TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 59 - 222 | 2.9e-54 | TIR domain |
| TIR_2 | PF13676 | 61 - 157 | 1.9e-15 | TIR domain |
| NB-ARC | PF00931 | 237 - 407 | 3.8e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 479 - 550 | 3.3e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 730 - 819 | 1.9e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 739 - 824 | 1e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 873 - 970 | 4.8e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1826 |
| Acc65I | GGTACC | 1 cut(s) | 483 |
| AccB1I | GGYRCC | 2 cut(s) | 483, 3370 |
| AccBSI | CCGCTC | 1 cut(s) | 2241 |
| AccI | GTMKAC | 2 cut(s) | 2157, 3537 |
| AccII | CGCG | 1 cut(s) | 3419 |
| AciI | CCGC | 5 cut(s) | 592, 2241, 2648, 3419, 3438 |
| AclI | AACGTT | 1 cut(s) | 1734 |
| AclWI | GGATC | 2 cut(s) | 461, 474 |
| AcuI | CTGAAG | 4 cut(s) | 660, 864, 1674, 3484 |
| AflII | CTTAAG | 1 cut(s) | 2186 |
| AjnI | CCWGG | 2 cut(s) | 978, 3447 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 88, 120, 422, 454, 2984, 3016 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 741, 773, 885, 917 |
| Alw21I | GWGCWC | 1 cut(s) | 3447 |
| Alw26I | GTCTC | 5 cut(s) | 714, 2360, 2853, 2981, 3527 |
| Alw44I | GTGCAC | 1 cut(s) | 3443 |
| AlwI | GGATC | 2 cut(s) | 461, 474 |
| Ama87I | CYCGRG | 1 cut(s) | 2255 |
| ApaLI | GTGCAC | 1 cut(s) | 3443 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2980, 3012 |
| AseI | ATTAAT | 3 cut(s) | 261, 1833, 2361 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 402, 1211, 1443, 1635 |
| Asp718I | GGTACC | 1 cut(s) | 483 |
| AspLEI | GCGC | 1 cut(s) | 3419 |
| AspS9I | GGNCC | 3 cut(s) | 940, 1564, 2050 |
| AsuHPI | GGTGA | 6 cut(s) | 151, 515, 994, 1641, 2603, 3016 |
| AvaI | CYCGRG | 1 cut(s) | 2255 |
| AvaII | GGWCC | 1 cut(s) | 2050 |
| BaeGI | GKGCMC | 1 cut(s) | 3447 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1251, 1284 |
| BamHI | GGATCC | 1 cut(s) | 466 |
| BanI | GGYRCC | 2 cut(s) | 483, 3370 |
| BanII | GRGCYC | 1 cut(s) | 1995 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 482, 514, 2486, 2518 |
| BauI | CACGAG | 2 cut(s) | 711, 3300 |
| BbsI | GAAGAC | 1 cut(s) | 2738 |
| Bbv12I | GWGCWC | 1 cut(s) | 3447 |
| BccI | CCATC | 3 cut(s) | 546, 2278, 2330 |
| BceAI | ACGGC | 5 cut(s) | 576, 1297, 2566, 3589, 3598 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 567, 601, 811, 845, 1796, 1830, 2236, 2270 |
| BciT130I | CCWGG | 2 cut(s) | 980, 3449 |
| BciVI | GTATCC | 2 cut(s) | 199, 702 |
