MD00G1179200.v1.1

Glutamyl endopeptidase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
42089421 .. 42092769
3349 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1179200.v1.1.491

Sequence Viewer

Length: 1617 bp
ATGCCCAAGCCTAACCCATGGTCTACATATGACTTGGTTGAGACCCAAGATGAAGGAGATGCAAAAGTGGAAGTTTCTCCACGTGATATAATTTATACACAGCCCGCTGATCCACTAGAAGGTGAAGGGCCAACTGTCTTGCACAAACTTGATCTTCGCTTTGGAGGAATTTCTTGGTCTGATGATTCACTAGCTCTGGTTTACGAGTCTTGGTACAAAACACGGAGAACAAGAACCTGGGTGATTTCTCCTGGATCAAATGATGTCAGTCCGCGCATCCTGTTTGATAGATCGTCAGAAGATGTATATTCCGATCCTGGCTCTCCTATGCTGCGGAGAACTCCTGCTGGGACATATGTGTTAGCAAAAGTAAAGAAGGAAAACGAGGAAGGCACTTATTTACTGCTGAATGGAAATGGTGCCACACCAGAGGGAAATATCCCATTCCTCGACTTGTTTGACACAAATACAGGAAACAAAGAAAGAATATGGAAGAGTGACAAAGAAAAGTATTACGAGACTGTTGTTGCTTTAATGTCTGATGAAAAAGAAGGGGATCTGCCCATTGATCACTTGAAAATATTGACTTCTAAAGAGTCAAAAACTGAAAACACTCAGTATTCTATCATAAGCTGGCCAGAAAAGAAAGCAGTCCAAATTACAGATTTTCCTCATCCATATCCACAGCTGGCATCATTGCAGAAAGAGCTGGTCAAGTACCAGAGGAAGGATGGGGTTCAACTAACTGCAACGCTATACCTTCCACCAGGATATGATCCATCCAGAGATGGCCCTCTTCCGTGTCTGTTCTGGTCTTATCCTGGAGAGTTCAAAAGCAAAGATGCTGCTGGACAAGTTCGTGGTTCTCCTAATGAATTTGCTGGCATAGGTCCAACTTCGGCCCTCCTCTGGCTGGCTCGAAGGTTTGCTATTCTGTCTGGACCAACAATTCCTATTATTGGTGAGGGTGATGTAGAAGCAAATGATAGCTATGTGGAGCAATTGGTTGCAAGCGCAGAGGCTGCTGTGGAGGAAGTTGTTCGACGAGGAGTGGCTCATCCAGACAAAATTGCTGTTGGGGGACATTCATATGGGGCATTCATGACTGCAAACCTCTTGGCACATGCTCCCCATCTTTTCTCTTGTGGAATTGCACGTTCTGGTGCTTACAATAGAACACTTACTCCTTTTGGTTTTCAGAATGAGGATAGAACTCTTTGGGAGGCTACTAGTACTTATGTAGAGATGAGTCCTTTCATGTCCGCTAATAAAATTAAGAAGCCAATCTTGCTCATCCATGGAGAAGAAGACAGCAATTCTGGAACTTTAACCATGCAGTCGGATCGTTTCTTTAATGCTCTGAAAGGTCATGGCGCTCTGTCCCGCCTTGTGATTCTTCCATTTGAGAGTCATGGCTATGCTGCAAGAGAGAGCATCATGCACGTGCTATGGGAAAGTGATAGATGGCTTCAGAAATATTGCGTGTCAGACACTTCCAATGTAAATGCTGATTCTGATGCAAGTGAAAAAGAGAACTTAGGCACAGGTTCTACAGCTTCTGAAAGCAAACCAGTTGCTGCTAGTGGAGGCGGTGGCCCAGAGGCGTCAAATTCTTAG
Functional Annotation

Protein Analysis

539

Amino Acids

59.23

Weight (kDa)

5.13

Isoelectric Point (pI)

