DNA repair
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 708, 723 |
| AccII | CGCG | 1 cut(s) | 386 |
| AciI | CCGC | 1 cut(s) | 560 |
| AclWI | GGATC | 5 cut(s) | 338, 351, 424, 529, 635 |
| AcsI | RAATTY | 2 cut(s) | 219, 407 |
| AcuI | CTGAAG | 4 cut(s) | 16, 58, 1078, 1095 |
| AfaI | GTAC | 2 cut(s) | 357, 549 |
| AflIII | ACRYGT | 1 cut(s) | 384 |
| AgsI | TTSAA | 8 cut(s) | 258, 293, 487, 568, 731, 950, 956, 1012 |
| AjnI | CCWGG | 1 cut(s) | 744 |
| AluBI | AGCT | 6 cut(s) | 72, 277, 506, 622, 839, 1075 |
| AluI | AGCT | 6 cut(s) | 72, 277, 506, 622, 839, 1075 |
| Alw21I | GWGCWC | 2 cut(s) | 279, 451 |
| Alw26I | GTCTC | 1 cut(s) | 22 |
| AlwI | GGATC | 5 cut(s) | 338, 351, 424, 529, 635 |
| AoxI | GGCC | 1 cut(s) | 781 |
| ApeKI | GCWGC | 1 cut(s) | 461 |
| ApoI | RAATTY | 2 cut(s) | 219, 407 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1091 |
| AspS9I | GGNCC | 1 cut(s) | 1042 |
| AsuHPI | GGTGA | 4 cut(s) | 133, 392, 625, 977 |
| AsuII | TTCGAA | 1 cut(s) | 411 |
| AvaII | GGWCC | 1 cut(s) | 1042 |
| BamHI | GGATCC | 1 cut(s) | 343 |
| BanII | GRGCYC | 1 cut(s) | 279 |
| BbsI | GAAGAC | 1 cut(s) | 420 |
| Bbv12I | GWGCWC | 2 cut(s) | 279, 451 |
| BbvI | GCAGC | 1 cut(s) | 473 |
| BccI | CCATC | 2 cut(s) | 255, 623 |
| BciT130I | CCWGG | 1 cut(s) | 746 |
| BciVI | GTATCC | 2 cut(s) | 79, 296 |
| BclI | TGATCA | 2 cut(s) | 154, 981 |
| BcoDI | GTCTC | 1 cut(s) | 22 |
| BfmI | CTRYAG | 1 cut(s) | 1139 |
| BfuI | GTATCC | 2 cut(s) | 79, 296 |
| BisI | GCNGC | 1 cut(s) | 462 |
| BlsI | GCNGC | 1 cut(s) | 463 |
| Bme1390I | CCNGG | 1 cut(s) | 746 |
| Bme18I | GGWCC | 1 cut(s) | 1042 |
| BmgT120I | GGNCC | 1 cut(s) | 1042 |
| BmiI | GGNNCC | 1 cut(s) | 345 |
| BmrFI | CCNGG | 1 cut(s) | 746 |
| BmsI | GCATC | 3 cut(s) | 260, 448, 677 |
| BpiI | GAAGAC | 1 cut(s) | 420 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 433, 465 |
| BpmI | CTGGAG | 1 cut(s) | 947 |
| Bpu14I | TTCGAA | 1 cut(s) | 411 |
| BpuEI | CTTGAG | 2 cut(s) | 383, 1091 |
| BsaBI | GATNNNNATC | 1 cut(s) | 539 |
| Bse1I | ACTGG | 1 cut(s) | 930 |
| Bse8I | GATNNNNATC | 1 cut(s) | 539 |
| BseBI | CCWGG | 1 cut(s) | 746 |
| BseGI | GGATG | 2 cut(s) | 861, 925 |
| BseJI | GATNNNNATC | 1 cut(s) | 539 |
| BseMII | CTCAG | 1 cut(s) | 200 |
| BseNI | ACTGG | 1 cut(s) | 930 |
| BseRI | GAGGAG | 2 cut(s) | 93, 186 |
| BseXI | GCAGC | 1 cut(s) | 473 |
| Bsh1236I | CGCG | 1 cut(s) | 386 |
| BshFI | GGCC | 1 cut(s) | 783 |
| BsiHKAI | GWGCWC | 2 cut(s) | 279, 451 |
| BslFI | GGGAC | 1 cut(s) | 334 |
| BsmAI | GTCTC | 1 cut(s) | 22 |
| BsmFI | GGGAC | 1 cut(s) | 334 |
| BsmI | GAATGC | 1 cut(s) | 1093 |
