TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 47 - 114 | 1.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 65 - 141 | 7.7e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 112 - 184 | 1.3e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 183 - 377 | 2.4e-20 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 531 |
| Acc16I | TGCGCA | 2 cut(s) | 335, 548 |
| Acc36I | ACCTGC | 1 cut(s) | 1293 |
| AccIII | TCCGGA | 1 cut(s) | 1057 |
| AciI | CCGC | 4 cut(s) | 314, 1030, 1151, 1215 |
| AclWI | GGATC | 2 cut(s) | 219, 714 |
| AcsI | RAATTY | 8 cut(s) | 4, 167, 236, 390, 603, 763, 825, 1053 |
| AcuI | CTGAAG | 4 cut(s) | 1353, 1430, 1452, 1476 |
| AcyI | GRCGYC | 1 cut(s) | 1154 |
| AfaI | GTAC | 2 cut(s) | 19, 88 |
| AhlI | ACTAGT | 1 cut(s) | 799 |
| AjnI | CCWGG | 1 cut(s) | 1384 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1168, 1200 |
| AluBI | AGCT | 5 cut(s) | 865, 1063, 1139, 1293, 1321 |
| AluI | AGCT | 5 cut(s) | 865, 1063, 1139, 1293, 1321 |
| Alw26I | GTCTC | 3 cut(s) | 1036, 1428, 1434 |
| AlwI | GGATC | 2 cut(s) | 219, 714 |
| Aor13HI | TCCGGA | 1 cut(s) | 1057 |
| AoxI | GGCC | 1 cut(s) | 1079 |
| ApeKI | GCWGC | 2 cut(s) | 377, 744 |
| ApoI | RAATTY | 8 cut(s) | 4, 167, 236, 390, 603, 763, 825, 1053 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 423 |
| AspLEI | GCGC | 2 cut(s) | 336, 549 |
| AspS9I | GGNCC | 2 cut(s) | 1234, 1276 |
| AsuC2I | CCSGG | 1 cut(s) | 1219 |
| AsuHPI | GGTGA | 4 cut(s) | 467, 988, 1149, 1415 |
| AvaII | GGWCC | 2 cut(s) | 1234, 1276 |
| BbsI | GAAGAC | 3 cut(s) | 974, 1176, 1359 |
| BbvI | GCAGC | 2 cut(s) | 364, 756 |
| BccI | CCATC | 3 cut(s) | 184, 397, 833 |
| BciT130I | CCWGG | 1 cut(s) | 1386 |
| BclI | TGATCA | 1 cut(s) | 1405 |
| BcnI | CCSGG | 1 cut(s) | 1219 |
| BcoDI | GTCTC | 3 cut(s) | 1036, 1428, 1434 |
| BcuI | ACTAGT | 1 cut(s) | 799 |
| BfaI | CTAG | 3 cut(s) | 318, 800, 1134 |
| BfmI | CTRYAG | 1 cut(s) | 866 |
| BfuAI | ACCTGC | 1 cut(s) | 1293 |
| BisI | GCNGC | 5 cut(s) | 314, 378, 745, 1152, 1215 |
| BlsI | GCNGC | 5 cut(s) | 315, 379, 746, 1153, 1216 |
| Bme1390I | CCNGG | 2 cut(s) | 1219, 1386 |
| Bme18I | GGWCC | 2 cut(s) | 1234, 1276 |
| BmgT120I | GGNCC | 2 cut(s) | 1234, 1276 |
| BmiI | GGNNCC | 3 cut(s) | 196, 1278, 1338 |
| BmrFI | CCNGG | 2 cut(s) | 1219, 1386 |
| BmsI | GCATC | 6 cut(s) | 343, 556, 878, 1002, 1235, 1469 |
| BpiI | GAAGAC | 3 cut(s) | 974, 1176, 1359 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1100, 1132 |
