TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_Zer-1 | PF25013 | 163 - 289 | 1.9e-06 | Zer-1-like, Leucine-rich repeats |
| LRR_14 | PF23598 | 170 - 242 | 6.5e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 213 - 299 | 1.6e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 238 - 298 | 1e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 638 |
| AccII | CGCG | 1 cut(s) | 659 |
| AciI | CCGC | 1 cut(s) | 1020 |
| AclWI | GGATC | 3 cut(s) | 312, 577, 804 |
| AcsI | RAATTY | 6 cut(s) | 211, 322, 470, 693, 856, 899 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 275 |
| AflIII | ACRYGT | 1 cut(s) | 227 |
| AgsI | TTSAA | 5 cut(s) | 295, 376, 514, 558, 788 |
| AhlI | ACTAGT | 1 cut(s) | 892 |
| AjnI | CCWGG | 2 cut(s) | 688, 1000 |
| AluBI | AGCT | 3 cut(s) | 160, 463, 958 |
| AluI | AGCT | 3 cut(s) | 160, 463, 958 |
| Alw21I | GWGCWC | 1 cut(s) | 162 |
| AlwI | GGATC | 3 cut(s) | 312, 577, 804 |
| AoxI | GGCC | 2 cut(s) | 101, 781 |
| ApeKI | GCWGC | 3 cut(s) | 387, 837, 882 |
| ApoI | RAATTY | 6 cut(s) | 211, 322, 470, 693, 856, 899 |
| AseI | ATTAAT | 1 cut(s) | 1029 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 212, 726 |
| AspLEI | GCGC | 1 cut(s) | 639 |
| AsuHPI | GGTGA | 1 cut(s) | 1016 |
| BanII | GRGCYC | 1 cut(s) | 162 |
| BbsI | GAAGAC | 1 cut(s) | 582 |
| Bbv12I | GWGCWC | 1 cut(s) | 162 |
| BbvI | GCAGC | 3 cut(s) | 374, 849, 869 |
| BccI | CCATC | 4 cut(s) | 136, 487, 700, 926 |
| BceAI | ACGGC | 2 cut(s) | 162, 400 |
| BciT130I | CCWGG | 2 cut(s) | 690, 1002 |
| BcuI | ACTAGT | 1 cut(s) | 892 |
| BfaI | CTAG | 5 cut(s) | 572, 587, 731, 893, 959 |
| BisI | GCNGC | 3 cut(s) | 388, 838, 883 |
| BlsI | GCNGC | 3 cut(s) | 389, 839, 884 |
| Bme1390I | CCNGG | 2 cut(s) | 690, 1002 |
| BmiI | GGNNCC | 1 cut(s) | 336 |
| BmrFI | CCNGG | 2 cut(s) | 690, 1002 |
| BmsI | GCATC | 3 cut(s) | 553, 633, 971 |
| BoxI | GACNNNNGTC | 1 cut(s) | 177 |
| BpiI | GAAGAC | 1 cut(s) | 582 |
| BpmI | CTGGAG | 1 cut(s) | 78 |
| BpuEI | CTTGAG | 3 cut(s) | 202, 485, 655 |
| BsaAI | YACGTR | 1 cut(s) | 230 |
| BsaBI | GATNNNNATC | 1 cut(s) | 513 |
| BsaJI | CCNNGG | 2 cut(s) | 877, 1000 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 275 |
| Bse1I | ACTGG | 2 cut(s) | 82, 428 |
| Bse8I | GATNNNNATC | 1 cut(s) | 513 |
| BseBI | CCWGG | 2 cut(s) | 690, 1002 |
| BseDI | CCNNGG | 2 cut(s) | 877, 1000 |
| BseGI | GGATG | 3 cut(s) | 128, 544, 986 |
| BseJI | GATNNNNATC | 1 cut(s) | 513 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 275 |
