TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PBP | PF01161 | 60 - 146 | 9.1e-12 | Phosphatidylethanolamine-binding protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 411 |
| AciI | CCGC | 2 cut(s) | 473, 510 |
| AclWI | GGATC | 4 cut(s) | 183, 203, 216, 466 |
| AcoI | YGGCCR | 2 cut(s) | 301, 332 |
| AcyI | GRCGYC | 1 cut(s) | 412 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 28, 66, 341, 379, 513 |
| AjnI | CCWGG | 1 cut(s) | 403 |
| AluBI | AGCT | 2 cut(s) | 124, 445 |
| AluI | AGCT | 2 cut(s) | 124, 445 |
| Alw21I | GWGCWC | 2 cut(s) | 126, 447 |
| Alw26I | GTCTC | 1 cut(s) | 426 |
| AlwI | GGATC | 4 cut(s) | 183, 203, 216, 466 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 470 |
| Ama87I | CYCGRG | 1 cut(s) | 153 |
| AoxI | GGCC | 2 cut(s) | 301, 332 |
| ApeKI | GCWGC | 1 cut(s) | 470 |
| AspLEI | GCGC | 1 cut(s) | 414 |
| AspS9I | GGNCC | 3 cut(s) | 16, 55, 183 |
| AsuC2I | CCSGG | 1 cut(s) | 83 |
| AsuHPI | GGTGA | 3 cut(s) | 97, 136, 453 |
| AvaI | CYCGRG | 1 cut(s) | 153 |
| AvaII | GGWCC | 3 cut(s) | 16, 55, 183 |
| BamHI | GGATCC | 1 cut(s) | 208 |
| BanI | GGYRCC | 1 cut(s) | 411 |
| BanII | GRGCYC | 2 cut(s) | 126, 447 |
| Bbv12I | GWGCWC | 2 cut(s) | 126, 447 |
| BbvI | GCAGC | 1 cut(s) | 457 |
| BccI | CCATC | 1 cut(s) | 402 |
| BceAI | ACGGC | 1 cut(s) | 347 |
| BciT130I | CCWGG | 1 cut(s) | 405 |
| BcnI | CCSGG | 1 cut(s) | 83 |
| BcoDI | GTCTC | 1 cut(s) | 426 |
| BfaI | CTAG | 1 cut(s) | 99 |
| BfoI | RGCGCY | 1 cut(s) | 415 |
| BisI | GCNGC | 1 cut(s) | 471 |
| BlsI | GCNGC | 1 cut(s) | 472 |
| Bme1390I | CCNGG | 2 cut(s) | 83, 405 |
| Bme18I | GGWCC | 3 cut(s) | 16, 55, 183 |
| BmeT110I | CYCGRG | 1 cut(s) | 153 |
| BmgT120I | GGNCC | 3 cut(s) | 16, 55, 183 |
| BmiI | GGNNCC | 6 cut(s) | 17, 18, 57, 210, 413, 505 |
| BmrFI | CCNGG | 2 cut(s) | 83, 405 |
| BmrI | ACTGGG | 2 cut(s) | 222, 297 |
| BmsI | GCATC | 1 cut(s) | 205 |
| BmuI | ACTGGG | 2 cut(s) | 222, 297 |
| BpmI | CTGGAG | 1 cut(s) | 387 |
| BpuMI | CCSGG | 1 cut(s) | 83 |
| BsaHI | GRCGYC | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 2 cut(s) | 5, 329 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 28, 66, 341, 379, 513 |
| Bse1I | ACTGG | 3 cut(s) | 228, 292, 464 |
| BseBI | CCWGG | 1 cut(s) | 405 |
| BseDI | CCNNGG | 2 cut(s) | 5, 329 |
| BseGI | GGATG | 2 cut(s) | 52, 413 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 28, 66, 341, 379, 513 |
| BseNI | ACTGG | 3 cut(s) | 228, 292, 464 |
| BseXI | GCAGC | 1 cut(s) | 457 |
| BseYI | CCCAGC | 1 cut(s) | 221 |
| BshFI | GGCC | 2 cut(s) | 303, 334 |
| BshNI | GGYRCC | 1 cut(s) | 411 |
| BsiHKAI | GWGCWC | 2 cut(s) | 126, 447 |
