TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 908 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 847 |
| AccI | GTMKAC | 1 cut(s) | 661 |
| AcsI | RAATTY | 3 cut(s) | 563, 805, 1019 |
| AcuI | CTGAAG | 2 cut(s) | 193, 393 |
| AfaI | GTAC | 3 cut(s) | 176, 417, 554 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 321 |
| AflIII | ACRYGT | 1 cut(s) | 80 |
| AgsI | TTSAA | 4 cut(s) | 285, 768, 785, 874 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 668 |
| AjiI | CACGTC | 1 cut(s) | 955 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 627, 659 |
| AluBI | AGCT | 4 cut(s) | 253, 386, 503, 622 |
| AluI | AGCT | 4 cut(s) | 253, 386, 503, 622 |
| Alw21I | GWGCWC | 1 cut(s) | 255 |
| Alw26I | GTCTC | 4 cut(s) | 197, 551, 833, 855 |
| AoxI | GGCC | 3 cut(s) | 533, 719, 820 |
| ApaI | GGGCCC | 1 cut(s) | 723 |
| ApeKI | GCWGC | 3 cut(s) | 500, 515, 622 |
| ApoI | RAATTY | 3 cut(s) | 563, 805, 1019 |
| AspS9I | GGNCC | 3 cut(s) | 670, 719, 720 |
| AsuC2I | CCSGG | 1 cut(s) | 723 |
| AsuHPI | GGTGA | 3 cut(s) | 89, 452, 889 |
| AvaII | GGWCC | 1 cut(s) | 670 |
| BaeGI | GKGCMC | 1 cut(s) | 723 |
| BanII | GRGCYC | 2 cut(s) | 255, 723 |
| BbsI | GAAGAC | 3 cut(s) | 115, 243, 286 |
| Bbv12I | GWGCWC | 1 cut(s) | 255 |
| BbvI | GCAGC | 3 cut(s) | 512, 527, 609 |
| BccI | CCATC | 3 cut(s) | 25, 525, 997 |
| BciVI | GTATCC | 1 cut(s) | 139 |
| BclI | TGATCA | 3 cut(s) | 94, 460, 889 |
| BcnI | CCSGG | 1 cut(s) | 723 |
| BcoDI | GTCTC | 4 cut(s) | 197, 551, 833, 855 |
| BfaI | CTAG | 2 cut(s) | 824, 966 |
| BfmI | CTRYAG | 1 cut(s) | 355 |
| BfuI | GTATCC | 1 cut(s) | 139 |
| BisI | GCNGC | 3 cut(s) | 501, 516, 623 |
| BlsI | GCNGC | 3 cut(s) | 502, 517, 624 |
| Bme1390I | CCNGG | 1 cut(s) | 723 |
| Bme18I | GGWCC | 1 cut(s) | 670 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 668 |
| BmgBI | CACGTC | 1 cut(s) | 955 |
| BmgT120I | GGNCC | 3 cut(s) | 670, 719, 720 |
| BmiI | GGNNCC | 3 cut(s) | 405, 720, 721 |
| BmrFI | CCNGG | 1 cut(s) | 723 |
| BmsI | GCATC | 2 cut(s) | 676, 909 |
| BpiI | GAAGAC | 3 cut(s) | 115, 243, 286 |
| BpuEI | CTTGAG | 2 cut(s) | 301, 491 |
| BpuMI | CCSGG | 1 cut(s) | 723 |
| BsaAI | YACGTR | 1 cut(s) | 601 |
| BsaI | GGTCTC | 1 cut(s) | 197 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 237, 267, 536, 566 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 321 |
| Bse118I | RCCGGY | 1 cut(s) | 549 |
| Bse1I | ACTGG | 1 cut(s) | 342 |
| Bse3DI | GCAATG | 1 cut(s) | 889 |
| BseGI | GGATG | 6 cut(s) | 65, 536, 637, 760, 924, 989 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 321 |