| BseMII | CTCAG | 2 cut(s) | 25, 707 |
| BseNI | ACTGG | 2 cut(s) | 82, 428 |
| BseXI | GCAGC | 3 cut(s) | 374, 849, 869 |
| Bsh1236I | CGCG | 1 cut(s) | 659 |
| BshFI | GGCC | 2 cut(s) | 103, 783 |
| BsiHKAI | GWGCWC | 1 cut(s) | 162 |
| BslFI | GGGAC | 1 cut(s) | 216 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 275 |
| BsmFI | GGGAC | 1 cut(s) | 216 |
| BsnI | GGCC | 2 cut(s) | 103, 783 |
| Bsp1286I | GDGCHC | 1 cut(s) | 162 |
| Bsp143I | GATC | 3 cut(s) | 304, 582, 796 |
| BspACI | CCGC | 1 cut(s) | 1020 |
| BspANI | GGCC | 2 cut(s) | 103, 783 |
| BspCNI | CTCAG | 2 cut(s) | 24, 708 |
| BspFNI | CGCG | 1 cut(s) | 659 |
| BspHI | TCATGA | 1 cut(s) | 169 |
| BspLI | GGNNCC | 1 cut(s) | 336 |
| BspPI | GGATC | 3 cut(s) | 312, 577, 804 |
| BsrI | ACTGG | 2 cut(s) | 82, 428 |
| BssECI | CCNNGG | 2 cut(s) | 877, 1000 |
| BssMI | GATC | 3 cut(s) | 304, 582, 796 |
| Bst2UI | CCWGG | 2 cut(s) | 690, 1002 |
| Bst4CI | ACNGT | 1 cut(s) | 317 |
| Bst6I | CTCTTC | 1 cut(s) | 483 |
| BstBAI | YACGTR | 1 cut(s) | 230 |
| BstC8I | GCNNGC | 1 cut(s) | 461 |
| BstDEI | CTNAG | 2 cut(s) | 11, 716 |
| BstDSI | CCRYGG | 1 cut(s) | 877 |
| BstF5I | GGATG | 3 cut(s) | 128, 544, 986 |
| BstFNI | CGCG | 1 cut(s) | 659 |
| BstHHI | GCGC | 1 cut(s) | 639 |
| BstKTI | GATC | 3 cut(s) | 307, 585, 799 |
| BstMBI | GATC | 3 cut(s) | 304, 582, 796 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 100 |
| BstNI | CCWGG | 2 cut(s) | 690, 1002 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 177 |
| BstSCI | CCNGG | 2 cut(s) | 688, 1000 |
| BstUI | CGCG | 1 cut(s) | 659 |
| BstV1I | GCAGC | 3 cut(s) | 374, 849, 869 |
| BstV2I | GAAGAC | 1 cut(s) | 582 |
| BstX2I | RGATCY | 2 cut(s) | 304, 796 |
| BstYI | RGATCY | 2 cut(s) | 304, 796 |
| BsuRI | GGCC | 2 cut(s) | 103, 783 |
| BtgI | CCRYGG | 1 cut(s) | 877 |
| BtgZI | GCGATG | 1 cut(s) | 999 |
| BtsCI | GGATG | 3 cut(s) | 128, 544, 986 |
| BtsI | GCAGTG | 2 cut(s) | 599, 745 |
| BtsIMutI | CAGTG | 3 cut(s) | 599, 745, 982 |
| Cac8I | GCNNGC | 1 cut(s) | 461 |
| CciI | TCATGA | 1 cut(s) | 169 |
| CfoI | GCGC | 1 cut(s) | 639 |
| CseI | GACGC | 1 cut(s) | 665 |
| CviAII | CATG | 3 cut(s) | 140, 170, 834 |
| DdeI | CTNAG | 2 cut(s) | 11, 716 |
| DpnI | GATC | 3 cut(s) | 306, 584, 798 |
| DpnII | GATC | 3 cut(s) | 304, 582, 796 |
| Eam1104I | CTCTTC | 1 cut(s) | 483 |
| EarI | CTCTTC | 1 cut(s) | 483 |
| Ecl136II | GAGCTC | 1 cut(s) | 160 |
| Eco24I | GRGCYC | 1 cut(s) | 162 |