| BsnI | GGCC | 1 cut(s) | 783 |
| Bsp119I | TTCGAA | 1 cut(s) | 411 |
| Bsp1286I | GDGCHC | 2 cut(s) | 279, 451 |
| Bsp143I | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| BspACI | CCGC | 1 cut(s) | 560 |
| BspANI | GGCC | 1 cut(s) | 783 |
| BspCNI | CTCAG | 1 cut(s) | 199 |
| BspFNI | CGCG | 1 cut(s) | 386 |
| BspLI | GGNNCC | 1 cut(s) | 345 |
| BspPI | GGATC | 5 cut(s) | 338, 351, 424, 529, 635 |
| BspQI | GCTCTTC | 2 cut(s) | 198, 267 |
| BspT104I | TTCGAA | 1 cut(s) | 411 |
| BsrI | ACTGG | 1 cut(s) | 930 |
| BssMI | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| Bst2UI | CCWGG | 1 cut(s) | 746 |
| Bst4CI | ACNGT | 2 cut(s) | 703, 879 |
| Bst6I | CTCTTC | 4 cut(s) | 25, 198, 267, 810 |
| BstBI | TTCGAA | 1 cut(s) | 411 |
| BstC8I | GCNNGC | 1 cut(s) | 560 |
| BstDEI | CTNAG | 2 cut(s) | 186, 809 |
| BstF5I | GGATG | 2 cut(s) | 861, 925 |
| BstFNI | CGCG | 1 cut(s) | 386 |
| BstKTI | GATC | 8 cut(s) | 109, 157, 346, 432, 525, 537, 643, 984 |
| BstMAI | GTCTC | 1 cut(s) | 22 |
| BstMBI | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| BstNI | CCWGG | 1 cut(s) | 746 |
| BstSCI | CCNGG | 1 cut(s) | 744 |
| BstSFI | CTRYAG | 1 cut(s) | 1139 |
| BstUI | CGCG | 1 cut(s) | 386 |
| BstV1I | GCAGC | 1 cut(s) | 473 |
| BstV2I | GAAGAC | 1 cut(s) | 420 |
| BstX2I | RGATCY | 3 cut(s) | 343, 429, 534 |
| BstYI | RGATCY | 3 cut(s) | 343, 429, 534 |
| BsuI | GTATCC | 2 cut(s) | 79, 296 |
| BsuRI | GGCC | 1 cut(s) | 783 |
| BtsCI | GGATG | 2 cut(s) | 861, 925 |
| Cac8I | GCNNGC | 1 cut(s) | 560 |
| Cfr13I | GGNCC | 1 cut(s) | 1042 |
| CseI | GACGC | 1 cut(s) | 392 |
| Csp6I | GTAC | 2 cut(s) | 356, 548 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 133, 168 |
| CviAII | CATG | 2 cut(s) | 353, 438 |
| CviQI | GTAC | 2 cut(s) | 356, 548 |
| DdeI | CTNAG | 2 cut(s) | 186, 809 |
| DpnI | GATC | 8 cut(s) | 108, 156, 345, 431, 524, 536, 642, 983 |
| DpnII | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| DraI | TTTAAA | 1 cut(s) | 936 |
| Eam1104I | CTCTTC | 4 cut(s) | 25, 198, 267, 810 |
| EarI | CTCTTC | 4 cut(s) | 25, 198, 267, 810 |
| Ecl136II | GAGCTC | 1 cut(s) | 277 |
| Eco147I | AGGCCT | 1 cut(s) | 783 |
| Eco24I | GRGCYC | 1 cut(s) | 279 |
| Eco47I | GGWCC | 1 cut(s) | 1042 |
| Eco53kI | GAGCTC | 1 cut(s) | 277 |
| Eco57I | CTGAAG | 4 cut(s) | 16, 58, 1078, 1095 |
| EcoICRI | GAGCTC | 1 cut(s) | 277 |
| EcoRII | CCWGG | 1 cut(s) | 744 |
| EcoT22I | ATGCAT | 1 cut(s) | 253 |
| EcoT38I | GRGCYC | 1 cut(s) | 279 |
| FaeI | CATG | 2 cut(s) | 356, 441 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 884, 916 |
| FaqI | GGGAC | 1 cut(s) | 334 |
