TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 29 - 104 | 2e-27 | TIR domain |
| TIR_2 | PF13676 | 31 - 103 | 1.2e-12 | TIR domain |
| TIR | PF01582 | 104 - 170 | 1.1e-10 | TIR domain |
| NB-ARC | PF00931 | 195 - 357 | 9.6e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 428 - 500 | 4.6e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 739 - 910 | 1.9e-23 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 764 - 830 | 4e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2151 |
| AatII | GACGTC | 1 cut(s) | 1368 |
| Acc36I | ACCTGC | 1 cut(s) | 2979 |
| AccI | GTMKAC | 3 cut(s) | 571, 1329, 2748 |
| AccII | CGCG | 1 cut(s) | 121 |
| AciI | CCGC | 3 cut(s) | 1828, 2175, 2732 |
| AclI | AACGTT | 1 cut(s) | 970 |
| AclWI | GGATC | 5 cut(s) | 308, 321, 1214, 1962, 2313 |
| AcoI | YGGCCR | 1 cut(s) | 1751 |
| AcsI | RAATTY | 9 cut(s) | 473, 945, 1861, 1885, 2026, 2261, 2392, 2666, 2718 |
| AcuI | CTGAAG | 1 cut(s) | 1909 |
| AcyI | GRCGYC | 1 cut(s) | 1365 |
| AdeI | CACNNNGTG | 1 cut(s) | 1106 |
| AfaI | GTAC | 1 cut(s) | 2615 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1402, 2812 |
| AflIII | ACRYGT | 2 cut(s) | 595, 1877 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 460, 578 |
| AjiI | CACGTC | 2 cut(s) | 880, 1243 |
| AjnI | CCWGG | 5 cut(s) | 637, 934, 1078, 1122, 1510 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 537, 569 |
| AleI | CACNNNNGTG | 2 cut(s) | 336, 662 |
| Alw21I | GWGCWC | 3 cut(s) | 195, 1248, 2183 |
| Alw26I | GTCTC | 5 cut(s) | 48, 167, 755, 1233, 2701 |
| AlwI | GGATC | 5 cut(s) | 308, 321, 1214, 1962, 2313 |
| Ama87I | CYCGRG | 1 cut(s) | 507 |
| AoxI | GGCC | 6 cut(s) | 443, 635, 932, 1126, 1404, 1751 |
| ApeKI | GCWGC | 9 cut(s) | 20, 23, 218, 410, 425, 1521, 1824, 2412, 2825 |
| ApoI | RAATTY | 9 cut(s) | 473, 945, 1861, 1885, 2026, 2261, 2392, 2666, 2718 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1058 |
| AspLEI | GCGC | 2 cut(s) | 123, 2981 |
| AspS9I | GGNCC | 6 cut(s) | 635, 932, 1126, 1600, 2920, 2968 |
| AsuC2I | CCSGG | 2 cut(s) | 1919, 2966 |
| AsuHPI | GGTGA | 4 cut(s) | 59, 362, 1491, 2653 |
| AsuII | TTCGAA | 1 cut(s) | 2267 |
| AvaI | CYCGRG | 1 cut(s) | 507 |
| AvaII | GGWCC | 3 cut(s) | 1600, 2920, 2968 |
| BalI | TGGCCA | 1 cut(s) | 1753 |
| BamHI | GGATCC | 1 cut(s) | 313 |
| BanII | GRGCYC | 1 cut(s) | 195 |
| BbsI | GAAGAC | 2 cut(s) | 256, 2639 |
| Bbv12I | GWGCWC | 3 cut(s) | 195, 1248, 2183 |
| BbvI | GCAGC | 9 cut(s) | 32, 35, 230, 422, 437, 1533, 1836, 2424, 2812 |
| BccI | CCATC | 7 cut(s) | 435, 922, 1786, 2501, 2676, 2815, 2991 |
| BceAI | ACGGC | 2 cut(s) | 135, 472 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1772, 1806 |
| BciT130I | CCWGG | 5 cut(s) | 639, 936, 1080, 1124, 1512 |