| Eco32I | GATATC | 1 cut(s) | 973 |
| Eco53kI | GAGCTC | 1 cut(s) | 160 |
| EcoICRI | GAGCTC | 1 cut(s) | 160 |
| EcoRI | GAATTC | 1 cut(s) | 693 |
| EcoRII | CCWGG | 2 cut(s) | 688, 1000 |
| EcoRV | GATATC | 1 cut(s) | 973 |
| EcoT38I | GRGCYC | 1 cut(s) | 162 |
| FaeI | CATG | 3 cut(s) | 143, 173, 837 |
| FaqI | GGGAC | 1 cut(s) | 216 |
| FatI | CATG | 3 cut(s) | 139, 169, 833 |
| Fnu4HI | GCNGC | 3 cut(s) | 388, 838, 883 |
| FokI | GGATG | 3 cut(s) | 115, 531, 993 |
| FriOI | GRGCYC | 1 cut(s) | 162 |
| Fsp4HI | GCNGC | 3 cut(s) | 388, 838, 883 |
| FspBI | CTAG | 5 cut(s) | 572, 587, 731, 893, 959 |
| FspI | TGCGCA | 1 cut(s) | 638 |
| GlaI | GCGC | 1 cut(s) | 638 |
| GluI | GCNGC | 3 cut(s) | 388, 838, 883 |
| GsuI | CTGGAG | 1 cut(s) | 78 |
| HaeIII | GGCC | 2 cut(s) | 103, 783 |
| HgaI | GACGC | 1 cut(s) | 665 |
| HhaI | GCGC | 1 cut(s) | 639 |
| Hin1II | CATG | 3 cut(s) | 143, 173, 837 |
| Hin6I | GCGC | 1 cut(s) | 637 |
| HinP1I | GCGC | 1 cut(s) | 637 |
| HincII | GTYRAC | 1 cut(s) | 382 |
| HindII | GTYRAC | 1 cut(s) | 382 |
| HindIII | AAGCTT | 1 cut(s) | 461 |
| HphI | GGTGA | 1 cut(s) | 1016 |
| Hpy166II | GTNNAC | 1 cut(s) | 382 |
| Hpy188I | TCNGA | 4 cut(s) | 14, 313, 478, 600 |
| Hpy188III | TCNNGA | 4 cut(s) | 57, 170, 338, 653 |
| Hpy8I | GTNNAC | 1 cut(s) | 382 |
| Hpy99I | CGWCG | 1 cut(s) | 183 |
| HpyCH4III | ACNGT | 1 cut(s) | 317 |
| HpyCH4IV | ACGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 8 cut(s) | 118, 143, 390, 459, 544, 813, 837, 853 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 100 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 716 |
| HpySE526I | ACGT | 1 cut(s) | 229 |
| Hsp92II | CATG | 3 cut(s) | 143, 173, 837 |
| HspAI | GCGC | 1 cut(s) | 637 |
| Kzo9I | GATC | 3 cut(s) | 304, 582, 796 |
| Lsp1109I | GCAGC | 3 cut(s) | 374, 849, 869 |
| LweI | GCATC | 3 cut(s) | 553, 633, 971 |
| MaeI | CTAG | 5 cut(s) | 572, 587, 731, 893, 959 |
| MaeII | ACGT | 1 cut(s) | 229 |
| MaeIII | GTNAC | 4 cut(s) | 359, 367, 740, 806 |
| MalI | GATC | 3 cut(s) | 306, 584, 798 |
| MboI | GATC | 3 cut(s) | 304, 582, 796 |
| MboII | GAAGA | 5 cut(s) | 16, 220, 500, 587, 715 |
| MfeI | CAATTG | 1 cut(s) | 765 |
| MflI | RGATCY | 2 cut(s) | 304, 796 |
| MhlI | GDGCHC | 1 cut(s) | 162 |
| MlyI | GAGTC | 1 cut(s) | 770 |
| MmeI | TCCRAC | 6 cut(s) | 102, 156, 282, 328, 774, 948 |
| MnlI | CCTC | 8 cut(s) | 81, 193, 325, 365, 460, 478, 728, 858 |
| MroXI | GAANNNNTTC | 2 cut(s) | 212, 726 |
| MseI | TTAA | 4 cut(s) | 239, 402, 897, 1029 |
