TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MFAP1 | PF06991 | 171 - 392 | 1.4e-76 | Microfibril-associated/Pre-mRNA processing |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 5 |
| Acc36I | ACCTGC | 3 cut(s) | 5, 940, 1105 |
| AccII | CGCG | 2 cut(s) | 155, 261 |
| AciI | CCGC | 3 cut(s) | 153, 155, 292 |
| AclWI | GGATC | 6 cut(s) | 212, 359, 372, 824, 1202, 1299 |
| AcoI | YGGCCR | 1 cut(s) | 1239 |
| AcsI | RAATTY | 1 cut(s) | 1041 |
| AfaI | GTAC | 1 cut(s) | 974 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 113, 187 |
| AgsI | TTSAA | 6 cut(s) | 312, 320, 507, 853, 872, 1288 |
| AjnI | CCWGG | 5 cut(s) | 94, 165, 294, 329, 812 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 629, 661 |
| AleI | CACNNNNGTG | 1 cut(s) | 984 |
| AluBI | AGCT | 4 cut(s) | 52, 104, 434, 791 |
| AluI | AGCT | 4 cut(s) | 52, 104, 434, 791 |
| Alw26I | GTCTC | 1 cut(s) | 659 |
| AlwI | GGATC | 6 cut(s) | 212, 359, 372, 824, 1202, 1299 |
| AoxI | GGCC | 3 cut(s) | 92, 618, 1239 |
| ApeKI | GCWGC | 4 cut(s) | 158, 226, 434, 1019 |
| ApoI | RAATTY | 1 cut(s) | 1041 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 176 |
| AspA2I | CCTAGG | 1 cut(s) | 221 |
| AspS9I | GGNCC | 3 cut(s) | 619, 1152, 1197 |
| AsuHPI | GGTGA | 1 cut(s) | 19 |
| AvaII | GGWCC | 2 cut(s) | 1152, 1197 |
| AvrII | CCTAGG | 1 cut(s) | 221 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 271, 304 |
| BamHI | GGATCC | 1 cut(s) | 364 |
| BauI | CACGAG | 1 cut(s) | 1050 |
| BbvI | GCAGC | 4 cut(s) | 145, 213, 421, 1006 |
| BccI | CCATC | 4 cut(s) | 128, 590, 1031, 1164 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1093, 1112, 1127, 1146 |
| BciT130I | CCWGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| BciVI | GTATCC | 2 cut(s) | 299, 1165 |
| BclI | TGATCA | 1 cut(s) | 277 |
| BcoDI | GTCTC | 1 cut(s) | 659 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BfmI | CTRYAG | 2 cut(s) | 12, 1257 |
| BfuAI | ACCTGC | 3 cut(s) | 5, 940, 1105 |
| BfuI | GTATCC | 2 cut(s) | 299, 1165 |
| BisI | GCNGC | 5 cut(s) | 156, 159, 227, 435, 1020 |
| BlnI | CCTAGG | 1 cut(s) | 221 |
| BlsI | GCNGC | 5 cut(s) | 157, 160, 228, 436, 1021 |
| Bme1390I | CCNGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| Bme18I | GGWCC | 2 cut(s) | 1152, 1197 |
| BmgT120I | GGNCC | 3 cut(s) | 619, 1152, 1197 |
| BmiI | GGNNCC | 2 cut(s) | 366, 1154 |
| BmrFI | CCNGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| BmsI | GCATC | 4 cut(s) | 112, 340, 361, 531 |
| BpmI | CTGGAG | 2 cut(s) | 188, 1092 |
| BpuEI | CTTGAG | 2 cut(s) | 530, 644 |
| BsaJI | CCNNGG | 5 cut(s) | 153, 165, 221, 564, 1193 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 113, 187 |
| Bse1I | ACTGG | 5 cut(s) | 551, 621, 997, 1075, 1187 |
| Bse3DI | GCAATG | 2 cut(s) | 738, 852 |
| BseBI | CCWGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| BseDI | CCNNGG | 5 cut(s) | 153, 165, 221, 564, 1193 |
