TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 16 - 100 | 2.4e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 627 |
| AccBSI | CCGCTC | 1 cut(s) | 180 |
| AccII | CGCG | 1 cut(s) | 38 |
| AciI | CCGC | 2 cut(s) | 36, 180 |
| AclWI | GGATC | 1 cut(s) | 717 |
| AcsI | RAATTY | 7 cut(s) | 149, 201, 264, 352, 449, 536, 559 |
| AcvI | CACGTG | 1 cut(s) | 95 |
| AfaI | GTAC | 3 cut(s) | 64, 168, 663 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 87, 88, 687, 960 |
| AflIII | ACRYGT | 1 cut(s) | 785 |
| AgsI | TTSAA | 6 cut(s) | 536, 548, 565, 672, 699, 743 |
| AhlI | ACTAGT | 1 cut(s) | 664 |
| AluBI | AGCT | 5 cut(s) | 211, 501, 834, 883, 1012 |
| AluI | AGCT | 5 cut(s) | 211, 501, 834, 883, 1012 |
| Alw26I | GTCTC | 1 cut(s) | 599 |
| AlwI | GGATC | 1 cut(s) | 717 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 345 |
| ApeKI | GCWGC | 3 cut(s) | 183, 336, 721 |
| ApoI | RAATTY | 7 cut(s) | 149, 201, 264, 352, 449, 536, 559 |
| AspLEI | GCGC | 1 cut(s) | 50 |
| AsuHPI | GGTGA | 3 cut(s) | 25, 670, 895 |
| AsuII | TTCGAA | 1 cut(s) | 269 |
| BaeGI | GKGCMC | 1 cut(s) | 94 |
| BbrPI | CACGTG | 1 cut(s) | 95 |
| BbsI | GAAGAC | 1 cut(s) | 873 |
| BbvI | GCAGC | 3 cut(s) | 170, 323, 708 |
| BccI | CCATC | 2 cut(s) | 313, 358 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 175, 209 |
| BcoDI | GTCTC | 1 cut(s) | 599 |
| BcuI | ACTAGT | 1 cut(s) | 664 |
| BfaI | CTAG | 3 cut(s) | 23, 60, 665 |
| BfmI | CTRYAG | 3 cut(s) | 184, 337, 891 |
| BfuAI | ACCTGC | 1 cut(s) | 627 |
| BisI | GCNGC | 4 cut(s) | 181, 184, 337, 722 |
| BlsI | GCNGC | 4 cut(s) | 182, 185, 338, 723 |
| BmcAI | AGTACT | 2 cut(s) | 64, 663 |
| BmiI | GGNNCC | 2 cut(s) | 6, 486 |
| BmsI | GCATC | 5 cut(s) | 35, 86, 150, 532, 979 |
| BpiI | GAAGAC | 1 cut(s) | 873 |
| Bpu14I | TTCGAA | 1 cut(s) | 269 |
| Bsa29I | ATCGAT | 1 cut(s) | 28 |
| BsaAI | YACGTR | 2 cut(s) | 95, 786 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 87, 88, 687, 960 |
| Bse118I | RCCGGY | 1 cut(s) | 228 |
| Bse1I | ACTGG | 3 cut(s) | 467, 906, 1002 |
| Bse3DI | GCAATG | 1 cut(s) | 770 |
| BseCI | ATCGAT | 1 cut(s) | 28 |
| BseGI | GGATG | 4 cut(s) | 50, 77, 241, 382 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 87, 88, 687, 960 |
| BseMI | GCAATG | 1 cut(s) | 770 |
| BseMII | CTCAG | 1 cut(s) | 452 |
| BseNI | ACTGG | 3 cut(s) | 467, 906, 1002 |
| BseRI | GAGGAG | 1 cut(s) | 329 |
