TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 32 - 195 | 9e-56 | TIR domain |
| TIR_2 | PF13676 | 34 - 129 | 7.2e-14 | TIR domain |
| NB-ARC | PF00931 | 214 - 376 | 2.2e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 445 - 513 | 5.7e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_RPS2 | PF23247 | 638 - 762 | 8.8e-08 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 575, 735, 1715 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2908 |
| Acc16I | TGCGCA | 1 cut(s) | 1958 |
| Acc65I | GGTACC | 1 cut(s) | 41 |
| AccB1I | GGYRCC | 2 cut(s) | 41, 2376 |
| AccI | GTMKAC | 2 cut(s) | 360, 2892 |
| AccII | CGCG | 3 cut(s) | 130, 2404, 3015 |
| AccIII | TCCGGA | 1 cut(s) | 2680 |
| AciI | CCGC | 5 cut(s) | 2373, 2402, 2660, 3013, 3066 |
| AclI | AACGTT | 1 cut(s) | 2003 |
| AclWI | GGATC | 7 cut(s) | 377, 1271, 1637, 1925, 2121, 2265, 2323 |
| AcuI | CTGAAG | 4 cut(s) | 1203, 2907, 3111, 3138 |
| AcvI | CACGTG | 1 cut(s) | 1245 |
| AcyI | GRCGYC | 1 cut(s) | 2377 |
| AfeI | AGCGCT | 1 cut(s) | 2825 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 300, 2106, 2506, 2827, 2902 |
| AflII | CTTAAG | 2 cut(s) | 1886, 2516 |
| AflIII | ACRYGT | 2 cut(s) | 1242, 2212 |
| AjiI | CACGTC | 1 cut(s) | 2554 |
| AjnI | CCWGG | 3 cut(s) | 1546, 2588, 2755 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 973, 1005 |
| Alw21I | GWGCWC | 4 cut(s) | 1104, 1299, 1602, 2800 |
| Alw26I | GTCTC | 6 cut(s) | 627, 852, 1765, 1936, 2046, 2168 |
| Alw44I | GTGCAC | 1 cut(s) | 1598 |
| AlwI | GGATC | 7 cut(s) | 377, 1271, 1637, 1925, 2121, 2265, 2323 |
| Aor13HI | TCCGGA | 1 cut(s) | 2680 |
| Aor51HI | AGCGCT | 1 cut(s) | 2825 |
| AoxI | GGCC | 7 cut(s) | 18, 145, 199, 808, 2656, 3047, 3097 |
| ApaI | GGGCCC | 1 cut(s) | 3051 |
| ApaLI | GTGCAC | 1 cut(s) | 1598 |
| ApeKI | GCWGC | 4 cut(s) | 1838, 2223, 2433, 3063 |
| AseI | ATTAAT | 1 cut(s) | 2169 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 493, 1188, 1341, 1682, 2721 |
| Asp718I | GGTACC | 1 cut(s) | 41 |
| AspA2I | CCTAGG | 1 cut(s) | 1826 |
| AspLEI | GCGC | 6 cut(s) | 132, 230, 1959, 2379, 2700, 2826 |
| AspS9I | GGNCC | 6 cut(s) | 18, 958, 2657, 2910, 3047, 3048 |
| AsuHPI | GGTGA | 8 cut(s) | 1100, 1154, 1736, 1863, 1920, 2575, 2810, 2961 |
| AvaII | GGWCC | 2 cut(s) | 958, 2910 |
| AvrII | CCTAGG | 1 cut(s) | 1826 |
| BaeGI | GKGCMC | 2 cut(s) | 1602, 3051 |
| BanI | GGYRCC | 2 cut(s) | 41, 2376 |
| BanII | GRGCYC | 2 cut(s) | 1104, 3051 |
| BauI | CACGAG | 2 cut(s) | 1026, 2547 |
| BbrPI | CACGTG | 1 cut(s) | 1245 |
| BbsI | GAAGAC | 2 cut(s) | 473, 1694 |
