TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 37 - 199 | 8.4e-56 | TIR domain |
| TIR_2 | PF13676 | 39 - 134 | 3.2e-15 | TIR domain |
| ATPase_2 | PF01637 | 222 - 321 | 8.6e-06 | ATPase domain predominantly from Archaea |
| NB-ARC | PF00931 | 223 - 381 | 7.1e-24 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 452 - 526 | 4.3e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 718 - 803 | 6.7e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 740 - 802 | 3e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 799 - 959 | 4.7e-17 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 905 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 844, 2974 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2685 |
| AccI | GTMKAC | 4 cut(s) | 170, 658, 1074, 1401 |
| AccII | CGCG | 2 cut(s) | 2387, 3059 |
| AccIII | TCCGGA | 1 cut(s) | 2872 |
| AciI | CCGC | 1 cut(s) | 3059 |
| AclI | AACGTT | 2 cut(s) | 1042, 2889 |
| AclWI | GGATC | 3 cut(s) | 1286, 2040, 2922 |
| AcoI | YGGCCR | 3 cut(s) | 798, 1685, 1829 |
| AcuI | CTGAAG | 2 cut(s) | 187, 1987 |
| AfaI | GTAC | 6 cut(s) | 414, 551, 1185, 1978, 2047, 2698 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 318, 1474, 2286, 2685, 2944, 3168, 3230 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 665 |
| AjiI | CACGTC | 1 cut(s) | 952 |
| AjnI | CCWGG | 2 cut(s) | 718, 1194 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 624, 656, 2490, 2522 |
| Alw21I | GWGCWC | 2 cut(s) | 252, 879 |
| Alw26I | GTCTC | 6 cut(s) | 191, 548, 830, 852, 1305, 2851 |
| Alw44I | GTGCAC | 1 cut(s) | 875 |
| AlwI | GGATC | 3 cut(s) | 1286, 2040, 2922 |
| Aor13HI | TCCGGA | 1 cut(s) | 2872 |
| AoxI | GGCC | 7 cut(s) | 544, 716, 798, 1198, 1476, 1685, 1829 |
| ApaLI | GTGCAC | 1 cut(s) | 875 |
| ApeKI | GCWGC | 7 cut(s) | 4, 44, 47, 512, 1599, 2562, 3054 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1130 |
| AspLEI | GCGC | 1 cut(s) | 3059 |
| AspS9I | GGNCC | 5 cut(s) | 544, 716, 1198, 2311, 3184 |
| AsuHPI | GGTGA | 5 cut(s) | 83, 449, 1526, 1569, 2803 |
| AvaII | GGWCC | 2 cut(s) | 2311, 3184 |
| BaeGI | GKGCMC | 1 cut(s) | 879 |
| BalI | TGGCCA | 2 cut(s) | 1687, 1831 |
| BanII | GRGCYC | 1 cut(s) | 252 |
| BbsI | GAAGAC | 5 cut(s) | 109, 240, 283, 2789, 3009 |
| Bbv12I | GWGCWC | 2 cut(s) | 252, 879 |
| BbvI | GCAGC | 7 cut(s) | 16, 56, 59, 524, 1611, 2574, 3066 |
| BceAI | ACGGC | 2 cut(s) | 2329, 3146 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1850, 1884, 3145, 3179 |
| BciT130I | CCWGG | 2 cut(s) | 720, 1196 |
| BciVI | GTATCC | 2 cut(s) | 133, 2908 |
| BclI | TGATCA | 2 cut(s) | 88, 457 |
| BcoDI | GTCTC | 6 cut(s) | 191, 548, 830, 852, 1305, 2851 |
| BfaI | CTAG | 5 cut(s) | 963, 1421, 2315, 2372, 2622 |
| BfmI | CTRYAG | 2 cut(s) | 352, 2160 |