| FatI | CATG | 2 cut(s) | 352, 437 |
| FauI | CCCGC | 1 cut(s) | 567 |
| FbaI | TGATCA | 2 cut(s) | 154, 981 |
| Fnu4HI | GCNGC | 1 cut(s) | 462 |
| FokI | GGATG | 2 cut(s) | 848, 932 |
| FriOI | GRGCYC | 1 cut(s) | 279 |
| Fsp4HI | GCNGC | 1 cut(s) | 462 |
| GluI | GCNGC | 1 cut(s) | 462 |
| GsuI | CTGGAG | 1 cut(s) | 947 |
| HaeIII | GGCC | 1 cut(s) | 783 |
| HgaI | GACGC | 1 cut(s) | 392 |
| Hin1II | CATG | 2 cut(s) | 356, 441 |
| HinfI | GANTC | 6 cut(s) | 138, 212, 596, 675, 895, 1128 |
| HphI | GGTGA | 4 cut(s) | 133, 392, 625, 977 |
| Hpy166II | GTNNAC | 3 cut(s) | 390, 529, 548 |
| Hpy188I | TCNGA | 5 cut(s) | 77, 522, 829, 1097, 1114 |
| Hpy188III | TCNNGA | 9 cut(s) | 197, 216, 258, 474, 526, 672, 758, 908, 1070 |
| Hpy8I | GTNNAC | 3 cut(s) | 390, 529, 548 |
| HpyAV | CCTTC | 6 cut(s) | 40, 54, 725, 773, 1102, 1119 |
| HpyCH4III | ACNGT | 2 cut(s) | 703, 879 |
| HpyCH4IV | ACGT | 3 cut(s) | 146, 283, 1023 |
| HpyCH4V | TGCA | 6 cut(s) | 251, 405, 461, 695, 713, 772 |
| HpyF3I | CTNAG | 2 cut(s) | 186, 809 |
| HpySE526I | ACGT | 3 cut(s) | 146, 283, 1023 |
| Hsp92II | CATG | 2 cut(s) | 356, 441 |
| Ksp22I | TGATCA | 2 cut(s) | 154, 981 |
| Kzo9I | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| LguI | GCTCTTC | 2 cut(s) | 198, 267 |
| LmnI | GCTCC | 1 cut(s) | 928 |
| LpnPI | CCDG | 6 cut(s) | 173, 459, 657, 731, 758, 911 |
| Lsp1109I | GCAGC | 1 cut(s) | 473 |
| LweI | GCATC | 3 cut(s) | 260, 448, 677 |
| MaeII | ACGT | 3 cut(s) | 146, 283, 1023 |
| MaeIII | GTNAC | 1 cut(s) | 380 |
| MalI | GATC | 8 cut(s) | 108, 156, 345, 431, 524, 536, 642, 983 |
| MboI | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| MboII | GAAGA | 9 cut(s) | 12, 185, 188, 246, 284, 425, 439, 797, 904 |
| MfeI | CAATTG | 2 cut(s) | 204, 714 |
| MflI | RGATCY | 3 cut(s) | 343, 429, 534 |
| MhlI | GDGCHC | 2 cut(s) | 279, 451 |
| MluCI | AATT | 8 cut(s) | 97, 204, 219, 327, 407, 466, 714, 903 |
| MluI | ACGCGT | 1 cut(s) | 384 |
| MlyI | GAGTC | 3 cut(s) | 221, 605, 1122 |
| MmeI | TCCRAC | 4 cut(s) | 105, 568, 814, 1064 |
| Mph1103I | ATGCAT | 1 cut(s) | 253 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1091 |
| MseI | TTAA | 5 cut(s) | 165, 902, 935, 1052, 1079 |
| MslI | CAYNNNNRTG | 1 cut(s) | 567 |
| MspR9I | CCNGG | 1 cut(s) | 746 |
| MunI | CAATTG | 2 cut(s) | 204, 714 |
| Mva1269I | GAATGC | 1 cut(s) | 1093 |
| MvaI | CCWGG | 1 cut(s) | 746 |
| MvnI | CGCG | 1 cut(s) | 386 |
| NdeII | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| NlaIII | CATG | 2 cut(s) | 356, 441 |
| NlaIV | GGNNCC | 1 cut(s) | 345 |
| NmuCI | GTSAC | 1 cut(s) | 380 |
| NsiI | ATGCAT | 1 cut(s) | 253 |