| Bbv12I | GWGCWC | 4 cut(s) | 1104, 1299, 1602, 2800 |
| BbvI | GCAGC | 4 cut(s) | 1825, 2235, 2420, 3050 |
| BccI | CCATC | 8 cut(s) | 191, 394, 456, 1132, 1384, 1819, 1843, 2901 |
| BceAI | ACGGC | 4 cut(s) | 2106, 2203, 2671, 2966 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2689, 2723 |
| BciT130I | CCWGG | 3 cut(s) | 1548, 2590, 2757 |
| BciVI | GTATCC | 2 cut(s) | 118, 2915 |
| BcoDI | GTCTC | 6 cut(s) | 627, 852, 1765, 1936, 2046, 2168 |
| BfaI | CTAG | 8 cut(s) | 848, 1196, 1502, 1827, 1914, 2019, 2246, 2420 |
| BfmI | CTRYAG | 2 cut(s) | 821, 1946 |
| BfoI | RGCGCY | 2 cut(s) | 2380, 2827 |
| BfrI | CTTAAG | 2 cut(s) | 1886, 2516 |
| BfuI | GTATCC | 2 cut(s) | 118, 2915 |
| BglII | AGATCT | 1 cut(s) | 558 |
| BisI | GCNGC | 4 cut(s) | 1839, 2224, 2434, 3064 |
| BlnI | CCTAGG | 1 cut(s) | 1826 |
| BlsI | GCNGC | 4 cut(s) | 1840, 2225, 2435, 3065 |
| BmcAI | AGTACT | 1 cut(s) | 1440 |
| Bme1390I | CCNGG | 3 cut(s) | 1548, 2590, 2757 |
| Bme18I | GGWCC | 2 cut(s) | 958, 2910 |
| BmgBI | CACGTC | 1 cut(s) | 2554 |
| BmgT120I | GGNCC | 6 cut(s) | 18, 958, 2657, 2910, 3047, 3048 |
| BmiI | GGNNCC | 5 cut(s) | 19, 43, 2378, 3049, 3050 |
| BmrFI | CCNGG | 3 cut(s) | 1548, 2590, 2757 |
| BmsI | GCATC | 7 cut(s) | 900, 1243, 1303, 1479, 2413, 2889, 3045 |
| BpiI | GAAGAC | 2 cut(s) | 473, 1694 |
| BpuEI | CTTGAG | 1 cut(s) | 1829 |
| BsaAI | YACGTR | 2 cut(s) | 1226, 1245 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1053, 1584, 1821, 2814 |
| BsaHI | GRCGYC | 1 cut(s) | 2377 |
| BsaJI | CCNNGG | 2 cut(s) | 1826, 1874 |
| BsaWI | WCCGGW | 2 cut(s) | 2578, 2680 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1731, 1761, 3060, 3090 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 300, 2106, 2506, 2827, 2902 |
| Bse1I | ACTGG | 3 cut(s) | 1612, 1787, 2322 |
| Bse3DI | GCAATG | 1 cut(s) | 1996 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1053, 1584, 1821, 2814 |
| BseAI | TCCGGA | 1 cut(s) | 2680 |
| BseBI | CCWGG | 3 cut(s) | 1548, 2590, 2757 |
| BseDI | CCNNGG | 2 cut(s) | 1826, 1874 |
| BseGI | GGATG | 6 cut(s) | 467, 1412, 1494, 2735, 2912, 3097 |
| BseJI | GATNNNNATC | 4 cut(s) | 1053, 1584, 1821, 2814 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 300, 2106, 2506, 2827, 2902 |
| BseMI | GCAATG | 1 cut(s) | 1996 |
| BseMII | CTCAG | 2 cut(s) | 2625, 2945 |
| BseNI | ACTGG | 3 cut(s) | 1612, 1787, 2322 |
| BseRI | GAGGAG | 3 cut(s) | 132, 225, 2051 |
| BseSI | GKGCMC | 2 cut(s) | 1602, 3051 |
| BseXI | GCAGC | 4 cut(s) | 1825, 2235, 2420, 3050 |
| BseYI | CCCAGC | 1 cut(s) | 2826 |
| BsgI | GTGCAG | 2 cut(s) | 1824, 2242 |