| BfuI | GTATCC | 2 cut(s) | 133, 2908 |
| BisI | GCNGC | 7 cut(s) | 5, 45, 48, 513, 1600, 2563, 3055 |
| BlsI | GCNGC | 7 cut(s) | 6, 46, 49, 514, 1601, 2564, 3056 |
| Bme1390I | CCNGG | 2 cut(s) | 720, 1196 |
| Bme18I | GGWCC | 2 cut(s) | 2311, 3184 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 665 |
| BmgBI | CACGTC | 1 cut(s) | 952 |
| BmgT120I | GGNCC | 5 cut(s) | 544, 716, 1198, 2311, 3184 |
| BmiI | GGNNCC | 6 cut(s) | 402, 717, 2064, 3123, 3186, 3235 |
| BmrFI | CCNGG | 2 cut(s) | 720, 1196 |
| BoxI | GACNNNNGTC | 1 cut(s) | 954 |
| BpiI | GAAGAC | 5 cut(s) | 109, 240, 283, 2789, 3009 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 484, 516, 1302, 1334, 2942, 2974 |
| BpmI | CTGGAG | 2 cut(s) | 1806, 2966 |
| BpuEI | CTTGAG | 4 cut(s) | 298, 524, 2213, 2251 |
| Bsa29I | ATCGAT | 1 cut(s) | 3179 |
| BsaI | GGTCTC | 1 cut(s) | 191 |
| BsaJI | CCNNGG | 5 cut(s) | 687, 1194, 1195, 2863, 2904 |
| BsaWI | WCCGGW | 1 cut(s) | 2872 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 222, 234, 252, 264, 533, 563 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 318, 1474, 2286, 2685, 2944, 3168, 3230 |
| Bse118I | RCCGGY | 1 cut(s) | 546 |
| Bse3DI | GCAATG | 1 cut(s) | 2784 |
| BseAI | TCCGGA | 1 cut(s) | 2872 |
| BseBI | CCWGG | 2 cut(s) | 720, 1196 |
| BseCI | ATCGAT | 1 cut(s) | 3179 |
| BseDI | CCNNGG | 5 cut(s) | 687, 1194, 1195, 2863, 2904 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 318, 1474, 2286, 2685, 2944, 3168, 3230 |
| BseMI | GCAATG | 1 cut(s) | 2784 |
| BseMII | CTCAG | 5 cut(s) | 113, 420, 910, 2031, 3078 |
| BseRI | GAGGAG | 6 cut(s) | 242, 243, 281, 554, 1268, 2963 |
| BseSI | GKGCMC | 1 cut(s) | 879 |
| BseXI | GCAGC | 7 cut(s) | 16, 56, 59, 524, 1611, 2574, 3066 |
| BseYI | CCCAGC | 1 cut(s) | 2748 |
| BsgI | GTGCAG | 1 cut(s) | 2906 |
| Bsh1236I | CGCG | 2 cut(s) | 2387, 3059 |
| BshFI | GGCC | 7 cut(s) | 546, 718, 800, 1200, 1478, 1687, 1831 |
| BshVI | ATCGAT | 1 cut(s) | 3179 |
| BsiHKAI | GWGCWC | 2 cut(s) | 252, 879 |
| BsiSI | CCGG | 2 cut(s) | 547, 2873 |
| BslFI | GGGAC | 2 cut(s) | 1944, 3170 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 318, 1474, 2286, 2685, 2944, 3168, 3230 |
| BsmAI | GTCTC | 6 cut(s) | 191, 548, 830, 852, 1305, 2851 |
| BsmFI | GGGAC | 2 cut(s) | 1944, 3170 |
| BsmI | GAATGC | 5 cut(s) | 1130, 1132, 1671, 1714, 2322 |
| BsnI | GGCC | 7 cut(s) | 546, 718, 800, 1200, 1478, 1687, 1831 |
| Bso31I | GGTCTC | 1 cut(s) | 191 |
| Bsp1286I | GDGCHC | 2 cut(s) | 252, 879 |
| Bsp13I | TCCGGA | 1 cut(s) | 2872 |
| Bsp1407I | TGTACA | 1 cut(s) | 1976 |
| Bsp143I | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| Bsp19I | CCATGG | 1 cut(s) | 2904 |
| BspACI | CCGC | 1 cut(s) | 3059 |
| BspANI | GGCC | 7 cut(s) | 546, 718, 800, 1200, 1478, 1687, 1831 |