| MspR9I | CCNGG | 2 cut(s) | 690, 1002 |
| MunI | CAATTG | 1 cut(s) | 765 |
| MvaI | CCWGG | 2 cut(s) | 690, 1002 |
| MvnI | CGCG | 1 cut(s) | 659 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 100 |
| NdeII | GATC | 3 cut(s) | 304, 582, 796 |
| NlaIII | CATG | 3 cut(s) | 143, 173, 837 |
| NlaIV | GGNNCC | 1 cut(s) | 336 |
| NmuCI | GTSAC | 2 cut(s) | 740, 806 |
| NsbI | TGCGCA | 1 cut(s) | 638 |
| PagI | TCATGA | 1 cut(s) | 169 |
| PdmI | GAANNNNTTC | 2 cut(s) | 212, 726 |
| PfeI | GAWTC | 9 cut(s) | 7, 183, 251, 282, 341, 351, 514, 601, 710 |
| PfoI | TCCNGGA | 1 cut(s) | 688 |
| PkrI | GCNGC | 3 cut(s) | 389, 839, 884 |
| PleI | GAGTC | 1 cut(s) | 769 |
| PpsI | GAGTC | 1 cut(s) | 769 |
| Ppu21I | YACGTR | 1 cut(s) | 230 |
| PshAI | GACNNNNGTC | 1 cut(s) | 177 |
| PshBI | ATTAAT | 1 cut(s) | 1029 |
| Psp124BI | GAGCTC | 1 cut(s) | 162 |
| Psp6I | CCWGG | 2 cut(s) | 688, 1000 |
| PspGI | CCWGG | 2 cut(s) | 688, 1000 |
| PspN4I | GGNNCC | 1 cut(s) | 336 |
| PsuI | RGATCY | 2 cut(s) | 304, 796 |
| SacI | GAGCTC | 1 cut(s) | 162 |
| SaqAI | TTAA | 4 cut(s) | 239, 402, 897, 1029 |
| SatI | GCNGC | 3 cut(s) | 388, 838, 883 |
| Sau3AI | GATC | 3 cut(s) | 304, 582, 796 |
| SchI | GAGTC | 1 cut(s) | 770 |
| ScrFI | CCNGG | 2 cut(s) | 690, 1002 |
| SduI | GDGCHC | 1 cut(s) | 162 |
| SfaNI | GCATC | 3 cut(s) | 553, 633, 971 |
| SmlI | CTYRAG | 3 cut(s) | 217, 464, 670 |
| SmoI | CTYRAG | 3 cut(s) | 217, 464, 670 |
| SpeI | ACTAGT | 1 cut(s) | 892 |
| SsiI | CCGC | 1 cut(s) | 1020 |
| SspI | AATATT | 1 cut(s) | 166 |
| SspMI | CTAG | 5 cut(s) | 572, 587, 731, 893, 959 |
| SstI | GAGCTC | 1 cut(s) | 162 |
| StyD4I | CCNGG | 2 cut(s) | 688, 1000 |
| TaaI | ACNGT | 1 cut(s) | 317 |
| TaiI | ACGT | 1 cut(s) | 232 |
| TaqI | TCGA | 1 cut(s) | 181 |
| TfiI | GAWTC | 9 cut(s) | 7, 183, 251, 282, 341, 351, 514, 601, 710 |
| Tru1I | TTAA | 4 cut(s) | 239, 402, 897, 1029 |
| Tru9I | TTAA | 4 cut(s) | 239, 402, 897, 1029 |
| TscAI | CASTG | 3 cut(s) | 599, 745, 982 |
| TseFI | GTSAC | 2 cut(s) | 740, 806 |
| TseI | GCWGC | 3 cut(s) | 387, 837, 882 |
| Tsp45I | GTSAC | 2 cut(s) | 740, 806 |
| TspDTI | ATGAA | 5 cut(s) | 17, 128, 158, 489, 716 |
| TspGWI | ACGGA | 6 cut(s) | 102, 220, 334, 347, 537, 866 |
| TspRI | CASTG | 3 cut(s) | 599, 745, 982 |
| VspI | ATTAAT | 1 cut(s) | 1029 |
| XapI | RAATTY | 6 cut(s) | 211, 322, 470, 693, 856, 899 |
| XmnI | GAANNNNTTC | 2 cut(s) | 212, 726 |
| XspI | CTAG | 5 cut(s) | 572, 587, 731, 893, 959 |