TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Remorin_C | PF03763 | 50 - 150 | 1e-28 | Remorin, C-terminal region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 101 |
| Acc36I | ACCTGC | 1 cut(s) | 101 |
| AcoI | YGGCCR | 1 cut(s) | 436 |
| AfaI | GTAC | 2 cut(s) | 75, 305 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 41 |
| AgsI | TTSAA | 2 cut(s) | 254, 374 |
| AluBI | AGCT | 3 cut(s) | 125, 332, 434 |
| AluI | AGCT | 3 cut(s) | 125, 332, 434 |
| AoxI | GGCC | 1 cut(s) | 436 |
| ApeKI | GCWGC | 4 cut(s) | 83, 234, 259, 431 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 113, 145 |
| AspLEI | GCGC | 2 cut(s) | 234, 259 |
| BalI | TGGCCA | 1 cut(s) | 438 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 287, 319 |
| BbvI | GCAGC | 4 cut(s) | 70, 246, 271, 443 |
| BccI | CCATC | 4 cut(s) | 34, 60, 361, 406 |
| BfaI | CTAG | 1 cut(s) | 284 |
| BfuAI | ACCTGC | 1 cut(s) | 101 |
| BisI | GCNGC | 4 cut(s) | 84, 235, 260, 432 |
| BlsI | GCNGC | 4 cut(s) | 85, 236, 261, 433 |
| BmiI | GGNNCC | 1 cut(s) | 49 |
| BmsI | GCATC | 2 cut(s) | 97, 306 |
| BpmI | CTGGAG | 1 cut(s) | 18 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 41 |
| BseGI | GGATG | 2 cut(s) | 112, 369 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BseMII | CTCAG | 1 cut(s) | 408 |
| BseRI | GAGGAG | 3 cut(s) | 12, 290, 422 |
| BseXI | GCAGC | 4 cut(s) | 70, 246, 271, 443 |
| BsgI | GTGCAG | 1 cut(s) | 450 |
| BshFI | GGCC | 1 cut(s) | 438 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BsnI | GGCC | 1 cut(s) | 438 |
| BspANI | GGCC | 1 cut(s) | 438 |
| BspCNI | CTCAG | 1 cut(s) | 409 |
| BspLI | GGNNCC | 1 cut(s) | 49 |
| BspMI | ACCTGC | 1 cut(s) | 101 |
| Bst4CI | ACNGT | 1 cut(s) | 428 |
| Bst6I | CTCTTC | 2 cut(s) | 348, 353 |
| BstC8I | GCNNGC | 3 cut(s) | 239, 243, 436 |
| BstDEI | CTNAG | 1 cut(s) | 417 |
| BstF5I | GGATG | 2 cut(s) | 112, 369 |
| BstHHI | GCGC | 2 cut(s) | 234, 259 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 17, 89, 116, 238 |
| BstNSI | RCATGY | 1 cut(s) | 249 |
| BstV1I | GCAGC | 4 cut(s) | 70, 246, 271, 443 |
| BsuRI | GGCC | 1 cut(s) | 438 |
| BtgZI | GCGATG | 1 cut(s) | 53 |
| BtsCI | GGATG | 2 cut(s) | 112, 369 |
| BveI | ACCTGC | 1 cut(s) | 101 |
| Cac8I | GCNNGC | 3 cut(s) | 239, 243, 436 |
| CfoI | GCGC | 2 cut(s) | 234, 259 |
| Csp6I | GTAC | 2 cut(s) | 74, 304 |
| CviAII | CATG | 5 cut(s) | 68, 80, 159, 246, 465 |
| CviJI | RGCY | 8 cut(s) | 5, 11, 97, 125, 332, 416, 434, 438 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 11, 97, 125, 332, 416, 434, 438 |
| CviQI | GTAC | 2 cut(s) | 74, 304 |
| DdeI | CTNAG | 1 cut(s) | 417 |
| EaeI | YGGCCR | 1 cut(s) | 436 |
| Eam1104I | CTCTTC | 2 cut(s) | 348, 353 |
| EarI | CTCTTC | 2 cut(s) | 348, 353 |
| FaeI | CATG | 5 cut(s) | 71, 83, 162, 249, 468 |
| FaiI | YATR | 8 cut(s) | 69, 81, 160, 247, 273, 342, 441, 466 |
| FatI | CATG | 5 cut(s) | 67, 79, 158, 245, 464 |