| BciVI | GTATCC | 1 cut(s) | 109 |
| BclI | TGATCA | 1 cut(s) | 370 |
| BcnI | CCSGG | 2 cut(s) | 1919, 2966 |
| BcoDI | GTCTC | 5 cut(s) | 48, 167, 755, 1233, 2701 |
| BfaI | CTAG | 5 cut(s) | 746, 1349, 1707, 1976, 2225 |
| BfmI | CTRYAG | 1 cut(s) | 2534 |
| BfoI | RGCGCY | 1 cut(s) | 2982 |
| BfuAI | ACCTGC | 1 cut(s) | 2979 |
| BfuI | GTATCC | 1 cut(s) | 109 |
| BglII | AGATCT | 1 cut(s) | 728 |
| Bme1390I | CCNGG | 7 cut(s) | 639, 936, 1080, 1124, 1512, 1919, 2966 |
| Bme18I | GGWCC | 3 cut(s) | 1600, 2920, 2968 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 460, 578 |
| BmeT110I | CYCGRG | 1 cut(s) | 507 |
| BmgBI | CACGTC | 2 cut(s) | 880, 1243 |
| BmgT120I | GGNCC | 6 cut(s) | 635, 932, 1126, 1600, 2920, 2968 |
| BmiI | GGNNCC | 4 cut(s) | 315, 636, 1602, 2127 |
| BmrFI | CCNGG | 7 cut(s) | 639, 936, 1080, 1124, 1512, 1919, 2966 |
| BmrI | ACTGGG | 2 cut(s) | 2367, 2916 |
| BmsI | GCATC | 9 cut(s) | 834, 1252, 1342, 1440, 2546, 2667, 2780, 2825, 2921 |
| BmuI | ACTGGG | 2 cut(s) | 2367, 2916 |
| BoxI | GACNNNNGTC | 1 cut(s) | 882 |
| BpiI | GAAGAC | 2 cut(s) | 256, 2639 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1230, 1262 |
| BpmI | CTGGAG | 1 cut(s) | 1062 |
| Bpu14I | TTCGAA | 1 cut(s) | 2267 |
| BpuEI | CTTGAG | 2 cut(s) | 2086, 2314 |
| BpuMI | CCSGG | 2 cut(s) | 1919, 2966 |
| BsaHI | GRCGYC | 1 cut(s) | 1365 |
| BsaI | GGTCTC | 1 cut(s) | 167 |
| BsaJI | CCNNGG | 5 cut(s) | 1122, 1123, 1511, 1604, 2137 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1402, 2812 |
| Bse1I | ACTGG | 7 cut(s) | 27, 312, 1732, 2362, 2826, 2879, 2911 |
| Bse3DI | GCAATG | 3 cut(s) | 814, 1775, 2834 |
| BseBI | CCWGG | 5 cut(s) | 639, 936, 1080, 1124, 1512 |
| BseDI | CCNNGG | 5 cut(s) | 1122, 1123, 1511, 1604, 2137 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1402, 2812 |
| BseMI | GCAATG | 3 cut(s) | 814, 1775, 2834 |
| BseMII | CTCAG | 5 cut(s) | 89, 208, 333, 456, 1659 |
| BseNI | ACTGG | 7 cut(s) | 27, 312, 1732, 2362, 2826, 2879, 2911 |
| BseRI | GAGGAG | 3 cut(s) | 216, 254, 1196 |
| BseXI | GCAGC | 9 cut(s) | 32, 35, 230, 422, 437, 1533, 1836, 2424, 2812 |
| BseYI | CCCAGC | 1 cut(s) | 2598 |
| BsgI | GTGCAG | 3 cut(s) | 1128, 2431, 2957 |
| Bsh1236I | CGCG | 1 cut(s) | 121 |
| BshFI | GGCC | 6 cut(s) | 445, 637, 934, 1128, 1406, 1753 |
| BsiHKAI | GWGCWC | 3 cut(s) | 195, 1248, 2183 |
| BsiHKCI | CYCGRG | 1 cut(s) | 507 |
| BsiSI | CCGG | 2 cut(s) | 1919, 2966 |
| BslFI | GGGAC | 3 cut(s) | 800, 1586, 1866 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1402, 2812 |
| BsmAI | GTCTC | 5 cut(s) | 48, 167, 755, 1233, 2701 |
| BsmBI | CGTCTC | 2 cut(s) | 48, 1233 |
| BsmFI | GGGAC | 3 cut(s) | 800, 1586, 1866 |
| BsmI | GAATGC | 4 cut(s) | 1058, 1060, 1593, 1636 |
