TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 19 - 189 | 1.4e-53 | TIR domain |
| TIR_2 | PF13676 | 22 - 117 | 2.1e-16 | TIR domain |
| NB-ARC | PF00931 | 204 - 369 | 2.3e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 437 - 506 | 2.2e-11 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 685 - 790 | 2e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 783 - 839 | 5.6e-13 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 830 - 888 | 7.5e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 885 - 961 | 1.2e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 1003 - 1099 | 1.9e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 711 |
| Acc36I | ACCTGC | 1 cut(s) | 1533 |
| Acc65I | GGTACC | 2 cut(s) | 374, 1658 |
| AccB1I | GGYRCC | 2 cut(s) | 374, 1658 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1057, 3343 |
| AccI | GTMKAC | 1 cut(s) | 2594 |
| AccII | CGCG | 1 cut(s) | 3662 |
| AciI | CCGC | 6 cut(s) | 1364, 2828, 2991, 3132, 3660, 3921 |
| AclI | AACGTT | 2 cut(s) | 1954, 2788 |
| AclWI | GGATC | 3 cut(s) | 341, 1968, 3807 |
| AcoI | YGGCCR | 2 cut(s) | 573, 843 |
| AcsI | RAATTY | 7 cut(s) | 410, 562, 728, 766, 1978, 3035, 3889 |
| AcuI | CTGAAG | 2 cut(s) | 364, 2606 |
| AdeI | CACNNNGTG | 1 cut(s) | 2933 |
| AfaI | GTAC | 8 cut(s) | 59, 376, 1368, 1495, 1660, 3450, 3506, 3658 |
| AfeI | AGCGCT | 1 cut(s) | 2917 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 51, 264, 1057, 1117, 1174, 2003, 2890, 3015, 3343 |
| AflII | CTTAAG | 1 cut(s) | 2123 |
| AflIII | ACRYGT | 1 cut(s) | 2451 |
| AjiI | CACGTC | 1 cut(s) | 2452 |
| AjnI | CCWGG | 8 cut(s) | 1050, 1528, 3234, 3301, 3463, 3520, 3850, 3882 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3696, 3728 |
| AleI | CACNNNNGTG | 1 cut(s) | 3512 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 630, 662, 3459, 3491 |
| Alw21I | GWGCWC | 4 cut(s) | 216, 1137, 1422, 3086 |
| Alw26I | GTCTC | 5 cut(s) | 2051, 2432, 2708, 3055, 3464 |
| AlwI | GGATC | 3 cut(s) | 341, 1968, 3807 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3053 |
| Ama87I | CYCGRG | 3 cut(s) | 1076, 3008, 3454 |
| Aor51HI | AGCGCT | 1 cut(s) | 2917 |
| AoxI | GGCC | 9 cut(s) | 109, 479, 573, 843, 1112, 1165, 1431, 1763, 3950 |
| ApeKI | GCWGC | 6 cut(s) | 461, 1232, 1313, 2848, 3696, 3966 |
| ApoI | RAATTY | 7 cut(s) | 410, 562, 728, 766, 1978, 3035, 3889 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 774, 806, 3033, 3065 |
| AseI | ATTAAT | 1 cut(s) | 1037 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2943 |