| BclI | TGATCA | 2 cut(s) | 2602, 3013 |
| BcoDI | GTCTC | 5 cut(s) | 714, 2360, 2853, 2981, 3527 |
| BfaI | CTAG | 6 cut(s) | 791, 899, 1232, 1502, 1511, 2633 |
| BfmI | CTRYAG | 1 cut(s) | 908 |
| BfrI | CTTAAG | 1 cut(s) | 2186 |
| BfuI | GTATCC | 2 cut(s) | 199, 702 |
| BglII | AGATCT | 1 cut(s) | 1583 |
| BmcAI | AGTACT | 2 cut(s) | 121, 1551 |
| Bme1390I | CCNGG | 2 cut(s) | 980, 3449 |
| Bme18I | GGWCC | 1 cut(s) | 2050 |
| BmeT110I | CYCGRG | 1 cut(s) | 2255 |
| BmgT120I | GGNCC | 3 cut(s) | 940, 1564, 2050 |
| BmiI | GGNNCC | 6 cut(s) | 468, 485, 941, 2052, 3372, 3423 |
| BmrFI | CCNGG | 2 cut(s) | 980, 3449 |
| BpiI | GAAGAC | 1 cut(s) | 2738 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 547, 579 |
| BpmI | CTGGAG | 3 cut(s) | 1086, 1634, 1869 |
| BpuEI | CTTGAG | 6 cut(s) | 364, 749, 1801, 1979, 2189, 3617 |
| BsaBI | GATNNNNATC | 2 cut(s) | 347, 1698 |
| BsaI | GGTCTC | 2 cut(s) | 2360, 3527 |
| BsaJI | CCNNGG | 3 cut(s) | 889, 1164, 1170 |
| BsaWI | WCCGGW | 1 cut(s) | 448 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 885, 915 |
| Bse1I | ACTGG | 4 cut(s) | 1048, 1852, 2475, 3165 |
| Bse3DI | GCAATG | 1 cut(s) | 1452 |
| Bse8I | GATNNNNATC | 2 cut(s) | 347, 1698 |
| BseBI | CCWGG | 2 cut(s) | 980, 3449 |
| BseDI | CCNNGG | 3 cut(s) | 889, 1164, 1170 |
| BseGI | GGATG | 9 cut(s) | 374, 400, 577, 1605, 1699, 2125, 2311, 2660, 3192 |
| BseJI | GATNNNNATC | 2 cut(s) | 347, 1698 |
| BseMI | GCAATG | 1 cut(s) | 1452 |
| BseMII | CTCAG | 1 cut(s) | 2132 |
| BseNI | ACTGG | 4 cut(s) | 1048, 1852, 2475, 3165 |
| BseRI | GAGGAG | 2 cut(s) | 144, 1784 |
| BseSI | GKGCMC | 1 cut(s) | 3447 |
| BseYI | CCCAGC | 2 cut(s) | 1903, 2414 |
| BsgI | GTGCAG | 2 cut(s) | 297, 547 |
| Bsh1236I | CGCG | 1 cut(s) | 3419 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2671, 3537 |
| BshNI | GGYRCC | 2 cut(s) | 483, 3370 |
| BsiEI | CGRYCG | 2 cut(s) | 2671, 3537 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3447 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2255 |
| BsiSI | CCGG | 3 cut(s) | 449, 943, 2953 |
| BslFI | GGGAC | 2 cut(s) | 2036, 3575 |
| BsmAI | GTCTC | 5 cut(s) | 714, 2360, 2853, 2981, 3527 |
| BsmBI | CGTCTC | 1 cut(s) | 2981 |
| BsmFI | GGGAC | 2 cut(s) | 2036, 3575 |
| BsmI | GAATGC | 1 cut(s) | 1213 |
| Bso31I | GGTCTC | 2 cut(s) | 2360, 3527 |
| BsoBI | CYCGRG | 1 cut(s) | 2255 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1995, 3447 |
| Bsp1407I | TGTACA | 3 cut(s) | 715, 2105, 3226 |
