TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 311 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 101 |
| AatII | GACGTC | 1 cut(s) | 249 |
| Acc36I | ACCTGC | 1 cut(s) | 311 |
| AccB1I | GGYRCC | 2 cut(s) | 359, 650 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 562 |
| AccBSI | CCGCTC | 1 cut(s) | 81 |
| AccI | GTMKAC | 1 cut(s) | 105 |
| AccII | CGCG | 1 cut(s) | 134 |
| AciI | CCGC | 6 cut(s) | 79, 357, 447, 645, 648, 705 |
| AclWI | GGATC | 3 cut(s) | 225, 238, 588 |
| AcoI | YGGCCR | 1 cut(s) | 675 |
| AcuI | CTGAAG | 1 cut(s) | 350 |
| AcyI | GRCGYC | 1 cut(s) | 246 |
| AdeI | CACNNNGTG | 1 cut(s) | 597 |
| AfaI | GTAC | 5 cut(s) | 131, 392, 464, 530, 695 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 458, 562 |
| AjnI | CCWGG | 2 cut(s) | 180, 689 |
| AluBI | AGCT | 5 cut(s) | 18, 336, 370, 588, 800 |
| AluI | AGCT | 5 cut(s) | 18, 336, 370, 588, 800 |
| Alw21I | GWGCWC | 2 cut(s) | 438, 712 |
| AlwI | GGATC | 3 cut(s) | 225, 238, 588 |
| AoxI | GGCC | 5 cut(s) | 256, 449, 524, 564, 675 |
| ApeKI | GCWGC | 4 cut(s) | 114, 370, 378, 503 |
| AspLEI | GCGC | 2 cut(s) | 136, 299 |
| AspS9I | GGNCC | 4 cut(s) | 449, 524, 543, 565 |
| AsuC2I | CCSGG | 1 cut(s) | 547 |
| AsuHPI | GGTGA | 2 cut(s) | 643, 674 |
| AvaII | GGWCC | 1 cut(s) | 543 |
| BaeGI | GKGCMC | 1 cut(s) | 364 |
| BalI | TGGCCA | 1 cut(s) | 677 |
| BamHI | GGATCC | 1 cut(s) | 230 |
| BanI | GGYRCC | 2 cut(s) | 359, 650 |
| BbsI | GAAGAC | 1 cut(s) | 767 |
| Bbv12I | GWGCWC | 2 cut(s) | 438, 712 |
| BbvI | GCAGC | 4 cut(s) | 101, 357, 365, 490 |
| BccI | CCATC | 1 cut(s) | 607 |
| BceAI | ACGGC | 5 cut(s) | 255, 271, 436, 511, 638 |
| BciT130I | CCWGG | 2 cut(s) | 182, 691 |
| BcnI | CCSGG | 1 cut(s) | 547 |
| BfaI | CTAG | 1 cut(s) | 744 |
| BfmI | CTRYAG | 1 cut(s) | 371 |
| BfuAI | ACCTGC | 1 cut(s) | 311 |
| BisI | GCNGC | 5 cut(s) | 115, 371, 379, 504, 646 |
| BlsI | GCNGC | 5 cut(s) | 116, 372, 380, 505, 647 |
| Bme1390I | CCNGG | 3 cut(s) | 182, 547, 691 |
| Bme18I | GGWCC | 1 cut(s) | 543 |
| BmgT120I | GGNCC | 4 cut(s) | 449, 524, 543, 565 |
| BmiI | GGNNCC | 5 cut(s) | 232, 361, 517, 544, 652 |
| BmrFI | CCNGG | 3 cut(s) | 182, 547, 691 |
| BmsI | GCATC | 2 cut(s) | 717, 739 |
| BpiI | GAAGAC | 1 cut(s) | 767 |
| BpuMI | CCSGG | 1 cut(s) | 547 |
| BsaHI | GRCGYC | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 3 cut(s) | 180, 271, 556 |