| Asp718I | GGTACC | 2 cut(s) | 374, 1658 |
| AspA2I | CCTAGG | 1 cut(s) | 3569 |
| AspLEI | GCGC | 1 cut(s) | 2918 |
| AspS9I | GGNCC | 3 cut(s) | 1048, 1432, 3848 |
| AsuHPI | GGTGA | 8 cut(s) | 16, 95, 136, 1358, 1509, 2919, 3872, 3935 |
| AsuII | TTCGAA | 2 cut(s) | 1248, 3719 |
| AsuNHI | GCTAGC | 1 cut(s) | 1480 |
| AvaI | CYCGRG | 3 cut(s) | 1076, 3008, 3454 |
| AvaII | GGWCC | 2 cut(s) | 1048, 3848 |
| AvrII | CCTAGG | 1 cut(s) | 3569 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 358, 391 |
| BalI | TGGCCA | 2 cut(s) | 575, 845 |
| BanI | GGYRCC | 2 cut(s) | 374, 1658 |
| BanII | GRGCYC | 2 cut(s) | 216, 1137 |
| BauI | CACGAG | 1 cut(s) | 600 |
| BbsI | GAAGAC | 2 cut(s) | 3119, 3933 |
| Bbv12I | GWGCWC | 4 cut(s) | 216, 1137, 1422, 3086 |
| BbvI | GCAGC | 6 cut(s) | 473, 1219, 1325, 2835, 3708, 3978 |
| BceAI | ACGGC | 3 cut(s) | 1239, 1286, 3430 |
| BciT130I | CCWGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| BciVI | GTATCC | 2 cut(s) | 82, 1442 |
| BclI | TGATCA | 5 cut(s) | 6, 160, 870, 1063, 3558 |
| BcoDI | GTCTC | 5 cut(s) | 2051, 2432, 2708, 3055, 3464 |
| BfmI | CTRYAG | 1 cut(s) | 3999 |
| BfoI | RGCGCY | 1 cut(s) | 2919 |
| BfrI | CTTAAG | 1 cut(s) | 2123 |
| BfuAI | ACCTGC | 1 cut(s) | 1533 |
| BfuI | GTATCC | 2 cut(s) | 82, 1442 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 851 |
| BglII | AGATCT | 1 cut(s) | 2770 |
| BisI | GCNGC | 7 cut(s) | 462, 1233, 1314, 2828, 2849, 3697, 3967 |
| BlnI | CCTAGG | 1 cut(s) | 3569 |
| BlpI | GCTNAGC | 2 cut(s) | 396, 3418 |
| BlsI | GCNGC | 7 cut(s) | 463, 1234, 1315, 2829, 2850, 3698, 3968 |
| Bme1390I | CCNGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| Bme18I | GGWCC | 2 cut(s) | 1048, 3848 |
| BmeT110I | CYCGRG | 3 cut(s) | 1076, 3008, 3454 |
| BmgBI | CACGTC | 1 cut(s) | 2452 |
| BmgT120I | GGNCC | 3 cut(s) | 1048, 1432, 3848 |
| BmiI | GGNNCC | 2 cut(s) | 376, 1660 |
| BmrFI | CCNGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| BmrI | ACTGGG | 1 cut(s) | 578 |
| BmtI | GCTAGC | 1 cut(s) | 1484 |
| BmuI | ACTGGG | 1 cut(s) | 578 |
| BpiI | GAAGAC | 2 cut(s) | 3119, 3933 |
| BpmI | CTGGAG | 3 cut(s) | 1740, 3285, 3660 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 396, 3418 |
| Bpu14I | TTCGAA | 2 cut(s) | 1248, 3719 |
| BpuEI | CTTGAG | 4 cut(s) | 1146, 1768, 1847, 2075 |
| Bsa29I | ATCGAT | 2 cut(s) | 2417, 2624 |
| BsaAI | YACGTR | 2 cut(s) | 3770, 3828 |
| BsaBI | GATNNNNATC | 3 cut(s) | 227, 2410, 3563 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3984, 4014 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 51, 264, 1057, 1117, 1174, 2003, 2890, 3015, 3343 |