42.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S9 PF00326 341 - 493 2e-22 Prolyl oligopeptidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 419
AccI GTMKAC 1 cut(s) 23
AccII CGCG 1 cut(s) 274
AciI CCGC 6 cut(s) 105, 272, 334, 1263, 1384, 1590
AclWI GGATC 6 cut(s) 104, 262, 308, 564, 770, 1350
AcoI YGGCCR 1 cut(s) 635
AcsI RAATTY 3 cut(s) 168, 875, 1609
AcuI CTGAAG 1 cut(s) 1454
AcvI CACGTG 2 cut(s) 83, 1444
AcyI GRCGYC 1 cut(s) 1604
AfaI GTAC 3 cut(s) 215, 719, 1234
AfiI CCNNNNNNNGG 5 cut(s) 119, 727, 909, 913, 959
AgsI TTSAA 3 cut(s) 577, 740, 832
AhlI ACTAGT 1 cut(s) 1229
AjnI CCWGG 5 cut(s) 236, 250, 316, 766, 820
AloI GAACNNNNNNTCC 2 cut(s) 1168, 1200
AluBI AGCT 6 cut(s) 194, 633, 688, 709, 990, 1556
AluI AGCT 6 cut(s) 194, 633, 688, 709, 990, 1556
Alw26I GTCTC 2 cut(s) 35, 512
AlwI GGATC 6 cut(s) 104, 262, 308, 564, 770, 1350
AlwNI CAGNNNCTG 3 cut(s) 1022, 1559, 1577
AoxI GGCC 5 cut(s) 128, 635, 790, 900, 1594
ApeKI GCWGC 5 cut(s) 331, 845, 1022, 1421, 1577
ApoI RAATTY 3 cut(s) 168, 875, 1609
Asp700I GAANNNNTTC 1 cut(s) 1038
AspLEI GCGC 3 cut(s) 276, 1016, 1376
AspS9I GGNCC 6 cut(s) 128, 791, 890, 901, 941, 1595
AsuHPI GGTGA 4 cut(s) 134, 253, 974, 980
AvaII GGWCC 2 cut(s) 890, 941
BalI TGGCCA 1 cut(s) 637
BanI GGYRCC 1 cut(s) 419
BbrPI CACGTG 2 cut(s) 83, 1444
BbsI GAAGAC 1 cut(s) 1314
BbvI GCAGC 5 cut(s) 318, 832, 1009, 1408, 1564
BccI CCATC 5 cut(s) 725, 782, 787, 1140, 1458
BcgI CGANNNNNNTGC 2 cut(s) 1325, 1359
BciT130I CCWGG 5 cut(s) 238, 252, 318, 768, 822
BclI TGATCA 1 cut(s) 568
BcoDI GTCTC 2 cut(s) 35, 512
BcuI ACTAGT 1 cut(s) 1229
BfaI CTAG 4 cut(s) 116, 191, 1230, 1581
BfmI CTRYAG 1 cut(s) 1551
BfoI RGCGCY 1 cut(s) 1377
BisI GCNGC 5 cut(s) 332, 846, 1023, 1422, 1578
BlsI GCNGC 5 cut(s) 333, 847, 1024, 1423, 1579
BmcAI AGTACT 1 cut(s) 1234
Bme1390I CCNGG 5 cut(s) 238, 252, 318, 768, 822
Bme18I GGWCC 2 cut(s) 890, 941
BmgT120I GGNCC 6 cut(s) 128, 791, 890, 901, 941, 1595
BmiI GGNNCC 1 cut(s) 421
BmrFI CCNGG 5 cut(s) 238, 252, 318, 768, 822
BmsI GCATC 6 cut(s) 49, 285, 701, 832, 1443, 1507
BpiI GAAGAC 1 cut(s) 1314
BpmI CTGGAG 1 cut(s) 843
BsaAI YACGTR 2 cut(s) 83, 1444
BsaHI GRCGYC 1 cut(s) 1604