| BpmI | CTGGAG | 1 cut(s) | 1127 |
| BpuEI | CTTGAG | 4 cut(s) | 64, 182, 220, 646 |
| BpuMI | CCSGG | 1 cut(s) | 1219 |
| Bsa29I | ATCGAT | 1 cut(s) | 837 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1410 |
| BsaHI | GRCGYC | 1 cut(s) | 1154 |
| BsaWI | WCCGGW | 1 cut(s) | 1057 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1297, 1327 |
| Bse1I | ACTGG | 3 cut(s) | 125, 291, 1110 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1410 |
| BseAI | TCCGGA | 1 cut(s) | 1057 |
| BseBI | CCWGG | 1 cut(s) | 1386 |
| BseCI | ATCGAT | 1 cut(s) | 837 |
| BseGI | GGATG | 4 cut(s) | 20, 89, 893, 1460 |
| BseJI | GATNNNNATC | 1 cut(s) | 1410 |
| BseMII | CTCAG | 1 cut(s) | 1335 |
| BseNI | ACTGG | 3 cut(s) | 125, 291, 1110 |
| BseRI | GAGGAG | 1 cut(s) | 1302 |
| BseXI | GCAGC | 2 cut(s) | 364, 756 |
| BseYI | CCCAGC | 1 cut(s) | 933 |
| BsgI | GTGCAG | 2 cut(s) | 763, 1271 |
| BshFI | GGCC | 1 cut(s) | 1081 |
| BshVI | ATCGAT | 1 cut(s) | 837 |
| BsiSI | CCGG | 2 cut(s) | 1058, 1218 |
| BslFI | GGGAC | 1 cut(s) | 1262 |
| BsmAI | GTCTC | 3 cut(s) | 1036, 1428, 1434 |
| BsmFI | GGGAC | 1 cut(s) | 1262 |
| BsnI | GGCC | 1 cut(s) | 1081 |
| Bsp13I | TCCGGA | 1 cut(s) | 1057 |
| Bsp1407I | TGTACA | 2 cut(s) | 17, 86 |
| Bsp143I | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| BspACI | CCGC | 4 cut(s) | 314, 1030, 1151, 1215 |
| BspANI | GGCC | 1 cut(s) | 1081 |
| BspCNI | CTCAG | 1 cut(s) | 1336 |
| BspDI | ATCGAT | 1 cut(s) | 837 |
| BspEI | TCCGGA | 1 cut(s) | 1057 |
| BspHI | TCATGA | 1 cut(s) | 918 |
| BspLI | GGNNCC | 3 cut(s) | 196, 1278, 1338 |
| BspMI | ACCTGC | 1 cut(s) | 1293 |
| BspPI | GGATC | 2 cut(s) | 219, 714 |
| BspQI | GCTCTTC | 1 cut(s) | 1164 |
| BsrGI | TGTACA | 2 cut(s) | 17, 86 |
| BsrI | ACTGG | 3 cut(s) | 125, 291, 1110 |
| BssMI | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| BssNI | GRCGYC | 1 cut(s) | 1154 |
| Bst2UI | CCWGG | 1 cut(s) | 1386 |
| Bst4CI | ACNGT | 4 cut(s) | 741, 971, 1161, 1234 |
| Bst6I | CTCTTC | 1 cut(s) | 1164 |
| BstACI | GRCGYC | 1 cut(s) | 1154 |
| BstAUI | TGTACA | 2 cut(s) | 17, 86 |
| BstC8I | GCNNGC | 3 cut(s) | 158, 991, 1224 |
| BstDEI | CTNAG | 1 cut(s) | 1344 |
| BstF5I | GGATG | 4 cut(s) | 20, 89, 893, 1460 |
| BstHHI | GCGC | 2 cut(s) | 336, 549 |
| BstKTI | GATC | 6 cut(s) | 214, 709, 781, 958, 1408, 1414 |
| BstMAI | GTCTC | 3 cut(s) | 1036, 1428, 1434 |
| BstMBI | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1027, 1223 |
