TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1035 |
| Acc65I | GGTACC | 1 cut(s) | 1160 |
| AccB1I | GGYRCC | 3 cut(s) | 275, 1160, 2454 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2917 |
| AccI | GTMKAC | 1 cut(s) | 3333 |
| AccII | CGCG | 1 cut(s) | 2165 |
| AciI | CCGC | 3 cut(s) | 2290, 2402, 3584 |
| AclI | AACGTT | 1 cut(s) | 1459 |
| AclWI | GGATC | 7 cut(s) | 124, 441, 1022, 3267, 3387, 3418, 3474 |
| AcoI | YGGCCR | 2 cut(s) | 90, 450 |
| AcsI | RAATTY | 8 cut(s) | 245, 762, 1483, 1740, 1827, 2842, 3123, 3145 |
| AcuI | CTGAAG | 2 cut(s) | 603, 1152 |
| AcyI | GRCGYC | 2 cut(s) | 2593, 2988 |
| AfaI | GTAC | 7 cut(s) | 98, 392, 864, 1162, 1862, 2880, 3011 |
| AfeI | AGCGCT | 1 cut(s) | 2491 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 623, 676, 2464, 2589, 2917, 2997, 3585 |
| AflII | CTTAAG | 1 cut(s) | 1249 |
| AflIII | ACRYGT | 6 cut(s) | 865, 1887, 2025, 2163, 3336, 3347 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2944 |
| AjiI | CACGTC | 2 cut(s) | 1888, 2026 |
| AjnI | CCWGG | 5 cut(s) | 5, 1030, 2563, 3094, 3447 |
| AleI | CACNNNNGTG | 1 cut(s) | 3086 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 147, 179, 3033, 3065 |
| Alw21I | GWGCWC | 2 cut(s) | 924, 1653 |
| Alw44I | GTGCAC | 1 cut(s) | 1649 |
| AlwI | GGATC | 7 cut(s) | 124, 441, 1022, 3267, 3387, 3418, 3474 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2627 |
| Ama87I | CYCGRG | 3 cut(s) | 1517, 1628, 3037 |
| Aor51HI | AGCGCT | 1 cut(s) | 2491 |
| AoxI | GGCC | 5 cut(s) | 90, 283, 450, 667, 2353 |
| ApaLI | GTGCAC | 1 cut(s) | 1649 |
| ApeKI | GCWGC | 5 cut(s) | 353, 734, 756, 2422, 3548 |
| ApoI | RAATTY | 8 cut(s) | 245, 762, 1483, 1740, 1827, 2842, 3123, 3145 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 273, 305, 2607, 2639 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 822, 2517 |
| Asp718I | GGTACC | 1 cut(s) | 1160 |
| AspA2I | CCTAGG | 1 cut(s) | 1334 |
| AspLEI | GCGC | 1 cut(s) | 2492 |
| AspS9I | GGNCC | 2 cut(s) | 562, 3442 |
| AsuC2I | CCSGG | 2 cut(s) | 3038, 3039 |
| AsuHPI | GGTGA | 5 cut(s) | 467, 863, 2479, 3167, 3491 |
| AvaI | CYCGRG | 3 cut(s) | 1517, 1628, 3037 |
| AvaII | GGWCC | 2 cut(s) | 562, 3442 |
| AvrII | CCTAGG | 1 cut(s) | 1334 |
| BaeGI | GKGCMC | 2 cut(s) | 1653, 2459 |
| BalI | TGGCCA | 1 cut(s) | 92 |
| BanI | GGYRCC | 3 cut(s) | 275, 1160, 2454 |
| BauI | CACGAG | 1 cut(s) | 3492 |
| BbsI | GAAGAC | 1 cut(s) | 3489 |
| Bbv12I | GWGCWC | 2 cut(s) | 924, 1653 |
| BbvI | GCAGC | 5 cut(s) | 365, 721, 768, 2409, 3560 |
| BceAI | ACGGC | 1 cut(s) | 2606 |
| BciT130I | CCWGG | 5 cut(s) | 7, 1032, 2565, 3096, 3449 |
