TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 158 - 241 | 2.3e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 80 |
| AciI | CCGC | 1 cut(s) | 223 |
| AclWI | GGATC | 7 cut(s) | 354, 387, 400, 426, 465, 792, 805 |
| AcsI | RAATTY | 5 cut(s) | 72, 269, 277, 293, 685 |
| AcuI | CTGAAG | 2 cut(s) | 182, 771 |
| AfaI | GTAC | 2 cut(s) | 138, 361 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 389, 739, 740, 830, 850 |
| AgsI | TTSAA | 7 cut(s) | 52, 88, 250, 425, 620, 706, 779 |
| AjnI | CCWGG | 2 cut(s) | 414, 451 |
| AluBI | AGCT | 1 cut(s) | 406 |
| AluI | AGCT | 1 cut(s) | 406 |
| Alw26I | GTCTC | 1 cut(s) | 829 |
| AlwI | GGATC | 7 cut(s) | 354, 387, 400, 426, 465, 792, 805 |
| AoxI | GGCC | 1 cut(s) | 146 |
| ApeKI | GCWGC | 2 cut(s) | 219, 666 |
| ApoI | RAATTY | 5 cut(s) | 72, 269, 277, 293, 685 |
| AseI | ATTAAT | 1 cut(s) | 486 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 756 |
| AspS9I | GGNCC | 1 cut(s) | 821 |
| AsuC2I | CCSGG | 2 cut(s) | 832, 917 |
| AsuHPI | GGTGA | 4 cut(s) | 371, 404, 820, 905 |
| AvaII | GGWCC | 1 cut(s) | 821 |
| BamHI | GGATCC | 2 cut(s) | 392, 797 |
| BbvI | GCAGC | 2 cut(s) | 231, 678 |
| BciT130I | CCWGG | 2 cut(s) | 416, 453 |
| BcnI | CCSGG | 2 cut(s) | 832, 917 |
| BcoDI | GTCTC | 1 cut(s) | 829 |
| BfaI | CTAG | 2 cut(s) | 197, 299 |
| BglII | AGATCT | 1 cut(s) | 655 |
| BisI | GCNGC | 3 cut(s) | 220, 223, 667 |
| BlsI | GCNGC | 3 cut(s) | 221, 224, 668 |
| Bme1390I | CCNGG | 4 cut(s) | 416, 453, 832, 917 |
| Bme18I | GGWCC | 1 cut(s) | 821 |
| BmgT120I | GGNCC | 1 cut(s) | 821 |
| BmiI | GGNNCC | 3 cut(s) | 394, 799, 813 |
| BmrFI | CCNGG | 4 cut(s) | 416, 453, 832, 917 |
| BmsI | GCATC | 5 cut(s) | 234, 419, 435, 585, 678 |
| BpmI | CTGGAG | 2 cut(s) | 487, 530 |
| BpuEI | CTTGAG | 1 cut(s) | 55 |
| BpuMI | CCSGG | 2 cut(s) | 832, 917 |
| BsaBI | GATNNNNATC | 1 cut(s) | 117 |
| BsaI | GGTCTC | 1 cut(s) | 829 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 389, 739, 740, 830, 850 |
| Bse1I | ACTGG | 3 cut(s) | 470, 577, 801 |
| Bse3DI | GCAATG | 1 cut(s) | 584 |
| Bse8I | GATNNNNATC | 1 cut(s) | 117 |
| BseBI | CCWGG | 2 cut(s) | 416, 453 |
| BseGI | GGATG | 7 cut(s) | 293, 434, 450, 551, 593, 700, 882 |
| BseJI | GATNNNNATC | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 389, 739, 740, 830, 850 |
| BseMI | GCAATG | 1 cut(s) | 584 |
| BseMII | CTCAG | 1 cut(s) | 141 |
| BseNI | ACTGG | 3 cut(s) | 470, 577, 801 |