| BstNI | CCWGG | 1 cut(s) | 1386 |
| BstNSI | RCATGY | 1 cut(s) | 160 |
| BstSCI | CCNGG | 2 cut(s) | 1217, 1384 |
| BstSFI | CTRYAG | 1 cut(s) | 866 |
| BstV1I | GCAGC | 2 cut(s) | 364, 756 |
| BstV2I | GAAGAC | 3 cut(s) | 974, 1176, 1359 |
| BstX2I | RGATCY | 2 cut(s) | 211, 706 |
| BstYI | RGATCY | 2 cut(s) | 211, 706 |
| Bsu15I | ATCGAT | 1 cut(s) | 837 |
| BsuRI | GGCC | 1 cut(s) | 1081 |
| BsuTUI | ATCGAT | 1 cut(s) | 837 |
| BtsCI | GGATG | 4 cut(s) | 20, 89, 893, 1460 |
| BtsI | GCAGTG | 3 cut(s) | 442, 655, 1209 |
| BtsIMutI | CAGTG | 5 cut(s) | 442, 655, 889, 1103, 1209 |
| BveI | ACCTGC | 1 cut(s) | 1293 |
| Cac8I | GCNNGC | 3 cut(s) | 158, 991, 1224 |
| CciI | TCATGA | 1 cut(s) | 918 |
| CfoI | GCGC | 2 cut(s) | 336, 549 |
| Cfr13I | GGNCC | 2 cut(s) | 1234, 1276 |
| ClaI | ATCGAT | 1 cut(s) | 837 |
| CseI | GACGC | 1 cut(s) | 1143 |
| CsiI | ACCWGGT | 1 cut(s) | 1384 |
| Csp6I | GTAC | 2 cut(s) | 18, 87 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1397, 1432 |
| CviAII | CATG | 3 cut(s) | 157, 919, 1353 |
| CviQI | GTAC | 2 cut(s) | 18, 87 |
| DdeI | CTNAG | 1 cut(s) | 1344 |
| DpnI | GATC | 6 cut(s) | 213, 708, 780, 957, 1407, 1413 |
| DpnII | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| DraI | TTTAAA | 1 cut(s) | 768 |
| Eam1104I | CTCTTC | 1 cut(s) | 1164 |
| EarI | CTCTTC | 1 cut(s) | 1164 |
| Eco47I | GGWCC | 2 cut(s) | 1234, 1276 |
| Eco57I | CTGAAG | 4 cut(s) | 1353, 1430, 1452, 1476 |
| EcoRII | CCWGG | 1 cut(s) | 1384 |
| FaeI | CATG | 3 cut(s) | 160, 922, 1356 |
| FaqI | GGGAC | 1 cut(s) | 1262 |
| FatI | CATG | 3 cut(s) | 156, 918, 1352 |
| FauI | CCCGC | 1 cut(s) | 1023 |
| FbaI | TGATCA | 1 cut(s) | 1405 |
| Fnu4HI | GCNGC | 5 cut(s) | 314, 378, 745, 1152, 1215 |
| FokI | GGATG | 4 cut(s) | 7, 76, 900, 1447 |
| Fsp4HI | GCNGC | 5 cut(s) | 314, 378, 745, 1152, 1215 |
| FspBI | CTAG | 3 cut(s) | 318, 800, 1134 |
| FspI | TGCGCA | 2 cut(s) | 335, 548 |
| GlaI | GCGC | 2 cut(s) | 335, 548 |
| GluI | GCNGC | 5 cut(s) | 314, 378, 745, 1152, 1215 |
| GsaI | CCCAGC | 1 cut(s) | 937 |
| GsuI | CTGGAG | 1 cut(s) | 1127 |
| HaeIII | GGCC | 1 cut(s) | 1081 |
| HapII | CCGG | 2 cut(s) | 1058, 1218 |
| HgaI | GACGC | 1 cut(s) | 1143 |
| HhaI | GCGC | 2 cut(s) | 336, 549 |
| Hin1I | GRCGYC | 1 cut(s) | 1154 |
| Hin1II | CATG | 3 cut(s) | 160, 922, 1356 |
| Hin6I | GCGC | 2 cut(s) | 334, 547 |
| HinP1I | GCGC | 2 cut(s) | 334, 547 |
| HincII | GTYRAC | 1 cut(s) | 1009 |