| Bsh1236I | CGCG | 3 cut(s) | 130, 2404, 3015 |
| BshFI | GGCC | 7 cut(s) | 20, 147, 201, 810, 2658, 3049, 3099 |
| BshNI | GGYRCC | 2 cut(s) | 41, 2376 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1104, 1299, 1602, 2800 |
| BsiSI | CCGG | 3 cut(s) | 2535, 2579, 2681 |
| BslFI | GGGAC | 1 cut(s) | 611 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 300, 2106, 2506, 2827, 2902 |
| BsmAI | GTCTC | 6 cut(s) | 627, 852, 1765, 1936, 2046, 2168 |
| BsmFI | GGGAC | 1 cut(s) | 611 |
| BsmI | GAATGC | 1 cut(s) | 1118 |
| BsnI | GGCC | 7 cut(s) | 20, 147, 201, 810, 2658, 3049, 3099 |
| Bsp120I | GGGCCC | 1 cut(s) | 3047 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1104, 1299, 1602, 2800, 3051 |
| Bsp13I | TCCGGA | 1 cut(s) | 2680 |
| Bsp1407I | TGTACA | 1 cut(s) | 1572 |
| Bsp19I | CCATGG | 1 cut(s) | 1874 |
| BspACI | CCGC | 5 cut(s) | 2373, 2402, 2660, 3013, 3066 |
| BspANI | GGCC | 7 cut(s) | 20, 147, 201, 810, 2658, 3049, 3099 |
| BspCNI | CTCAG | 2 cut(s) | 2626, 2946 |
| BspEI | TCCGGA | 1 cut(s) | 2680 |
| BspFNI | CGCG | 3 cut(s) | 130, 2404, 3015 |
| BspHI | TCATGA | 2 cut(s) | 436, 894 |
| BspLI | GGNNCC | 5 cut(s) | 19, 43, 2378, 3049, 3050 |
| BspPI | GGATC | 7 cut(s) | 377, 1271, 1637, 1925, 2121, 2265, 2323 |
| BspQI | GCTCTTC | 1 cut(s) | 1109 |
| BspT107I | GGYRCC | 2 cut(s) | 41, 2376 |
| BspTI | CTTAAG | 2 cut(s) | 1886, 2516 |
| BsrDI | GCAATG | 1 cut(s) | 1996 |
| BsrGI | TGTACA | 1 cut(s) | 1572 |
| BsrI | ACTGG | 3 cut(s) | 1612, 1787, 2322 |
| BssECI | CCNNGG | 2 cut(s) | 1826, 1874 |
| BssNAI | GTATAC | 2 cut(s) | 361, 2893 |
| BssNI | GRCGYC | 1 cut(s) | 2377 |
| BssSI | CACGAG | 2 cut(s) | 1026, 2547 |
| BssT1I | CCWWGG | 2 cut(s) | 1826, 1874 |
| Bst1107I | GTATAC | 2 cut(s) | 361, 2893 |
| Bst2BI | CACGAG | 2 cut(s) | 1026, 2547 |
| Bst2UI | CCWGG | 3 cut(s) | 1548, 2590, 2757 |
| Bst4CI | ACNGT | 7 cut(s) | 730, 1088, 1700, 1776, 2057, 2532, 2806 |
| Bst6I | CTCTTC | 9 cut(s) | 28, 40, 67, 73, 549, 1109, 1934, 2082, 2172 |
| BstACI | GRCGYC | 1 cut(s) | 2377 |
| BstAFI | CTTAAG | 2 cut(s) | 1886, 2516 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1498 |
| BstAUI | TGTACA | 1 cut(s) | 1572 |
| BstBAI | YACGTR | 2 cut(s) | 1226, 1245 |
| BstC8I | GCNNGC | 2 cut(s) | 2375, 2660 |
| BstDEI | CTNAG | 9 cut(s) | 607, 840, 862, 931, 1281, 2032, 2117, 2634, 2954 |
| BstDSI | CCRYGG | 1 cut(s) | 1874 |
| BstEII | GGTNACC | 1 cut(s) | 2967 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2104 |
| BstF5I | GGATG | 6 cut(s) | 467, 1412, 1494, 2735, 2912, 3097 |
| BstFNI | CGCG | 3 cut(s) | 130, 2404, 3015 |
| BstH2I | RGCGCY | 2 cut(s) | 2380, 2827 |