| BsiHKCI | CYCGRG | 1 cut(s) | 153 |
| BsiSI | CCGG | 3 cut(s) | 82, 373, 507 |
| BslFI | GGGAC | 2 cut(s) | 23, 29 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 28, 66, 341, 379, 513 |
| BsmAI | GTCTC | 1 cut(s) | 426 |
| BsmFI | GGGAC | 2 cut(s) | 23, 29 |
| BsnI | GGCC | 2 cut(s) | 303, 334 |
| BsoBI | CYCGRG | 1 cut(s) | 153 |
| Bsp1286I | GDGCHC | 2 cut(s) | 126, 447 |
| Bsp143I | GATC | 3 cut(s) | 175, 208, 458 |
| BspACI | CCGC | 2 cut(s) | 473, 510 |
| BspANI | GGCC | 2 cut(s) | 303, 334 |
| BspLI | GGNNCC | 6 cut(s) | 17, 18, 57, 210, 413, 505 |
| BspPI | GGATC | 4 cut(s) | 183, 203, 216, 466 |
| BspT107I | GGYRCC | 1 cut(s) | 411 |
| BsrI | ACTGG | 3 cut(s) | 228, 292, 464 |
| BssECI | CCNNGG | 2 cut(s) | 5, 329 |
| BssMI | GATC | 3 cut(s) | 175, 208, 458 |
| BssNI | GRCGYC | 1 cut(s) | 412 |
| BssT1I | CCWWGG | 1 cut(s) | 5 |
| Bst2UI | CCWGG | 1 cut(s) | 405 |
| Bst4CI | ACNGT | 2 cut(s) | 340, 394 |
| Bst6I | CTCTTC | 1 cut(s) | 28 |
| BstACI | GRCGYC | 1 cut(s) | 412 |
| BstDEI | CTNAG | 1 cut(s) | 179 |
| BstDSI | CCRYGG | 1 cut(s) | 329 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 64 |
| BstF5I | GGATG | 2 cut(s) | 52, 413 |
| BstH2I | RGCGCY | 1 cut(s) | 415 |
| BstHHI | GCGC | 1 cut(s) | 414 |
| BstKTI | GATC | 3 cut(s) | 178, 211, 461 |
| BstMAI | GTCTC | 1 cut(s) | 426 |
| BstMBI | GATC | 3 cut(s) | 175, 208, 458 |
| BstNI | CCWGG | 1 cut(s) | 405 |
| BstSCI | CCNGG | 2 cut(s) | 81, 403 |
| BstV1I | GCAGC | 1 cut(s) | 457 |
| BstX2I | RGATCY | 2 cut(s) | 175, 208 |
| BstYI | RGATCY | 2 cut(s) | 175, 208 |
| BsuRI | GGCC | 2 cut(s) | 303, 334 |
| BtgI | CCRYGG | 1 cut(s) | 329 |
| BtgZI | GCGATG | 1 cut(s) | 335 |
| BtsCI | GGATG | 2 cut(s) | 52, 413 |
| BtsIMutI | CAGTG | 4 cut(s) | 235, 267, 345, 471 |
| CaiI | CAGNNNCTG | 1 cut(s) | 470 |
| CfoI | GCGC | 1 cut(s) | 414 |
| Cfr13I | GGNCC | 3 cut(s) | 16, 55, 183 |
| CviAII | CATG | 1 cut(s) | 202 |
| CviJI | RGCY | 7 cut(s) | 124, 225, 303, 334, 445, 470, 504 |
| CviKI_1 | RGCY | 7 cut(s) | 124, 225, 303, 334, 445, 470, 504 |
| DdeI | CTNAG | 1 cut(s) | 179 |
| DinI | GGCGCC | 1 cut(s) | 413 |
| DpnI | GATC | 3 cut(s) | 177, 210, 460 |
| DpnII | GATC | 3 cut(s) | 175, 208, 458 |
| EaeI | YGGCCR | 2 cut(s) | 301, 332 |
| Eam1104I | CTCTTC | 1 cut(s) | 28 |
| EarI | CTCTTC | 1 cut(s) | 28 |
| EciI | GGCGGA | 1 cut(s) | 525 |
| Ecl136II | GAGCTC | 2 cut(s) | 124, 445 |
| Eco130I | CCWWGG | 1 cut(s) | 5 |
| Eco24I | GRGCYC | 2 cut(s) | 126, 447 |
| Eco47I | GGWCC | 3 cut(s) | 16, 55, 183 |
| Eco53kI | GAGCTC | 2 cut(s) | 124, 445 |
| Eco88I | CYCGRG | 1 cut(s) | 153 |
| EcoICRI | GAGCTC | 2 cut(s) | 124, 445 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 64 |