| BseXI | GCAGC | 2 cut(s) | 231, 678 |
| BshFI | GGCC | 1 cut(s) | 148 |
| BsiSI | CCGG | 2 cut(s) | 831, 916 |
| BslFI | GGGAC | 1 cut(s) | 758 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 389, 739, 740, 830, 850 |
| BsmAI | GTCTC | 1 cut(s) | 829 |
| BsmFI | GGGAC | 1 cut(s) | 758 |
| BsmI | GAATGC | 2 cut(s) | 50, 510 |
| BsnI | GGCC | 1 cut(s) | 148 |
| Bso31I | GGTCTC | 1 cut(s) | 829 |
| Bsp1407I | TGTACA | 1 cut(s) | 359 |
| Bsp143I | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| BspACI | CCGC | 1 cut(s) | 223 |
| BspANI | GGCC | 1 cut(s) | 148 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BspLI | GGNNCC | 3 cut(s) | 394, 799, 813 |
| BspPI | GGATC | 7 cut(s) | 354, 387, 400, 426, 465, 792, 805 |
| BspTNI | GGTCTC | 1 cut(s) | 829 |
| BsrDI | GCAATG | 1 cut(s) | 584 |
| BsrGI | TGTACA | 1 cut(s) | 359 |
| BsrI | ACTGG | 3 cut(s) | 470, 577, 801 |
| BssMI | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| Bst2UI | CCWGG | 2 cut(s) | 416, 453 |
| Bst4CI | ACNGT | 3 cut(s) | 96, 788, 821 |
| Bst6I | CTCTTC | 1 cut(s) | 615 |
| BstAUI | TGTACA | 1 cut(s) | 359 |
| BstDEI | CTNAG | 4 cut(s) | 150, 206, 334, 350 |
| BstF5I | GGATG | 7 cut(s) | 293, 434, 450, 551, 593, 700, 882 |
| BstKTI | GATC | 6 cut(s) | 349, 395, 421, 473, 658, 800 |
| BstMAI | GTCTC | 1 cut(s) | 829 |
| BstMBI | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| BstNI | CCWGG | 2 cut(s) | 416, 453 |
| BstSCI | CCNGG | 4 cut(s) | 414, 451, 830, 915 |
| BstV1I | GCAGC | 2 cut(s) | 231, 678 |
| BstX2I | RGATCY | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 808 |
| BstYI | RGATCY | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| BsuRI | GGCC | 1 cut(s) | 148 |
| BtsCI | GGATG | 7 cut(s) | 293, 434, 450, 551, 593, 700, 882 |
| BtsIMutI | CAGTG | 2 cut(s) | 158, 570 |
| Cfr13I | GGNCC | 1 cut(s) | 821 |
| CseI | GACGC | 1 cut(s) | 548 |
| Csp6I | GTAC | 2 cut(s) | 137, 360 |
| CviAII | CATG | 3 cut(s) | 256, 547, 635 |
| CviJI | RGCY | 6 cut(s) | 148, 222, 309, 327, 406, 814 |
| CviKI_1 | RGCY | 6 cut(s) | 148, 222, 309, 327, 406, 814 |
| CviQI | GTAC | 2 cut(s) | 137, 360 |
| DdeI | CTNAG | 4 cut(s) | 150, 206, 334, 350 |
| DpnI | GATC | 6 cut(s) | 348, 394, 420, 472, 657, 799 |
| DpnII | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| DraI | TTTAAA | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 1 cut(s) | 615 |
| EarI | CTCTTC | 1 cut(s) | 615 |