| Bsp143I | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| Bsp19I | CCATGG | 1 cut(s) | 889 |
| BspACI | CCGC | 5 cut(s) | 592, 2241, 2648, 3419, 3438 |
| BspCNI | CTCAG | 1 cut(s) | 2131 |
| BspFNI | CGCG | 1 cut(s) | 3419 |
| BspHI | TCATGA | 1 cut(s) | 1687 |
| BspLI | GGNNCC | 6 cut(s) | 468, 485, 941, 2052, 3372, 3423 |
| BspPI | GGATC | 2 cut(s) | 461, 474 |
| BspQI | GCTCTTC | 1 cut(s) | 276 |
| BspT107I | GGYRCC | 2 cut(s) | 483, 3370 |
| BspTI | CTTAAG | 1 cut(s) | 2186 |
| BspTNI | GGTCTC | 2 cut(s) | 2360, 3527 |
| BsrBI | CCGCTC | 1 cut(s) | 2241 |
| BsrDI | GCAATG | 1 cut(s) | 1452 |
| BsrGI | TGTACA | 3 cut(s) | 715, 2105, 3226 |
| BsrI | ACTGG | 4 cut(s) | 1048, 1852, 2475, 3165 |
| BssECI | CCNNGG | 3 cut(s) | 889, 1164, 1170 |
| BssMI | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| BssSI | CACGAG | 2 cut(s) | 711, 3300 |
| BssT1I | CCWWGG | 3 cut(s) | 889, 1164, 1170 |
| Bst2BI | CACGAG | 2 cut(s) | 711, 3300 |
| Bst2UI | CCWGG | 2 cut(s) | 980, 3449 |
| Bst4CI | ACNGT | 6 cut(s) | 483, 503, 2507, 2591, 2672, 3108 |
| Bst6I | CTCTTC | 6 cut(s) | 154, 276, 327, 636, 1761, 3462 |
| BstAFI | CTTAAG | 1 cut(s) | 2186 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1609 |
| BstAUI | TGTACA | 3 cut(s) | 715, 2105, 3226 |
| BstC8I | GCNNGC | 4 cut(s) | 1347, 1497, 1663, 2755 |
| BstDEI | CTNAG | 6 cut(s) | 287, 566, 618, 1018, 2018, 2118 |
| BstDSI | CCRYGG | 1 cut(s) | 889 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2045 |
| BstF5I | GGATG | 9 cut(s) | 374, 400, 577, 1605, 1699, 2125, 2311, 2660, 3192 |
| BstFNI | CGCG | 1 cut(s) | 3419 |
| BstHHI | GCGC | 1 cut(s) | 3419 |
| BstKTI | GATC | 7 cut(s) | 49, 469, 636, 1586, 2605, 3016, 3648 |
| BstMAI | GTCTC | 5 cut(s) | 714, 2360, 2853, 2981, 3527 |
| BstMBI | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| BstMCI | CGRYCG | 2 cut(s) | 2671, 3537 |
| BstNI | CCWGG | 2 cut(s) | 980, 3449 |
| BstNSI | RCATGY | 2 cut(s) | 1349, 1461 |
| BstSCI | CCNGG | 2 cut(s) | 978, 3447 |
| BstSFI | CTRYAG | 1 cut(s) | 908 |
| BstSLI | GKGCMC | 1 cut(s) | 3447 |
| BstUI | CGCG | 1 cut(s) | 3419 |
| BstV2I | GAAGAC | 1 cut(s) | 2738 |
| BstX2I | RGATCY | 2 cut(s) | 466, 1583 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1171 |
| BstYI | RGATCY | 2 cut(s) | 466, 1583 |
| BsuI | GTATCC | 2 cut(s) | 199, 702 |
| BtgI | CCRYGG | 1 cut(s) | 889 |
| BtsCI | GGATG | 9 cut(s) | 374, 400, 577, 1605, 1699, 2125, 2311, 2660, 3192 |
| Cac8I | GCNNGC | 4 cut(s) | 1347, 1497, 1663, 2755 |
| CciI | TCATGA | 1 cut(s) | 1687 |