| BsaWI | WCCGGW | 1 cut(s) | 518 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 458, 562 |
| Bse1I | ACTGG | 1 cut(s) | 706 |
| Bse3DI | GCAATG | 1 cut(s) | 754 |
| BseBI | CCWGG | 2 cut(s) | 182, 691 |
| BseDI | CCNNGG | 3 cut(s) | 180, 271, 556 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 458, 562 |
| BseMI | GCAATG | 1 cut(s) | 754 |
| BseMII | CTCAG | 1 cut(s) | 575 |
| BseNI | ACTGG | 1 cut(s) | 706 |
| BseRI | GAGGAG | 2 cut(s) | 17, 193 |
| BseSI | GKGCMC | 1 cut(s) | 364 |
| BseXI | GCAGC | 4 cut(s) | 101, 357, 365, 490 |
| BsgI | GTGCAG | 2 cut(s) | 100, 336 |
| Bsh1236I | CGCG | 1 cut(s) | 134 |
| BshFI | GGCC | 5 cut(s) | 258, 451, 526, 566, 677 |
| BshNI | GGYRCC | 2 cut(s) | 359, 650 |
| BsiHKAI | GWGCWC | 2 cut(s) | 438, 712 |
| BsiSI | CCGG | 4 cut(s) | 354, 484, 519, 546 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 458, 562 |
| BsmI | GAATGC | 1 cut(s) | 647 |
| BsnI | GGCC | 5 cut(s) | 258, 451, 526, 566, 677 |
| Bsp1286I | GDGCHC | 3 cut(s) | 364, 438, 712 |
| Bsp143I | GATC | 2 cut(s) | 230, 580 |
| BspACI | CCGC | 6 cut(s) | 79, 357, 447, 645, 648, 705 |
| BspANI | GGCC | 5 cut(s) | 258, 451, 526, 566, 677 |
| BspCNI | CTCAG | 1 cut(s) | 576 |
| BspFNI | CGCG | 1 cut(s) | 134 |
| BspHI | TCATGA | 1 cut(s) | 733 |
| BspLI | GGNNCC | 5 cut(s) | 232, 361, 517, 544, 652 |
| BspMAI | CTGCAG | 1 cut(s) | 375 |
| BspMI | ACCTGC | 1 cut(s) | 311 |
| BspPI | GGATC | 3 cut(s) | 225, 238, 588 |
| BspQI | GCTCTTC | 1 cut(s) | 88 |
| BspT107I | GGYRCC | 2 cut(s) | 359, 650 |
| BsrBI | CCGCTC | 1 cut(s) | 81 |
| BsrDI | GCAATG | 1 cut(s) | 754 |
| BsrI | ACTGG | 1 cut(s) | 706 |
| BssECI | CCNNGG | 3 cut(s) | 180, 271, 556 |
| BssMI | GATC | 2 cut(s) | 230, 580 |
| BssNI | GRCGYC | 1 cut(s) | 246 |
| BssT1I | CCWWGG | 1 cut(s) | 556 |
| Bst2UI | CCWGG | 2 cut(s) | 182, 691 |
| Bst4CI | ACNGT | 5 cut(s) | 223, 430, 595, 608, 662 |
| Bst6I | CTCTTC | 1 cut(s) | 88 |
| BstACI | GRCGYC | 1 cut(s) | 246 |
| BstC8I | GCNNGC | 1 cut(s) | 449 |
| BstDEI | CTNAG | 1 cut(s) | 584 |
| BstDSI | CCRYGG | 1 cut(s) | 271 |
| BstFNI | CGCG | 1 cut(s) | 134 |
| BstHHI | GCGC | 2 cut(s) | 136, 299 |
| BstKTI | GATC | 2 cut(s) | 233, 583 |
| BstMBI | GATC | 2 cut(s) | 230, 580 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 142, 303, 797 |