| BspCNI | CTCAG | 5 cut(s) | 114, 419, 909, 2032, 3079 |
| BspDI | ATCGAT | 1 cut(s) | 3179 |
| BspEI | TCCGGA | 1 cut(s) | 2872 |
| BspFNI | CGCG | 2 cut(s) | 2387, 3059 |
| BspLI | GGNNCC | 6 cut(s) | 402, 717, 2064, 3123, 3186, 3235 |
| BspMAI | CTGCAG | 1 cut(s) | 356 |
| BspPI | GGATC | 3 cut(s) | 1286, 2040, 2922 |
| BspQI | GCTCTTC | 1 cut(s) | 2979 |
| BspTNI | GGTCTC | 1 cut(s) | 191 |
| BsrDI | GCAATG | 1 cut(s) | 2784 |
| BsrFI | RCCGGY | 1 cut(s) | 546 |
| BsrGI | TGTACA | 1 cut(s) | 1976 |
| BssAI | RCCGGY | 1 cut(s) | 546 |
| BssECI | CCNNGG | 5 cut(s) | 687, 1194, 1195, 2863, 2904 |
| BssMI | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| BssNAI | GTATAC | 2 cut(s) | 171, 1075 |
| BssT1I | CCWWGG | 2 cut(s) | 687, 2904 |
| Bst1107I | GTATAC | 2 cut(s) | 171, 1075 |
| Bst2UI | CCWGG | 2 cut(s) | 720, 1196 |
| Bst4CI | ACNGT | 5 cut(s) | 881, 1608, 2114, 2701, 2832 |
| Bst6I | CTCTTC | 3 cut(s) | 2211, 2298, 2979 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1178 |
| BstAUI | TGTACA | 1 cut(s) | 1976 |
| BstC8I | GCNNGC | 5 cut(s) | 14, 1429, 2189, 2775, 2806 |
| BstDEI | CTNAG | 9 cut(s) | 122, 325, 406, 896, 979, 1739, 2040, 2246, 3087 |
| BstDSI | CCRYGG | 1 cut(s) | 2904 |
| BstFNI | CGCG | 2 cut(s) | 2387, 3059 |
| BstHHI | GCGC | 1 cut(s) | 3059 |
| BstKTI | GATC | 8 cut(s) | 91, 163, 460, 812, 1099, 1294, 2035, 2930 |
| BstMAI | GTCTC | 6 cut(s) | 191, 548, 830, 852, 1305, 2851 |
| BstMBI | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 13, 492, 1178, 1828, 2089, 2296, 3083 |
| BstNI | CCWGG | 2 cut(s) | 720, 1196 |
| BstNSI | RCATGY | 1 cut(s) | 1181 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 954 |
| BstSCI | CCNGG | 2 cut(s) | 718, 1194 |
| BstSFI | CTRYAG | 2 cut(s) | 352, 2160 |
| BstSLI | GKGCMC | 1 cut(s) | 879 |
| BstUI | CGCG | 2 cut(s) | 2387, 3059 |
| BstV1I | GCAGC | 7 cut(s) | 16, 56, 59, 524, 1611, 2574, 3066 |
| BstV2I | GAAGAC | 5 cut(s) | 109, 240, 283, 2789, 3009 |
| BstX2I | RGATCY | 3 cut(s) | 1291, 2032, 2927 |
| BstYI | RGATCY | 3 cut(s) | 1291, 2032, 2927 |
| BstZ17I | GTATAC | 2 cut(s) | 171, 1075 |
| Bsu15I | ATCGAT | 1 cut(s) | 3179 |
| BsuI | GTATCC | 2 cut(s) | 133, 2908 |
| BsuRI | GGCC | 7 cut(s) | 546, 718, 800, 1200, 1478, 1687, 1831 |
| BsuTUI | ATCGAT | 1 cut(s) | 3179 |
| BtgI | CCRYGG | 1 cut(s) | 2904 |
| BtgZI | GCGATG | 1 cut(s) | 3035 |
| BtrI | CACGTC | 1 cut(s) | 952 |
| BtsI | GCAGTG | 3 cut(s) | 2473, 2918, 3156 |
| Cac8I | GCNNGC | 5 cut(s) | 14, 1429, 2189, 2775, 2806 |
| CfoI | GCGC | 1 cut(s) | 3059 |
| Cfr10I | RCCGGY | 1 cut(s) | 546 |
| Cfr13I | GGNCC | 5 cut(s) | 544, 716, 1198, 2311, 3184 |
| ClaI | ATCGAT | 1 cut(s) | 3179 |
| CseI | GACGC | 1 cut(s) | 449 |