| BseSI | GKGCMC | 1 cut(s) | 94 |
| BseXI | GCAGC | 3 cut(s) | 170, 323, 708 |
| BseYI | CCCAGC | 1 cut(s) | 834 |
| BsgI | GTGCAG | 1 cut(s) | 707 |
| Bsh1236I | CGCG | 1 cut(s) | 38 |
| BshVI | ATCGAT | 1 cut(s) | 28 |
| BsiSI | CCGG | 2 cut(s) | 8, 229 |
| BslFI | GGGAC | 3 cut(s) | 584, 936, 953 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 87, 88, 687, 960 |
| BsmAI | GTCTC | 1 cut(s) | 599 |
| BsmFI | GGGAC | 3 cut(s) | 584, 936, 953 |
| BsmI | GAATGC | 1 cut(s) | 143 |
| Bsp119I | TTCGAA | 1 cut(s) | 269 |
| Bsp1286I | GDGCHC | 1 cut(s) | 94 |
| Bsp143I | GATC | 3 cut(s) | 25, 412, 709 |
| BspACI | CCGC | 2 cut(s) | 36, 180 |
| BspCNI | CTCAG | 1 cut(s) | 451 |
| BspDI | ATCGAT | 1 cut(s) | 28 |
| BspFNI | CGCG | 1 cut(s) | 38 |
| BspLI | GGNNCC | 2 cut(s) | 6, 486 |
| BspMAI | CTGCAG | 3 cut(s) | 188, 341, 895 |
| BspMI | ACCTGC | 1 cut(s) | 627 |
| BspPI | GGATC | 1 cut(s) | 717 |
| BspT104I | TTCGAA | 1 cut(s) | 269 |
| BsrBI | CCGCTC | 1 cut(s) | 180 |
| BsrDI | GCAATG | 1 cut(s) | 770 |
| BsrFI | RCCGGY | 1 cut(s) | 228 |
| BsrI | ACTGG | 3 cut(s) | 467, 906, 1002 |
| BssAI | RCCGGY | 1 cut(s) | 228 |
| BssMI | GATC | 3 cut(s) | 25, 412, 709 |
| Bst4CI | ACNGT | 1 cut(s) | 531 |
| Bst6I | CTCTTC | 1 cut(s) | 422 |
| BstBAI | YACGTR | 2 cut(s) | 95, 786 |
| BstBI | TTCGAA | 1 cut(s) | 269 |
| BstDEI | CTNAG | 2 cut(s) | 438, 816 |
| BstF5I | GGATG | 4 cut(s) | 50, 77, 241, 382 |
| BstFNI | CGCG | 1 cut(s) | 38 |
| BstHHI | GCGC | 1 cut(s) | 50 |
| BstKTI | GATC | 3 cut(s) | 28, 415, 712 |
| BstMAI | GTCTC | 1 cut(s) | 599 |
| BstMBI | GATC | 3 cut(s) | 25, 412, 709 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 772 |
| BstSFI | CTRYAG | 3 cut(s) | 184, 337, 891 |
| BstSLI | GKGCMC | 1 cut(s) | 94 |
| BstUI | CGCG | 1 cut(s) | 38 |
| BstV1I | GCAGC | 3 cut(s) | 170, 323, 708 |
| BstV2I | GAAGAC | 1 cut(s) | 873 |
| Bsu15I | ATCGAT | 1 cut(s) | 28 |
| BsuTUI | ATCGAT | 1 cut(s) | 28 |
| BtsCI | GGATG | 4 cut(s) | 50, 77, 241, 382 |
| BveI | ACCTGC | 1 cut(s) | 627 |
| CaiI | CAGNNNCTG | 1 cut(s) | 345 |
| CfoI | GCGC | 1 cut(s) | 50 |
| Cfr10I | RCCGGY | 1 cut(s) | 228 |
| ClaI | ATCGAT | 1 cut(s) | 28 |
| CseI | GACGC | 2 cut(s) | 416, 755 |
| Csp6I | GTAC | 3 cut(s) | 63, 167, 662 |
| CviAII | CATG | 3 cut(s) | 517, 713, 826 |
| CviQI | GTAC | 3 cut(s) | 63, 167, 662 |
| DdeI | CTNAG | 2 cut(s) | 438, 816 |