| BciVI | GTATCC | 1 cut(s) | 963 |
| BclI | TGATCA | 5 cut(s) | 372, 2557, 3325, 3520, 3601 |
| BcnI | CCSGG | 2 cut(s) | 3038, 3039 |
| BfaI | CTAG | 6 cut(s) | 357, 462, 881, 1335, 1469, 2441 |
| BfmI | CTRYAG | 2 cut(s) | 2793, 3368 |
| BfoI | RGCGCY | 1 cut(s) | 2493 |
| BfrI | CTTAAG | 1 cut(s) | 1249 |
| BfuAI | ACCTGC | 1 cut(s) | 1035 |
| BfuI | GTATCC | 1 cut(s) | 963 |
| BisI | GCNGC | 6 cut(s) | 354, 735, 757, 2402, 2423, 3549 |
| BlnI | CCTAGG | 1 cut(s) | 1334 |
| BlsI | GCNGC | 6 cut(s) | 355, 736, 758, 2403, 2424, 3550 |
| BmcAI | AGTACT | 1 cut(s) | 3011 |
| Bme1390I | CCNGG | 7 cut(s) | 7, 1032, 2565, 3038, 3039, 3096, 3449 |
| Bme18I | GGWCC | 2 cut(s) | 562, 3442 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2944 |
| BmeT110I | CYCGRG | 3 cut(s) | 1517, 1628, 3037 |
| BmgBI | CACGTC | 2 cut(s) | 1888, 2026 |
| BmgT120I | GGNCC | 2 cut(s) | 562, 3442 |
| BmiI | GGNNCC | 4 cut(s) | 277, 1162, 2456, 3443 |
| BmrFI | CCNGG | 7 cut(s) | 7, 1032, 2565, 3038, 3039, 3096, 3449 |
| BmrI | ACTGGG | 1 cut(s) | 95 |
| BmuI | ACTGGG | 1 cut(s) | 95 |
| BpiI | GAAGAC | 1 cut(s) | 3489 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1554 |
| BpuEI | CTTGAG | 2 cut(s) | 648, 1580 |
| BpuMI | CCSGG | 2 cut(s) | 3038, 3039 |
| Bsa29I | ATCGAT | 2 cut(s) | 948, 1853 |
| BsaAI | YACGTR | 1 cut(s) | 3337 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1984, 3134, 3603 |
| BsaHI | GRCGYC | 2 cut(s) | 2593, 2988 |
| BsaJI | CCNNGG | 6 cut(s) | 1334, 1734, 1872, 2010, 3037, 3140 |
| BsaWI | WCCGGW | 1 cut(s) | 2875 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 623, 676, 2464, 2589, 2917, 2997, 3585 |
| Bse118I | RCCGGY | 1 cut(s) | 452 |
| Bse1I | ACTGG | 7 cut(s) | 24, 101, 1096, 2469, 2862, 2922, 3017 |
| Bse3DI | GCAATG | 5 cut(s) | 355, 657, 715, 831, 2285 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1984, 3134, 3603 |
| BseBI | CCWGG | 5 cut(s) | 7, 1032, 2565, 3096, 3449 |
| BseCI | ATCGAT | 2 cut(s) | 948, 1853 |
| BseDI | CCNNGG | 6 cut(s) | 1334, 1734, 1872, 2010, 3037, 3140 |
| BseJI | GATNNNNATC | 3 cut(s) | 1984, 3134, 3603 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 623, 676, 2464, 2589, 2917, 2997, 3585 |
| BseMI | GCAATG | 5 cut(s) | 355, 657, 715, 831, 2285 |
| BseMII | CTCAG | 2 cut(s) | 3303, 3420 |
| BseNI | ACTGG | 7 cut(s) | 24, 101, 1096, 2469, 2862, 2922, 3017 |
| BseSI | GKGCMC | 2 cut(s) | 1653, 2459 |
| BseXI | GCAGC | 5 cut(s) | 365, 721, 768, 2409, 3560 |
| BseYI | CCCAGC | 2 cut(s) | 2583, 2704 |
| BsgI | GTGCAG | 1 cut(s) | 2529 |
| Bsh1236I | CGCG | 1 cut(s) | 2165 |