| BstHHI | GCGC | 6 cut(s) | 132, 230, 1959, 2379, 2700, 2826 |
| BstMAI | GTCTC | 6 cut(s) | 627, 852, 1765, 1936, 2046, 2168 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1498, 2795, 3055 |
| BstNI | CCWGG | 3 cut(s) | 1548, 2590, 2757 |
| BstNSI | RCATGY | 2 cut(s) | 1359, 2216 |
| BstPI | GGTNACC | 1 cut(s) | 2967 |
| BstSCI | CCNGG | 3 cut(s) | 1546, 2588, 2755 |
| BstSFI | CTRYAG | 2 cut(s) | 821, 1946 |
| BstSLI | GKGCMC | 2 cut(s) | 1602, 3051 |
| BstUI | CGCG | 3 cut(s) | 130, 2404, 3015 |
| BstV1I | GCAGC | 4 cut(s) | 1825, 2235, 2420, 3050 |
| BstV2I | GAAGAC | 2 cut(s) | 473, 1694 |
| BstX2I | RGATCY | 6 cut(s) | 382, 558, 1276, 1917, 2113, 2257 |
| BstYI | RGATCY | 6 cut(s) | 382, 558, 1276, 1917, 2113, 2257 |
| BstZ17I | GTATAC | 2 cut(s) | 361, 2893 |
| BsuI | GTATCC | 2 cut(s) | 118, 2915 |
| BsuRI | GGCC | 7 cut(s) | 20, 147, 201, 810, 2658, 3049, 3099 |
| BtgI | CCRYGG | 1 cut(s) | 1874 |
| BtgZI | GCGATG | 2 cut(s) | 1336, 3030 |
| BtrI | CACGTC | 1 cut(s) | 2554 |
| BtsCI | GGATG | 6 cut(s) | 467, 1412, 1494, 2735, 2912, 3097 |
| BtsIMutI | CAGTG | 3 cut(s) | 1864, 2883, 3153 |
| Cac8I | GCNNGC | 2 cut(s) | 2375, 2660 |
| CciI | TCATGA | 2 cut(s) | 436, 894 |
| CfoI | GCGC | 6 cut(s) | 132, 230, 1959, 2379, 2700, 2826 |
| Cfr13I | GGNCC | 6 cut(s) | 18, 958, 2657, 2910, 3047, 3048 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 30 |
| DdeI | CTNAG | 9 cut(s) | 607, 840, 862, 931, 1281, 2032, 2117, 2634, 2954 |
| DinI | GGCGCC | 1 cut(s) | 2378 |
| DraI | TTTAAA | 4 cut(s) | 238, 630, 1366, 3007 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2908 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2908 |
| Eam1104I | CTCTTC | 9 cut(s) | 28, 40, 67, 73, 549, 1109, 1934, 2082, 2172 |
| EarI | CTCTTC | 9 cut(s) | 28, 40, 67, 73, 549, 1109, 1934, 2082, 2172 |
| Ecl136II | GAGCTC | 1 cut(s) | 1102 |
| Eco130I | CCWWGG | 2 cut(s) | 1826, 1874 |
| Eco147I | AGGCCT | 1 cut(s) | 810 |
| Eco24I | GRGCYC | 2 cut(s) | 1104, 3051 |
| Eco32I | GATATC | 1 cut(s) | 1866 |
| Eco47I | GGWCC | 2 cut(s) | 958, 2910 |
| Eco47III | AGCGCT | 1 cut(s) | 2825 |
| Eco53kI | GAGCTC | 1 cut(s) | 1102 |
| Eco57I | CTGAAG | 4 cut(s) | 1203, 2907, 3111, 3138 |
| Eco72I | CACGTG | 1 cut(s) | 1245 |
| Eco91I | GGTNACC | 1 cut(s) | 2967 |
| EcoICRI | GAGCTC | 1 cut(s) | 1102 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2104 |
| EcoO109I | RGGNCCY | 3 cut(s) | 18, 3047, 3048 |
| EcoO65I | GGTNACC | 1 cut(s) | 2967 |
| EcoRII | CCWGG | 3 cut(s) | 1546, 2588, 2755 |
| EcoRV | GATATC | 1 cut(s) | 1866 |
| EcoT14I | CCWWGG | 2 cut(s) | 1826, 1874 |