| Fnu4HI | GCNGC | 4 cut(s) | 84, 235, 260, 432 |
| FokI | GGATG | 2 cut(s) | 119, 376 |
| Fsp4HI | GCNGC | 4 cut(s) | 84, 235, 260, 432 |
| FspBI | CTAG | 1 cut(s) | 284 |
| GlaI | GCGC | 2 cut(s) | 233, 258 |
| GluI | GCNGC | 4 cut(s) | 84, 235, 260, 432 |
| GsuI | CTGGAG | 1 cut(s) | 18 |
| HaeIII | GGCC | 1 cut(s) | 438 |
| HhaI | GCGC | 2 cut(s) | 234, 259 |
| Hin1II | CATG | 5 cut(s) | 71, 83, 162, 249, 468 |
| Hin6I | GCGC | 2 cut(s) | 232, 257 |
| HinP1I | GCGC | 2 cut(s) | 232, 257 |
| HincII | GTYRAC | 1 cut(s) | 132 |
| HindII | GTYRAC | 1 cut(s) | 132 |
| HindIII | AAGCTT | 1 cut(s) | 123 |
| Hpy166II | GTNNAC | 1 cut(s) | 132 |
| Hpy188III | TCNNGA | 1 cut(s) | 477 |
| Hpy8I | GTNNAC | 1 cut(s) | 132 |
| HpyAV | CCTTC | 3 cut(s) | 24, 169, 289 |
| HpyCH4III | ACNGT | 1 cut(s) | 428 |
| HpyCH4IV | ACGT | 2 cut(s) | 224, 394 |
| HpyCH4V | TGCA | 5 cut(s) | 92, 110, 319, 380, 431 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 17, 89, 116, 238 |
| HpyF3I | CTNAG | 1 cut(s) | 417 |
| HpySE526I | ACGT | 2 cut(s) | 224, 394 |
| Hsp92II | CATG | 5 cut(s) | 71, 83, 162, 249, 468 |
| HspAI | GCGC | 2 cut(s) | 232, 257 |
| LmnI | GCTCC | 3 cut(s) | 25, 91, 229 |
| LpnPI | CCDG | 4 cut(s) | 48, 96, 102, 420 |
| Lsp1109I | GCAGC | 4 cut(s) | 70, 246, 271, 443 |
| LweI | GCATC | 2 cut(s) | 97, 306 |
| MaeI | CTAG | 1 cut(s) | 284 |
| MaeII | ACGT | 2 cut(s) | 224, 394 |
| MaeIII | GTNAC | 1 cut(s) | 459 |
| MboII | GAAGA | 6 cut(s) | 176, 304, 325, 365, 370, 401 |
| MlsI | TGGCCA | 1 cut(s) | 438 |
| MluNI | TGGCCA | 1 cut(s) | 438 |
| MmeI | TCCRAC | 1 cut(s) | 199 |
| MnlI | CCTC | 6 cut(s) | 33, 42, 108, 268, 354, 400 |
| Mox20I | TGGCCA | 1 cut(s) | 438 |
| MscI | TGGCCA | 1 cut(s) | 438 |
| MseI | TTAA | 1 cut(s) | 149 |
| Msp20I | TGGCCA | 1 cut(s) | 438 |
| MspA1I | CMGCKG | 1 cut(s) | 434 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 17, 89, 116, 238 |
| NlaIII | CATG | 5 cut(s) | 71, 83, 162, 249, 468 |
| NlaIV | GGNNCC | 1 cut(s) | 49 |
| NspI | RCATGY | 1 cut(s) | 249 |
| PaqCI | CACCTGC | 1 cut(s) | 101 |
| PkrI | GCNGC | 4 cut(s) | 85, 236, 261, 433 |
| PspN4I | GGNNCC | 1 cut(s) | 49 |
| PvuII | CAGCTG | 1 cut(s) | 434 |
| RsaI | GTAC | 2 cut(s) | 75, 305 |
| RsaNI | GTAC | 2 cut(s) | 74, 304 |
| SaqAI | TTAA | 1 cut(s) | 149 |
| SatI | GCNGC | 4 cut(s) | 84, 235, 260, 432 |
| SetI | ASST | 7 cut(s) | 115, 127, 227, 334, 397, 405, 436 |
| SfaNI | GCATC | 2 cut(s) | 97, 306 |
| SmlI | CTYRAG | 1 cut(s) | 6 |
| SmoI | CTYRAG | 1 cut(s) | 6 |
| SspMI | CTAG | 1 cut(s) | 284 |
| TaaI | ACNGT | 1 cut(s) | 428 |
| TaiI | ACGT | 2 cut(s) | 227, 397 |
| TaqI | TCGA | 1 cut(s) | 100 |
| TatI | WGTACW | 1 cut(s) | 303 |
| Tru1I | TTAA | 1 cut(s) | 149 |
| Tru9I | TTAA | 1 cut(s) | 149 |
| TseI | GCWGC | 4 cut(s) | 83, 234, 259, 431 |
| TspDTI | ATGAA | 2 cut(s) | 402, 461 |
| XceI | RCATGY | 1 cut(s) | 249 |
| XspI | CTAG | 1 cut(s) | 284 |