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 3 cut(s) 17, 237, 1297
BsaXI ACNNNNNCTCC 2 cut(s) 1168, 1198
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 727, 909, 913, 959
Bse1I ACTGG 1 cut(s) 1571
Bse3DI GCAATG 1 cut(s) 695
BseBI CCWGG 5 cut(s) 238, 252, 318, 768, 822
BseDI CCNNGG 3 cut(s) 17, 237, 1297
BseGI GGATG 6 cut(s) 276, 673, 736, 779, 1057, 1293
BseLI CCNNNNNNNGG 5 cut(s) 119, 727, 909, 913, 959
BseMI GCAATG 1 cut(s) 695
BseMII CTCAG 1 cut(s) 629
BseNI ACTGG 1 cut(s) 1571
BseRI GAGGAG 2 cut(s) 896, 1062
BseXI GCAGC 5 cut(s) 318, 832, 1009, 1408, 1564
BseYI CCCAGC 1 cut(s) 347
Bsh1236I CGCG 1 cut(s) 274
BshFI GGCC 5 cut(s) 130, 637, 792, 902, 1596
BshNI GGYRCC 1 cut(s) 419
BslFI GGGAC 3 cut(s) 364, 1095, 1366
BslI CCNNNNNNNGG 5 cut(s) 119, 727, 909, 913, 959
BsmAI GTCTC 2 cut(s) 35, 512
BsmFI GGGAC 3 cut(s) 364, 1095, 1366
BsmI GAATGC 1 cut(s) 1097
BsnI GGCC 5 cut(s) 130, 637, 792, 902, 1596
Bso31I GGTCTC 1 cut(s) 35
Bsp143I GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
Bsp19I CCATGG 2 cut(s) 17, 1297
BspACI CCGC 6 cut(s) 105, 272, 334, 1263, 1384, 1590
BspANI GGCC 5 cut(s) 130, 637, 792, 902, 1596
BspCNI CTCAG 1 cut(s) 628
BspFNI CGCG 1 cut(s) 274
BspHI TCATGA 1 cut(s) 1101
BspLI GGNNCC 1 cut(s) 421
BspPI GGATC 6 cut(s) 104, 262, 308, 564, 770, 1350
BspT107I GGYRCC 1 cut(s) 419
BspTNI GGTCTC 1 cut(s) 35
BsrDI GCAATG 1 cut(s) 695
BsrI ACTGG 1 cut(s) 1571
BssECI CCNNGG 3 cut(s) 17, 237, 1297
BssMI GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
BssNI GRCGYC 1 cut(s) 1604
BssT1I CCWWGG 2 cut(s) 17, 1297
Bst2UI CCWGG 5 cut(s) 238, 252, 318, 768, 822
Bst4CI ACNGT 2 cut(s) 136, 523
Bst6I CTCTTC 2 cut(s) 488, 801
BstACI GRCGYC 1 cut(s) 1604
BstAPI GCANNNNNTGC 1 cut(s) 1022
BstBAI YACGTR 2 cut(s) 83, 1444
BstC8I GCNNGC 6 cut(s) 105, 635, 690, 883, 915, 1012
BstDEI CTNAG 3 cut(s) 615, 1537, 1614
BstDSI CCRYGG 2 cut(s) 17, 1297
BstF5I GGATG 6 cut(s) 276, 673, 736, 779, 1057, 1293
BstFNI CGCG 1 cut(s) 274
BstH2I RGCGCY 1 cut(s) 1377
BstHHI GCGC 3 cut(s) 276, 1016, 1376
BstKTI GATC 9 cut(s) 112, 154, 257, 293, 316, 559, 571, 778, 1345
BstMAI GTCTC 2 cut(s) 35, 512
BstMBI GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