| BsnI | GGCC | 6 cut(s) | 445, 637, 934, 1128, 1406, 1753 |
| Bso31I | GGTCTC | 1 cut(s) | 167 |
| BsoBI | CYCGRG | 1 cut(s) | 507 |
| Bsp119I | TTCGAA | 1 cut(s) | 2267 |
| Bsp1286I | GDGCHC | 3 cut(s) | 195, 1248, 2183 |
| Bsp143I | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| BspACI | CCGC | 3 cut(s) | 1828, 2175, 2732 |
| BspANI | GGCC | 6 cut(s) | 445, 637, 934, 1128, 1406, 1753 |
| BspCNI | CTCAG | 5 cut(s) | 90, 207, 332, 457, 1658 |
| BspFNI | CGCG | 1 cut(s) | 121 |
| BspHI | TCATGA | 1 cut(s) | 2583 |
| BspLI | GGNNCC | 4 cut(s) | 315, 636, 1602, 2127 |
| BspMI | ACCTGC | 1 cut(s) | 2979 |
| BspPI | GGATC | 5 cut(s) | 308, 321, 1214, 1962, 2313 |
| BspT104I | TTCGAA | 1 cut(s) | 2267 |
| BspTNI | GGTCTC | 1 cut(s) | 167 |
| BsrDI | GCAATG | 3 cut(s) | 814, 1775, 2834 |
| BsrI | ACTGG | 7 cut(s) | 27, 312, 1732, 2362, 2826, 2879, 2911 |
| BssECI | CCNNGG | 5 cut(s) | 1122, 1123, 1511, 1604, 2137 |
| BssMI | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| BssNI | GRCGYC | 1 cut(s) | 1365 |
| BssT1I | CCWWGG | 1 cut(s) | 2137 |
| Bst2UI | CCWGG | 5 cut(s) | 639, 936, 1080, 1124, 1512 |
| Bst4CI | ACNGT | 4 cut(s) | 1967, 2108, 2246, 2409 |
| Bst6I | CTCTTC | 1 cut(s) | 193 |
| BstACI | GRCGYC | 1 cut(s) | 1365 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1106 |
| BstBI | TTCGAA | 1 cut(s) | 2267 |
| BstC8I | GCNNGC | 3 cut(s) | 1357, 2252, 2656 |
| BstDSI | CCRYGG | 1 cut(s) | 1604 |
| BstFNI | CGCG | 1 cut(s) | 121 |
| BstH2I | RGCGCY | 1 cut(s) | 2982 |
| BstHHI | GCGC | 2 cut(s) | 123, 2981 |
| BstKTI | GATC | 9 cut(s) | 139, 316, 373, 731, 778, 1027, 1222, 1957, 2308 |
| BstMAI | GTCTC | 5 cut(s) | 48, 167, 755, 1233, 2701 |
| BstMBI | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 624, 1106, 1750, 2822 |
| BstNI | CCWGG | 5 cut(s) | 639, 936, 1080, 1124, 1512 |
| BstNSI | RCATGY | 2 cut(s) | 599, 1881 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 882 |
| BstSCI | CCNGG | 7 cut(s) | 637, 934, 1078, 1122, 1510, 1917, 2964 |
| BstSFI | CTRYAG | 1 cut(s) | 2534 |
| BstUI | CGCG | 1 cut(s) | 121 |
| BstV1I | GCAGC | 9 cut(s) | 32, 35, 230, 422, 437, 1533, 1836, 2424, 2812 |
| BstV2I | GAAGAC | 2 cut(s) | 256, 2639 |
| BstX2I | RGATCY | 5 cut(s) | 313, 728, 1219, 1954, 2305 |
| BstYI | RGATCY | 5 cut(s) | 313, 728, 1219, 1954, 2305 |
| BsuI | GTATCC | 1 cut(s) | 109 |
| BsuRI | GGCC | 6 cut(s) | 445, 637, 934, 1128, 1406, 1753 |
| BtgI | CCRYGG | 1 cut(s) | 1604 |
| BtgZI | GCGATG | 1 cut(s) | 2695 |
| BtrI | CACGTC | 2 cut(s) | 880, 1243 |
| BtsIMutI | CAGTG | 6 cut(s) | 1380, 1933, 2355, 2819, 2886, 2904 |
| BveI | ACCTGC | 1 cut(s) | 2979 |
| Cac8I | GCNNGC | 3 cut(s) | 1357, 2252, 2656 |
| CciI | TCATGA | 1 cut(s) | 2583 |
| CfoI | GCGC | 2 cut(s) | 123, 2981 |
