TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 3 - 44 | 1.3e-06 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 159 |
| AcsI | RAATTY | 2 cut(s) | 46, 265 |
| AflIII | ACRYGT | 1 cut(s) | 82 |
| AlwI | GGATC | 1 cut(s) | 159 |
| Ama87I | CYCGRG | 1 cut(s) | 228 |
| ApeKI | GCWGC | 1 cut(s) | 259 |
| ApoI | RAATTY | 2 cut(s) | 46, 265 |
| AvaI | CYCGRG | 1 cut(s) | 228 |
| BbvI | GCAGC | 1 cut(s) | 271 |
| BfaI | CTAG | 4 cut(s) | 32, 132, 137, 309 |
| BisI | GCNGC | 1 cut(s) | 260 |
| BlpI | GCTNAGC | 1 cut(s) | 300 |
| BlsI | GCNGC | 1 cut(s) | 261 |
| BmeT110I | CYCGRG | 1 cut(s) | 228 |
| BmiI | GGNNCC | 1 cut(s) | 171 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 28 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 300 |
| BseMII | CTCAG | 2 cut(s) | 6, 291 |
| BseXI | GCAGC | 1 cut(s) | 271 |
| BsiHKCI | CYCGRG | 1 cut(s) | 228 |
| BslFI | GGGAC | 1 cut(s) | 231 |
| BsmFI | GGGAC | 1 cut(s) | 231 |
| BsoBI | CYCGRG | 1 cut(s) | 228 |
| Bsp143I | GATC | 2 cut(s) | 139, 151 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 300 |
| BspCNI | CTCAG | 2 cut(s) | 7, 292 |
| BspLI | GGNNCC | 1 cut(s) | 171 |
| BspPI | GGATC | 1 cut(s) | 159 |
| BssMI | GATC | 2 cut(s) | 139, 151 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 128 |
| BstC8I | GCNNGC | 1 cut(s) | 225 |
| BstDEI | CTNAG | 2 cut(s) | 15, 300 |
| BstKTI | GATC | 2 cut(s) | 142, 154 |
| BstMBI | GATC | 2 cut(s) | 139, 151 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 128 |
| BstNSI | RCATGY | 1 cut(s) | 86 |
| BstV1I | GCAGC | 1 cut(s) | 271 |
| BstX2I | RGATCY | 1 cut(s) | 151 |
| BstYI | RGATCY | 1 cut(s) | 151 |
| Cac8I | GCNNGC | 1 cut(s) | 225 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 87, 122 |
| CviAII | CATG | 2 cut(s) | 56, 83 |
| CviJI | RGCY | 3 cut(s) | 170, 299, 304 |
| CviKI_1 | RGCY | 3 cut(s) | 170, 299, 304 |
| DdeI | CTNAG | 2 cut(s) | 15, 300 |
| DpnI | GATC | 2 cut(s) | 141, 153 |
| DpnII | GATC | 2 cut(s) | 139, 151 |
| Eco88I | CYCGRG | 1 cut(s) | 228 |
| FaeI | CATG | 2 cut(s) | 59, 86 |
| FaiI | YATR | 7 cut(s) | 57, 84, 144, 182, 198, 221, 281 |
| FaqI | GGGAC | 1 cut(s) | 231 |
| FatI | CATG | 2 cut(s) | 55, 82 |
| Fnu4HI | GCNGC | 1 cut(s) | 260 |
| Fsp4HI | GCNGC | 1 cut(s) | 260 |
| FspBI | CTAG | 4 cut(s) | 32, 132, 137, 309 |
| GluI | GCNGC | 1 cut(s) | 260 |
| Hin1II | CATG | 2 cut(s) | 59, 86 |
| HinfI | GANTC | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 2 cut(s) | 16, 27 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 92, 137 |
| HpyCH4IV | ACGT | 2 cut(s) | 189, 244 |
| HpyCH4V | TGCA | 1 cut(s) | 259 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 128 |
| HpyF3I | CTNAG | 2 cut(s) | 15, 300 |
| HpySE526I | ACGT | 2 cut(s) | 189, 244 |
| Hsp92II | CATG | 2 cut(s) | 59, 86 |
| Kzo9I | GATC | 2 cut(s) | 139, 151 |
| LmnI | GCTCC | 1 cut(s) | 175 |
| LpnPI | CCDG | 3 cut(s) | 170, 186, 221 |
| Lsp1109I | GCAGC | 1 cut(s) | 271 |
| MaeI | CTAG | 4 cut(s) | 32, 132, 137, 309 |
| MaeII | ACGT | 2 cut(s) | 189, 244 |
| MaeIII | GTNAC | 1 cut(s) | 209 |
| MalI | GATC | 2 cut(s) | 141, 153 |
| MboI | GATC | 2 cut(s) | 139, 151 |
| MflI | RGATCY | 1 cut(s) | 151 |
| MluCI | AATT | 3 cut(s) | 46, 205, 265 |
| MmeI | TCCRAC | 1 cut(s) | 5 |
| MnlI | CCTC | 4 cut(s) | 10, 160, 193, 315 |
| MseI | TTAA | 1 cut(s) | 273 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 128 |
| NdeII | GATC | 2 cut(s) | 139, 151 |
| NlaIII | CATG | 2 cut(s) | 59, 86 |
| NlaIV | GGNNCC | 1 cut(s) | 171 |
| NspI | RCATGY | 1 cut(s) | 86 |
| PciI | ACATGT | 1 cut(s) | 82 |
| PfeI | GAWTC | 1 cut(s) | 28 |
| PkrI | GCNGC | 1 cut(s) | 261 |
| PscI | ACATGT | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 1 cut(s) | 171 |
| PsuI | RGATCY | 1 cut(s) | 151 |
| SaqAI | TTAA | 1 cut(s) | 273 |
| SatI | GCNGC | 1 cut(s) | 260 |
| Sau3AI | GATC | 2 cut(s) | 139, 151 |
| SetI | ASST | 4 cut(s) | 21, 192, 240, 247 |
| Sse9I | AATT | 3 cut(s) | 46, 205, 265 |
| SspMI | CTAG | 4 cut(s) | 32, 132, 137, 309 |
| TaiI | ACGT | 2 cut(s) | 192, 247 |
| TaqI | TCGA | 1 cut(s) | 79 |
| TasI | AATT | 3 cut(s) | 46, 205, 265 |
| TfiI | GAWTC | 1 cut(s) | 28 |
| Tru1I | TTAA | 1 cut(s) | 273 |
| Tru9I | TTAA | 1 cut(s) | 273 |
| TseI | GCWGC | 1 cut(s) | 259 |
| XapI | RAATTY | 2 cut(s) | 46, 265 |
| XbaI | TCTAGA | 2 cut(s) | 31, 136 |
| XceI | RCATGY | 1 cut(s) | 86 |
| XspI | CTAG | 4 cut(s) | 32, 132, 137, 309 |