regulation of response to stimulus
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 271 |
| AccII | CGCG | 1 cut(s) | 439 |
| AciI | CCGC | 3 cut(s) | 133, 385, 399 |
| AclWI | GGATC | 1 cut(s) | 290 |
| AcsI | RAATTY | 1 cut(s) | 237 |
| AdeI | CACNNNGTG | 1 cut(s) | 216 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 31, 271 |
| AgsI | TTSAA | 1 cut(s) | 223 |
| AluBI | AGCT | 4 cut(s) | 74, 145, 338, 390 |
| AluI | AGCT | 4 cut(s) | 74, 145, 338, 390 |
| Alw21I | GWGCWC | 2 cut(s) | 76, 147 |
| AlwI | GGATC | 1 cut(s) | 290 |
| Ama87I | CYCGRG | 1 cut(s) | 408 |
| AoxI | GGCC | 1 cut(s) | 355 |
| ApoI | RAATTY | 1 cut(s) | 237 |
| AspS9I | GGNCC | 2 cut(s) | 274, 396 |
| AvaI | CYCGRG | 1 cut(s) | 408 |
| AvaII | GGWCC | 2 cut(s) | 274, 396 |
| BanII | GRGCYC | 2 cut(s) | 76, 147 |
| BbsI | GAAGAC | 1 cut(s) | 42 |
| Bbv12I | GWGCWC | 2 cut(s) | 76, 147 |
| BccI | CCATC | 2 cut(s) | 69, 307 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 34, 68 |
| BglII | AGATCT | 1 cut(s) | 115 |
| Bme18I | GGWCC | 2 cut(s) | 274, 396 |
| BmeT110I | CYCGRG | 1 cut(s) | 408 |
| BmgT120I | GGNCC | 2 cut(s) | 274, 396 |
| BmiI | GGNNCC | 1 cut(s) | 276 |
| BpiI | GAAGAC | 1 cut(s) | 42 |
| BpmI | CTGGAG | 1 cut(s) | 412 |
| BsaWI | WCCGGW | 1 cut(s) | 24 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 31, 271 |
| BseGI | GGATG | 1 cut(s) | 299 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 31, 271 |
| BseMII | CTCAG | 1 cut(s) | 133 |
| BseRI | GAGGAG | 1 cut(s) | 392 |
| BseYI | CCCAGC | 1 cut(s) | 429 |
| Bsh1236I | CGCG | 1 cut(s) | 439 |
| Bsh1285I | CGRYCG | 1 cut(s) | 133 |
| BshFI | GGCC | 1 cut(s) | 357 |
| BsiEI | CGRYCG | 1 cut(s) | 133 |
| BsiHKAI | GWGCWC | 2 cut(s) | 76, 147 |
| BsiHKCI | CYCGRG | 1 cut(s) | 408 |
| BsiSI | CCGG | 2 cut(s) | 25, 426 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 31, 271 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| BsmI | GAATGC | 1 cut(s) | 251 |
| BsnI | GGCC | 1 cut(s) | 357 |
| BsoBI | CYCGRG | 1 cut(s) | 408 |
| Bsp1286I | GDGCHC | 2 cut(s) | 76, 147 |
| Bsp143I | GATC | 3 cut(s) | 115, 295, 343 |
| Bsp68I | TCGCGA | 1 cut(s) | 439 |
| BspACI | CCGC | 3 cut(s) | 133, 385, 399 |
| BspANI | GGCC | 1 cut(s) | 357 |
| BspCNI | CTCAG | 1 cut(s) | 132 |
| BspFNI | CGCG | 1 cut(s) | 439 |
| BspLI | GGNNCC | 1 cut(s) | 276 |
| BspPI | GGATC | 1 cut(s) | 290 |
| BssMI | GATC | 3 cut(s) | 115, 295, 343 |
| BstDEI | CTNAG | 1 cut(s) | 119 |
| BstF5I | GGATG | 1 cut(s) | 299 |
| BstFNI | CGCG | 1 cut(s) | 439 |
| BstKTI | GATC | 3 cut(s) | 118, 298, 346 |
| BstMBI | GATC | 3 cut(s) | 115, 295, 343 |
| BstMCI | CGRYCG | 1 cut(s) | 133 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 57 |
| BstUI | CGCG | 1 cut(s) | 439 |
| BstV2I | GAAGAC | 1 cut(s) | 42 |
| BstX2I | RGATCY | 1 cut(s) | 115 |
| BstYI | RGATCY | 1 cut(s) | 115 |
| BsuRI | GGCC | 1 cut(s) | 357 |
| BtsCI | GGATG | 1 cut(s) | 299 |
| BtuMI | TCGCGA | 1 cut(s) | 439 |
| Cfr13I | GGNCC | 2 cut(s) | 274, 396 |
| CseI | GACGC | 1 cut(s) | 68 |
| CviAII | CATG | 2 cut(s) | 350, 373 |
| DdeI | CTNAG | 1 cut(s) | 119 |
| DpnI | GATC | 3 cut(s) | 117, 297, 345 |
| DpnII | GATC | 3 cut(s) | 115, 295, 343 |
| DraIII | CACNNNGTG | 1 cut(s) | 216 |
| EciI | GGCGGA | 1 cut(s) | 388 |
| Ecl136II | GAGCTC | 2 cut(s) | 74, 145 |
| Eco24I | GRGCYC | 2 cut(s) | 76, 147 |
| Eco47I | GGWCC | 2 cut(s) | 274, 396 |
| Eco53kI | GAGCTC | 2 cut(s) | 74, 145 |