| BseMI | GCAATG | 1 cut(s) | 889 |
| BseMII | CTCAG | 1 cut(s) | 119 |
| BseNI | ACTGG | 1 cut(s) | 342 |
| BseRI | GAGGAG | 4 cut(s) | 245, 246, 284, 557 |
| BseSI | GKGCMC | 1 cut(s) | 723 |
| BseXI | GCAGC | 3 cut(s) | 512, 527, 609 |
| BsgI | GTGCAG | 1 cut(s) | 608 |
| BshFI | GGCC | 3 cut(s) | 535, 721, 822 |
| BsiHKAI | GWGCWC | 1 cut(s) | 255 |
| BsiSI | CCGG | 2 cut(s) | 550, 723 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 321 |
| BsmAI | GTCTC | 4 cut(s) | 197, 551, 833, 855 |
| BsnI | GGCC | 3 cut(s) | 535, 721, 822 |
| Bso31I | GGTCTC | 1 cut(s) | 197 |
| Bsp120I | GGGCCC | 1 cut(s) | 719 |
| Bsp1286I | GDGCHC | 2 cut(s) | 255, 723 |
| Bsp1407I | TGTACA | 1 cut(s) | 174 |
| Bsp143I | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| BspANI | GGCC | 3 cut(s) | 535, 721, 822 |
| BspCNI | CTCAG | 1 cut(s) | 120 |
| BspLI | GGNNCC | 3 cut(s) | 405, 720, 721 |
| BspMAI | CTGCAG | 1 cut(s) | 359 |
| BspTNI | GGTCTC | 1 cut(s) | 197 |
| BsrDI | GCAATG | 1 cut(s) | 889 |
| BsrFI | RCCGGY | 1 cut(s) | 549 |
| BsrGI | TGTACA | 1 cut(s) | 174 |
| BsrI | ACTGG | 1 cut(s) | 342 |
| BssAI | RCCGGY | 1 cut(s) | 549 |
| BssMI | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| Bst4CI | ACNGT | 2 cut(s) | 611, 745 |
| Bst6I | CTCTTC | 1 cut(s) | 76 |
| BstAUI | TGTACA | 1 cut(s) | 174 |
| BstBAI | YACGTR | 1 cut(s) | 601 |
| BstDEI | CTNAG | 4 cut(s) | 128, 224, 328, 649 |
| BstF5I | GGATG | 6 cut(s) | 65, 536, 637, 760, 924, 989 |
| BstKTI | GATC | 5 cut(s) | 97, 169, 463, 815, 892 |
| BstMAI | GTCTC | 4 cut(s) | 197, 551, 833, 855 |
| BstMBI | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| BstSCI | CCNGG | 1 cut(s) | 721 |
| BstSFI | CTRYAG | 1 cut(s) | 355 |
| BstSLI | GKGCMC | 1 cut(s) | 723 |
| BstV1I | GCAGC | 3 cut(s) | 512, 527, 609 |
| BstV2I | GAAGAC | 3 cut(s) | 115, 243, 286 |
| BsuI | GTATCC | 1 cut(s) | 139 |
| BsuRI | GGCC | 3 cut(s) | 535, 721, 822 |
| BtrI | CACGTC | 1 cut(s) | 955 |
| BtsCI | GGATG | 6 cut(s) | 65, 536, 637, 760, 924, 989 |
| Cfr10I | RCCGGY | 1 cut(s) | 549 |
| Cfr13I | GGNCC | 3 cut(s) | 670, 719, 720 |
| CseI | GACGC | 1 cut(s) | 452 |
| Csp6I | GTAC | 3 cut(s) | 175, 416, 553 |
| CviAII | CATG | 2 cut(s) | 484, 615 |
| CviQI | GTAC | 3 cut(s) | 175, 416, 553 |
| DdeI | CTNAG | 4 cut(s) | 128, 224, 328, 649 |
| DpnI | GATC | 5 cut(s) | 96, 168, 462, 814, 891 |
| DpnII | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| DraI | TTTAAA | 1 cut(s) | 861 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 847 |