| Bsh1285I | CGRYCG | 1 cut(s) | 952 |
| BshFI | GGCC | 5 cut(s) | 92, 285, 452, 669, 2355 |
| BshNI | GGYRCC | 3 cut(s) | 275, 1160, 2454 |
| BshVI | ATCGAT | 2 cut(s) | 948, 1853 |
| BsiEI | CGRYCG | 1 cut(s) | 952 |
| BsiHKAI | GWGCWC | 2 cut(s) | 924, 1653 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1517, 1628, 3037 |
| BsiSI | CCGG | 3 cut(s) | 453, 2876, 3038 |
| BslFI | GGGAC | 2 cut(s) | 919, 1909 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 623, 676, 2464, 2589, 2917, 2997, 3585 |
| BsmBI | CGTCTC | 1 cut(s) | 153 |
| BsmFI | GGGAC | 2 cut(s) | 919, 1909 |
| BsmI | GAATGC | 2 cut(s) | 601, 1708 |
| BsnI | GGCC | 5 cut(s) | 92, 285, 452, 669, 2355 |
| BsoBI | CYCGRG | 3 cut(s) | 1517, 1628, 3037 |
| Bsp1286I | GDGCHC | 3 cut(s) | 924, 1653, 2459 |
| BspACI | CCGC | 3 cut(s) | 2290, 2402, 3584 |
| BspANI | GGCC | 5 cut(s) | 92, 285, 452, 669, 2355 |
| BspCNI | CTCAG | 2 cut(s) | 3302, 3419 |
| BspDI | ATCGAT | 2 cut(s) | 948, 1853 |
| BspFNI | CGCG | 1 cut(s) | 2165 |
| BspHI | TCATGA | 5 cut(s) | 34, 3100, 3262, 3322, 3607 |
| BspLI | GGNNCC | 4 cut(s) | 277, 1162, 2456, 3443 |
| BspMI | ACCTGC | 1 cut(s) | 1035 |
| BspPI | GGATC | 7 cut(s) | 124, 441, 1022, 3267, 3387, 3418, 3474 |
| BspT107I | GGYRCC | 3 cut(s) | 275, 1160, 2454 |
| BspTI | CTTAAG | 1 cut(s) | 1249 |
| BsrDI | GCAATG | 5 cut(s) | 355, 657, 715, 831, 2285 |
| BsrFI | RCCGGY | 1 cut(s) | 452 |
| BsrI | ACTGG | 7 cut(s) | 24, 101, 1096, 2469, 2862, 2922, 3017 |
| BssAI | RCCGGY | 1 cut(s) | 452 |
| BssECI | CCNNGG | 6 cut(s) | 1334, 1734, 1872, 2010, 3037, 3140 |
| BssNAI | GTATAC | 1 cut(s) | 3334 |
| BssNI | GRCGYC | 2 cut(s) | 2593, 2988 |
| BssSI | CACGAG | 1 cut(s) | 3492 |
| BssT1I | CCWWGG | 5 cut(s) | 1334, 1734, 1872, 2010, 3140 |
| Bst1107I | GTATAC | 1 cut(s) | 3334 |
| Bst2BI | CACGAG | 1 cut(s) | 3492 |
| Bst2UI | CCWGG | 5 cut(s) | 7, 1032, 2565, 3096, 3449 |
| Bst4CI | ACNGT | 9 cut(s) | 688, 1017, 1040, 1205, 1274, 1351, 2408, 3238, 3269 |
| Bst6I | CTCTTC | 2 cut(s) | 151, 2523 |
| BstACI | GRCGYC | 2 cut(s) | 2593, 2988 |
| BstAFI | CTTAAG | 1 cut(s) | 1249 |
| BstBAI | YACGTR | 1 cut(s) | 3337 |
| BstC8I | GCNNGC | 3 cut(s) | 732, 2488, 2710 |
| BstDEI | CTNAG | 8 cut(s) | 518, 1187, 1554, 1682, 1962, 2100, 3289, 3406 |
| BstEII | GGTNACC | 1 cut(s) | 455 |
| BstFNI | CGCG | 1 cut(s) | 2165 |
| BstH2I | RGCGCY | 1 cut(s) | 2493 |
| BstHHI | GCGC | 1 cut(s) | 2492 |
| BstMCI | CGRYCG | 1 cut(s) | 952 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 2428, 3536, 3545, 3701 |
| BstNI | CCWGG | 5 cut(s) | 7, 1032, 2565, 3096, 3449 |