| BstNI | CCWGG | 2 cut(s) | 182, 691 |
| BstSCI | CCNGG | 3 cut(s) | 180, 545, 689 |
| BstSFI | CTRYAG | 1 cut(s) | 371 |
| BstSLI | GKGCMC | 1 cut(s) | 364 |
| BstUI | CGCG | 1 cut(s) | 134 |
| BstV1I | GCAGC | 4 cut(s) | 101, 357, 365, 490 |
| BstV2I | GAAGAC | 1 cut(s) | 767 |
| BstX2I | RGATCY | 2 cut(s) | 230, 580 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 272 |
| BstYI | RGATCY | 2 cut(s) | 230, 580 |
| BsuRI | GGCC | 5 cut(s) | 258, 451, 526, 566, 677 |
| BtgI | CCRYGG | 1 cut(s) | 271 |
| BtsIMutI | CAGTG | 2 cut(s) | 501, 600 |
| BveI | ACCTGC | 1 cut(s) | 311 |
| Cac8I | GCNNGC | 1 cut(s) | 449 |
| CciI | TCATGA | 1 cut(s) | 733 |
| CfoI | GCGC | 2 cut(s) | 136, 299 |
| Cfr13I | GGNCC | 4 cut(s) | 449, 524, 543, 565 |
| CseI | GACGC | 2 cut(s) | 295, 562 |
| Csp6I | GTAC | 5 cut(s) | 130, 391, 463, 529, 694 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 391, 426 |
| CviAII | CATG | 3 cut(s) | 226, 286, 734 |
| CviQI | GTAC | 5 cut(s) | 130, 391, 463, 529, 694 |
| DdeI | CTNAG | 1 cut(s) | 584 |
| DpnI | GATC | 2 cut(s) | 232, 582 |
| DpnII | GATC | 2 cut(s) | 230, 580 |
| DraIII | CACNNNGTG | 1 cut(s) | 597 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 101 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 101 |
| EaeI | YGGCCR | 1 cut(s) | 675 |
| Eam1104I | CTCTTC | 1 cut(s) | 88 |
| EarI | CTCTTC | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 1 cut(s) | 556 |
| Eco47I | GGWCC | 1 cut(s) | 543 |
| Eco57I | CTGAAG | 1 cut(s) | 350 |
| EcoRII | CCWGG | 2 cut(s) | 180, 689 |
| EcoT14I | CCWWGG | 1 cut(s) | 556 |
| EcoT22I | ATGCAT | 1 cut(s) | 732 |
| ErhI | CCWWGG | 1 cut(s) | 556 |
| FaeI | CATG | 3 cut(s) | 229, 289, 737 |
| FaiI | YATR | 5 cut(s) | 47, 227, 287, 668, 735 |
| FatI | CATG | 3 cut(s) | 225, 285, 733 |
| FauI | CCCGC | 2 cut(s) | 86, 440 |
| FblI | GTMKAC | 1 cut(s) | 105 |
| Fnu4HI | GCNGC | 5 cut(s) | 115, 371, 379, 504, 646 |
| Fsp4HI | GCNGC | 5 cut(s) | 115, 371, 379, 504, 646 |
| FspBI | CTAG | 1 cut(s) | 744 |
| GlaI | GCGC | 2 cut(s) | 135, 298 |
| GluI | GCNGC | 5 cut(s) | 115, 371, 379, 504, 646 |
| HaeIII | GGCC | 5 cut(s) | 258, 451, 526, 566, 677 |
| HapII | CCGG | 4 cut(s) | 354, 484, 519, 546 |
| HgaI | GACGC | 2 cut(s) | 295, 562 |
| HhaI | GCGC | 2 cut(s) | 136, 299 |
| Hin1I | GRCGYC | 1 cut(s) | 246 |
| Hin1II | CATG | 3 cut(s) | 229, 289, 737 |