| Bse118I | RCCGGY | 1 cut(s) | 1110 |
| Bse1I | ACTGG | 8 cut(s) | 329, 507, 584, 676, 2895, 3348, 3443, 3643 |
| Bse3DI | GCAATG | 4 cut(s) | 1219, 1326, 2973, 4029 |
| Bse8I | GATNNNNATC | 3 cut(s) | 227, 2410, 3563 |
| BseBI | CCWGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| BseCI | ATCGAT | 2 cut(s) | 2417, 2624 |
| BseJI | GATNNNNATC | 3 cut(s) | 227, 2410, 3563 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 51, 264, 1057, 1117, 1174, 2003, 2890, 3015, 3343 |
| BseMI | GCAATG | 4 cut(s) | 1219, 1326, 2973, 4029 |
| BseMII | CTCAG | 6 cut(s) | 62, 1007, 2413, 3216, 3525, 4051 |
| BseNI | ACTGG | 8 cut(s) | 329, 507, 584, 676, 2895, 3348, 3443, 3643 |
| BseRI | GAGGAG | 1 cut(s) | 2387 |
| BseXI | GCAGC | 6 cut(s) | 473, 1219, 1325, 2835, 3708, 3978 |
| BseYI | CCCAGC | 1 cut(s) | 400 |
| BsgI | GTGCAG | 3 cut(s) | 452, 1167, 2955 |
| Bsh1236I | CGCG | 1 cut(s) | 3662 |
| BshFI | GGCC | 9 cut(s) | 111, 481, 575, 845, 1114, 1167, 1433, 1765, 3952 |
| BshNI | GGYRCC | 2 cut(s) | 374, 1658 |
| BshVI | ATCGAT | 2 cut(s) | 2417, 2624 |
| BsiHKAI | GWGCWC | 4 cut(s) | 216, 1137, 1422, 3086 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1076, 3008, 3454 |
| BsiSI | CCGG | 1 cut(s) | 1111 |
| BslFI | GGGAC | 4 cut(s) | 417, 682, 1907, 3739 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 51, 264, 1057, 1117, 1174, 2003, 2890, 3015, 3343 |
| BsmAI | GTCTC | 5 cut(s) | 2051, 2432, 2708, 3055, 3464 |
| BsmFI | GGGAC | 4 cut(s) | 417, 682, 1907, 3739 |
| BsmI | GAATGC | 2 cut(s) | 451, 1099 |
| BsnI | GGCC | 9 cut(s) | 111, 481, 575, 845, 1114, 1167, 1433, 1765, 3952 |
| BsoBI | CYCGRG | 3 cut(s) | 1076, 3008, 3454 |
| Bsp119I | TTCGAA | 2 cut(s) | 1248, 3719 |
| Bsp1286I | GDGCHC | 4 cut(s) | 216, 1137, 1422, 3086 |
| Bsp1407I | TGTACA | 1 cut(s) | 3504 |
| Bsp143I | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 396, 3418 |
| Bsp19I | CCATGG | 1 cut(s) | 50 |
| BspACI | CCGC | 6 cut(s) | 1364, 2828, 2991, 3132, 3660, 3921 |
| BspANI | GGCC | 9 cut(s) | 111, 481, 575, 845, 1114, 1167, 1433, 1765, 3952 |
| BspCNI | CTCAG | 6 cut(s) | 63, 1008, 2412, 3215, 3526, 4050 |
| BspDI | ATCGAT | 2 cut(s) | 2417, 2624 |
| BspFNI | CGCG | 1 cut(s) | 3662 |
| BspHI | TCATGA | 3 cut(s) | 1066, 1555, 3526 |
| BspLI | GGNNCC | 2 cut(s) | 376, 1660 |
| BspMI | ACCTGC | 1 cut(s) | 1533 |
| BspOI | GCTAGC | 1 cut(s) | 1484 |
| BspPI | GGATC | 3 cut(s) | 341, 1968, 3807 |
| BspQI | GCTCTTC | 1 cut(s) | 1201 |