| CfoI | GCGC | 1 cut(s) | 3419 |
| Cfr13I | GGNCC | 3 cut(s) | 940, 1564, 2050 |
| CseI | GACGC | 1 cut(s) | 3350 |
| CsiI | ACCWGGT | 1 cut(s) | 3447 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2820, 2855, 3082, 3117 |
| DdeI | CTNAG | 6 cut(s) | 287, 566, 618, 1018, 2018, 2118 |
| DpnI | GATC | 7 cut(s) | 48, 468, 635, 1585, 2604, 3015, 3647 |
| DpnII | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| DraI | TTTAAA | 2 cut(s) | 678, 2026 |
| Eam1104I | CTCTTC | 6 cut(s) | 154, 276, 327, 636, 1761, 3462 |
| EarI | CTCTTC | 6 cut(s) | 154, 276, 327, 636, 1761, 3462 |
| EciI | GGCGGA | 1 cut(s) | 607 |
| Eco130I | CCWWGG | 3 cut(s) | 889, 1164, 1170 |
| Eco147I | AGGCCT | 3 cut(s) | 137, 897, 1169 |
| Eco24I | GRGCYC | 1 cut(s) | 1995 |
| Eco31I | GGTCTC | 2 cut(s) | 2360, 3527 |
| Eco32I | GATATC | 2 cut(s) | 724, 1387 |
| Eco47I | GGWCC | 1 cut(s) | 2050 |
| Eco57I | CTGAAG | 4 cut(s) | 660, 864, 1674, 3484 |
| Eco88I | CYCGRG | 1 cut(s) | 2255 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2045 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1564, 2050 |
| EcoRI | GAATTC | 1 cut(s) | 3029 |
| EcoRII | CCWGG | 2 cut(s) | 978, 3447 |
| EcoRV | GATATC | 2 cut(s) | 724, 1387 |
| EcoT14I | CCWWGG | 3 cut(s) | 889, 1164, 1170 |
| EcoT22I | ATGCAT | 1 cut(s) | 1605 |
| EcoT38I | GRGCYC | 1 cut(s) | 1995 |
| ErhI | CCWWGG | 3 cut(s) | 889, 1164, 1170 |
| Esp3I | CGTCTC | 1 cut(s) | 2981 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 711, 743 |
| FaqI | GGGAC | 2 cut(s) | 2036, 3575 |
| FauI | CCCGC | 1 cut(s) | 2641 |
| FauNDI | CATATG | 1 cut(s) | 1921 |
| FbaI | TGATCA | 2 cut(s) | 2602, 3013 |
| FblI | GTMKAC | 2 cut(s) | 2157, 3537 |
| FokI | GGATG | 9 cut(s) | 361, 407, 584, 1612, 1706, 2112, 2318, 2667, 3199 |
| FriOI | GRGCYC | 1 cut(s) | 1995 |
| FspBI | CTAG | 6 cut(s) | 791, 899, 1232, 1502, 1511, 2633 |
| GlaI | GCGC | 1 cut(s) | 3418 |
| GsaI | CCCAGC | 2 cut(s) | 1907, 2418 |
| GsuI | CTGGAG | 3 cut(s) | 1086, 1634, 1869 |
| HapII | CCGG | 3 cut(s) | 449, 943, 2953 |
| HgaI | GACGC | 1 cut(s) | 3350 |
| HhaI | GCGC | 1 cut(s) | 3419 |
| Hin6I | GCGC | 1 cut(s) | 3417 |
| HinP1I | GCGC | 1 cut(s) | 3417 |
| HincII | GTYRAC | 5 cut(s) | 1845, 2158, 2209, 2379, 3538 |
| HindII | GTYRAC | 5 cut(s) | 1845, 2158, 2209, 2379, 3538 |
| HindIII | AAGCTT | 1 cut(s) | 2150 |
| HpaII | CCGG | 3 cut(s) | 449, 943, 2953 |
| HphI | GGTGA | 6 cut(s) | 151, 515, 994, 1641, 2603, 3016 |
| HpyCH4III | ACNGT | 6 cut(s) | 483, 503, 2507, 2591, 2672, 3108 |