| DriI | GACNNNNNGTC | 1 cut(s) | 668 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 847 |
| Eam1104I | CTCTTC | 1 cut(s) | 76 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 668 |
| EarI | CTCTTC | 1 cut(s) | 76 |
| Ecl136II | GAGCTC | 1 cut(s) | 253 |
| Eco147I | AGGCCT | 1 cut(s) | 822 |
| Eco24I | GRGCYC | 2 cut(s) | 255, 723 |
| Eco31I | GGTCTC | 1 cut(s) | 197 |
| Eco47I | GGWCC | 1 cut(s) | 670 |
| Eco53kI | GAGCTC | 1 cut(s) | 253 |
| Eco57I | CTGAAG | 2 cut(s) | 193, 393 |
| EcoICRI | GAGCTC | 1 cut(s) | 253 |
| EcoO109I | RGGNCCY | 1 cut(s) | 719 |
| EcoRI | GAATTC | 1 cut(s) | 1019 |
| EcoT38I | GRGCYC | 2 cut(s) | 255, 723 |
| FaeI | CATG | 2 cut(s) | 487, 618 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 828, 860 |
| FatI | CATG | 2 cut(s) | 483, 614 |
| FauNDI | CATATG | 1 cut(s) | 713 |
| FbaI | TGATCA | 3 cut(s) | 94, 460, 889 |
| FblI | GTMKAC | 1 cut(s) | 661 |
| Fnu4HI | GCNGC | 3 cut(s) | 501, 516, 623 |
| FokI | GGATG | 6 cut(s) | 52, 543, 624, 767, 931, 976 |
| FriOI | GRGCYC | 2 cut(s) | 255, 723 |
| Fsp4HI | GCNGC | 3 cut(s) | 501, 516, 623 |
| FspBI | CTAG | 2 cut(s) | 824, 966 |
| GluI | GCNGC | 3 cut(s) | 501, 516, 623 |
| HaeIII | GGCC | 3 cut(s) | 535, 721, 822 |
| HapII | CCGG | 2 cut(s) | 550, 723 |
| HgaI | GACGC | 1 cut(s) | 452 |
| Hin1II | CATG | 2 cut(s) | 487, 618 |
| HinfI | GANTC | 4 cut(s) | 272, 653, 897, 962 |
| HpaII | CCGG | 2 cut(s) | 550, 723 |
| HphI | GGTGA | 3 cut(s) | 89, 452, 889 |
| Hpy166II | GTNNAC | 2 cut(s) | 662, 673 |
| Hpy188I | TCNGA | 3 cut(s) | 192, 212, 412 |
| Hpy188III | TCNNGA | 7 cut(s) | 127, 276, 343, 528, 571, 799, 816 |
| Hpy8I | GTNNAC | 2 cut(s) | 662, 673 |
| HpyAV | CCTTC | 6 cut(s) | 187, 217, 417, 490, 745, 868 |
| HpyCH4III | ACNGT | 2 cut(s) | 611, 745 |
| HpyCH4IV | ACGT | 4 cut(s) | 82, 600, 627, 954 |
| HpyCH4V | TGCA | 3 cut(s) | 357, 625, 835 |
| HpyF3I | CTNAG | 4 cut(s) | 128, 224, 328, 649 |
| HpySE526I | ACGT | 4 cut(s) | 82, 600, 627, 954 |
| Hsp92II | CATG | 2 cut(s) | 487, 618 |
| Ksp22I | TGATCA | 3 cut(s) | 94, 460, 889 |
| Kzo9I | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| LmnI | GCTCC | 2 cut(s) | 258, 409 |
| LpnPI | CCDG | 7 cut(s) | 140, 289, 323, 414, 513, 563, 736 |
| Lsp1109I | GCAGC | 3 cut(s) | 512, 527, 609 |
| LweI | GCATC | 2 cut(s) | 676, 909 |
| MaeI | CTAG | 2 cut(s) | 824, 966 |
| MaeII | ACGT | 4 cut(s) | 82, 600, 627, 954 |
| MaeIII | GTNAC | 1 cut(s) | 440 |
| MalI | GATC | 5 cut(s) | 96, 168, 462, 814, 891 |