| BstNSI | RCATGY | 5 cut(s) | 840, 869, 1180, 2712, 3351 |
| BstPI | GGTNACC | 1 cut(s) | 455 |
| BstSCI | CCNGG | 7 cut(s) | 5, 1030, 2563, 3036, 3037, 3094, 3447 |
| BstSFI | CTRYAG | 2 cut(s) | 2793, 3368 |
| BstSLI | GKGCMC | 2 cut(s) | 1653, 2459 |
| BstUI | CGCG | 1 cut(s) | 2165 |
| BstV1I | GCAGC | 5 cut(s) | 365, 721, 768, 2409, 3560 |
| BstV2I | GAAGAC | 1 cut(s) | 3489 |
| BstX2I | RGATCY | 1 cut(s) | 129 |
| BstYI | RGATCY | 1 cut(s) | 129 |
| BstZ17I | GTATAC | 1 cut(s) | 3334 |
| Bsu15I | ATCGAT | 2 cut(s) | 948, 1853 |
| BsuI | GTATCC | 1 cut(s) | 963 |
| BsuRI | GGCC | 5 cut(s) | 92, 285, 452, 669, 2355 |
| BsuTUI | ATCGAT | 2 cut(s) | 948, 1853 |
| BtrI | CACGTC | 2 cut(s) | 1888, 2026 |
| BtsI | GCAGTG | 2 cut(s) | 816, 3702 |
| BtsIMutI | CAGTG | 5 cut(s) | 816, 2413, 2855, 3274, 3702 |
| BveI | ACCTGC | 1 cut(s) | 1035 |
| Cac8I | GCNNGC | 3 cut(s) | 732, 2488, 2710 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2627 |
| CciI | TCATGA | 5 cut(s) | 34, 3100, 3262, 3322, 3607 |
| CfoI | GCGC | 1 cut(s) | 2492 |
| Cfr10I | RCCGGY | 1 cut(s) | 452 |
| Cfr13I | GGNCC | 2 cut(s) | 562, 3442 |
| Cfr9I | CCCGGG | 1 cut(s) | 3037 |
| ClaI | ATCGAT | 2 cut(s) | 948, 1853 |
| CseI | GACGC | 5 cut(s) | 2154, 2171, 2582, 2996, 3545 |
| Csp6I | GTAC | 7 cut(s) | 97, 391, 863, 1161, 1861, 2879, 3010 |
| CviQI | GTAC | 7 cut(s) | 97, 391, 863, 1161, 1861, 2879, 3010 |
| DdeI | CTNAG | 8 cut(s) | 518, 1187, 1554, 1682, 1962, 2100, 3289, 3406 |
| DraI | TTTAAA | 4 cut(s) | 604, 777, 847, 2841 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2944 |
| EaeI | YGGCCR | 2 cut(s) | 90, 450 |
| Eam1104I | CTCTTC | 2 cut(s) | 151, 2523 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2944 |
| EarI | CTCTTC | 2 cut(s) | 151, 2523 |
| Eco130I | CCWWGG | 5 cut(s) | 1334, 1734, 1872, 2010, 3140 |
| Eco147I | AGGCCT | 2 cut(s) | 285, 669 |
| Eco47I | GGWCC | 2 cut(s) | 562, 3442 |
| Eco47III | AGCGCT | 1 cut(s) | 2491 |
| Eco57I | CTGAAG | 2 cut(s) | 603, 1152 |
| Eco88I | CYCGRG | 3 cut(s) | 1517, 1628, 3037 |
| Eco91I | GGTNACC | 1 cut(s) | 455 |
| EcoO65I | GGTNACC | 1 cut(s) | 455 |
| EcoRII | CCWGG | 5 cut(s) | 5, 1030, 2563, 3094, 3447 |
| EcoT14I | CCWWGG | 5 cut(s) | 1334, 1734, 1872, 2010, 3140 |
| EcoT22I | ATGCAT | 1 cut(s) | 2714 |
| ErhI | CCWWGG | 5 cut(s) | 1334, 1734, 1872, 2010, 3140 |
| Esp3I | CGTCTC | 1 cut(s) | 153 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 601, 633, 810, 842 |
| FaqI | GGGAC | 2 cut(s) | 919, 1909 |
| FauI | CCCGC | 1 cut(s) | 3577 |
| FauNDI | CATATG | 1 cut(s) | 168 |
| FbaI | TGATCA | 5 cut(s) | 372, 2557, 3325, 3520, 3601 |