| Hin6I | GCGC | 2 cut(s) | 134, 297 |
| HinP1I | GCGC | 2 cut(s) | 134, 297 |
| HinfI | GANTC | 3 cut(s) | 152, 467, 491 |
| HpaII | CCGG | 4 cut(s) | 354, 484, 519, 546 |
| HphI | GGTGA | 2 cut(s) | 643, 674 |
| Hpy166II | GTNNAC | 2 cut(s) | 106, 658 |
| Hpy188I | TCNGA | 3 cut(s) | 472, 585, 626 |
| Hpy188III | TCNNGA | 3 cut(s) | 331, 602, 734 |
| Hpy8I | GTNNAC | 2 cut(s) | 106, 658 |
| Hpy99I | CGWCG | 3 cut(s) | 311, 457, 578 |
| HpyAV | CCTTC | 4 cut(s) | 84, 109, 374, 826 |
| HpyCH4III | ACNGT | 5 cut(s) | 223, 430, 595, 608, 662 |
| HpyCH4IV | ACGT | 2 cut(s) | 246, 552 |
| HpyCH4V | TGCA | 5 cut(s) | 117, 317, 373, 730, 770 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 142, 303, 797 |
| HpyF3I | CTNAG | 1 cut(s) | 584 |
| HpySE526I | ACGT | 2 cut(s) | 246, 552 |
| Hsp92I | GRCGYC | 1 cut(s) | 246 |
| Hsp92II | CATG | 3 cut(s) | 229, 289, 737 |
| HspAI | GCGC | 2 cut(s) | 134, 297 |
| Kzo9I | GATC | 2 cut(s) | 230, 580 |
| LguI | GCTCTTC | 1 cut(s) | 88 |
| LmnI | GCTCC | 3 cut(s) | 174, 333, 521 |
| Lsp1109I | GCAGC | 4 cut(s) | 101, 357, 365, 490 |
| LweI | GCATC | 2 cut(s) | 717, 739 |
| MaeI | CTAG | 1 cut(s) | 744 |
| MaeII | ACGT | 2 cut(s) | 246, 552 |
| MaeIII | GTNAC | 1 cut(s) | 683 |
| MalI | GATC | 2 cut(s) | 232, 582 |
| MbiI | CCGCTC | 1 cut(s) | 81 |
| MboI | GATC | 2 cut(s) | 230, 580 |
| MboII | GAAGA | 2 cut(s) | 75, 772 |
| MflI | RGATCY | 2 cut(s) | 230, 580 |
| MhlI | GDGCHC | 3 cut(s) | 364, 438, 712 |
| MlsI | TGGCCA | 1 cut(s) | 677 |
| MluCI | AATT | 2 cut(s) | 187, 771 |
| MluNI | TGGCCA | 1 cut(s) | 677 |
| MlyI | GAGTC | 1 cut(s) | 161 |
| MmeI | TCCRAC | 1 cut(s) | 180 |
| Mox20I | TGGCCA | 1 cut(s) | 677 |
| Mph1103I | ATGCAT | 1 cut(s) | 732 |
| MscI | TGGCCA | 1 cut(s) | 677 |
| MseI | TTAA | 1 cut(s) | 186 |
| MslI | CAYNNNNRTG | 1 cut(s) | 224 |
| Msp20I | TGGCCA | 1 cut(s) | 677 |
| MspA1I | CMGCKG | 1 cut(s) | 370 |
| MspI | CCGG | 4 cut(s) | 354, 484, 519, 546 |
| MspR9I | CCNGG | 3 cut(s) | 182, 547, 691 |
| Mva1269I | GAATGC | 1 cut(s) | 647 |
| MvaI | CCWGG | 2 cut(s) | 182, 691 |
| MvnI | CGCG | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 142, 303, 797 |
| NciI | CCSGG | 1 cut(s) | 547 |
| NdeII | GATC | 2 cut(s) | 230, 580 |
| NlaIII | CATG | 3 cut(s) | 229, 289, 737 |
| NlaIV | GGNNCC | 5 cut(s) | 232, 361, 517, 544, 652 |
