGG 2 cut(s) 589, 703
TaaI ACNGT 1 cut(s) 605
TaiI ACGT 1 cut(s) 340
TaqI TCGA 2 cut(s) 211, 334
TasI AATT 9 cut(s) 119, 167, 293, 360, 441, 564, 787, 841, 907
TauI GCSGC 1 cut(s) 678
TfiI GAWTC 1 cut(s) 685
Tru1I TTAA 5 cut(s) 474, 567, 620, 645, 744
Tru9I TTAA 5 cut(s) 474, 567, 620, 645, 744
TscAI CASTG 5 cut(s) 618, 810, 829, 876, 895
TseFI GTSAC 1 cut(s) 613
TseI GCWGC 3 cut(s) 137, 314, 713
Tsp45I GTSAC 1 cut(s) 613
TspDTI ATGAA 6 cut(s) 180, 282, 369, 382, 867, 933
TspRI CASTG 5 cut(s) 618, 810, 829, 876, 895
VpaK11BI GGWCC 2 cut(s) 182, 233
XapI RAATTY 5 cut(s) 119, 167, 787, 841, 907
XceI RCATGY 2 cut(s) 419, 759
XcmI CCANNNNNNNNNTGG 2 cut(s) 20, 99
XmnI GAANNNNTTC 1 cut(s) 330
Zsp2I ATGCAT 1 cut(s) 757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.