| Cfr13I | GGNCC | 6 cut(s) | 635, 932, 1126, 1600, 2920, 2968 |
| CseI | GACGC | 2 cut(s) | 362, 2449 |
| Csp6I | GTAC | 1 cut(s) | 2614 |
| CviQI | GTAC | 1 cut(s) | 2614 |
| DpnI | GATC | 9 cut(s) | 138, 315, 372, 730, 777, 1026, 1221, 1956, 2307 |
| DpnII | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| DraI | TTTAAA | 2 cut(s) | 1281, 1315 |
| DraIII | CACNNNGTG | 1 cut(s) | 1106 |
| DriI | GACNNNNNGTC | 2 cut(s) | 460, 578 |
| EaeI | YGGCCR | 1 cut(s) | 1751 |
| Eam1104I | CTCTTC | 1 cut(s) | 193 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 460, 578 |
| EarI | CTCTTC | 1 cut(s) | 193 |
| EciI | GGCGGA | 1 cut(s) | 2721 |
| Ecl136II | GAGCTC | 1 cut(s) | 193 |
| Eco130I | CCWWGG | 1 cut(s) | 2137 |
| Eco147I | AGGCCT | 1 cut(s) | 1406 |
| Eco24I | GRGCYC | 1 cut(s) | 195 |
| Eco31I | GGTCTC | 1 cut(s) | 167 |
| Eco32I | GATATC | 1 cut(s) | 2548 |
| Eco47I | GGWCC | 3 cut(s) | 1600, 2920, 2968 |
| Eco53kI | GAGCTC | 1 cut(s) | 193 |
| Eco57I | CTGAAG | 1 cut(s) | 1909 |
| Eco88I | CYCGRG | 1 cut(s) | 507 |
| EcoICRI | GAGCTC | 1 cut(s) | 193 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1126, 1600 |
| EcoRI | GAATTC | 1 cut(s) | 945 |
| EcoRII | CCWGG | 5 cut(s) | 637, 934, 1078, 1122, 1510 |
| EcoRV | GATATC | 1 cut(s) | 2548 |
| EcoT14I | CCWWGG | 1 cut(s) | 2137 |
| EcoT22I | ATGCAT | 2 cut(s) | 1060, 1455 |
| EcoT38I | GRGCYC | 1 cut(s) | 195 |
| ErhI | CCWWGG | 1 cut(s) | 2137 |
| Esp3I | CGTCTC | 2 cut(s) | 48, 1233 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 328, 360, 750, 782, 2776, 2808 |
| FaqI | GGGAC | 3 cut(s) | 800, 1586, 1866 |
| FauI | CCCGC | 1 cut(s) | 2168 |
| FauNDI | CATATG | 2 cut(s) | 629, 2932 |
| FbaI | TGATCA | 1 cut(s) | 370 |
| FblI | GTMKAC | 3 cut(s) | 571, 1329, 2748 |
| FriOI | GRGCYC | 1 cut(s) | 195 |
| FspBI | CTAG | 5 cut(s) | 746, 1349, 1707, 1976, 2225 |
| GlaI | GCGC | 2 cut(s) | 122, 2980 |
| GsaI | CCCAGC | 1 cut(s) | 2602 |
| GsuI | CTGGAG | 1 cut(s) | 1062 |
| HaeII | RGCGCY | 1 cut(s) | 2982 |
| HaeIII | GGCC | 6 cut(s) | 445, 637, 934, 1128, 1406, 1753 |
| HapII | CCGG | 2 cut(s) | 1919, 2966 |
| HgaI | GACGC | 2 cut(s) | 362, 2449 |
| HhaI | GCGC | 2 cut(s) | 123, 2981 |
| Hin1I | GRCGYC | 1 cut(s) | 1365 |
| Hin6I | GCGC | 2 cut(s) | 121, 2979 |
| HinP1I | GCGC | 2 cut(s) | 121, 2979 |
| HincII | GTYRAC | 3 cut(s) | 517, 1549, 1875 |
| HindII | GTYRAC | 3 cut(s) | 517, 1549, 1875 |
| HindIII | AAGCTT | 4 cut(s) | 1639, 1658, 2153, 2252 |
| HpaI | GTTAAC | 2 cut(s) | 517, 1875 |
| HpaII | CCGG | 2 cut(s) | 1919, 2966 |
| HphI | GGTGA | 4 cut(s) | 59, 362, 1491, 2653 |
| Hpy166II | GTNNAC | 7 cut(s) | 517, 572, 1330, 1549, 1875, 2749, 2923 |
| Hpy8I | GTNNAC | 7 cut(s) | 517, 572, 1330, 1549, 1875, 2749, 2923 |