| NsiI | ATGCAT | 1 cut(s) | 732 |
| PagI | TCATGA | 1 cut(s) | 733 |
| PaqCI | CACCTGC | 1 cut(s) | 311 |
| PciSI | GCTCTTC | 1 cut(s) | 88 |
| PctI | GAATGC | 1 cut(s) | 647 |
| PfeI | GAWTC | 2 cut(s) | 467, 491 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 562 |
| PfoI | TCCNGGA | 1 cut(s) | 545 |
| PkrI | GCNGC | 5 cut(s) | 116, 372, 380, 505, 647 |
| PleI | GAGTC | 1 cut(s) | 160 |
| PpsI | GAGTC | 1 cut(s) | 160 |
| Psp6I | CCWGG | 2 cut(s) | 180, 689 |
| PspGI | CCWGG | 2 cut(s) | 180, 689 |
| PspN4I | GGNNCC | 5 cut(s) | 232, 361, 517, 544, 652 |
| PspPI | GGNCC | 4 cut(s) | 449, 524, 543, 565 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 131, 163 |
| PstI | CTGCAG | 1 cut(s) | 375 |
| PsuI | RGATCY | 2 cut(s) | 230, 580 |
| PvuII | CAGCTG | 1 cut(s) | 370 |
| RsaI | GTAC | 5 cut(s) | 131, 392, 464, 530, 695 |
| RsaNI | GTAC | 5 cut(s) | 130, 391, 463, 529, 694 |
| RseI | CAYNNNNRTG | 1 cut(s) | 224 |
| SapI | GCTCTTC | 1 cut(s) | 88 |
| SaqAI | TTAA | 1 cut(s) | 186 |
| SatI | GCNGC | 5 cut(s) | 115, 371, 379, 504, 646 |
| Sau3AI | GATC | 2 cut(s) | 230, 580 |
| Sau96I | GGNCC | 4 cut(s) | 449, 524, 543, 565 |
| SchI | GAGTC | 1 cut(s) | 161 |
| ScrFI | CCNGG | 3 cut(s) | 182, 547, 691 |
| SduI | GDGCHC | 3 cut(s) | 364, 438, 712 |
| SfaNI | GCATC | 2 cut(s) | 717, 739 |
| SfcI | CTRYAG | 1 cut(s) | 371 |
| SinI | GGWCC | 1 cut(s) | 543 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 224 |
| Sse9I | AATT | 2 cut(s) | 187, 771 |
| SsiI | CCGC | 6 cut(s) | 79, 357, 447, 645, 648, 705 |
| SspMI | CTAG | 1 cut(s) | 744 |
| StyD4I | CCNGG | 3 cut(s) | 180, 545, 689 |
| StyI | CCWWGG | 1 cut(s) | 556 |
| TaaI | ACNGT | 5 cut(s) | 223, 430, 595, 608, 662 |
| TaiI | ACGT | 2 cut(s) | 249, 555 |
| TasI | AATT | 2 cut(s) | 187, 771 |
| TauI | GCSGC | 1 cut(s) | 648 |
| TfiI | GAWTC | 2 cut(s) | 467, 491 |
| Tru1I | TTAA | 1 cut(s) | 186 |
| Tru9I | TTAA | 1 cut(s) | 186 |
| TscAI | CASTG | 2 cut(s) | 501, 600 |
| TseI | GCWGC | 4 cut(s) | 114, 370, 378, 503 |
| TspDTI | ATGAA | 1 cut(s) | 34 |
| TspGWI | ACGGA | 2 cut(s) | 123, 489 |
| TspRI | CASTG | 2 cut(s) | 501, 600 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 562 |
| VpaK11BI | GGWCC | 1 cut(s) | 543 |
| XmiI | GTMKAC | 1 cut(s) | 105 |
| XspI | CTAG | 1 cut(s) | 744 |
| ZraI | GACGTC | 1 cut(s) | 247 |
| Zsp2I | ATGCAT | 1 cut(s) | 732 |