| FblI | GTMKAC | 1 cut(s) | 3333 |
| Fnu4HI | GCNGC | 6 cut(s) | 354, 735, 757, 2402, 2423, 3549 |
| Fsp4HI | GCNGC | 6 cut(s) | 354, 735, 757, 2402, 2423, 3549 |
| FspBI | CTAG | 6 cut(s) | 357, 462, 881, 1335, 1469, 2441 |
| GlaI | GCGC | 1 cut(s) | 2491 |
| GluI | GCNGC | 6 cut(s) | 354, 735, 757, 2402, 2423, 3549 |
| GsaI | CCCAGC | 2 cut(s) | 2587, 2708 |
| HaeII | RGCGCY | 1 cut(s) | 2493 |
| HaeIII | GGCC | 5 cut(s) | 92, 285, 452, 669, 2355 |
| HapII | CCGG | 3 cut(s) | 453, 2876, 3038 |
| HgaI | GACGC | 5 cut(s) | 2154, 2171, 2582, 2996, 3545 |
| HhaI | GCGC | 1 cut(s) | 2492 |
| Hin1I | GRCGYC | 2 cut(s) | 2593, 2988 |
| Hin6I | GCGC | 1 cut(s) | 2490 |
| HinP1I | GCGC | 1 cut(s) | 2490 |
| HincII | GTYRAC | 1 cut(s) | 614 |
| HindII | GTYRAC | 1 cut(s) | 614 |
| HindIII | AAGCTT | 3 cut(s) | 819, 885, 1556 |
| HpaII | CCGG | 3 cut(s) | 453, 2876, 3038 |
| HphI | GGTGA | 5 cut(s) | 467, 863, 2479, 3167, 3491 |
| Hpy166II | GTNNAC | 8 cut(s) | 614, 1009, 1069, 1651, 2413, 3079, 3334, 3445 |
| Hpy8I | GTNNAC | 8 cut(s) | 614, 1009, 1069, 1651, 2413, 3079, 3334, 3445 |
| Hpy99I | CGWCG | 1 cut(s) | 120 |
| HpyCH4III | ACNGT | 9 cut(s) | 688, 1017, 1040, 1205, 1274, 1351, 2408, 3238, 3269 |
| HpyCH4IV | ACGT | 8 cut(s) | 115, 162, 646, 1459, 1887, 2025, 3336, 3637 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 2428, 3536, 3545, 3701 |
| HpyF3I | CTNAG | 8 cut(s) | 518, 1187, 1554, 1682, 1962, 2100, 3289, 3406 |
| HpySE526I | ACGT | 8 cut(s) | 115, 162, 646, 1459, 1887, 2025, 3336, 3637 |
| Hsp92I | GRCGYC | 2 cut(s) | 2593, 2988 |
| HspAI | GCGC | 1 cut(s) | 2490 |
| KpnI | GGTACC | 1 cut(s) | 1164 |
| Ksp22I | TGATCA | 5 cut(s) | 372, 2557, 3325, 3520, 3601 |
| LmnI | GCTCC | 4 cut(s) | 244, 1600, 3364, 3616 |
| Lsp1109I | GCAGC | 5 cut(s) | 365, 721, 768, 2409, 3560 |
| MaeI | CTAG | 6 cut(s) | 357, 462, 881, 1335, 1469, 2441 |
| MaeII | ACGT | 8 cut(s) | 115, 162, 646, 1459, 1887, 2025, 3336, 3637 |
| MaeIII | GTNAC | 6 cut(s) | 455, 785, 1274, 1340, 2467, 3232 |
| MfeI | CAATTG | 7 cut(s) | 234, 1923, 2061, 2130, 2199, 2268, 2337 |
| MflI | RGATCY | 1 cut(s) | 129 |
| MhlI | GDGCHC | 3 cut(s) | 924, 1653, 2459 |
| MlsI | TGGCCA | 1 cut(s) | 92 |
| MluI | ACGCGT | 1 cut(s) | 2163 |
| MluNI | TGGCCA | 1 cut(s) | 92 |
| MlyI | GAGTC | 8 cut(s) | 1348, 1546, 1670, 1672, 1891, 2098, 3281, 3320 |
| MmeI | TCCRAC | 8 cut(s) | 25, 85, 1197, 1489, 1565, 2558, 2808, 3671 |
| Mox20I | TGGCCA | 1 cut(s) | 92 |
| Mph1103I | ATGCAT | 1 cut(s) | 2714 |
| MroXI | GAANNNNTTC | 2 cut(s) | 822, 2517 |
| MscI | TGGCCA | 1 cut(s) | 92 |