| HpyCH4IV | ACGT | 3 cut(s) | 1669, 1734, 2525 |
| HpyF3I | CTNAG | 6 cut(s) | 287, 566, 618, 1018, 2018, 2118 |
| HpySE526I | ACGT | 3 cut(s) | 1669, 1734, 2525 |
| HspAI | GCGC | 1 cut(s) | 3417 |
| KpnI | GGTACC | 1 cut(s) | 487 |
| Ksp22I | TGATCA | 2 cut(s) | 2602, 3013 |
| Kzo9I | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| LguI | GCTCTTC | 1 cut(s) | 276 |
| LmnI | GCTCC | 2 cut(s) | 2824, 3287 |
| MabI | ACCWGGT | 1 cut(s) | 3447 |
| MaeI | CTAG | 6 cut(s) | 791, 899, 1232, 1502, 1511, 2633 |
| MaeII | ACGT | 3 cut(s) | 1669, 1734, 2525 |
| MaeIII | GTNAC | 3 cut(s) | 1190, 1361, 1647 |
| MalI | GATC | 7 cut(s) | 48, 468, 635, 1585, 2604, 3015, 3647 |
| MbiI | CCGCTC | 1 cut(s) | 2241 |
| MboI | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| MfeI | CAATTG | 7 cut(s) | 327, 437, 804, 1254, 2006, 2343, 2947 |
| MflI | RGATCY | 2 cut(s) | 466, 1583 |
| MhlI | GDGCHC | 2 cut(s) | 1995, 3447 |
| MlyI | GAGTC | 4 cut(s) | 344, 716, 1655, 3352 |
| MmeI | TCCRAC | 4 cut(s) | 679, 1032, 2546, 2691 |
| Mph1103I | ATGCAT | 1 cut(s) | 1605 |
| MroXI | GAANNNNTTC | 4 cut(s) | 402, 1211, 1443, 1635 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1692, 2386 |
| MspCI | CTTAAG | 1 cut(s) | 2186 |
| MspI | CCGG | 3 cut(s) | 449, 943, 2953 |
| MspR9I | CCNGG | 2 cut(s) | 980, 3449 |
| MunI | CAATTG | 7 cut(s) | 327, 437, 804, 1254, 2006, 2343, 2947 |
| Mva1269I | GAATGC | 1 cut(s) | 1213 |
| MvaI | CCWGG | 2 cut(s) | 980, 3449 |
| MvnI | CGCG | 1 cut(s) | 3419 |
| NcoI | CCATGG | 1 cut(s) | 889 |
| NdeI | CATATG | 1 cut(s) | 1921 |
| NdeII | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| NlaIV | GGNNCC | 6 cut(s) | 468, 485, 941, 2052, 3372, 3423 |
| NmuCI | GTSAC | 1 cut(s) | 1647 |
| NsiI | ATGCAT | 1 cut(s) | 1605 |
| NspI | RCATGY | 2 cut(s) | 1349, 1461 |
| PaeI | GCATGC | 1 cut(s) | 1349 |
| PaeR7I | CTCGAG | 1 cut(s) | 2255 |
| PagI | TCATGA | 1 cut(s) | 1687 |
| PceI | AGGCCT | 3 cut(s) | 137, 897, 1169 |
| PciSI | GCTCTTC | 1 cut(s) | 276 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1975 |
| PctI | GAATGC | 1 cut(s) | 1213 |
| PdmI | GAANNNNTTC | 4 cut(s) | 402, 1211, 1443, 1635 |
| PleI | GAGTC | 4 cut(s) | 343, 715, 1654, 3351 |
| PpsI | GAGTC | 4 cut(s) | 343, 715, 1654, 3351 |
| PpuMI | RGGWCCY | 1 cut(s) | 2050 |
| PshBI | ATTAAT | 3 cut(s) | 261, 1833, 2361 |
| PsiI | TTATAA | 1 cut(s) | 1826 |
| Psp1406I | AACGTT | 1 cut(s) | 1734 |
| Psp5II | RGGWCCY | 1 cut(s) | 2050 |
| Psp6I | CCWGG | 2 cut(s) | 978, 3447 |