BstMWI GCNNNNNNNGC 3 cut(s) 706, 1022, 1288
BstNI CCWGG 5 cut(s) 238, 252, 318, 768, 822
BstNSI RCATGY 1 cut(s) 1127
BstSCI CCNGG 5 cut(s) 236, 250, 316, 766, 820
BstSFI CTRYAG 1 cut(s) 1551
BstUI CGCG 1 cut(s) 274
BstV1I GCAGC 5 cut(s) 318, 832, 1009, 1408, 1564
BstV2I GAAGAC 1 cut(s) 1314
BstX2I RGATCY 1 cut(s) 556
BstYI RGATCY 1 cut(s) 556
BsuRI GGCC 5 cut(s) 130, 637, 792, 902, 1596
BtgI CCRYGG 2 cut(s) 17, 1297
BtsCI GGATG 6 cut(s) 276, 673, 736, 779, 1057, 1293
Cac8I GCNNGC 6 cut(s) 105, 635, 690, 883, 915, 1012
CaiI CAGNNNCTG 3 cut(s) 1022, 1559, 1577
CciI TCATGA 1 cut(s) 1101
CfoI GCGC 3 cut(s) 276, 1016, 1376
Cfr13I GGNCC 6 cut(s) 128, 791, 890, 901, 941, 1595
CseI GACGC 1 cut(s) 1593
Csp6I GTAC 3 cut(s) 214, 718, 1233
CviAII CATG 9 cut(s) 18, 1102, 1124, 1258, 1298, 1333, 1370, 1412, 1438
CviQI GTAC 3 cut(s) 214, 718, 1233
DdeI CTNAG 3 cut(s) 615, 1537, 1614
DpnI GATC 9 cut(s) 111, 153, 256, 292, 315, 558, 570, 777, 1344
DpnII GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
EaeI YGGCCR 1 cut(s) 635
Eam1104I CTCTTC 2 cut(s) 488, 801
EarI CTCTTC 2 cut(s) 488, 801
Eco130I CCWWGG 2 cut(s) 17, 1297
Eco31I GGTCTC 1 cut(s) 35
Eco47I GGWCC 2 cut(s) 890, 941
Eco57I CTGAAG 1 cut(s) 1454
Eco72I CACGTG 2 cut(s) 83, 1444
EcoRII CCWGG 5 cut(s) 236, 250, 316, 766, 820
EcoT14I CCWWGG 2 cut(s) 17, 1297
ErhI CCWWGG 2 cut(s) 17, 1297
FaeI CATG 9 cut(s) 21, 1105, 1127, 1261, 1301, 1336, 1373, 1415, 1441
FalI AAGNNNNNCTT 2 cut(s) 1271, 1303
FaqI GGGAC 3 cut(s) 364, 1095, 1366
FatI CATG 9 cut(s) 17, 1101, 1123, 1257, 1297, 1332, 1369, 1411, 1437
FauI CCCGC 2 cut(s) 112, 1391
FauNDI CATATG 3 cut(s) 28, 355, 1090
FbaI TGATCA 1 cut(s) 568
FblI GTMKAC 1 cut(s) 23
Fnu4HI GCNGC 5 cut(s) 332, 846, 1023, 1422, 1578
FokI GGATG 6 cut(s) 263, 660, 743, 766, 1044, 1280
Fsp4HI GCNGC 5 cut(s) 332, 846, 1023, 1422, 1578
FspBI CTAG 4 cut(s) 116, 191, 1230, 1581
GlaI GCGC 3 cut(s) 275, 1015, 1375
GluI GCNGC 5 cut(s) 332, 846, 1023, 1422, 1578
GsaI CCCAGC 1 cut(s) 351
GsuI CTGGAG 1 cut(s) 843
HaeII RGCGCY 1 cut(s) 1377
HaeIII GGCC 5 cut(s) 130, 637, 792, 902, 1596
HgaI GACGC 1 cut(s) 1593
HhaI GCGC 3 cut(s) 276, 1016, 1376
Hin1I GRCGYC 1 cut(s) 1604