| MslI | CAYNNNNRTG | 8 cut(s) | 1062, 1118, 2939, 3086, 3267, 3327, 3474, 3609 |
| Msp20I | TGGCCA | 1 cut(s) | 92 |
| MspA1I | CMGCKG | 1 cut(s) | 3551 |
| MspCI | CTTAAG | 1 cut(s) | 1249 |
| MspI | CCGG | 3 cut(s) | 453, 2876, 3038 |
| MspR9I | CCNGG | 7 cut(s) | 7, 1032, 2565, 3038, 3039, 3096, 3449 |
| MunI | CAATTG | 7 cut(s) | 234, 1923, 2061, 2130, 2199, 2268, 2337 |
| Mva1269I | GAATGC | 2 cut(s) | 601, 1708 |
| MvaI | CCWGG | 5 cut(s) | 7, 1032, 2565, 3096, 3449 |
| MvnI | CGCG | 1 cut(s) | 2165 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 2428, 3536, 3545, 3701 |
| NciI | CCSGG | 2 cut(s) | 3038, 3039 |
| NdeI | CATATG | 1 cut(s) | 168 |
| NlaIV | GGNNCC | 4 cut(s) | 277, 1162, 2456, 3443 |
| NmuCI | GTSAC | 5 cut(s) | 455, 1274, 1340, 2467, 3232 |
| NsiI | ATGCAT | 1 cut(s) | 2714 |
| NspI | RCATGY | 5 cut(s) | 840, 869, 1180, 2712, 3351 |
| OliI | CACNNNNGTG | 1 cut(s) | 3086 |
| PaeI | GCATGC | 1 cut(s) | 2712 |
| PaeR7I | CTCGAG | 2 cut(s) | 1517, 1628 |
| PagI | TCATGA | 5 cut(s) | 34, 3100, 3262, 3322, 3607 |
| PceI | AGGCCT | 2 cut(s) | 285, 669 |
| PciI | ACATGT | 2 cut(s) | 865, 3347 |
| PctI | GAATGC | 2 cut(s) | 601, 1708 |
| PdmI | GAANNNNTTC | 2 cut(s) | 822, 2517 |
| PfeI | GAWTC | 9 cut(s) | 20, 319, 1136, 1365, 1465, 1512, 2513, 2641, 2971 |
| PflFI | GACNNNGTC | 2 cut(s) | 1004, 3310 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2917 |
| PfoI | TCCNGGA | 1 cut(s) | 1030 |
| PkrI | GCNGC | 6 cut(s) | 355, 736, 758, 2403, 2424, 3550 |
| Ple19I | CGATCG | 1 cut(s) | 952 |
| PleI | GAGTC | 8 cut(s) | 1347, 1545, 1669, 1672, 1891, 2098, 3281, 3319 |
| PpsI | GAGTC | 8 cut(s) | 1347, 1545, 1669, 1672, 1891, 2098, 3281, 3319 |
| Ppu21I | YACGTR | 1 cut(s) | 3337 |
| PscI | ACATGT | 2 cut(s) | 865, 3347 |
| Psp1406I | AACGTT | 1 cut(s) | 1459 |
| Psp6I | CCWGG | 5 cut(s) | 5, 1030, 2563, 3094, 3447 |
| PspEI | GGTNACC | 1 cut(s) | 455 |
| PspFI | CCCAGC | 2 cut(s) | 2583, 2704 |
| PspGI | CCWGG | 5 cut(s) | 5, 1030, 2563, 3094, 3447 |
| PspN4I | GGNNCC | 4 cut(s) | 277, 1162, 2456, 3443 |
| PspPI | GGNCC | 2 cut(s) | 562, 3442 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2993, 3025 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2627 |
| PsuI | RGATCY | 1 cut(s) | 129 |
| PsyI | GACNNNGTC | 2 cut(s) | 1004, 3310 |
| PvuI | CGATCG | 1 cut(s) | 952 |
| PvuII | CAGCTG | 1 cut(s) | 3551 |
| RsaI | GTAC | 7 cut(s) | 98, 392, 864, 1162, 1862, 2880, 3011 |
| RsaNI | GTAC | 7 cut(s) | 97, 391, 863, 1161, 1861, 2879, 3010 |
| RseI | CAYNNNNRTG | 8 cut(s) | 1062, 1118, 2939, 3086, 3267, 3327, 3474, 3609 |