| Hpy99I | CGWCG | 1 cut(s) | 1367 |
| HpyAV | CCTTC | 9 cut(s) | 187, 400, 531, 695, 793, 1139, 1426, 2015, 2273 |
| HpyCH4III | ACNGT | 4 cut(s) | 1967, 2108, 2246, 2409 |
| HpyCH4IV | ACGT | 6 cut(s) | 537, 879, 970, 1242, 1365, 1855 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 624, 1106, 1750, 2822 |
| HpySE526I | ACGT | 6 cut(s) | 537, 879, 970, 1242, 1365, 1855 |
| Hsp92I | GRCGYC | 1 cut(s) | 1365 |
| HspAI | GCGC | 2 cut(s) | 121, 2979 |
| Ksp22I | TGATCA | 1 cut(s) | 370 |
| KspAI | GTTAAC | 2 cut(s) | 517, 1875 |
| Kzo9I | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| Lsp1109I | GCAGC | 9 cut(s) | 32, 35, 230, 422, 437, 1533, 1836, 2424, 2812 |
| LweI | GCATC | 9 cut(s) | 834, 1252, 1342, 1440, 2546, 2667, 2780, 2825, 2921 |
| MaeI | CTAG | 5 cut(s) | 746, 1349, 1707, 1976, 2225 |
| MaeII | ACGT | 6 cut(s) | 537, 879, 970, 1242, 1365, 1855 |
| MaeIII | GTNAC | 6 cut(s) | 350, 538, 740, 1497, 1961, 2158 |
| MalI | GATC | 9 cut(s) | 138, 315, 372, 730, 777, 1026, 1221, 1956, 2307 |
| MboI | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| MfeI | CAATTG | 4 cut(s) | 234, 552, 660, 2343 |
| MflI | RGATCY | 5 cut(s) | 313, 728, 1219, 1954, 2305 |
| MhlI | GDGCHC | 3 cut(s) | 195, 1248, 2183 |
| MlsI | TGGCCA | 1 cut(s) | 1753 |
| MluNI | TGGCCA | 1 cut(s) | 1753 |
| MmeI | TCCRAC | 5 cut(s) | 1752, 1932, 1978, 2073, 2523 |
| Mox20I | TGGCCA | 1 cut(s) | 1753 |
| Mph1103I | ATGCAT | 2 cut(s) | 1060, 1455 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1058 |
| MscI | TGGCCA | 1 cut(s) | 1753 |
| MslI | CAYNNNNRTG | 3 cut(s) | 336, 662, 1843 |
| Msp20I | TGGCCA | 1 cut(s) | 1753 |
| MspI | CCGG | 2 cut(s) | 1919, 2966 |
| MspR9I | CCNGG | 7 cut(s) | 639, 936, 1080, 1124, 1512, 1919, 2966 |
| MunI | CAATTG | 4 cut(s) | 234, 552, 660, 2343 |
| Mva1269I | GAATGC | 4 cut(s) | 1058, 1060, 1593, 1636 |
| MvaI | CCWGG | 5 cut(s) | 639, 936, 1080, 1124, 1512 |
| MvnI | CGCG | 1 cut(s) | 121 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 624, 1106, 1750, 2822 |
| NciI | CCSGG | 2 cut(s) | 1919, 2966 |
| NdeI | CATATG | 2 cut(s) | 629, 2932 |
| NdeII | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| NlaIV | GGNNCC | 4 cut(s) | 315, 636, 1602, 2127 |
| NmuCI | GTSAC | 4 cut(s) | 350, 740, 1497, 1961 |
| NsiI | ATGCAT | 2 cut(s) | 1060, 1455 |
| NspI | RCATGY | 2 cut(s) | 599, 1881 |
| NspV | TTCGAA | 1 cut(s) | 2267 |
| OliI | CACNNNNGTG | 2 cut(s) | 336, 662 |
| PagI | TCATGA | 1 cut(s) | 2583 |
| PasI | CCCWGGG | 1 cut(s) | 1123 |
| PceI | AGGCCT | 1 cut(s) | 1406 |
| PciI | ACATGT | 2 cut(s) | 595, 1877 |
| PctI | GAATGC | 4 cut(s) | 1058, 1060, 1593, 1636 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1058 |
| PfoI | TCCNGGA | 2 cut(s) | 1917, 2964 |