| BseGI | GGATG | 2 cut(s) | 271, 706 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 113, 187 |
| BseMI | GCAATG | 2 cut(s) | 738, 852 |
| BseMII | CTCAG | 6 cut(s) | 44, 99, 200, 231, 528, 561 |
| BseNI | ACTGG | 5 cut(s) | 551, 621, 997, 1075, 1187 |
| BseRI | GAGGAG | 5 cut(s) | 431, 494, 497, 794, 916 |
| BseXI | GCAGC | 4 cut(s) | 145, 213, 421, 1006 |
| BsgI | GTGCAG | 2 cut(s) | 420, 918 |
| Bsh1236I | CGCG | 2 cut(s) | 155, 261 |
| BshFI | GGCC | 3 cut(s) | 94, 620, 1241 |
| BsiSI | CCGG | 1 cut(s) | 1242 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 113, 187 |
| BsmAI | GTCTC | 1 cut(s) | 659 |
| BsmI | GAATGC | 1 cut(s) | 1255 |
| BsnI | GGCC | 3 cut(s) | 94, 620, 1241 |
| Bsp143I | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| Bsp68I | TCGCGA | 1 cut(s) | 261 |
| BspACI | CCGC | 3 cut(s) | 153, 155, 292 |
| BspANI | GGCC | 3 cut(s) | 94, 620, 1241 |
| BspCNI | CTCAG | 6 cut(s) | 45, 100, 199, 232, 527, 562 |
| BspFNI | CGCG | 2 cut(s) | 155, 261 |
| BspLI | GGNNCC | 2 cut(s) | 366, 1154 |
| BspMAI | CTGCAG | 1 cut(s) | 16 |
| BspMI | ACCTGC | 3 cut(s) | 5, 940, 1105 |
| BspPI | GGATC | 6 cut(s) | 212, 359, 372, 824, 1202, 1299 |
| BsrDI | GCAATG | 2 cut(s) | 738, 852 |
| BsrI | ACTGG | 5 cut(s) | 551, 621, 997, 1075, 1187 |
| BssECI | CCNNGG | 5 cut(s) | 153, 165, 221, 564, 1193 |
| BssMI | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| BssSI | CACGAG | 1 cut(s) | 1050 |
| BssT1I | CCWWGG | 2 cut(s) | 221, 564 |
| Bst2BI | CACGAG | 1 cut(s) | 1050 |
| Bst2UI | CCWGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| Bst4CI | ACNGT | 2 cut(s) | 31, 1027 |
| BstDEI | CTNAG | 7 cut(s) | 53, 75, 108, 186, 240, 514, 570 |
| BstDSI | CCRYGG | 2 cut(s) | 153, 1193 |
| BstF5I | GGATG | 2 cut(s) | 271, 706 |
| BstFNI | CGCG | 2 cut(s) | 155, 261 |
| BstKTI | GATC | 6 cut(s) | 220, 280, 367, 819, 1210, 1294 |
| BstMAI | GTCTC | 1 cut(s) | 659 |
| BstMBI | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 740, 797, 1120, 1238 |
| BstNI | CCWGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| BstSCI | CCNGG | 5 cut(s) | 94, 165, 294, 329, 812 |
| BstSFI | CTRYAG | 2 cut(s) | 12, 1257 |
| BstUI | CGCG | 2 cut(s) | 155, 261 |
| BstV1I | GCAGC | 4 cut(s) | 145, 213, 421, 1006 |
| BstX2I | RGATCY | 1 cut(s) | 364 |
| BstYI | RGATCY | 1 cut(s) | 364 |
| BsuI | GTATCC | 2 cut(s) | 299, 1165 |
| BsuRI | GGCC | 3 cut(s) | 94, 620, 1241 |
| BtgI | CCRYGG | 2 cut(s) | 153, 1193 |
| BtgZI | GCGATG | 1 cut(s) | 568 |
| BtsCI | GGATG | 2 cut(s) | 271, 706 |
| BtsIMutI | CAGTG | 1 cut(s) | 27 |
| BtuMI | TCGCGA | 1 cut(s) | 261 |
| BveI | ACCTGC | 3 cut(s) | 5, 940, 1105 |
| Cfr13I | GGNCC | 3 cut(s) | 619, 1152, 1197 |
| Cfr42I | CCGCGG | 1 cut(s) | 156 |
| CseI | GACGC | 3 cut(s) | 218, 740, 1013 |
| Csp6I | GTAC | 1 cut(s) | 973 |
| CviAII | CATG | 4 cut(s) | 527, 964, 1016, 1111 |
| CviQI | GTAC | 1 cut(s) | 973 |
| DdeI | CTNAG | 7 cut(s) | 53, 75, 108, 186, 240, 514, 570 |