Hin1II CATG 9 cut(s) 21, 1105, 1127, 1261, 1301, 1336, 1373, 1415, 1441
Hin6I GCGC 3 cut(s) 274, 1014, 1374
HinP1I GCGC 3 cut(s) 274, 1014, 1374
HinfI GANTC 7 cut(s) 185, 206, 596, 1249, 1393, 1408, 1511
HphI GGTGA 4 cut(s) 134, 253, 974, 980
Hpy166II GTNNAC 2 cut(s) 24, 202
Hpy188III TCNNGA 5 cut(s) 783, 939, 1061, 1102, 1320
Hpy8I GTNNAC 2 cut(s) 24, 202
Hpy99I CGWCG 1 cut(s) 1047
HpyAV CCTTC 9 cut(s) 47, 113, 119, 370, 383, 545, 721, 770, 915
HpyCH4III ACNGT 2 cut(s) 136, 523
HpyCH4IV ACGT 3 cut(s) 82, 1156, 1443
HpyF10VI GCNNNNNNNGC 3 cut(s) 706, 1022, 1288
HpyF3I CTNAG 3 cut(s) 615, 1537, 1614
HpySE526I ACGT 3 cut(s) 82, 1156, 1443
Hsp92I GRCGYC 1 cut(s) 1604
Hsp92II CATG 9 cut(s) 21, 1105, 1127, 1261, 1301, 1336, 1373, 1415, 1441
HspAI GCGC 3 cut(s) 274, 1014, 1374
Ksp22I TGATCA 1 cut(s) 568
Kzo9I GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
LmnI GCTCC 2 cut(s) 997, 1132
Lsp1109I GCAGC 5 cut(s) 318, 832, 1009, 1408, 1564
LweI GCATC 6 cut(s) 49, 285, 701, 832, 1443, 1507
MaeI CTAG 4 cut(s) 116, 191, 1230, 1581
MaeII ACGT 3 cut(s) 82, 1156, 1443
MaeIII GTNAC 1 cut(s) 497
MalI GATC 9 cut(s) 111, 153, 256, 292, 315, 558, 570, 777, 1344
MboI GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
MboII GAAGA 7 cut(s) 146, 311, 505, 788, 1316, 1319, 1388
MfeI CAATTG 1 cut(s) 1001
MflI RGATCY 1 cut(s) 556
MlsI TGGCCA 1 cut(s) 637
MluNI TGGCCA 1 cut(s) 637
MlyI GAGTC 4 cut(s) 215, 605, 1258, 1417
MmeI TCCRAC 2 cut(s) 917, 1320
Mox20I TGGCCA 1 cut(s) 637
MroXI GAANNNNTTC 1 cut(s) 1038
MscI TGGCCA 1 cut(s) 637
MseI TTAA 4 cut(s) 533, 1275, 1328, 1353
MslI CAYNNNNRTG 3 cut(s) 1089, 1416, 1442
Msp20I TGGCCA 1 cut(s) 637
MspA1I CMGCKG 2 cut(s) 107, 688
MspR9I CCNGG 5 cut(s) 238, 252, 318, 768, 822
MunI CAATTG 1 cut(s) 1001
Mva1269I GAATGC 1 cut(s) 1097
MvaI CCWGG 5 cut(s) 238, 252, 318, 768, 822
MvnI CGCG 1 cut(s) 274
MwoI GCNNNNNNNGC 3 cut(s) 706, 1022, 1288
NcoI CCATGG 2 cut(s) 17, 1297
NdeI CATATG 3 cut(s) 28, 355, 1090
NdeII GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
NlaIII CATG 9 cut(s) 21, 1105, 1127, 1261, 1301, 1336, 1373, 1415, 1441
NlaIV GGNNCC 1 cut(s) 421
NmuCI GTSAC 1 cut(s) 497
NspI RCATGY 1 cut(s) 1127
PagI TCATGA 1 cut(s) 1101
PctI GAATGC 1 cut(s) 1097