| PspFI | CCCAGC | 2 cut(s) | 1903, 2414 |
| PspGI | CCWGG | 2 cut(s) | 978, 3447 |
| PspN4I | GGNNCC | 6 cut(s) | 468, 485, 941, 2052, 3372, 3423 |
| PspPI | GGNCC | 3 cut(s) | 940, 1564, 2050 |
| PspPPI | RGGWCCY | 1 cut(s) | 2050 |
| PsuI | RGATCY | 2 cut(s) | 466, 1583 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1692, 2386 |
| SalI | GTCGAC | 2 cut(s) | 2156, 3536 |
| SapI | GCTCTTC | 1 cut(s) | 276 |
| Sau3AI | GATC | 7 cut(s) | 46, 466, 633, 1583, 2602, 3013, 3645 |
| Sau96I | GGNCC | 3 cut(s) | 940, 1564, 2050 |
| ScaI | AGTACT | 2 cut(s) | 121, 1551 |
| SchI | GAGTC | 4 cut(s) | 344, 716, 1655, 3352 |
| ScrFI | CCNGG | 2 cut(s) | 980, 3449 |
| SduI | GDGCHC | 2 cut(s) | 1995, 3447 |
| SexAI | ACCWGGT | 1 cut(s) | 3447 |
| SfcI | CTRYAG | 1 cut(s) | 908 |
| Sfr274I | CTCGAG | 1 cut(s) | 2255 |
| SinI | GGWCC | 1 cut(s) | 2050 |
| SlaI | CTCGAG | 1 cut(s) | 2255 |
| SmiI | ATTTAAAT | 1 cut(s) | 678 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1692, 2386 |
| SmlI | CTYRAG | 8 cut(s) | 379, 728, 1780, 1994, 2168, 2186, 2255, 3632 |
| SmoI | CTYRAG | 8 cut(s) | 379, 728, 1780, 1994, 2168, 2186, 2255, 3632 |
| SphI | GCATGC | 1 cut(s) | 1349 |
| SseBI | AGGCCT | 3 cut(s) | 137, 897, 1169 |
| SsiI | CCGC | 5 cut(s) | 592, 2241, 2648, 3419, 3438 |
| SspMI | CTAG | 6 cut(s) | 791, 899, 1232, 1502, 1511, 2633 |
| StuI | AGGCCT | 3 cut(s) | 137, 897, 1169 |
| StyD4I | CCNGG | 2 cut(s) | 978, 3447 |
| StyI | CCWWGG | 3 cut(s) | 889, 1164, 1170 |
| SwaI | ATTTAAAT | 1 cut(s) | 678 |
| TaaI | ACNGT | 6 cut(s) | 483, 503, 2507, 2591, 2672, 3108 |
| TaiI | ACGT | 3 cut(s) | 1672, 1737, 2528 |
| TaqII | GACCGA | 2 cut(s) | 1727, 3523 |
| TatI | WGTACW | 8 cut(s) | 119, 715, 1267, 1549, 2105, 2660, 3226, 3235 |
| TauI | GCSGC | 1 cut(s) | 2244 |
| TseFI | GTSAC | 1 cut(s) | 1647 |
| Tsp45I | GTSAC | 1 cut(s) | 1647 |
| TspGWI | ACGGA | 6 cut(s) | 1419, 2455, 3199, 3312, 3336, 3354 |
| Vha464I | CTTAAG | 1 cut(s) | 2186 |
| VneI | GTGCAC | 1 cut(s) | 3443 |
| VpaK11BI | GGWCC | 1 cut(s) | 2050 |
| VspI | ATTAAT | 3 cut(s) | 261, 1833, 2361 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2045 |
| XbaI | TCTAGA | 1 cut(s) | 1231 |
| XceI | RCATGY | 2 cut(s) | 1349, 1461 |
| XhoI | CTCGAG | 1 cut(s) | 2255 |
| XmiI | GTMKAC | 2 cut(s) | 2157, 3537 |
| XmnI | GAANNNNTTC | 4 cut(s) | 402, 1211, 1443, 1635 |
| XspI | CTAG | 6 cut(s) | 791, 899, 1232, 1502, 1511, 2633 |
| ZrmI | AGTACT | 2 cut(s) | 121, 1551 |
| Zsp2I | ATGCAT | 1 cut(s) | 1605 |