| DpnI | GATC | 6 cut(s) | 219, 279, 366, 818, 1209, 1293 |
| DpnII | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| EaeI | YGGCCR | 1 cut(s) | 1239 |
| EciI | GGCGGA | 1 cut(s) | 281 |
| Eco130I | CCWWGG | 2 cut(s) | 221, 564 |
| Eco47I | GGWCC | 2 cut(s) | 1152, 1197 |
| EcoRII | CCWGG | 5 cut(s) | 94, 165, 294, 329, 812 |
| EcoT14I | CCWWGG | 2 cut(s) | 221, 564 |
| ErhI | CCWWGG | 2 cut(s) | 221, 564 |
| FaeI | CATG | 4 cut(s) | 530, 967, 1019, 1114 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 539, 571 |
| FatI | CATG | 4 cut(s) | 526, 963, 1015, 1110 |
| FbaI | TGATCA | 1 cut(s) | 277 |
| Fnu4HI | GCNGC | 5 cut(s) | 156, 159, 227, 435, 1020 |
| FokI | GGATG | 2 cut(s) | 278, 713 |
| Fsp4HI | GCNGC | 5 cut(s) | 156, 159, 227, 435, 1020 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GluI | GCNGC | 5 cut(s) | 156, 159, 227, 435, 1020 |
| GsuI | CTGGAG | 2 cut(s) | 188, 1092 |
| HaeIII | GGCC | 3 cut(s) | 94, 620, 1241 |
| HapII | CCGG | 1 cut(s) | 1242 |
| HgaI | GACGC | 3 cut(s) | 218, 740, 1013 |
| Hin1II | CATG | 4 cut(s) | 530, 967, 1019, 1114 |
| HindIII | AAGCTT | 1 cut(s) | 789 |
| HinfI | GANTC | 3 cut(s) | 494, 512, 922 |
| HpaII | CCGG | 1 cut(s) | 1242 |
| HphI | GGTGA | 1 cut(s) | 19 |
| Hpy166II | GTNNAC | 1 cut(s) | 1197 |
| Hpy188I | TCNGA | 6 cut(s) | 199, 451, 499, 517, 695, 1003 |
| Hpy188III | TCNNGA | 7 cut(s) | 107, 188, 260, 368, 820, 1052, 1295 |
| Hpy8I | GTNNAC | 1 cut(s) | 1197 |
| Hpy99I | CGWCG | 1 cut(s) | 234 |
| HpyAV | CCTTC | 8 cut(s) | 187, 335, 387, 790, 847, 1099, 1134, 1282 |
| HpyCH4III | ACNGT | 2 cut(s) | 31, 1027 |
| HpyCH4IV | ACGT | 1 cut(s) | 592 |
| HpyCH4V | TGCA | 8 cut(s) | 14, 206, 437, 935, 967, 1022, 1114, 1253 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 740, 797, 1120, 1238 |
| HpyF3I | CTNAG | 7 cut(s) | 53, 75, 108, 186, 240, 514, 570 |
| HpySE526I | ACGT | 1 cut(s) | 592 |
| Hsp92II | CATG | 4 cut(s) | 530, 967, 1019, 1114 |
| Ksp22I | TGATCA | 1 cut(s) | 277 |
| KspI | CCGCGG | 1 cut(s) | 156 |
| Kzo9I | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| LmnI | GCTCC | 3 cut(s) | 109, 421, 1069 |
| Lsp1109I | GCAGC | 4 cut(s) | 145, 213, 421, 1006 |
| LweI | GCATC | 4 cut(s) | 112, 340, 361, 531 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MaeII | ACGT | 1 cut(s) | 592 |
| MaeIII | GTNAC | 2 cut(s) | 7, 23 |
| MalI | GATC | 6 cut(s) | 219, 279, 366, 818, 1209, 1293 |
| MboI | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| MflI | RGATCY | 1 cut(s) | 364 |
| MluCI | AATT | 6 cut(s) | 63, 303, 600, 644, 1041, 1283 |
| MlyI | GAGTC | 1 cut(s) | 506 |
| MmeI | TCCRAC | 1 cut(s) | 1091 |
| MroXI | GAANNNNTTC | 1 cut(s) | 176 |
| MseI | TTAA | 3 cut(s) | 81, 399, 768 |
| MslI | CAYNNNNRTG | 1 cut(s) | 984 |
| MspA1I | CMGCKG | 1 cut(s) | 155 |
| MspI | CCGG | 1 cut(s) | 1242 |
| MspR9I | CCNGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| Mva1269I | GAATGC | 1 cut(s) | 1255 |