| EcoO109I | RGGNCCY | 2 cut(s) | 16, 183 |
| EcoRII | CCWGG | 1 cut(s) | 403 |
| EcoT14I | CCWWGG | 1 cut(s) | 5 |
| EcoT38I | GRGCYC | 2 cut(s) | 126, 447 |
| EgeI | GGCGCC | 1 cut(s) | 413 |
| EheI | GGCGCC | 1 cut(s) | 413 |
| ErhI | CCWWGG | 1 cut(s) | 5 |
| FaeI | CATG | 1 cut(s) | 205 |
| FaiI | YATR | 6 cut(s) | 41, 164, 192, 203, 321, 399 |
| FaqI | GGGAC | 2 cut(s) | 23, 29 |
| FatI | CATG | 1 cut(s) | 201 |
| Fnu4HI | GCNGC | 1 cut(s) | 471 |
| FokI | GGATG | 2 cut(s) | 59, 420 |
| FriOI | GRGCYC | 2 cut(s) | 126, 447 |
| Fsp4HI | GCNGC | 1 cut(s) | 471 |
| FspBI | CTAG | 1 cut(s) | 99 |
| GlaI | GCGC | 1 cut(s) | 413 |
| GluI | GCNGC | 1 cut(s) | 471 |
| GsaI | CCCAGC | 1 cut(s) | 225 |
| GsuI | CTGGAG | 1 cut(s) | 387 |
| HaeII | RGCGCY | 1 cut(s) | 415 |
| HaeIII | GGCC | 2 cut(s) | 303, 334 |
| HapII | CCGG | 3 cut(s) | 82, 373, 507 |
| HhaI | GCGC | 1 cut(s) | 414 |
| Hin1I | GRCGYC | 1 cut(s) | 412 |
| Hin1II | CATG | 1 cut(s) | 205 |
| Hin6I | GCGC | 1 cut(s) | 412 |
| HinP1I | GCGC | 1 cut(s) | 412 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HinfI | GANTC | 2 cut(s) | 36, 346 |
| HpaI | GTTAAC | 1 cut(s) | 109 |
| HpaII | CCGG | 3 cut(s) | 82, 373, 507 |
| HphI | GGTGA | 3 cut(s) | 97, 136, 453 |
| Hpy166II | GTNNAC | 3 cut(s) | 109, 329, 478 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| Hpy8I | GTNNAC | 3 cut(s) | 109, 329, 478 |
| HpyAV | CCTTC | 4 cut(s) | 141, 196, 378, 507 |
| HpyCH4III | ACNGT | 2 cut(s) | 340, 394 |
| HpyCH4V | TGCA | 3 cut(s) | 218, 256, 281 |
| HpyF3I | CTNAG | 1 cut(s) | 179 |
| Hsp92I | GRCGYC | 1 cut(s) | 412 |
| Hsp92II | CATG | 1 cut(s) | 205 |
| HspAI | GCGC | 1 cut(s) | 412 |
| KasI | GGCGCC | 1 cut(s) | 411 |
| KflI | GGGWCCC | 1 cut(s) | 16 |
| KspAI | GTTAAC | 1 cut(s) | 109 |
| Kzo9I | GATC | 3 cut(s) | 175, 208, 458 |
| LmnI | GCTCC | 2 cut(s) | 406, 509 |
| Lsp1109I | GCAGC | 1 cut(s) | 457 |
| LweI | GCATC | 1 cut(s) | 205 |
| MaeI | CTAG | 1 cut(s) | 99 |
| MaeIII | GTNAC | 4 cut(s) | 85, 142, 230, 265 |
| MalI | GATC | 3 cut(s) | 177, 210, 460 |
| MboI | GATC | 3 cut(s) | 175, 208, 458 |
| MboII | GAAGA | 1 cut(s) | 45 |
| MfeI | CAATTG | 1 cut(s) | 377 |
| MflI | RGATCY | 2 cut(s) | 175, 208 |
| MhlI | GDGCHC | 2 cut(s) | 126, 447 |
| MluCI | AATT | 1 cut(s) | 377 |
| Mly113I | GGCGCC | 1 cut(s) | 412 |
| MlyI | GAGTC | 1 cut(s) | 45 |
| MnlI | CCTC | 4 cut(s) | 97, 161, 162, 166 |
| MseI | TTAA | 3 cut(s) | 108, 423, 483 |
| MspI | CCGG | 3 cut(s) | 82, 373, 507 |
| MspR9I | CCNGG | 2 cut(s) | 83, 405 |
| MunI | CAATTG | 1 cut(s) | 377 |
| MvaI | CCWGG | 1 cut(s) | 405 |
| NarI | GGCGCC | 1 cut(s) | 412 |
