Rmu_sc0020740.1_g000001

Glutamyl endopeptidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020740.1
Physical Location & Seq
Reverse (-)
1 .. 987
987 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020740.1_g000001.1.cds

Sequence Viewer

Length: 335 bp
atgatctggtgtgctgtgcagtccgatagtttctttaatgctctgaaaggtcatggtgctctttgccgccttgtgattcttccctttgagagccatggctatgctgcaagagagagtatcatgcatgtgctgtgggaaactgacaggtggttgcaaaaatattgcgtttcagacacttctgatgtaaatgttgatcaagatgcatgtaaagacaatataggcacaggatctacaaattctgaaagcaaagcagtggctactagcggaggcagtggctcagaagtgtcaaattctgagcatgaaggagttgactctttgccgaggtcattgttatg
Functional Annotation

Protein Analysis

111

Amino Acids

12.02

Weight (kDa)

4.83

Isoelectric Point (pI)

53.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 67, 264
AclWI GGATC 1 cut(s) 235
AcsI RAATTY 2 cut(s) 235, 289
Alw21I GWGCWC 1 cut(s) 61
AlwI GGATC 1 cut(s) 235
ApeKI GCWGC 1 cut(s) 104
ApoI RAATTY 2 cut(s) 235, 289
Bbv12I GWGCWC 1 cut(s) 61
BbvI GCAGC 1 cut(s) 91
BclI TGATCA 1 cut(s) 193
BfaI CTAG 1 cut(s) 261
BisI GCNGC 2 cut(s) 67, 105
BlsI GCNGC 2 cut(s) 68, 106
BmsI GCATC 1 cut(s) 190
BsaJI CCNNGG 2 cut(s) 94, 320
BseDI CCNNGG 2 cut(s) 94, 320
BseMII CTCAG 2 cut(s) 285, 291
BseXI GCAGC 1 cut(s) 91
BsgI GTGCAG 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 61
Bsp1286I GDGCHC 1 cut(s) 61
Bsp143I GATC 3 cut(s) 3, 193, 227
Bsp19I CCATGG 1 cut(s) 94
BspACI CCGC 2 cut(s) 67, 264
BspCNI CTCAG 2 cut(s) 286, 290
BspPI GGATC 1 cut(s) 235
BssECI CCNNGG 2 cut(s) 94, 320
BssMI GATC 3 cut(s) 3, 193, 227
BssT1I CCWWGG 1 cut(s) 94
BstDEI CTNAG 2 cut(s) 277, 294
BstDSI CCRYGG 1 cut(s) 94
BstKTI GATC 3 cut(s) 6, 196, 230
BstMBI GATC 3 cut(s) 3, 193, 227
BstNSI RCATGY 2 cut(s) 128, 207
BstV1I GCAGC 1 cut(s) 91
BstX2I RGATCY 1 cut(s) 227
BstYI RGATCY 1 cut(s) 227
BtgI CCRYGG 1 cut(s) 94
BtsI GCAGTG 2 cut(s) 258, 277
BtsIMutI CAGTG 2 cut(s) 258, 277
CviAII CATG 6 cut(s) 53, 95, 121, 125, 204, 299
CviJI RGCY 4 cut(s) 93, 99, 257, 276
CviKI_1 RGCY 4 cut(s) 93, 99, 257, 276
DdeI CTNAG 2 cut(s) 277, 294
DpnI GATC 3 cut(s) 5, 195, 229
DpnII GATC 3 cut(s) 3, 193, 227
Eco130I CCWWGG 1 cut(s) 94
EcoT14I CCWWGG 1 cut(s) 94
EcoT22I ATGCAT 2 cut(s) 126, 205
ErhI CCWWGG 1 cut(s) 94
FaeI CATG 6 cut(s) 56, 98, 124, 128, 207, 302