| DpnI | GATC | 3 cut(s) | 27, 414, 711 |
| DpnII | GATC | 3 cut(s) | 25, 412, 709 |
| Eam1104I | CTCTTC | 1 cut(s) | 422 |
| EarI | CTCTTC | 1 cut(s) | 422 |
| Eco72I | CACGTG | 1 cut(s) | 95 |
| EcoRI | GAATTC | 1 cut(s) | 536 |
| EcoT22I | ATGCAT | 1 cut(s) | 143 |
| FaeI | CATG | 3 cut(s) | 520, 716, 829 |
| FaqI | GGGAC | 3 cut(s) | 584, 936, 953 |
| FatI | CATG | 3 cut(s) | 516, 712, 825 |
| Fnu4HI | GCNGC | 4 cut(s) | 181, 184, 337, 722 |
| FokI | GGATG | 4 cut(s) | 57, 64, 248, 389 |
| Fsp4HI | GCNGC | 4 cut(s) | 181, 184, 337, 722 |
| FspBI | CTAG | 3 cut(s) | 23, 60, 665 |
| GlaI | GCGC | 1 cut(s) | 49 |
| GluI | GCNGC | 4 cut(s) | 181, 184, 337, 722 |
| GsaI | CCCAGC | 1 cut(s) | 838 |
| HapII | CCGG | 2 cut(s) | 8, 229 |
| HgaI | GACGC | 2 cut(s) | 416, 755 |
| HhaI | GCGC | 1 cut(s) | 50 |
| Hin1II | CATG | 3 cut(s) | 520, 716, 829 |
| Hin6I | GCGC | 1 cut(s) | 48 |
| HinP1I | GCGC | 1 cut(s) | 48 |
| HinfI | GANTC | 6 cut(s) | 30, 299, 342, 426, 704, 792 |
| HpaII | CCGG | 2 cut(s) | 8, 229 |
| HphI | GGTGA | 3 cut(s) | 25, 670, 895 |
| Hpy166II | GTNNAC | 2 cut(s) | 406, 844 |
| Hpy188I | TCNGA | 3 cut(s) | 136, 363, 709 |
| Hpy188III | TCNNGA | 4 cut(s) | 111, 206, 699, 929 |
| Hpy8I | GTNNAC | 2 cut(s) | 406, 844 |
| HpyAV | CCTTC | 2 cut(s) | 745, 927 |
| HpyCH4III | ACNGT | 1 cut(s) | 531 |
| HpyCH4IV | ACGT | 3 cut(s) | 94, 785, 870 |
| HpyCH4V | TGCA | 9 cut(s) | 141, 186, 339, 557, 622, 724, 893, 972, 992 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 772 |
| HpyF3I | CTNAG | 2 cut(s) | 438, 816 |
| HpySE526I | ACGT | 3 cut(s) | 94, 785, 870 |
| Hsp92II | CATG | 3 cut(s) | 520, 716, 829 |
| HspAI | GCGC | 1 cut(s) | 48 |
| Kzo9I | GATC | 3 cut(s) | 25, 412, 709 |
| LmnI | GCTCC | 2 cut(s) | 4, 289 |
| Lsp1109I | GCAGC | 3 cut(s) | 170, 323, 708 |
| LweI | GCATC | 5 cut(s) | 35, 86, 150, 532, 979 |
| MaeI | CTAG | 3 cut(s) | 23, 60, 665 |
| MaeII | ACGT | 3 cut(s) | 94, 785, 870 |
| MalI | GATC | 3 cut(s) | 27, 414, 711 |
| MbiI | CCGCTC | 1 cut(s) | 180 |
| MboI | GATC | 3 cut(s) | 25, 412, 709 |
| MboII | GAAGA | 3 cut(s) | 409, 426, 878 |
| MhlI | GDGCHC | 1 cut(s) | 94 |
| MlyI | GAGTC | 4 cut(s) | 336, 420, 713, 801 |
| MmeI | TCCRAC | 2 cut(s) | 213, 687 |
| Mph1103I | ATGCAT | 1 cut(s) | 143 |
| MseI | TTAA | 1 cut(s) | 693 |
| MslI | CAYNNNNRTG | 1 cut(s) | 654 |
| MspA1I | CMGCKG | 1 cut(s) | 501 |