| BspT104I | TTCGAA | 2 cut(s) | 1248, 3719 |
| BspT107I | GGYRCC | 2 cut(s) | 374, 1658 |
| BspTI | CTTAAG | 1 cut(s) | 2123 |
| BsrDI | GCAATG | 4 cut(s) | 1219, 1326, 2973, 4029 |
| BsrFI | RCCGGY | 1 cut(s) | 1110 |
| BsrGI | TGTACA | 1 cut(s) | 3504 |
| BsrI | ACTGG | 8 cut(s) | 329, 507, 584, 676, 2895, 3348, 3443, 3643 |
| BssAI | RCCGGY | 1 cut(s) | 1110 |
| BssMI | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| BssSI | CACGAG | 1 cut(s) | 600 |
| BssT1I | CCWWGG | 7 cut(s) | 50, 1384, 2117, 2229, 2298, 2436, 3569 |
| Bst2BI | CACGAG | 1 cut(s) | 600 |
| Bst2UI | CCWGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| Bst4CI | ACNGT | 9 cut(s) | 122, 936, 1186, 1571, 1703, 1772, 1846, 3077, 3687 |
| Bst6I | CTCTTC | 3 cut(s) | 28, 634, 1201 |
| BstAFI | CTTAAG | 1 cut(s) | 2123 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1477 |
| BstAUI | TGTACA | 1 cut(s) | 3504 |
| BstBAI | YACGTR | 2 cut(s) | 3770, 3828 |
| BstBI | TTCGAA | 2 cut(s) | 1248, 3719 |
| BstC8I | GCNNGC | 7 cut(s) | 1112, 1230, 1482, 2914, 3136, 3919, 4029 |
| BstDSI | CCRYGG | 1 cut(s) | 50 |
| BstFNI | CGCG | 1 cut(s) | 3662 |
| BstH2I | RGCGCY | 1 cut(s) | 2919 |
| BstHHI | GCGC | 1 cut(s) | 2918 |
| BstKTI | GATC | 9 cut(s) | 9, 163, 349, 873, 1066, 1963, 2773, 3561, 3802 |
| BstMAI | GTCTC | 5 cut(s) | 2051, 2432, 2708, 3055, 3464 |
| BstMBI | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 851, 1477, 2913, 3705, 3963, 4028 |
| BstNI | CCWGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| BstNSI | RCATGY | 6 cut(s) | 1335, 1364, 1400, 1678, 3138, 3921 |
| BstSCI | CCNGG | 8 cut(s) | 1050, 1528, 3234, 3301, 3463, 3520, 3850, 3882 |
| BstSFI | CTRYAG | 1 cut(s) | 3999 |
| BstUI | CGCG | 1 cut(s) | 3662 |
| BstV1I | GCAGC | 6 cut(s) | 473, 1219, 1325, 2835, 3708, 3978 |
| BstV2I | GAAGAC | 2 cut(s) | 3119, 3933 |
| BstX2I | RGATCY | 2 cut(s) | 1960, 2770 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 154 |
| BstYI | RGATCY | 2 cut(s) | 1960, 2770 |
| Bsu15I | ATCGAT | 2 cut(s) | 2417, 2624 |
| BsuI | GTATCC | 2 cut(s) | 82, 1442 |
| BsuRI | GGCC | 9 cut(s) | 111, 481, 575, 845, 1114, 1167, 1433, 1765, 3952 |
| BsuTUI | ATCGAT | 2 cut(s) | 2417, 2624 |
| BtgI | CCRYGG | 1 cut(s) | 50 |
| BtrI | CACGTC | 1 cut(s) | 2452 |
| BtsI | GCAGTG | 2 cut(s) | 1155, 3706 |
| BtsIMutI | CAGTG | 5 cut(s) | 127, 514, 1155, 2795, 3706 |
| BveI | ACCTGC | 1 cut(s) | 1533 |
| Cac8I | GCNNGC | 7 cut(s) | 1112, 1230, 1482, 2914, 3136, 3919, 4029 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3053 |