| HindII | GTYRAC | 1 cut(s) | 1009 |
| HinfI | GANTC | 9 cut(s) | 73, 245, 407, 458, 671, 922, 1044, 1100, 1113 |
| HpaII | CCGG | 2 cut(s) | 1058, 1218 |
| HphI | GGTGA | 4 cut(s) | 467, 988, 1149, 1415 |
| Hpy166II | GTNNAC | 3 cut(s) | 87, 1009, 1237 |
| Hpy188III | TCNNGA | 9 cut(s) | 350, 386, 563, 625, 919, 926, 1058, 1117, 1409 |
| Hpy8I | GTNNAC | 3 cut(s) | 87, 1009, 1237 |
| Hpy99I | CGWCG | 1 cut(s) | 1234 |
| HpyCH4III | ACNGT | 4 cut(s) | 741, 971, 1161, 1234 |
| HpyCH4IV | ACGT | 1 cut(s) | 1074 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1027, 1223 |
| HpyF3I | CTNAG | 1 cut(s) | 1344 |
| HpySE526I | ACGT | 1 cut(s) | 1074 |
| Hsp92I | GRCGYC | 1 cut(s) | 1154 |
| Hsp92II | CATG | 3 cut(s) | 160, 922, 1356 |
| HspAI | GCGC | 2 cut(s) | 334, 547 |
| Kpn2I | TCCGGA | 1 cut(s) | 1057 |
| Ksp22I | TGATCA | 1 cut(s) | 1405 |
| Kzo9I | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| LguI | GCTCTTC | 1 cut(s) | 1164 |
| LmnI | GCTCC | 3 cut(s) | 1060, 1298, 1391 |
| Lsp1109I | GCAGC | 2 cut(s) | 364, 756 |
| LweI | GCATC | 6 cut(s) | 343, 556, 878, 1002, 1235, 1469 |
| MabI | ACCWGGT | 1 cut(s) | 1384 |
| MaeI | CTAG | 3 cut(s) | 318, 800, 1134 |
| MaeII | ACGT | 1 cut(s) | 1074 |
| MaeIII | GTNAC | 2 cut(s) | 437, 1155 |
| MalI | GATC | 6 cut(s) | 213, 708, 780, 957, 1407, 1413 |
| MboI | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| MboII | GAAGA | 5 cut(s) | 545, 974, 1176, 1181, 1359 |
| MfeI | CAATTG | 3 cut(s) | 249, 462, 1164 |
| MflI | RGATCY | 2 cut(s) | 211, 706 |
| MlyI | GAGTC | 5 cut(s) | 254, 467, 680, 916, 1038 |
| MmeI | TCCRAC | 3 cut(s) | 471, 684, 836 |
| MnlI | CCTC | 7 cut(s) | 157, 638, 765, 926, 1141, 1323, 1327 |
| MroI | TCCGGA | 1 cut(s) | 1057 |
| MroXI | GAANNNNTTC | 1 cut(s) | 423 |
| MseI | TTAA | 6 cut(s) | 8, 231, 398, 767, 966, 1398 |
| MspI | CCGG | 2 cut(s) | 1058, 1218 |
| MspR9I | CCNGG | 2 cut(s) | 1219, 1386 |
| MunI | CAATTG | 3 cut(s) | 249, 462, 1164 |
| MvaI | CCWGG | 1 cut(s) | 1386 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1027, 1223 |
| NciI | CCSGG | 1 cut(s) | 1219 |
| NdeII | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| NlaIII | CATG | 3 cut(s) | 160, 922, 1356 |
| NlaIV | GGNNCC | 3 cut(s) | 196, 1278, 1338 |
| NmuCI | GTSAC | 2 cut(s) | 437, 1155 |
| NsbI | TGCGCA | 2 cut(s) | 335, 548 |
| NspI | RCATGY | 1 cut(s) | 160 |
| PaeI | GCATGC | 1 cut(s) | 160 |
| PagI | TCATGA | 1 cut(s) | 918 |