| Csp6I | GTAC | 6 cut(s) | 413, 550, 1184, 1977, 2046, 2697 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1664, 1699 |
| CviQI | GTAC | 6 cut(s) | 413, 550, 1184, 1977, 2046, 2697 |
| DdeI | CTNAG | 9 cut(s) | 122, 325, 406, 896, 979, 1739, 2040, 2246, 3087 |
| DpnI | GATC | 8 cut(s) | 90, 162, 459, 811, 1098, 1293, 2034, 2929 |
| DpnII | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| DraI | TTTAAA | 3 cut(s) | 1353, 1387, 1968 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 844, 2974 |
| DriI | GACNNNNNGTC | 1 cut(s) | 665 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 844, 2974 |
| EaeI | YGGCCR | 3 cut(s) | 798, 1685, 1829 |
| Eam1104I | CTCTTC | 3 cut(s) | 2211, 2298, 2979 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 665 |
| EarI | CTCTTC | 3 cut(s) | 2211, 2298, 2979 |
| Ecl136II | GAGCTC | 1 cut(s) | 250 |
| Eco130I | CCWWGG | 2 cut(s) | 687, 2904 |
| Eco147I | AGGCCT | 1 cut(s) | 1478 |
| Eco24I | GRGCYC | 1 cut(s) | 252 |
| Eco31I | GGTCTC | 1 cut(s) | 191 |
| Eco32I | GATATC | 2 cut(s) | 1372, 1701 |
| Eco47I | GGWCC | 2 cut(s) | 2311, 3184 |
| Eco53kI | GAGCTC | 1 cut(s) | 250 |
| Eco57I | CTGAAG | 2 cut(s) | 187, 1987 |
| EcoICRI | GAGCTC | 1 cut(s) | 250 |
| EcoO109I | RGGNCCY | 2 cut(s) | 716, 1198 |
| EcoRI | GAATTC | 1 cut(s) | 2868 |
| EcoRII | CCWGG | 2 cut(s) | 718, 1194 |
| EcoRV | GATATC | 2 cut(s) | 1372, 1701 |
| EcoT14I | CCWWGG | 2 cut(s) | 687, 2904 |
| EcoT22I | ATGCAT | 2 cut(s) | 1132, 1533 |
| EcoT38I | GRGCYC | 1 cut(s) | 252 |
| ErhI | CCWWGG | 2 cut(s) | 687, 2904 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 825, 857, 1380, 1412, 2239, 2271 |
| FaqI | GGGAC | 2 cut(s) | 1944, 3170 |
| FauNDI | CATATG | 2 cut(s) | 710, 1959 |
| FbaI | TGATCA | 2 cut(s) | 88, 457 |
| FblI | GTMKAC | 4 cut(s) | 170, 658, 1074, 1401 |
| Fnu4HI | GCNGC | 7 cut(s) | 5, 45, 48, 513, 1600, 2563, 3055 |
| FriOI | GRGCYC | 1 cut(s) | 252 |
| Fsp4HI | GCNGC | 7 cut(s) | 5, 45, 48, 513, 1600, 2563, 3055 |
| FspBI | CTAG | 5 cut(s) | 963, 1421, 2315, 2372, 2622 |
| GlaI | GCGC | 1 cut(s) | 3058 |
| GluI | GCNGC | 7 cut(s) | 5, 45, 48, 513, 1600, 2563, 3055 |
| GsaI | CCCAGC | 1 cut(s) | 2752 |
| GsuI | CTGGAG | 2 cut(s) | 1806, 2966 |
| HaeIII | GGCC | 7 cut(s) | 546, 718, 800, 1200, 1478, 1687, 1831 |
| HapII | CCGG | 2 cut(s) | 547, 2873 |
| HgaI | GACGC | 1 cut(s) | 449 |
| HhaI | GCGC | 1 cut(s) | 3059 |
| Hin6I | GCGC | 1 cut(s) | 3057 |
| HinP1I | GCGC | 1 cut(s) | 3057 |
| HincII | GTYRAC | 4 cut(s) | 670, 1627, 2110, 2824 |
| HindII | GTYRAC | 4 cut(s) | 670, 1627, 2110, 2824 |
| HindIII | AAGCTT | 6 cut(s) | 218, 1394, 1425, 1717, 1736, 2189 |
| HpaII | CCGG | 2 cut(s) | 547, 2873 |
| HphI | GGTGA | 5 cut(s) | 83, 449, 1526, 1569, 2803 |
| Hpy99I | CGWCG | 3 cut(s) | 290, 3001, 3167 |