| EcoT22I | ATGCAT | 5 cut(s) | 333, 1120, 1258, 1494, 2882 |
| EcoT38I | GRGCYC | 2 cut(s) | 1104, 3051 |
| EgeI | GGCGCC | 1 cut(s) | 2378 |
| EheI | GGCGCC | 1 cut(s) | 2378 |
| ErhI | CCWWGG | 2 cut(s) | 1826, 1874 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 274, 306, 1329, 1361, 1667, 1699 |
| FaqI | GGGAC | 1 cut(s) | 611 |
| FauI | CCCGC | 3 cut(s) | 2366, 2667, 3020 |
| FauNDI | CATATG | 1 cut(s) | 636 |
| FblI | GTMKAC | 2 cut(s) | 360, 2892 |
| Fnu4HI | GCNGC | 4 cut(s) | 1839, 2224, 2434, 3064 |
| FokI | GGATG | 6 cut(s) | 474, 1419, 1501, 2742, 2919, 3104 |
| FriOI | GRGCYC | 2 cut(s) | 1104, 3051 |
| Fsp4HI | GCNGC | 4 cut(s) | 1839, 2224, 2434, 3064 |
| FspBI | CTAG | 8 cut(s) | 848, 1196, 1502, 1827, 1914, 2019, 2246, 2420 |
| FspI | TGCGCA | 1 cut(s) | 1958 |
| GlaI | GCGC | 6 cut(s) | 131, 229, 1958, 2378, 2699, 2825 |
| GluI | GCNGC | 4 cut(s) | 1839, 2224, 2434, 3064 |
| GsaI | CCCAGC | 1 cut(s) | 2830 |
| HaeII | RGCGCY | 2 cut(s) | 2380, 2827 |
| HaeIII | GGCC | 7 cut(s) | 20, 147, 201, 810, 2658, 3049, 3099 |
| HapII | CCGG | 3 cut(s) | 2535, 2579, 2681 |
| HhaI | GCGC | 6 cut(s) | 132, 230, 1959, 2379, 2700, 2826 |
| Hin1I | GRCGYC | 1 cut(s) | 2377 |
| Hin6I | GCGC | 6 cut(s) | 130, 228, 1957, 2377, 2698, 2824 |
| HinP1I | GCGC | 6 cut(s) | 130, 228, 1957, 2377, 2698, 2824 |
| HincII | GTYRAC | 3 cut(s) | 2184, 2595, 2869 |
| HindII | GTYRAC | 3 cut(s) | 2184, 2595, 2869 |
| HindIII | AAGCTT | 3 cut(s) | 644, 1092, 1681 |
| HpaI | GTTAAC | 2 cut(s) | 2184, 2869 |
| HpaII | CCGG | 3 cut(s) | 2535, 2579, 2681 |
| HphI | GGTGA | 8 cut(s) | 1100, 1154, 1736, 1863, 1920, 2575, 2810, 2961 |
| HpyCH4III | ACNGT | 7 cut(s) | 730, 1088, 1700, 1776, 2057, 2532, 2806 |
| HpyCH4IV | ACGT | 9 cut(s) | 1225, 1244, 1555, 1590, 1903, 2003, 2553, 2865, 3075 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1498, 2795, 3055 |
| HpyF3I | CTNAG | 9 cut(s) | 607, 840, 862, 931, 1281, 2032, 2117, 2634, 2954 |
| HpySE526I | ACGT | 9 cut(s) | 1225, 1244, 1555, 1590, 1903, 2003, 2553, 2865, 3075 |
| Hsp92I | GRCGYC | 1 cut(s) | 2377 |
| HspAI | GCGC | 6 cut(s) | 130, 228, 1957, 2377, 2698, 2824 |
| KasI | GGCGCC | 1 cut(s) | 2376 |
| Kpn2I | TCCGGA | 1 cut(s) | 2680 |
| KpnI | GGTACC | 1 cut(s) | 45 |
| KspAI | GTTAAC | 2 cut(s) | 2184, 2869 |
| LguI | GCTCTTC | 1 cut(s) | 1109 |
| LmnI | GCTCC | 2 cut(s) | 1099, 2350 |
| Lsp1109I | GCAGC | 4 cut(s) | 1825, 2235, 2420, 3050 |
| LweI | GCATC | 7 cut(s) | 900, 1243, 1303, 1479, 2413, 2889, 3045 |
| MaeI | CTAG | 8 cut(s) | 848, 1196, 1502, 1827, 1914, 2019, 2246, 2420 |