FaiI YATR 9 cut(s) 54, 96, 102, 122, 126, 205, 218, 300, 334
FatI CATG 6 cut(s) 52, 94, 120, 124, 203, 298
FbaI TGATCA 1 cut(s) 193
Fnu4HI GCNGC 2 cut(s) 67, 105
Fsp4HI GCNGC 2 cut(s) 67, 105
FspBI CTAG 1 cut(s) 261
GluI GCNGC 2 cut(s) 67, 105
Hin1II CATG 6 cut(s) 56, 98, 124, 128, 207, 302
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HinfI GANTC 2 cut(s) 76, 311
Hpy166II GTNNAC 1 cut(s) 310
Hpy188I TCNGA 7 cut(s) 25, 45, 172, 181, 241, 280, 295
Hpy188III TCNNGA 1 cut(s) 197
Hpy8I GTNNAC 1 cut(s) 310
HpyAV CCTTC 1 cut(s) 296
HpyCH4V TGCA 5 cut(s) 19, 107, 124, 154, 203
HpyF3I CTNAG 2 cut(s) 277, 294
Hsp92II CATG 6 cut(s) 56, 98, 124, 128, 207, 302
Ksp22I TGATCA 1 cut(s) 193
Kzo9I GATC 3 cut(s) 3, 193, 227
LpnPI CCDG 2 cut(s) 130, 210
Lsp1109I GCAGC 1 cut(s) 91
LweI GCATC 1 cut(s) 190
MaeI CTAG 1 cut(s) 261
MalI GATC 3 cut(s) 5, 195, 229
MboI GATC 3 cut(s) 3, 193, 227
MboII GAAGA 1 cut(s) 71
MflI RGATCY 1 cut(s) 227
MhlI GDGCHC 1 cut(s) 61
MluCI AATT 2 cut(s) 235, 289
MlyI GAGTC 1 cut(s) 305
MnlI CCTC 2 cut(s) 260, 315
Mph1103I ATGCAT 2 cut(s) 126, 205
MseI TTAA 1 cut(s) 36
MslI CAYNNNNRTG 3 cut(s) 99, 125, 331
NcoI CCATGG 1 cut(s) 94
NdeII GATC 3 cut(s) 3, 193, 227
NlaIII CATG 6 cut(s) 56, 98, 124, 128, 207, 302
NsiI ATGCAT 2 cut(s) 126, 205
NspI RCATGY 2 cut(s) 128, 207
PfeI GAWTC 1 cut(s) 76
PkrI GCNGC 2 cut(s) 68, 106
PleI GAGTC 1 cut(s) 305
PpsI GAGTC 1 cut(s) 305
PsuI RGATCY 1 cut(s) 227
RseI CAYNNNNRTG 3 cut(s) 99, 125, 331
SaqAI TTAA 1 cut(s) 36
SatI GCNGC 2 cut(s) 67, 105
Sau3AI GATC 3 cut(s) 3, 193, 227
SchI GAGTC 1 cut(s) 305
SduI GDGCHC 1 cut(s) 61
SetI ASST 3 cut(s) 52, 149, 326
SfaNI GCATC 1 cut(s) 190
SmiMI CAYNNNNRTG 3 cut(s) 99, 125, 331
Sse9I AATT 2 cut(s) 235, 289
SsiI CCGC 2 cut(s) 67, 264
SspI AATATT 1 cut(s) 161
SspMI CTAG 1 cut(s) 261
StyI CCWWGG 1 cut(s) 94
TasI AATT 2 cut(s) 235, 289
TauI GCSGC 1 cut(s) 69
TfiI GAWTC 1 cut(s) 76
Tru1I TTAA 1 cut(s) 36
Tru9I TTAA 1 cut(s) 36
TscAI CASTG 2 cut(s) 258, 277
TseI GCWGC 1 cut(s) 104
TspDTI ATGAA 1 cut(s) 315
TspRI CASTG 2 cut(s) 258, 277
XapI RAATTY 2 cut(s) 235, 289
XceI RCATGY 2 cut(s) 128, 207
XspI CTAG 1 cut(s) 261
Zsp2I ATGCAT 2 cut(s) 126, 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.