| MspI | CCGG | 2 cut(s) | 8, 229 |
| Mva1269I | GAATGC | 1 cut(s) | 143 |
| MvnI | CGCG | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 772 |
| NdeII | GATC | 3 cut(s) | 25, 412, 709 |
| NlaIII | CATG | 3 cut(s) | 520, 716, 829 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 486 |
| NsiI | ATGCAT | 1 cut(s) | 143 |
| NspV | TTCGAA | 1 cut(s) | 269 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 153 |
| PctI | GAATGC | 1 cut(s) | 143 |
| PfeI | GAWTC | 2 cut(s) | 30, 299 |
| PflFI | GACNNNGTC | 1 cut(s) | 345 |
| PkrI | GCNGC | 4 cut(s) | 182, 185, 338, 723 |
| PleI | GAGTC | 4 cut(s) | 336, 420, 712, 800 |
| PmaCI | CACGTG | 1 cut(s) | 95 |
| PmlI | CACGTG | 1 cut(s) | 95 |
| PpsI | GAGTC | 4 cut(s) | 336, 420, 712, 800 |
| Ppu21I | YACGTR | 2 cut(s) | 95, 786 |
| PspCI | CACGTG | 1 cut(s) | 95 |
| PspFI | CCCAGC | 1 cut(s) | 834 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 486 |
| PstI | CTGCAG | 3 cut(s) | 188, 341, 895 |
| PstNI | CAGNNNCTG | 1 cut(s) | 345 |
| PsyI | GACNNNGTC | 1 cut(s) | 345 |
| PvuII | CAGCTG | 1 cut(s) | 501 |
| RsaI | GTAC | 3 cut(s) | 64, 168, 663 |
| RsaNI | GTAC | 3 cut(s) | 63, 167, 662 |
| RseI | CAYNNNNRTG | 1 cut(s) | 654 |
| SaqAI | TTAA | 1 cut(s) | 693 |
| SatI | GCNGC | 4 cut(s) | 181, 184, 337, 722 |
| Sau3AI | GATC | 3 cut(s) | 25, 412, 709 |
| ScaI | AGTACT | 2 cut(s) | 64, 663 |
| SchI | GAGTC | 4 cut(s) | 336, 420, 713, 801 |
| SduI | GDGCHC | 1 cut(s) | 94 |
| SfaNI | GCATC | 5 cut(s) | 35, 86, 150, 532, 979 |
| SfcI | CTRYAG | 3 cut(s) | 184, 337, 891 |
| SfuI | TTCGAA | 1 cut(s) | 269 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 654 |
| SpeI | ACTAGT | 1 cut(s) | 664 |
| SsiI | CCGC | 2 cut(s) | 36, 180 |
| SspMI | CTAG | 3 cut(s) | 23, 60, 665 |
| TaaI | ACNGT | 1 cut(s) | 531 |
| TaiI | ACGT | 3 cut(s) | 97, 788, 873 |
| TaqI | TCGA | 4 cut(s) | 28, 269, 424, 790 |
| TatI | WGTACW | 2 cut(s) | 62, 661 |
| TauI | GCSGC | 1 cut(s) | 183 |
| TfiI | GAWTC | 2 cut(s) | 30, 299 |
| Tru1I | TTAA | 1 cut(s) | 693 |
| Tru9I | TTAA | 1 cut(s) | 693 |
| TseI | GCWGC | 3 cut(s) | 183, 336, 721 |
| TspDTI | ATGAA | 7 cut(s) | 505, 599, 672, 842, 879, 893, 909 |
| Tth111I | GACNNNGTC | 1 cut(s) | 345 |
| XapI | RAATTY | 7 cut(s) | 149, 201, 264, 352, 449, 536, 559 |
| XspI | CTAG | 3 cut(s) | 23, 60, 665 |
| ZrmI | AGTACT | 2 cut(s) | 64, 663 |
| Zsp2I | ATGCAT | 1 cut(s) | 143 |