| MaeII | ACGT | 9 cut(s) | 1225, 1244, 1555, 1590, 1903, 2003, 2553, 2865, 3075 |
| MaeIII | GTNAC | 8 cut(s) | 1082, 1409, 1797, 2281, 2549, 2854, 2967, 3138 |
| MfeI | CAATTG | 3 cut(s) | 243, 717, 2368 |
| MflI | RGATCY | 6 cut(s) | 382, 558, 1276, 1917, 2113, 2257 |
| MhlI | GDGCHC | 5 cut(s) | 1104, 1299, 1602, 2800, 3051 |
| Mly113I | GGCGCC | 1 cut(s) | 2377 |
| MlyI | GAGTC | 7 cut(s) | 260, 629, 838, 1271, 1544, 2495, 3078 |
| MmeI | TCCRAC | 5 cut(s) | 592, 637, 958, 2091, 2315 |
| Mph1103I | ATGCAT | 5 cut(s) | 333, 1120, 1258, 1494, 2882 |
| MroI | TCCGGA | 1 cut(s) | 2680 |
| MroXI | GAANNNNTTC | 5 cut(s) | 493, 1188, 1341, 1682, 2721 |
| MslI | CAYNNNNRTG | 2 cut(s) | 336, 1873 |
| MspCI | CTTAAG | 2 cut(s) | 1886, 2516 |
| MspI | CCGG | 3 cut(s) | 2535, 2579, 2681 |
| MspR9I | CCNGG | 3 cut(s) | 1548, 2590, 2757 |
| MunI | CAATTG | 3 cut(s) | 243, 717, 2368 |
| Mva1269I | GAATGC | 1 cut(s) | 1118 |
| MvaI | CCWGG | 3 cut(s) | 1548, 2590, 2757 |
| MvnI | CGCG | 3 cut(s) | 130, 2404, 3015 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1498, 2795, 3055 |
| NarI | GGCGCC | 1 cut(s) | 2377 |
| NcoI | CCATGG | 1 cut(s) | 1874 |
| NdeI | CATATG | 1 cut(s) | 636 |
| NlaIV | GGNNCC | 5 cut(s) | 19, 43, 2378, 3049, 3050 |
| NmuCI | GTSAC | 5 cut(s) | 1082, 1409, 2549, 2854, 2967 |
| NsbI | TGCGCA | 1 cut(s) | 1958 |
| NsiI | ATGCAT | 5 cut(s) | 333, 1120, 1258, 1494, 2882 |
| NspI | RCATGY | 2 cut(s) | 1359, 2216 |
| PagI | TCATGA | 2 cut(s) | 436, 894 |
| PceI | AGGCCT | 1 cut(s) | 810 |
| PciI | ACATGT | 1 cut(s) | 2212 |
| PciSI | GCTCTTC | 1 cut(s) | 1109 |
| PctI | GAATGC | 1 cut(s) | 1118 |
| PdmI | GAANNNNTTC | 5 cut(s) | 493, 1188, 1341, 1682, 2721 |
| PfeI | GAWTC | 3 cut(s) | 341, 527, 2677 |
| PfoI | TCCNGGA | 1 cut(s) | 2755 |
| PkrI | GCNGC | 4 cut(s) | 1840, 2225, 2435, 3065 |
| PleI | GAGTC | 7 cut(s) | 259, 628, 838, 1270, 1543, 2494, 3077 |
| PluTI | GGCGCC | 1 cut(s) | 2380 |
| PmaCI | CACGTG | 1 cut(s) | 1245 |
| PmlI | CACGTG | 1 cut(s) | 1245 |
| PpsI | GAGTC | 7 cut(s) | 259, 628, 838, 1270, 1543, 2494, 3077 |
| Ppu21I | YACGTR | 2 cut(s) | 1226, 1245 |
| PscI | ACATGT | 1 cut(s) | 2212 |
| PshBI | ATTAAT | 1 cut(s) | 2169 |
| PsiI | TTATAA | 3 cut(s) | 575, 735, 1715 |
| Psp124BI | GAGCTC | 1 cut(s) | 1104 |
| Psp1406I | AACGTT | 1 cut(s) | 2003 |
| Psp6I | CCWGG | 3 cut(s) | 1546, 2588, 2755 |
| PspCI | CACGTG | 1 cut(s) | 1245 |
| PspEI | GGTNACC | 1 cut(s) | 2967 |
| PspFI | CCCAGC | 1 cut(s) | 2826 |
| PspGI | CCWGG | 3 cut(s) | 1546, 2588, 2755 |
| PspN4I | GGNNCC | 5 cut(s) | 19, 43, 2378, 3049, 3050 |
| PspOMI | GGGCCC | 1 cut(s) | 3047 |