| CciI | TCATGA | 3 cut(s) | 1066, 1555, 3526 |
| CfoI | GCGC | 1 cut(s) | 2918 |
| Cfr10I | RCCGGY | 1 cut(s) | 1110 |
| Cfr13I | GGNCC | 3 cut(s) | 1048, 1432, 3848 |
| ClaI | ATCGAT | 2 cut(s) | 2417, 2624 |
| CseI | GACGC | 4 cut(s) | 414, 1719, 2304, 2735 |
| Csp6I | GTAC | 8 cut(s) | 58, 375, 1367, 1494, 1659, 3449, 3505, 3657 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 822, 857 |
| CviQI | GTAC | 8 cut(s) | 58, 375, 1367, 1494, 1659, 3449, 3505, 3657 |
| DpnI | GATC | 9 cut(s) | 8, 162, 348, 872, 1065, 1962, 2772, 3560, 3801 |
| DpnII | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| DraI | TTTAAA | 4 cut(s) | 1102, 2527, 2970, 3619 |
| DraIII | CACNNNGTG | 1 cut(s) | 2933 |
| EaeI | YGGCCR | 2 cut(s) | 573, 843 |
| Eam1104I | CTCTTC | 3 cut(s) | 28, 634, 1201 |
| EarI | CTCTTC | 3 cut(s) | 28, 634, 1201 |
| Ecl136II | GAGCTC | 2 cut(s) | 214, 1135 |
| Eco130I | CCWWGG | 7 cut(s) | 50, 1384, 2117, 2229, 2298, 2436, 3569 |
| Eco147I | AGGCCT | 1 cut(s) | 1167 |
| Eco24I | GRGCYC | 2 cut(s) | 216, 1137 |
| Eco32I | GATATC | 1 cut(s) | 1877 |
| Eco47I | GGWCC | 2 cut(s) | 1048, 3848 |
| Eco47III | AGCGCT | 1 cut(s) | 2917 |
| Eco53kI | GAGCTC | 2 cut(s) | 214, 1135 |
| Eco57I | CTGAAG | 2 cut(s) | 364, 2606 |
| Eco88I | CYCGRG | 3 cut(s) | 1076, 3008, 3454 |
| EcoICRI | GAGCTC | 2 cut(s) | 214, 1135 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1432 |
| EcoRI | GAATTC | 2 cut(s) | 766, 3035 |
| EcoRII | CCWGG | 8 cut(s) | 1050, 1528, 3234, 3301, 3463, 3520, 3850, 3882 |
| EcoRV | GATATC | 1 cut(s) | 1877 |
| EcoT14I | CCWWGG | 7 cut(s) | 50, 1384, 2117, 2229, 2298, 2436, 3569 |
| EcoT22I | ATGCAT | 2 cut(s) | 256, 3140 |
| EcoT38I | GRGCYC | 2 cut(s) | 216, 1137 |
| ErhI | CCWWGG | 7 cut(s) | 50, 1384, 2117, 2229, 2298, 2436, 3569 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 254, 286, 1099, 1131 |
| FaqI | GGGAC | 4 cut(s) | 417, 682, 1907, 3739 |
| FauI | CCCGC | 1 cut(s) | 3139 |
| FauNDI | CATATG | 1 cut(s) | 651 |
| FbaI | TGATCA | 5 cut(s) | 6, 160, 870, 1063, 3558 |
| FblI | GTMKAC | 1 cut(s) | 2594 |
| Fnu4HI | GCNGC | 7 cut(s) | 462, 1233, 1314, 2828, 2849, 3697, 3967 |
| FriOI | GRGCYC | 2 cut(s) | 216, 1137 |
| Fsp4HI | GCNGC | 7 cut(s) | 462, 1233, 1314, 2828, 2849, 3697, 3967 |
| GlaI | GCGC | 1 cut(s) | 2917 |
| GluI | GCNGC | 7 cut(s) | 462, 1233, 1314, 2828, 2849, 3697, 3967 |
| GsaI | CCCAGC | 1 cut(s) | 404 |
| GsuI | CTGGAG | 3 cut(s) | 1740, 3285, 3660 |
| HaeII | RGCGCY | 1 cut(s) | 2919 |
| HaeIII | GGCC | 9 cut(s) | 111, 481, 575, 845, 1114, 1167, 1433, 1765, 3952 |