| SatI | GCNGC | 6 cut(s) | 354, 735, 757, 2402, 2423, 3549 |
| Sau96I | GGNCC | 2 cut(s) | 562, 3442 |
| ScaI | AGTACT | 1 cut(s) | 3011 |
| SchI | GAGTC | 8 cut(s) | 1348, 1546, 1670, 1672, 1891, 2098, 3281, 3320 |
| ScrFI | CCNGG | 7 cut(s) | 7, 1032, 2565, 3038, 3039, 3096, 3449 |
| SduI | GDGCHC | 3 cut(s) | 924, 1653, 2459 |
| SfcI | CTRYAG | 2 cut(s) | 2793, 3368 |
| Sfr274I | CTCGAG | 2 cut(s) | 1517, 1628 |
| SinI | GGWCC | 2 cut(s) | 562, 3442 |
| SlaI | CTCGAG | 2 cut(s) | 1517, 1628 |
| SmaI | CCCGGG | 1 cut(s) | 3039 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 1062, 1118, 2939, 3086, 3267, 3327, 3474, 3609 |
| SmlI | CTYRAG | 5 cut(s) | 663, 1249, 1517, 1559, 1628 |
| SmoI | CTYRAG | 5 cut(s) | 663, 1249, 1517, 1559, 1628 |
| SphI | GCATGC | 1 cut(s) | 2712 |
| SseBI | AGGCCT | 2 cut(s) | 285, 669 |
| SsiI | CCGC | 3 cut(s) | 2290, 2402, 3584 |
| SspI | AATATT | 1 cut(s) | 3019 |
| SspMI | CTAG | 6 cut(s) | 357, 462, 881, 1335, 1469, 2441 |
| StuI | AGGCCT | 2 cut(s) | 285, 669 |
| StyD4I | CCNGG | 7 cut(s) | 5, 1030, 2563, 3036, 3037, 3094, 3447 |
| StyI | CCWWGG | 5 cut(s) | 1334, 1734, 1872, 2010, 3140 |
| TaaI | ACNGT | 9 cut(s) | 688, 1017, 1040, 1205, 1274, 1351, 2408, 3238, 3269 |
| TaiI | ACGT | 8 cut(s) | 118, 165, 649, 1462, 1890, 2028, 3339, 3640 |
| TatI | WGTACW | 3 cut(s) | 390, 862, 3009 |
| TauI | GCSGC | 1 cut(s) | 2404 |
| TfiI | GAWTC | 9 cut(s) | 20, 319, 1136, 1365, 1465, 1512, 2513, 2641, 2971 |
| TscAI | CASTG | 5 cut(s) | 816, 2413, 2862, 3274, 3702 |
| TseFI | GTSAC | 5 cut(s) | 455, 1274, 1340, 2467, 3232 |
| TseI | GCWGC | 5 cut(s) | 353, 734, 756, 2422, 3548 |
| Tsp45I | GTSAC | 5 cut(s) | 455, 1274, 1340, 2467, 3232 |
| TspGWI | ACGGA | 1 cut(s) | 2430 |
| TspMI | CCCGGG | 1 cut(s) | 3037 |
| TspRI | CASTG | 5 cut(s) | 816, 2413, 2862, 3274, 3702 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1004, 3310 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2917 |
| Vha464I | CTTAAG | 1 cut(s) | 1249 |
| VneI | GTGCAC | 1 cut(s) | 1649 |
| VpaK11BI | GGWCC | 2 cut(s) | 562, 3442 |
| XapI | RAATTY | 8 cut(s) | 245, 762, 1483, 1740, 1827, 2842, 3123, 3145 |
| XbaI | TCTAGA | 2 cut(s) | 1468, 2440 |
| XceI | RCATGY | 5 cut(s) | 840, 869, 1180, 2712, 3351 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1992 |
| XhoI | CTCGAG | 2 cut(s) | 1517, 1628 |
| XmaI | CCCGGG | 1 cut(s) | 3037 |
| XmaJI | CCTAGG | 1 cut(s) | 1334 |
| XmiI | GTMKAC | 1 cut(s) | 3333 |
| XmnI | GAANNNNTTC | 2 cut(s) | 822, 2517 |
| XspI | CTAG | 6 cut(s) | 357, 462, 881, 1335, 1469, 2441 |
| ZrmI | AGTACT | 1 cut(s) | 3011 |
| Zsp2I | ATGCAT | 1 cut(s) | 2714 |