| HpyAV | CCTTC | 6 cut(s) | 211, 618, 776, 884, 1211, 2456 |
| HpyCH4III | ACNGT | 5 cut(s) | 881, 1608, 2114, 2701, 2832 |
| HpyCH4IV | ACGT | 7 cut(s) | 237, 624, 634, 951, 1042, 1933, 2889 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 13, 492, 1178, 1828, 2089, 2296, 3083 |
| HpyF3I | CTNAG | 9 cut(s) | 122, 325, 406, 896, 979, 1739, 2040, 2246, 3087 |
| HpySE526I | ACGT | 7 cut(s) | 237, 624, 634, 951, 1042, 1933, 2889 |
| HspAI | GCGC | 1 cut(s) | 3057 |
| Kpn2I | TCCGGA | 1 cut(s) | 2872 |
| Ksp22I | TGATCA | 2 cut(s) | 88, 457 |
| Kzo9I | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| LguI | GCTCTTC | 1 cut(s) | 2979 |
| LmnI | GCTCC | 5 cut(s) | 255, 406, 492, 2590, 2875 |
| Lsp1109I | GCAGC | 7 cut(s) | 16, 56, 59, 524, 1611, 2574, 3066 |
| MaeI | CTAG | 5 cut(s) | 963, 1421, 2315, 2372, 2622 |
| MaeII | ACGT | 7 cut(s) | 237, 624, 634, 951, 1042, 1933, 2889 |
| MaeIII | GTNAC | 4 cut(s) | 437, 1575, 1904, 2468 |
| MalI | GATC | 8 cut(s) | 90, 162, 459, 811, 1098, 1293, 2034, 2929 |
| MboI | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| MfeI | CAATTG | 5 cut(s) | 261, 639, 741, 2493, 2979 |
| MflI | RGATCY | 3 cut(s) | 1291, 2032, 2927 |
| MhlI | GDGCHC | 2 cut(s) | 252, 879 |
| MlsI | TGGCCA | 2 cut(s) | 1687, 1831 |
| MluNI | TGGCCA | 2 cut(s) | 1687, 1831 |
| MlyI | GAGTC | 9 cut(s) | 278, 888, 964, 1583, 2386, 2498, 2731, 2853, 3098 |
| MmeI | TCCRAC | 4 cut(s) | 2010, 2056, 2289, 2654 |
| Mox20I | TGGCCA | 2 cut(s) | 1687, 1831 |
| Mph1103I | ATGCAT | 2 cut(s) | 1132, 1533 |
| MroI | TCCGGA | 1 cut(s) | 2872 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1130 |
| MscI | TGGCCA | 2 cut(s) | 1687, 1831 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1921, 2601 |
| Msp20I | TGGCCA | 2 cut(s) | 1687, 1831 |
| MspI | CCGG | 2 cut(s) | 547, 2873 |
| MspR9I | CCNGG | 2 cut(s) | 720, 1196 |
| MunI | CAATTG | 5 cut(s) | 261, 639, 741, 2493, 2979 |
| Mva1269I | GAATGC | 5 cut(s) | 1130, 1132, 1671, 1714, 2322 |
| MvaI | CCWGG | 2 cut(s) | 720, 1196 |
| MvnI | CGCG | 2 cut(s) | 2387, 3059 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 13, 492, 1178, 1828, 2089, 2296, 3083 |
| NcoI | CCATGG | 1 cut(s) | 2904 |
| NdeI | CATATG | 2 cut(s) | 710, 1959 |
| NdeII | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| NlaIV | GGNNCC | 6 cut(s) | 402, 717, 2064, 3123, 3186, 3235 |
| NmuCI | GTSAC | 3 cut(s) | 437, 1575, 2468 |
| NsiI | ATGCAT | 2 cut(s) | 1132, 1533 |
| NspI | RCATGY | 1 cut(s) | 1181 |
| PasI | CCCWGGG | 1 cut(s) | 1195 |
| PceI | AGGCCT | 1 cut(s) | 1478 |
| PciSI | GCTCTTC | 1 cut(s) | 2979 |
| PctI | GAATGC | 5 cut(s) | 1130, 1132, 1671, 1714, 2322 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1130 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2685 |