| HapII | CCGG | 1 cut(s) | 1111 |
| HgaI | GACGC | 4 cut(s) | 414, 1719, 2304, 2735 |
| HhaI | GCGC | 1 cut(s) | 2918 |
| Hin6I | GCGC | 1 cut(s) | 2916 |
| HinP1I | GCGC | 1 cut(s) | 2916 |
| HincII | GTYRAC | 2 cut(s) | 1907, 2292 |
| HindII | GTYRAC | 2 cut(s) | 1907, 2292 |
| HindIII | AAGCTT | 3 cut(s) | 620, 2235, 3188 |
| HpaI | GTTAAC | 1 cut(s) | 2292 |
| HpaII | CCGG | 1 cut(s) | 1111 |
| HphI | GGTGA | 8 cut(s) | 16, 95, 136, 1358, 1509, 2919, 3872, 3935 |
| Hpy99I | CGWCG | 1 cut(s) | 3983 |
| HpyCH4III | ACNGT | 9 cut(s) | 122, 936, 1186, 1571, 1703, 1772, 1846, 3077, 3687 |
| HpyCH4IV | ACGT | 9 cut(s) | 130, 172, 1144, 1954, 2451, 2788, 3025, 3769, 3827 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 851, 1477, 2913, 3705, 3963, 4028 |
| HpySE526I | ACGT | 9 cut(s) | 130, 172, 1144, 1954, 2451, 2788, 3025, 3769, 3827 |
| HspAI | GCGC | 1 cut(s) | 2916 |
| KpnI | GGTACC | 2 cut(s) | 378, 1662 |
| KroI | GCCGGC | 1 cut(s) | 1110 |
| KroNI | GCCGGC | 1 cut(s) | 1112 |
| Ksp22I | TGATCA | 5 cut(s) | 6, 160, 870, 1063, 3558 |
| KspAI | GTTAAC | 1 cut(s) | 2292 |
| Kzo9I | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| LguI | GCTCTTC | 1 cut(s) | 1201 |
| LmnI | GCTCC | 5 cut(s) | 503, 1621, 2095, 3784, 3864 |
| Lsp1109I | GCAGC | 6 cut(s) | 473, 1219, 1325, 2835, 3708, 3978 |
| MaeII | ACGT | 9 cut(s) | 130, 172, 1144, 1954, 2451, 2788, 3025, 3769, 3827 |
| MaeIII | GTNAC | 5 cut(s) | 776, 923, 1283, 1515, 2893 |
| MalI | GATC | 9 cut(s) | 8, 162, 348, 872, 1065, 1962, 2772, 3560, 3801 |
| MboI | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| MfeI | CAATTG | 9 cut(s) | 207, 693, 717, 1010, 2041, 2267, 2280, 2487, 2694 |
| MflI | RGATCY | 2 cut(s) | 1960, 2770 |
| MhlI | GDGCHC | 4 cut(s) | 216, 1137, 1422, 3086 |
| MlsI | TGGCCA | 2 cut(s) | 575, 845 |
| MluNI | TGGCCA | 2 cut(s) | 575, 845 |
| MlyI | GAGTC | 7 cut(s) | 1523, 1731, 1843, 1854, 2434, 2527, 3466 |
| MmeI | TCCRAC | 9 cut(s) | 1695, 1984, 2060, 2230, 2427, 2984, 3138, 3234, 3354 |
| Mox20I | TGGCCA | 2 cut(s) | 575, 845 |
| Mph1103I | ATGCAT | 2 cut(s) | 256, 3140 |
| MroNI | GCCGGC | 1 cut(s) | 1110 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2943 |
| MscI | TGGCCA | 2 cut(s) | 575, 845 |
| MslI | CAYNNNNRTG | 9 cut(s) | 152, 1401, 1415, 1466, 1560, 1616, 1847, 3512, 3747 |
| Msp20I | TGGCCA | 2 cut(s) | 575, 845 |
| MspA1I | CMGCKG | 1 cut(s) | 3845 |
| MspCI | CTTAAG | 1 cut(s) | 2123 |
| MspI | CCGG | 1 cut(s) | 1111 |