| PpuMI | RGGWCCY | 1 cut(s) | 1600 |
| PscI | ACATGT | 2 cut(s) | 595, 1877 |
| PshAI | GACNNNNGTC | 1 cut(s) | 882 |
| PsiI | TTATAA | 1 cut(s) | 2151 |
| Psp124BI | GAGCTC | 1 cut(s) | 195 |
| Psp1406I | AACGTT | 1 cut(s) | 970 |
| Psp5II | RGGWCCY | 1 cut(s) | 1600 |
| Psp6I | CCWGG | 5 cut(s) | 637, 934, 1078, 1122, 1510 |
| PspFI | CCCAGC | 1 cut(s) | 2598 |
| PspGI | CCWGG | 5 cut(s) | 637, 934, 1078, 1122, 1510 |
| PspN4I | GGNNCC | 4 cut(s) | 315, 636, 1602, 2127 |
| PspPI | GGNCC | 6 cut(s) | 635, 932, 1126, 1600, 2920, 2968 |
| PspPPI | RGGWCCY | 1 cut(s) | 1600 |
| PsuI | RGATCY | 5 cut(s) | 313, 728, 1219, 1954, 2305 |
| RsaI | GTAC | 1 cut(s) | 2615 |
| RsaNI | GTAC | 1 cut(s) | 2614 |
| RseI | CAYNNNNRTG | 3 cut(s) | 336, 662, 1843 |
| SacI | GAGCTC | 1 cut(s) | 195 |
| Sau3AI | GATC | 9 cut(s) | 136, 313, 370, 728, 775, 1024, 1219, 1954, 2305 |
| Sau96I | GGNCC | 6 cut(s) | 635, 932, 1126, 1600, 2920, 2968 |
| ScrFI | CCNGG | 7 cut(s) | 639, 936, 1080, 1124, 1512, 1919, 2966 |
| SduI | GDGCHC | 3 cut(s) | 195, 1248, 2183 |
| SfaNI | GCATC | 9 cut(s) | 834, 1252, 1342, 1440, 2546, 2667, 2780, 2825, 2921 |
| SfcI | CTRYAG | 1 cut(s) | 2534 |
| SfuI | TTCGAA | 1 cut(s) | 2267 |
| SinI | GGWCC | 3 cut(s) | 1600, 2920, 2968 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 336, 662, 1843 |
| SmlI | CTYRAG | 2 cut(s) | 2065, 2293 |
| SmoI | CTYRAG | 2 cut(s) | 2065, 2293 |
| SseBI | AGGCCT | 1 cut(s) | 1406 |
| SsiI | CCGC | 3 cut(s) | 1828, 2175, 2732 |
| SspMI | CTAG | 5 cut(s) | 746, 1349, 1707, 1976, 2225 |
| SstI | GAGCTC | 1 cut(s) | 195 |
| StuI | AGGCCT | 1 cut(s) | 1406 |
| StyD4I | CCNGG | 7 cut(s) | 637, 934, 1078, 1122, 1510, 1917, 2964 |
| StyI | CCWWGG | 1 cut(s) | 2137 |
| TaaI | ACNGT | 4 cut(s) | 1967, 2108, 2246, 2409 |
| TaiI | ACGT | 6 cut(s) | 540, 882, 973, 1245, 1368, 1858 |
| TaqI | TCGA | 7 cut(s) | 106, 245, 328, 600, 1812, 2267, 2505 |
| TauI | GCSGC | 1 cut(s) | 1830 |
| TscAI | CASTG | 6 cut(s) | 1380, 1933, 2362, 2826, 2886, 2911 |
| TseFI | GTSAC | 4 cut(s) | 350, 740, 1497, 1961 |
| TseI | GCWGC | 9 cut(s) | 20, 23, 218, 410, 425, 1521, 1824, 2412, 2825 |
| Tsp45I | GTSAC | 4 cut(s) | 350, 740, 1497, 1961 |
| TspGWI | ACGGA | 3 cut(s) | 1752, 2452, 2766 |
| TspRI | CASTG | 6 cut(s) | 1380, 1933, 2362, 2826, 2886, 2911 |
| VpaK11BI | GGWCC | 3 cut(s) | 1600, 2920, 2968 |
| XapI | RAATTY | 9 cut(s) | 473, 945, 1861, 1885, 2026, 2261, 2392, 2666, 2718 |
| XbaI | TCTAGA | 2 cut(s) | 1706, 2224 |
| XceI | RCATGY | 2 cut(s) | 599, 1881 |
| XmiI | GTMKAC | 3 cut(s) | 571, 1329, 2748 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1058 |
| XspI | CTAG | 5 cut(s) | 746, 1349, 1707, 1976, 2225 |
| ZraI | GACGTC | 1 cut(s) | 1366 |
| Zsp2I | ATGCAT | 2 cut(s) | 1060, 1455 |