| Eco31I | GGTCTC | 1 cut(s) | 829 |
| Eco32I | GATATC | 1 cut(s) | 605 |
| Eco47I | GGWCC | 1 cut(s) | 821 |
| Eco57I | CTGAAG | 2 cut(s) | 182, 771 |
| EcoRII | CCWGG | 2 cut(s) | 414, 451 |
| EcoRV | GATATC | 1 cut(s) | 605 |
| FaeI | CATG | 3 cut(s) | 259, 550, 638 |
| FaqI | GGGAC | 1 cut(s) | 758 |
| FatI | CATG | 3 cut(s) | 255, 546, 634 |
| Fnu4HI | GCNGC | 3 cut(s) | 220, 223, 667 |
| FokI | GGATG | 7 cut(s) | 300, 441, 457, 538, 580, 707, 869 |
| Fsp4HI | GCNGC | 3 cut(s) | 220, 223, 667 |
| FspBI | CTAG | 2 cut(s) | 197, 299 |
| GluI | GCNGC | 3 cut(s) | 220, 223, 667 |
| GsuI | CTGGAG | 2 cut(s) | 487, 530 |
| HaeIII | GGCC | 1 cut(s) | 148 |
| HapII | CCGG | 2 cut(s) | 831, 916 |
| HgaI | GACGC | 1 cut(s) | 548 |
| Hin1II | CATG | 3 cut(s) | 259, 550, 638 |
| HincII | GTYRAC | 1 cut(s) | 463 |
| HindII | GTYRAC | 1 cut(s) | 463 |
| HindIII | AAGCTT | 1 cut(s) | 404 |
| HinfI | GANTC | 6 cut(s) | 37, 124, 246, 376, 729, 746 |
| HpaII | CCGG | 2 cut(s) | 831, 916 |
| HphI | GGTGA | 4 cut(s) | 371, 404, 820, 905 |
| Hpy166II | GTNNAC | 3 cut(s) | 158, 412, 463 |
| Hpy188I | TCNGA | 4 cut(s) | 123, 267, 444, 751 |
| Hpy188III | TCNNGA | 6 cut(s) | 41, 250, 321, 344, 422, 521 |
| Hpy8I | GTNNAC | 3 cut(s) | 158, 412, 463 |
| HpyAV | CCTTC | 4 cut(s) | 236, 393, 419, 600 |
| HpyCH4III | ACNGT | 3 cut(s) | 96, 788, 821 |
| HpyCH4IV | ACGT | 1 cut(s) | 232 |
| HpyCH4V | TGCA | 4 cut(s) | 219, 501, 666, 682 |
| HpyF3I | CTNAG | 4 cut(s) | 150, 206, 334, 350 |
| HpySE526I | ACGT | 1 cut(s) | 232 |
| Hsp92II | CATG | 3 cut(s) | 259, 550, 638 |
| Kzo9I | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| LmnI | GCTCC | 1 cut(s) | 811 |
| Lsp1109I | GCAGC | 2 cut(s) | 231, 678 |
| LweI | GCATC | 5 cut(s) | 234, 419, 435, 585, 678 |
| MaeI | CTAG | 2 cut(s) | 197, 299 |
| MaeII | ACGT | 1 cut(s) | 232 |
| MaeIII | GTNAC | 1 cut(s) | 630 |
| MalI | GATC | 6 cut(s) | 348, 394, 420, 472, 657, 799 |
| MboI | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| MboII | GAAGA | 3 cut(s) | 32, 385, 632 |
| MflI | RGATCY | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| MlyI | GAGTC | 2 cut(s) | 46, 740 |
| MmeI | TCCRAC | 3 cut(s) | 370, 606, 785 |
| MnlI | CCTC | 7 cut(s) | 184, 277, 407, 485, 659, 685, 871 |
| MroXI | GAANNNNTTC | 1 cut(s) | 756 |
| MseI | TTAA | 8 cut(s) | 69, 141, 183, 275, 368, 486, 492, 612 |
| MslI | CAYNNNNRTG | 2 cut(s) | 639, 891 |