| NspV | TTCGAA | 1 cut(s) | 411 |
| PceI | AGGCCT | 1 cut(s) | 783 |
| PciSI | GCTCTTC | 2 cut(s) | 198, 267 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 221, 522 |
| PctI | GAATGC | 1 cut(s) | 1093 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1091 |
| PfeI | GAWTC | 3 cut(s) | 138, 675, 895 |
| PkrI | GCNGC | 1 cut(s) | 463 |
| PleI | GAGTC | 3 cut(s) | 220, 604, 1122 |
| PpsI | GAGTC | 3 cut(s) | 220, 604, 1122 |
| PsiI | TTATAA | 2 cut(s) | 708, 723 |
| Psp124BI | GAGCTC | 1 cut(s) | 279 |
| Psp6I | CCWGG | 1 cut(s) | 744 |
| PspGI | CCWGG | 1 cut(s) | 744 |
| PspN4I | GGNNCC | 1 cut(s) | 345 |
| PspPI | GGNCC | 1 cut(s) | 1042 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 85, 117 |
| PsuI | RGATCY | 3 cut(s) | 343, 429, 534 |
| RsaI | GTAC | 2 cut(s) | 357, 549 |
| RsaNI | GTAC | 2 cut(s) | 356, 548 |
| RseI | CAYNNNNRTG | 1 cut(s) | 567 |
| SacI | GAGCTC | 1 cut(s) | 279 |
| SapI | GCTCTTC | 2 cut(s) | 198, 267 |
| SaqAI | TTAA | 5 cut(s) | 165, 902, 935, 1052, 1079 |
| SatI | GCNGC | 1 cut(s) | 462 |
| Sau3AI | GATC | 8 cut(s) | 106, 154, 343, 429, 522, 534, 640, 981 |
| Sau96I | GGNCC | 1 cut(s) | 1042 |
| SchI | GAGTC | 3 cut(s) | 221, 605, 1122 |
| ScrFI | CCNGG | 1 cut(s) | 746 |
| SduI | GDGCHC | 2 cut(s) | 279, 451 |
| SfaNI | GCATC | 3 cut(s) | 260, 448, 677 |
| SfcI | CTRYAG | 1 cut(s) | 1139 |
| SfuI | TTCGAA | 1 cut(s) | 411 |
| SinI | GGWCC | 1 cut(s) | 1042 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 567 |
| SmlI | CTYRAG | 2 cut(s) | 398, 1070 |
| SmoI | CTYRAG | 2 cut(s) | 398, 1070 |
| Sse9I | AATT | 8 cut(s) | 97, 204, 219, 327, 407, 466, 714, 903 |
| SseBI | AGGCCT | 1 cut(s) | 783 |
| SsiI | CCGC | 1 cut(s) | 560 |
| SstI | GAGCTC | 1 cut(s) | 279 |
| StuI | AGGCCT | 1 cut(s) | 783 |
| StyD4I | CCNGG | 1 cut(s) | 744 |
| TaaI | ACNGT | 2 cut(s) | 703, 879 |
| TaiI | ACGT | 3 cut(s) | 149, 286, 1026 |
| TaqI | TCGA | 6 cut(s) | 198, 215, 224, 279, 411, 757 |
| TaqII | GACCGA | 1 cut(s) | 506 |
| TasI | AATT | 8 cut(s) | 97, 204, 219, 327, 407, 466, 714, 903 |
| TatI | WGTACW | 1 cut(s) | 547 |
| TfiI | GAWTC | 3 cut(s) | 138, 675, 895 |
| Tru1I | TTAA | 5 cut(s) | 165, 902, 935, 1052, 1079 |
| Tru9I | TTAA | 5 cut(s) | 165, 902, 935, 1052, 1079 |
| TseFI | GTSAC | 1 cut(s) | 380 |
| TseI | GCWGC | 1 cut(s) | 461 |
| Tsp45I | GTSAC | 1 cut(s) | 380 |
| TspDTI | ATGAA | 5 cut(s) | 17, 139, 323, 516, 936 |
| TspGWI | ACGGA | 3 cut(s) | 336, 533, 633 |
| VpaK11BI | GGWCC | 1 cut(s) | 1042 |
| XapI | RAATTY | 2 cut(s) | 219, 407 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1091 |
| Zsp2I | ATGCAT | 1 cut(s) | 253 |