PdmI GAANNNNTTC 1 cut(s) 1038
PfeI GAWTC 3 cut(s) 185, 1393, 1511
PfoI TCCNGGA 2 cut(s) 250, 820
PkrI GCNGC 5 cut(s) 333, 847, 1024, 1423, 1579
PleI GAGTC 4 cut(s) 214, 604, 1257, 1416
PmaCI CACGTG 2 cut(s) 83, 1444
PmlI CACGTG 2 cut(s) 83, 1444
PpsI GAGTC 4 cut(s) 214, 604, 1257, 1416
Ppu21I YACGTR 2 cut(s) 83, 1444
Psp6I CCWGG 5 cut(s) 236, 250, 316, 766, 820
PspCI CACGTG 2 cut(s) 83, 1444
PspFI CCCAGC 1 cut(s) 347
PspGI CCWGG 5 cut(s) 236, 250, 316, 766, 820
PspN4I GGNNCC 1 cut(s) 421
PspPI GGNCC 6 cut(s) 128, 791, 890, 901, 941, 1595
PstNI CAGNNNCTG 3 cut(s) 1022, 1559, 1577
PsuI RGATCY 1 cut(s) 556
PvuII CAGCTG 1 cut(s) 688
RsaI GTAC 3 cut(s) 215, 719, 1234
RsaNI GTAC 3 cut(s) 214, 718, 1233
RseI CAYNNNNRTG 3 cut(s) 1089, 1416, 1442
SaqAI TTAA 4 cut(s) 533, 1275, 1328, 1353
SatI GCNGC 5 cut(s) 332, 846, 1023, 1422, 1578
Sau3AI GATC 9 cut(s) 109, 151, 254, 290, 313, 556, 568, 775, 1342
Sau96I GGNCC 6 cut(s) 128, 791, 890, 901, 941, 1595
ScaI AGTACT 1 cut(s) 1234
SchI GAGTC 4 cut(s) 215, 605, 1258, 1417
ScrFI CCNGG 5 cut(s) 238, 252, 318, 768, 822
SfaNI GCATC 6 cut(s) 49, 285, 701, 832, 1443, 1507
SfcI CTRYAG 1 cut(s) 1551
SinI GGWCC 2 cut(s) 890, 941
SmiMI CAYNNNNRTG 3 cut(s) 1089, 1416, 1442
SpeI ACTAGT 1 cut(s) 1229
SsiI CCGC 6 cut(s) 105, 272, 334, 1263, 1384, 1590
SspI AATATT 2 cut(s) 582, 1478
SspMI CTAG 4 cut(s) 116, 191, 1230, 1581
StyD4I CCNGG 5 cut(s) 236, 250, 316, 766, 820
StyI CCWWGG 2 cut(s) 17, 1297
TaaI ACNGT 2 cut(s) 136, 523
TaiI ACGT 3 cut(s) 85, 1159, 1446
TaqI TCGA 3 cut(s) 450, 919, 1042
TatI WGTACW 1 cut(s) 1232
TfiI GAWTC 3 cut(s) 185, 1393, 1511
Tru1I TTAA 4 cut(s) 533, 1275, 1328, 1353
Tru9I TTAA 4 cut(s) 533, 1275, 1328, 1353
TseFI GTSAC 1 cut(s) 497
TseI GCWGC 5 cut(s) 331, 845, 1022, 1421, 1577
Tsp45I GTSAC 1 cut(s) 497
TspDTI ATGAA 6 cut(s) 66, 558, 888, 1077, 1090, 1246
TspGWI ACGGA 2 cut(s) 238, 789
VpaK11BI GGWCC 2 cut(s) 890, 941
XapI RAATTY 3 cut(s) 168, 875, 1609
XceI RCATGY 1 cut(s) 1127
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XmiI GTMKAC 1 cut(s) 23
XmnI GAANNNNTTC 1 cut(s) 1038
XspI CTAG 4 cut(s) 116, 191, 1230, 1581
ZrmI AGTACT 1 cut(s) 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.