| MvaI | CCWGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| MvnI | CGCG | 2 cut(s) | 155, 261 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 740, 797, 1120, 1238 |
| NdeII | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| NlaIII | CATG | 4 cut(s) | 530, 967, 1019, 1114 |
| NlaIV | GGNNCC | 2 cut(s) | 366, 1154 |
| NmuCI | GTSAC | 2 cut(s) | 7, 23 |
| NruI | TCGCGA | 1 cut(s) | 261 |
| OliI | CACNNNNGTG | 1 cut(s) | 984 |
| PaqCI | CACCTGC | 1 cut(s) | 5 |
| PctI | GAATGC | 1 cut(s) | 1255 |
| PdmI | GAANNNNTTC | 1 cut(s) | 176 |
| PfeI | GAWTC | 2 cut(s) | 494, 922 |
| PkrI | GCNGC | 5 cut(s) | 157, 160, 228, 436, 1021 |
| PleI | GAGTC | 1 cut(s) | 506 |
| PpsI | GAGTC | 1 cut(s) | 506 |
| Psp6I | CCWGG | 5 cut(s) | 94, 165, 294, 329, 812 |
| PspGI | CCWGG | 5 cut(s) | 94, 165, 294, 329, 812 |
| PspN4I | GGNNCC | 2 cut(s) | 366, 1154 |
| PspPI | GGNCC | 3 cut(s) | 619, 1152, 1197 |
| PstI | CTGCAG | 1 cut(s) | 16 |
| PsuI | RGATCY | 1 cut(s) | 364 |
| RruI | TCGCGA | 1 cut(s) | 261 |
| RsaI | GTAC | 1 cut(s) | 974 |
| RsaNI | GTAC | 1 cut(s) | 973 |
| RseI | CAYNNNNRTG | 1 cut(s) | 984 |
| SacII | CCGCGG | 1 cut(s) | 156 |
| SaqAI | TTAA | 3 cut(s) | 81, 399, 768 |
| SatI | GCNGC | 5 cut(s) | 156, 159, 227, 435, 1020 |
| Sau3AI | GATC | 6 cut(s) | 217, 277, 364, 816, 1207, 1291 |
| Sau96I | GGNCC | 3 cut(s) | 619, 1152, 1197 |
| SchI | GAGTC | 1 cut(s) | 506 |
| ScrFI | CCNGG | 5 cut(s) | 96, 167, 296, 331, 814 |
| SfaNI | GCATC | 4 cut(s) | 112, 340, 361, 531 |
| SfcI | CTRYAG | 2 cut(s) | 12, 1257 |
| Sfr303I | CCGCGG | 1 cut(s) | 156 |
| SgrBI | CCGCGG | 1 cut(s) | 156 |
| SinI | GGWCC | 2 cut(s) | 1152, 1197 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 984 |
| SmlI | CTYRAG | 2 cut(s) | 545, 623 |
| SmoI | CTYRAG | 2 cut(s) | 545, 623 |
| Sse9I | AATT | 6 cut(s) | 63, 303, 600, 644, 1041, 1283 |
| SsiI | CCGC | 3 cut(s) | 153, 155, 292 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyD4I | CCNGG | 5 cut(s) | 94, 165, 294, 329, 812 |
| StyI | CCWWGG | 2 cut(s) | 221, 564 |
| TaaI | ACNGT | 2 cut(s) | 31, 1027 |
| TaiI | ACGT | 1 cut(s) | 595 |
| TasI | AATT | 6 cut(s) | 63, 303, 600, 644, 1041, 1283 |
| TauI | GCSGC | 1 cut(s) | 158 |
| TfiI | GAWTC | 2 cut(s) | 494, 922 |
| Tru1I | TTAA | 3 cut(s) | 81, 399, 768 |
| Tru9I | TTAA | 3 cut(s) | 81, 399, 768 |
| TscAI | CASTG | 1 cut(s) | 34 |
| TseFI | GTSAC | 2 cut(s) | 7, 23 |
| TseI | GCWGC | 4 cut(s) | 158, 226, 434, 1019 |
| Tsp45I | GTSAC | 2 cut(s) | 7, 23 |
| TspDTI | ATGAA | 6 cut(s) | 144, 717, 777, 801, 952, 1262 |
| TspGWI | ACGGA | 1 cut(s) | 1182 |
| TspRI | CASTG | 1 cut(s) | 34 |
| VpaK11BI | GGWCC | 2 cut(s) | 1152, 1197 |
| XapI | RAATTY | 1 cut(s) | 1041 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 951 |
| XmaJI | CCTAGG | 1 cut(s) | 221 |
| XmnI | GAANNNNTTC | 1 cut(s) | 176 |
| XspI | CTAG | 1 cut(s) | 222 |