| Eco88I | CYCGRG | 1 cut(s) | 408 |
| EcoICRI | GAGCTC | 2 cut(s) | 74, 145 |
| EcoT38I | GRGCYC | 2 cut(s) | 76, 147 |
| FaeI | CATG | 2 cut(s) | 353, 376 |
| FaiI | YATR | 5 cut(s) | 67, 201, 351, 374, 447 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| FatI | CATG | 2 cut(s) | 349, 372 |
| FokI | GGATG | 1 cut(s) | 286 |
| FriOI | GRGCYC | 2 cut(s) | 76, 147 |
| GsaI | CCCAGC | 1 cut(s) | 433 |
| GsuI | CTGGAG | 1 cut(s) | 412 |
| HaeIII | GGCC | 1 cut(s) | 357 |
| HapII | CCGG | 2 cut(s) | 25, 426 |
| HgaI | GACGC | 1 cut(s) | 68 |
| Hin1II | CATG | 2 cut(s) | 353, 376 |
| HindIII | AAGCTT | 1 cut(s) | 336 |
| HinfI | GANTC | 3 cut(s) | 157, 164, 434 |
| HpaII | CCGG | 2 cut(s) | 25, 426 |
| Hpy166II | GTNNAC | 1 cut(s) | 314 |
| Hpy188I | TCNGA | 4 cut(s) | 84, 122, 142, 304 |
| Hpy188III | TCNNGA | 3 cut(s) | 148, 161, 438 |
| Hpy8I | GTNNAC | 1 cut(s) | 314 |
| Hpy99I | CGWCG | 1 cut(s) | 236 |
| HpyAV | CCTTC | 3 cut(s) | 109, 217, 347 |
| HpyCH4V | TGCA | 1 cut(s) | 249 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 57 |
| HpyF3I | CTNAG | 1 cut(s) | 119 |
| Hsp92II | CATG | 2 cut(s) | 353, 376 |
| Kzo9I | GATC | 3 cut(s) | 115, 295, 343 |
| LmnI | GCTCC | 2 cut(s) | 150, 387 |
| LpnPI | CCDG | 6 cut(s) | 31, 38, 161, 376, 415, 439 |
| MalI | GATC | 3 cut(s) | 117, 297, 345 |
| MboI | GATC | 3 cut(s) | 115, 295, 343 |
| MboII | GAAGA | 4 cut(s) | 17, 47, 125, 198 |
| MflI | RGATCY | 1 cut(s) | 115 |
| MhlI | GDGCHC | 2 cut(s) | 76, 147 |
| MluCI | AATT | 3 cut(s) | 237, 267, 418 |
| MlyI | GAGTC | 1 cut(s) | 173 |
| MnlI | CCTC | 3 cut(s) | 370, 373, 387 |
| MspI | CCGG | 2 cut(s) | 25, 426 |
| Mva1269I | GAATGC | 1 cut(s) | 251 |
| MvnI | CGCG | 1 cut(s) | 439 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 57 |
| NdeII | GATC | 3 cut(s) | 115, 295, 343 |
| NlaIII | CATG | 2 cut(s) | 353, 376 |
| NlaIV | GGNNCC | 1 cut(s) | 276 |
| NruI | TCGCGA | 1 cut(s) | 439 |
| PaeR7I | CTCGAG | 1 cut(s) | 408 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 300 |
| PctI | GAATGC | 1 cut(s) | 251 |
| PfeI | GAWTC | 2 cut(s) | 157, 434 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 271 |
| PleI | GAGTC | 1 cut(s) | 172 |
| PpsI | GAGTC | 1 cut(s) | 172 |
| Psp124BI | GAGCTC | 2 cut(s) | 76, 147 |
| PspFI | CCCAGC | 1 cut(s) | 429 |
| PspN4I | GGNNCC | 1 cut(s) | 276 |
| PspPI | GGNCC | 2 cut(s) | 274, 396 |
| PspXI | VCTCGAGB | 1 cut(s) | 408 |
| PsuI | RGATCY | 1 cut(s) | 115 |
| RruI | TCGCGA | 1 cut(s) | 439 |
| SacI | GAGCTC | 2 cut(s) | 76, 147 |
| Sau3AI | GATC | 3 cut(s) | 115, 295, 343 |
| Sau96I | GGNCC | 2 cut(s) | 274, 396 |
| SchI | GAGTC | 1 cut(s) | 173 |
| SduI | GDGCHC | 2 cut(s) | 76, 147 |
| SetI | ASST | 7 cut(s) | 76, 101, 147, 340, 384, 392, 398 |
| Sfr274I | CTCGAG | 1 cut(s) | 408 |
| SinI | GGWCC | 2 cut(s) | 274, 396 |
| SlaI | CTCGAG | 1 cut(s) | 408 |
| SmlI | CTYRAG | 1 cut(s) | 408 |
| SmoI | CTYRAG | 1 cut(s) | 408 |
| Sse9I | AATT | 3 cut(s) | 237, 267, 418 |
| SsiI | CCGC | 3 cut(s) | 133, 385, 399 |
| SstI | GAGCTC | 2 cut(s) | 76, 147 |
| TaqI | TCGA | 5 cut(s) | 160, 176, 234, 294, 409 |
| TasI | AATT | 3 cut(s) | 237, 267, 418 |
| TfiI | GAWTC | 2 cut(s) | 157, 434 |
| TspDTI | ATGAA | 2 cut(s) | 91, 366 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 271 |
| VpaK11BI | GGWCC | 2 cut(s) | 274, 396 |
| XapI | RAATTY | 1 cut(s) | 237 |
| XhoI | CTCGAG | 1 cut(s) | 408 |