| PkrI | GCNGC | 7 cut(s) | 6, 46, 49, 514, 1601, 2564, 3056 |
| PleI | GAGTC | 9 cut(s) | 277, 888, 963, 1582, 2385, 2497, 2731, 2853, 3097 |
| PpsI | GAGTC | 9 cut(s) | 277, 888, 963, 1582, 2385, 2497, 2731, 2853, 3097 |
| PshAI | GACNNNNGTC | 1 cut(s) | 954 |
| PsiI | TTATAA | 1 cut(s) | 905 |
| Psp124BI | GAGCTC | 1 cut(s) | 252 |
| Psp1406I | AACGTT | 2 cut(s) | 1042, 2889 |
| Psp6I | CCWGG | 2 cut(s) | 718, 1194 |
| PspFI | CCCAGC | 1 cut(s) | 2748 |
| PspGI | CCWGG | 2 cut(s) | 718, 1194 |
| PspN4I | GGNNCC | 6 cut(s) | 402, 717, 2064, 3123, 3186, 3235 |
| PspPI | GGNCC | 5 cut(s) | 544, 716, 1198, 2311, 3184 |
| PstI | CTGCAG | 1 cut(s) | 356 |
| PsuI | RGATCY | 3 cut(s) | 1291, 2032, 2927 |
| RsaI | GTAC | 6 cut(s) | 414, 551, 1185, 1978, 2047, 2698 |
| RsaNI | GTAC | 6 cut(s) | 413, 550, 1184, 1977, 2046, 2697 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1921, 2601 |
| SacI | GAGCTC | 1 cut(s) | 252 |
| SapI | GCTCTTC | 1 cut(s) | 2979 |
| SatI | GCNGC | 7 cut(s) | 5, 45, 48, 513, 1600, 2563, 3055 |
| Sau3AI | GATC | 8 cut(s) | 88, 160, 457, 809, 1096, 1291, 2032, 2927 |
| Sau96I | GGNCC | 5 cut(s) | 544, 716, 1198, 2311, 3184 |
| SchI | GAGTC | 9 cut(s) | 278, 888, 964, 1583, 2386, 2498, 2731, 2853, 3098 |
| ScrFI | CCNGG | 2 cut(s) | 720, 1196 |
| SduI | GDGCHC | 2 cut(s) | 252, 879 |
| SfcI | CTRYAG | 2 cut(s) | 352, 2160 |
| SinI | GGWCC | 2 cut(s) | 2311, 3184 |
| SmiI | ATTTAAAT | 1 cut(s) | 1968 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1921, 2601 |
| SmlI | CTYRAG | 4 cut(s) | 313, 503, 2192, 2230 |
| SmoI | CTYRAG | 4 cut(s) | 313, 503, 2192, 2230 |
| SseBI | AGGCCT | 1 cut(s) | 1478 |
| SsiI | CCGC | 1 cut(s) | 3059 |
| SspI | AATATT | 1 cut(s) | 2519 |
| SspMI | CTAG | 5 cut(s) | 963, 1421, 2315, 2372, 2622 |
| SstI | GAGCTC | 1 cut(s) | 252 |
| StuI | AGGCCT | 1 cut(s) | 1478 |
| StyD4I | CCNGG | 2 cut(s) | 718, 1194 |
| StyI | CCWWGG | 2 cut(s) | 687, 2904 |
| SwaI | ATTTAAAT | 1 cut(s) | 1968 |
| TaaI | ACNGT | 5 cut(s) | 881, 1608, 2114, 2701, 2832 |
| TaiI | ACGT | 7 cut(s) | 240, 627, 637, 954, 1045, 1936, 2892 |
| TaqI | TCGA | 7 cut(s) | 130, 537, 1890, 2655, 2933, 2960, 3179 |
| TatI | WGTACW | 1 cut(s) | 1976 |
| TseFI | GTSAC | 3 cut(s) | 437, 1575, 2468 |
| TseI | GCWGC | 7 cut(s) | 4, 44, 47, 512, 1599, 2562, 3054 |
| Tsp45I | GTSAC | 3 cut(s) | 437, 1575, 2468 |
| TspGWI | ACGGA | 5 cut(s) | 1830, 2265, 2964, 2985, 3134 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2685 |
| VneI | GTGCAC | 1 cut(s) | 875 |
| VpaK11BI | GGWCC | 2 cut(s) | 2311, 3184 |
| XceI | RCATGY | 1 cut(s) | 1181 |
| XmiI | GTMKAC | 4 cut(s) | 170, 658, 1074, 1401 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1130 |
| XspI | CTAG | 5 cut(s) | 963, 1421, 2315, 2372, 2622 |
| Zsp2I | ATGCAT | 2 cut(s) | 1132, 1533 |