| MboI | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| MboII | GAAGA | 6 cut(s) | 63, 78, 115, 248, 286, 706 |
| MfeI | CAATTG | 3 cut(s) | 264, 285, 642 |
| MhlI | GDGCHC | 2 cut(s) | 255, 723 |
| MlyI | GAGTC | 3 cut(s) | 281, 662, 906 |
| MseI | TTAA | 4 cut(s) | 156, 762, 860, 866 |
| MspI | CCGG | 2 cut(s) | 550, 723 |
| MspR9I | CCNGG | 1 cut(s) | 723 |
| MunI | CAATTG | 3 cut(s) | 264, 285, 642 |
| NciI | CCSGG | 1 cut(s) | 723 |
| NdeI | CATATG | 1 cut(s) | 713 |
| NdeII | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| NlaIII | CATG | 2 cut(s) | 487, 618 |
| NlaIV | GGNNCC | 3 cut(s) | 405, 720, 721 |
| NmeAIII | GCCGAG | 1 cut(s) | 715 |
| NmuCI | GTSAC | 1 cut(s) | 440 |
| PceI | AGGCCT | 1 cut(s) | 822 |
| PfeI | GAWTC | 1 cut(s) | 962 |
| PkrI | GCNGC | 3 cut(s) | 502, 517, 624 |
| PleI | GAGTC | 3 cut(s) | 280, 661, 905 |
| PpsI | GAGTC | 3 cut(s) | 280, 661, 905 |
| Ppu21I | YACGTR | 1 cut(s) | 601 |
| PsiI | TTATAA | 1 cut(s) | 908 |
| Psp124BI | GAGCTC | 1 cut(s) | 255 |
| PspN4I | GGNNCC | 3 cut(s) | 405, 720, 721 |
| PspOMI | GGGCCC | 1 cut(s) | 719 |
| PspPI | GGNCC | 3 cut(s) | 670, 719, 720 |
| PstI | CTGCAG | 1 cut(s) | 359 |
| RsaI | GTAC | 3 cut(s) | 176, 417, 554 |
| RsaNI | GTAC | 3 cut(s) | 175, 416, 553 |
| SacI | GAGCTC | 1 cut(s) | 255 |
| SaqAI | TTAA | 4 cut(s) | 156, 762, 860, 866 |
| SatI | GCNGC | 3 cut(s) | 501, 516, 623 |
| Sau3AI | GATC | 5 cut(s) | 94, 166, 460, 812, 889 |
| Sau96I | GGNCC | 3 cut(s) | 670, 719, 720 |
| SchI | GAGTC | 3 cut(s) | 281, 662, 906 |
| ScrFI | CCNGG | 1 cut(s) | 723 |
| SduI | GDGCHC | 2 cut(s) | 255, 723 |
| SfaNI | GCATC | 2 cut(s) | 676, 909 |
| SfcI | CTRYAG | 1 cut(s) | 355 |
| SinI | GGWCC | 1 cut(s) | 670 |
| SmlI | CTYRAG | 2 cut(s) | 316, 506 |
| SmoI | CTYRAG | 2 cut(s) | 316, 506 |
| SseBI | AGGCCT | 1 cut(s) | 822 |
| SspMI | CTAG | 2 cut(s) | 824, 966 |
| SstI | GAGCTC | 1 cut(s) | 255 |
| StuI | AGGCCT | 1 cut(s) | 822 |
| StyD4I | CCNGG | 1 cut(s) | 721 |
| TaaI | ACNGT | 2 cut(s) | 611, 745 |
| TaiI | ACGT | 4 cut(s) | 85, 603, 630, 957 |
| TaqI | TCGA | 2 cut(s) | 136, 540 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 962 |
| Tru1I | TTAA | 4 cut(s) | 156, 762, 860, 866 |
| Tru9I | TTAA | 4 cut(s) | 156, 762, 860, 866 |
| TseFI | GTSAC | 1 cut(s) | 440 |
| TseI | GCWGC | 3 cut(s) | 500, 515, 622 |
| Tsp45I | GTSAC | 1 cut(s) | 440 |
| TspDTI | ATGAA | 3 cut(s) | 54, 348, 603 |
| VpaK11BI | GGWCC | 1 cut(s) | 670 |
| XapI | RAATTY | 3 cut(s) | 563, 805, 1019 |
| XmiI | GTMKAC | 1 cut(s) | 661 |
| XspI | CTAG | 2 cut(s) | 824, 966 |