| MspR9I | CCNGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| MunI | CAATTG | 9 cut(s) | 207, 693, 717, 1010, 2041, 2267, 2280, 2487, 2694 |
| Mva1269I | GAATGC | 2 cut(s) | 451, 1099 |
| MvaI | CCWGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| MvnI | CGCG | 1 cut(s) | 3662 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 851, 1477, 2913, 3705, 3963, 4028 |
| NaeI | GCCGGC | 1 cut(s) | 1112 |
| NcoI | CCATGG | 1 cut(s) | 50 |
| NdeI | CATATG | 1 cut(s) | 651 |
| NdeII | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| NgoMIV | GCCGGC | 1 cut(s) | 1110 |
| NheI | GCTAGC | 1 cut(s) | 1480 |
| NlaIV | GGNNCC | 2 cut(s) | 376, 1660 |
| NmeAIII | GCCGAG | 1 cut(s) | 3978 |
| NmuCI | GTSAC | 2 cut(s) | 923, 1515 |
| NsiI | ATGCAT | 2 cut(s) | 256, 3140 |
| NspI | RCATGY | 6 cut(s) | 1335, 1364, 1400, 1678, 3138, 3921 |
| NspV | TTCGAA | 2 cut(s) | 1248, 3719 |
| OliI | CACNNNNGTG | 1 cut(s) | 3512 |
| PaeI | GCATGC | 2 cut(s) | 3138, 3921 |
| PaeR7I | CTCGAG | 1 cut(s) | 1076 |
| PagI | TCATGA | 3 cut(s) | 1066, 1555, 3526 |
| PceI | AGGCCT | 1 cut(s) | 1167 |
| PciSI | GCTCTTC | 1 cut(s) | 1201 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 786, 1150, 2785, 3808 |
| PctI | GAATGC | 2 cut(s) | 451, 1099 |
| PdiI | GCCGGC | 1 cut(s) | 1112 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2943 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1057, 3343 |
| PfoI | TCCNGGA | 2 cut(s) | 1050, 3301 |
| PkrI | GCNGC | 7 cut(s) | 463, 1234, 1315, 2829, 2850, 3698, 3968 |
| PleI | GAGTC | 7 cut(s) | 1522, 1730, 1842, 1854, 2433, 2526, 3465 |
| PpsI | GAGTC | 7 cut(s) | 1522, 1730, 1842, 1854, 2433, 2526, 3465 |
| Ppu21I | YACGTR | 2 cut(s) | 3770, 3828 |
| PshBI | ATTAAT | 1 cut(s) | 1037 |
| PsiI | TTATAA | 1 cut(s) | 711 |
| Psp124BI | GAGCTC | 2 cut(s) | 216, 1137 |
| Psp1406I | AACGTT | 2 cut(s) | 1954, 2788 |
| Psp6I | CCWGG | 8 cut(s) | 1050, 1528, 3234, 3301, 3463, 3520, 3850, 3882 |
| PspFI | CCCAGC | 1 cut(s) | 400 |
| PspGI | CCWGG | 8 cut(s) | 1050, 1528, 3234, 3301, 3463, 3520, 3850, 3882 |
| PspN4I | GGNNCC | 2 cut(s) | 376, 1660 |
| PspPI | GGNCC | 3 cut(s) | 1048, 1432, 3848 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1350, 1382, 1800, 1832 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3053 |
| PsuI | RGATCY | 2 cut(s) | 1960, 2770 |
| PvuII | CAGCTG | 1 cut(s) | 3845 |
| RsaI | GTAC | 8 cut(s) | 59, 376, 1368, 1495, 1660, 3450, 3506, 3658 |
| RsaNI | GTAC | 8 cut(s) | 58, 375, 1367, 1494, 1659, 3449, 3505, 3657 |
| RseI | CAYNNNNRTG | 9 cut(s) | 152, 1401, 1415, 1466, 1560, 1616, 1847, 3512, 3747 |