| PciSI | GCTCTTC | 1 cut(s) | 1164 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 675 |
| PdmI | GAANNNNTTC | 1 cut(s) | 423 |
| PfeI | GAWTC | 4 cut(s) | 73, 407, 1100, 1113 |
| PkrI | GCNGC | 5 cut(s) | 315, 379, 746, 1153, 1216 |
| PleI | GAGTC | 5 cut(s) | 253, 466, 679, 916, 1038 |
| PpsI | GAGTC | 5 cut(s) | 253, 466, 679, 916, 1038 |
| PsiI | TTATAA | 1 cut(s) | 531 |
| Psp6I | CCWGG | 1 cut(s) | 1384 |
| PspFI | CCCAGC | 1 cut(s) | 933 |
| PspGI | CCWGG | 1 cut(s) | 1384 |
| PspN4I | GGNNCC | 3 cut(s) | 196, 1278, 1338 |
| PspPI | GGNCC | 2 cut(s) | 1234, 1276 |
| PsuI | RGATCY | 2 cut(s) | 211, 706 |
| RsaI | GTAC | 2 cut(s) | 19, 88 |
| RsaNI | GTAC | 2 cut(s) | 18, 87 |
| SapI | GCTCTTC | 1 cut(s) | 1164 |
| SaqAI | TTAA | 6 cut(s) | 8, 231, 398, 767, 966, 1398 |
| SatI | GCNGC | 5 cut(s) | 314, 378, 745, 1152, 1215 |
| Sau3AI | GATC | 6 cut(s) | 211, 706, 778, 955, 1405, 1411 |
| Sau96I | GGNCC | 2 cut(s) | 1234, 1276 |
| SchI | GAGTC | 5 cut(s) | 254, 467, 680, 916, 1038 |
| ScrFI | CCNGG | 2 cut(s) | 1219, 1386 |
| SexAI | ACCWGGT | 1 cut(s) | 1384 |
| SfaNI | GCATC | 6 cut(s) | 343, 556, 878, 1002, 1235, 1469 |
| SfcI | CTRYAG | 1 cut(s) | 866 |
| SinI | GGWCC | 2 cut(s) | 1234, 1276 |
| SmlI | CTYRAG | 4 cut(s) | 43, 161, 199, 625 |
| SmoI | CTYRAG | 4 cut(s) | 43, 161, 199, 625 |
| SpeI | ACTAGT | 1 cut(s) | 799 |
| SphI | GCATGC | 1 cut(s) | 160 |
| SsiI | CCGC | 4 cut(s) | 314, 1030, 1151, 1215 |
| SspI | AATATT | 1 cut(s) | 535 |
| SspMI | CTAG | 3 cut(s) | 318, 800, 1134 |
| StyD4I | CCNGG | 2 cut(s) | 1217, 1384 |
| TaaI | ACNGT | 4 cut(s) | 741, 971, 1161, 1234 |
| TaiI | ACGT | 1 cut(s) | 1077 |
| TaqI | TCGA | 4 cut(s) | 794, 837, 1118, 1229 |
| TatI | WGTACW | 2 cut(s) | 17, 86 |
| TauI | GCSGC | 3 cut(s) | 316, 1154, 1217 |
| TfiI | GAWTC | 4 cut(s) | 73, 407, 1100, 1113 |
| Tru1I | TTAA | 6 cut(s) | 8, 231, 398, 767, 966, 1398 |
| Tru9I | TTAA | 6 cut(s) | 8, 231, 398, 767, 966, 1398 |
| TscAI | CASTG | 5 cut(s) | 442, 655, 889, 1110, 1216 |
| TseFI | GTSAC | 2 cut(s) | 437, 1155 |
| TseI | GCWGC | 2 cut(s) | 377, 744 |
| Tsp45I | GTSAC | 2 cut(s) | 437, 1155 |
| TspDTI | ATGAA | 2 cut(s) | 17, 1263 |
| TspGWI | ACGGA | 1 cut(s) | 1170 |
| TspRI | CASTG | 5 cut(s) | 442, 655, 889, 1110, 1216 |
| VpaK11BI | GGWCC | 2 cut(s) | 1234, 1276 |
| XapI | RAATTY | 8 cut(s) | 4, 167, 236, 390, 603, 763, 825, 1053 |
| XceI | RCATGY | 1 cut(s) | 160 |
| XmnI | GAANNNNTTC | 1 cut(s) | 423 |
| XspI | CTAG | 3 cut(s) | 318, 800, 1134 |