| MspI | CCGG | 2 cut(s) | 831, 916 |
| MspR9I | CCNGG | 4 cut(s) | 416, 453, 832, 917 |
| Mva1269I | GAATGC | 2 cut(s) | 50, 510 |
| MvaI | CCWGG | 2 cut(s) | 416, 453 |
| NciI | CCSGG | 2 cut(s) | 832, 917 |
| NdeII | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| NlaIII | CATG | 3 cut(s) | 259, 550, 638 |
| NlaIV | GGNNCC | 3 cut(s) | 394, 799, 813 |
| PctI | GAATGC | 2 cut(s) | 50, 510 |
| PdmI | GAANNNNTTC | 1 cut(s) | 756 |
| PfeI | GAWTC | 4 cut(s) | 124, 246, 376, 729 |
| PkrI | GCNGC | 3 cut(s) | 221, 224, 668 |
| PleI | GAGTC | 2 cut(s) | 45, 740 |
| PpsI | GAGTC | 2 cut(s) | 45, 740 |
| PshBI | ATTAAT | 1 cut(s) | 486 |
| PsiI | TTATAA | 1 cut(s) | 80 |
| Psp6I | CCWGG | 2 cut(s) | 414, 451 |
| PspGI | CCWGG | 2 cut(s) | 414, 451 |
| PspN4I | GGNNCC | 3 cut(s) | 394, 799, 813 |
| PspPI | GGNCC | 1 cut(s) | 821 |
| PsuI | RGATCY | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| RsaI | GTAC | 2 cut(s) | 138, 361 |
| RsaNI | GTAC | 2 cut(s) | 137, 360 |
| RseI | CAYNNNNRTG | 2 cut(s) | 639, 891 |
| SaqAI | TTAA | 8 cut(s) | 69, 141, 183, 275, 368, 486, 492, 612 |
| SatI | GCNGC | 3 cut(s) | 220, 223, 667 |
| Sau3AI | GATC | 6 cut(s) | 346, 392, 418, 470, 655, 797 |
| Sau96I | GGNCC | 1 cut(s) | 821 |
| SchI | GAGTC | 2 cut(s) | 46, 740 |
| ScrFI | CCNGG | 4 cut(s) | 416, 453, 832, 917 |
| SfaNI | GCATC | 5 cut(s) | 234, 419, 435, 585, 678 |
| SinI | GGWCC | 1 cut(s) | 821 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 639, 891 |
| SmlI | CTYRAG | 1 cut(s) | 34 |
| SmoI | CTYRAG | 1 cut(s) | 34 |
| SsiI | CCGC | 1 cut(s) | 223 |
| SspMI | CTAG | 2 cut(s) | 197, 299 |
| StyD4I | CCNGG | 4 cut(s) | 414, 451, 830, 915 |
| TaaI | ACNGT | 3 cut(s) | 96, 788, 821 |
| TaiI | ACGT | 1 cut(s) | 235 |
| TaqI | TCGA | 1 cut(s) | 202 |
| TatI | WGTACW | 1 cut(s) | 359 |
| TauI | GCSGC | 1 cut(s) | 225 |
| TfiI | GAWTC | 4 cut(s) | 124, 246, 376, 729 |
| Tru1I | TTAA | 8 cut(s) | 69, 141, 183, 275, 368, 486, 492, 612 |
| Tru9I | TTAA | 8 cut(s) | 69, 141, 183, 275, 368, 486, 492, 612 |
| TscAI | CASTG | 2 cut(s) | 165, 577 |
| TseI | GCWGC | 2 cut(s) | 219, 666 |
| TspDTI | ATGAA | 4 cut(s) | 554, 582, 690, 860 |
| TspGWI | ACGGA | 1 cut(s) | 810 |
| TspRI | CASTG | 2 cut(s) | 165, 577 |
| VpaK11BI | GGWCC | 1 cut(s) | 821 |
| VspI | ATTAAT | 1 cut(s) | 486 |
| XapI | RAATTY | 5 cut(s) | 72, 269, 277, 293, 685 |
| XmnI | GAANNNNTTC | 1 cut(s) | 756 |
| XspI | CTAG | 2 cut(s) | 197, 299 |