| SacI | GAGCTC | 2 cut(s) | 216, 1137 |
| SapI | GCTCTTC | 1 cut(s) | 1201 |
| SatI | GCNGC | 7 cut(s) | 462, 1233, 1314, 2828, 2849, 3697, 3967 |
| Sau3AI | GATC | 9 cut(s) | 6, 160, 346, 870, 1063, 1960, 2770, 3558, 3799 |
| Sau96I | GGNCC | 3 cut(s) | 1048, 1432, 3848 |
| SchI | GAGTC | 7 cut(s) | 1523, 1731, 1843, 1854, 2434, 2527, 3466 |
| ScrFI | CCNGG | 8 cut(s) | 1052, 1530, 3236, 3303, 3465, 3522, 3852, 3884 |
| SduI | GDGCHC | 4 cut(s) | 216, 1137, 1422, 3086 |
| SfcI | CTRYAG | 1 cut(s) | 3999 |
| Sfr274I | CTCGAG | 1 cut(s) | 1076 |
| SfuI | TTCGAA | 2 cut(s) | 1248, 3719 |
| SinI | GGWCC | 2 cut(s) | 1048, 3848 |
| SlaI | CTCGAG | 1 cut(s) | 1076 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 152, 1401, 1415, 1466, 1560, 1616, 1847, 3512, 3747 |
| SmlI | CTYRAG | 6 cut(s) | 1076, 1161, 1747, 1862, 2054, 2123 |
| SmoI | CTYRAG | 6 cut(s) | 1076, 1161, 1747, 1862, 2054, 2123 |
| SphI | GCATGC | 2 cut(s) | 3138, 3921 |
| SseBI | AGGCCT | 1 cut(s) | 1167 |
| SsiI | CCGC | 6 cut(s) | 1364, 2828, 2991, 3132, 3660, 3921 |
| SspI | AATATT | 3 cut(s) | 1588, 2219, 3904 |
| SstI | GAGCTC | 2 cut(s) | 216, 1137 |
| StuI | AGGCCT | 1 cut(s) | 1167 |
| StyD4I | CCNGG | 8 cut(s) | 1050, 1528, 3234, 3301, 3463, 3520, 3850, 3882 |
| StyI | CCWWGG | 7 cut(s) | 50, 1384, 2117, 2229, 2298, 2436, 3569 |
| TaaI | ACNGT | 9 cut(s) | 122, 936, 1186, 1571, 1703, 1772, 1846, 3077, 3687 |
| TaiI | ACGT | 9 cut(s) | 133, 175, 1147, 1957, 2454, 2791, 3028, 3772, 3830 |
| TatI | WGTACW | 2 cut(s) | 3448, 3504 |
| TauI | GCSGC | 1 cut(s) | 2830 |
| TscAI | CASTG | 5 cut(s) | 127, 514, 1155, 2802, 3706 |
| TseFI | GTSAC | 2 cut(s) | 923, 1515 |
| TseI | GCWGC | 6 cut(s) | 461, 1232, 1313, 2848, 3696, 3966 |
| Tsp45I | GTSAC | 2 cut(s) | 923, 1515 |
| TspGWI | ACGGA | 1 cut(s) | 2856 |
| TspRI | CASTG | 5 cut(s) | 127, 514, 1155, 2802, 3706 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1057, 3343 |
| Vha464I | CTTAAG | 1 cut(s) | 2123 |
| VpaK11BI | GGWCC | 2 cut(s) | 1048, 3848 |
| VspI | ATTAAT | 1 cut(s) | 1037 |
| XapI | RAATTY | 7 cut(s) | 410, 562, 728, 766, 1978, 3035, 3889 |
| XbaI | TCTAGA | 4 cut(s) | 1963, 2857, 3166, 3193 |
| XceI | RCATGY | 6 cut(s) | 1335, 1364, 1400, 1678, 3138, 3921 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 268, 3635 |
| XhoI | CTCGAG | 1 cut(s) | 1076 |
| XmaJI | CCTAGG | 1 cut(s) | 3569 |
| XmiI | GTMKAC | 1 cut(s) | 2594 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2943 |
| Zsp2I | ATGCAT | 2 cut(s) | 256, 3140 |