| PspPI | GGNCC | 6 cut(s) | 18, 958, 2657, 2910, 3047, 3048 |
| PsuI | RGATCY | 6 cut(s) | 382, 558, 1276, 1917, 2113, 2257 |
| RseI | CAYNNNNRTG | 2 cut(s) | 336, 1873 |
| SacI | GAGCTC | 1 cut(s) | 1104 |
| SapI | GCTCTTC | 1 cut(s) | 1109 |
| SatI | GCNGC | 4 cut(s) | 1839, 2224, 2434, 3064 |
| Sau96I | GGNCC | 6 cut(s) | 18, 958, 2657, 2910, 3047, 3048 |
| ScaI | AGTACT | 1 cut(s) | 1440 |
| SchI | GAGTC | 7 cut(s) | 260, 629, 838, 1271, 1544, 2495, 3078 |
| ScrFI | CCNGG | 3 cut(s) | 1548, 2590, 2757 |
| SduI | GDGCHC | 5 cut(s) | 1104, 1299, 1602, 2800, 3051 |
| SfaNI | GCATC | 7 cut(s) | 900, 1243, 1303, 1479, 2413, 2889, 3045 |
| SfcI | CTRYAG | 2 cut(s) | 821, 1946 |
| SfoI | GGCGCC | 1 cut(s) | 2378 |
| SinI | GGWCC | 2 cut(s) | 958, 2910 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 336, 1873 |
| SmlI | CTYRAG | 3 cut(s) | 1844, 1886, 2516 |
| SmoI | CTYRAG | 3 cut(s) | 1844, 1886, 2516 |
| SseBI | AGGCCT | 1 cut(s) | 810 |
| SsiI | CCGC | 5 cut(s) | 2373, 2402, 2660, 3013, 3066 |
| SspDI | GGCGCC | 1 cut(s) | 2376 |
| SspI | AATATT | 3 cut(s) | 909, 1805, 2470 |
| SspMI | CTAG | 8 cut(s) | 848, 1196, 1502, 1827, 1914, 2019, 2246, 2420 |
| SstI | GAGCTC | 1 cut(s) | 1104 |
| StuI | AGGCCT | 1 cut(s) | 810 |
| StyD4I | CCNGG | 3 cut(s) | 1546, 2588, 2755 |
| StyI | CCWWGG | 2 cut(s) | 1826, 1874 |
| TaaI | ACNGT | 7 cut(s) | 730, 1088, 1700, 1776, 2057, 2532, 2806 |
| TaiI | ACGT | 9 cut(s) | 1228, 1247, 1558, 1593, 1906, 2006, 2556, 2868, 3078 |
| TaqI | TCGA | 6 cut(s) | 344, 1328, 1974, 2318, 2709, 2934 |
| TatI | WGTACW | 3 cut(s) | 1438, 1572, 1882 |
| TfiI | GAWTC | 3 cut(s) | 341, 527, 2677 |
| TscAI | CASTG | 3 cut(s) | 1864, 2890, 3153 |
| TseFI | GTSAC | 5 cut(s) | 1082, 1409, 2549, 2854, 2967 |
| TseI | GCWGC | 4 cut(s) | 1838, 2223, 2433, 3063 |
| Tsp45I | GTSAC | 5 cut(s) | 1082, 1409, 2549, 2854, 2967 |
| TspGWI | ACGGA | 4 cut(s) | 531, 1253, 2902, 2971 |
| TspRI | CASTG | 3 cut(s) | 1864, 2890, 3153 |
| Vha464I | CTTAAG | 2 cut(s) | 1886, 2516 |
| VneI | GTGCAC | 1 cut(s) | 1598 |
| VpaK11BI | GGWCC | 2 cut(s) | 958, 2910 |
| VspI | ATTAAT | 1 cut(s) | 2169 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2104 |
| XbaI | TCTAGA | 2 cut(s) | 2018, 2245 |
| XceI | RCATGY | 2 cut(s) | 1359, 2216 |
| XmaJI | CCTAGG | 1 cut(s) | 1826 |
| XmiI | GTMKAC | 2 cut(s) | 360, 2892 |
| XmnI | GAANNNNTTC | 5 cut(s) | 493, 1188, 1341, 1682, 2721 |
| XspI | CTAG | 8 cut(s) | 848, 1196, 1502, 1827, 1914, 2019, 2246, 2420 |
| ZrmI | AGTACT | 1 cut(s) | 1440 |
| Zsp2I | ATGCAT | 5 cut(s) | 333, 1120, 1258, 1494, 2882 |