| NciI | CCSGG | 1 cut(s) | 83 |
| NdeII | GATC | 3 cut(s) | 175, 208, 458 |
| NlaIII | CATG | 1 cut(s) | 205 |
| NlaIV | GGNNCC | 6 cut(s) | 17, 18, 57, 210, 413, 505 |
| NmeAIII | GCCGAG | 1 cut(s) | 466 |
| NmuCI | GTSAC | 4 cut(s) | 85, 142, 230, 265 |
| PaeR7I | CTCGAG | 1 cut(s) | 153 |
| PfeI | GAWTC | 1 cut(s) | 346 |
| PfoI | TCCNGGA | 1 cut(s) | 403 |
| PkrI | GCNGC | 1 cut(s) | 472 |
| PleI | GAGTC | 1 cut(s) | 44 |
| PluTI | GGCGCC | 1 cut(s) | 415 |
| PpsI | GAGTC | 1 cut(s) | 44 |
| PpuMI | RGGWCCY | 2 cut(s) | 16, 183 |
| Psp124BI | GAGCTC | 2 cut(s) | 126, 447 |
| Psp5II | RGGWCCY | 2 cut(s) | 16, 183 |
| Psp6I | CCWGG | 1 cut(s) | 403 |
| PspFI | CCCAGC | 1 cut(s) | 221 |
| PspGI | CCWGG | 1 cut(s) | 403 |
| PspN4I | GGNNCC | 6 cut(s) | 17, 18, 57, 210, 413, 505 |
| PspPI | GGNCC | 3 cut(s) | 16, 55, 183 |
| PspPPI | RGGWCCY | 2 cut(s) | 16, 183 |
| PspXI | VCTCGAGB | 1 cut(s) | 153 |
| PstNI | CAGNNNCTG | 1 cut(s) | 470 |
| PsuI | RGATCY | 2 cut(s) | 175, 208 |
| SacI | GAGCTC | 2 cut(s) | 126, 447 |
| SaqAI | TTAA | 3 cut(s) | 108, 423, 483 |
| SatI | GCNGC | 1 cut(s) | 471 |
| Sau3AI | GATC | 3 cut(s) | 175, 208, 458 |
| Sau96I | GGNCC | 3 cut(s) | 16, 55, 183 |
| SchI | GAGTC | 1 cut(s) | 45 |
| ScrFI | CCNGG | 2 cut(s) | 83, 405 |
| SduI | GDGCHC | 2 cut(s) | 126, 447 |
| SetI | ASST | 8 cut(s) | 71, 108, 126, 133, 154, 188, 243, 447 |
| SfaNI | GCATC | 1 cut(s) | 205 |
| SfoI | GGCGCC | 1 cut(s) | 413 |
| Sfr274I | CTCGAG | 1 cut(s) | 153 |
| SinI | GGWCC | 3 cut(s) | 16, 55, 183 |
| SlaI | CTCGAG | 1 cut(s) | 153 |
| SmlI | CTYRAG | 1 cut(s) | 153 |
| SmoI | CTYRAG | 1 cut(s) | 153 |
| Sse9I | AATT | 1 cut(s) | 377 |
| SsiI | CCGC | 2 cut(s) | 473, 510 |
| SspDI | GGCGCC | 1 cut(s) | 411 |
| SspI | AATATT | 1 cut(s) | 251 |
| SspMI | CTAG | 1 cut(s) | 99 |
| SstI | GAGCTC | 2 cut(s) | 126, 447 |
| StyD4I | CCNGG | 2 cut(s) | 81, 403 |
| StyI | CCWWGG | 1 cut(s) | 5 |
| TaaI | ACNGT | 2 cut(s) | 340, 394 |
| TaqI | TCGA | 1 cut(s) | 154 |
| TasI | AATT | 1 cut(s) | 377 |
| TfiI | GAWTC | 1 cut(s) | 346 |
| Tru1I | TTAA | 3 cut(s) | 108, 423, 483 |
| Tru9I | TTAA | 3 cut(s) | 108, 423, 483 |
| TscAI | CASTG | 4 cut(s) | 235, 274, 345, 471 |
| TseFI | GTSAC | 4 cut(s) | 85, 142, 230, 265 |
| TseI | GCWGC | 1 cut(s) | 470 |
| Tsp45I | GTSAC | 4 cut(s) | 85, 142, 230, 265 |
| TspDTI | ATGAA | 2 cut(s) | 336, 338 |
| TspRI | CASTG | 4 cut(s) | 235, 274, 345, 471 |
| VpaK11BI | GGWCC | 3 cut(s) | 16, 55, 183 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 64 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 497 |
| XhoI | CTCGAG | 1 cut(s) | 153 |
| XspI | CTAG | 1 cut(s) | 99 |