TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1533 |
| AccB1I | GGYRCC | 2 cut(s) | 273, 369 |
| AccI | GTMKAC | 1 cut(s) | 1086 |
| AciI | CCGC | 2 cut(s) | 271, 1166 |
| AclWI | GGATC | 3 cut(s) | 289, 388, 994 |
| AcoI | YGGCCR | 2 cut(s) | 12, 332 |
| AcsI | RAATTY | 2 cut(s) | 416, 1257 |
| AcvI | CACGTG | 2 cut(s) | 1504, 1547 |
| AdeI | CACNNNGTG | 2 cut(s) | 439, 1306 |
| AfaI | GTAC | 4 cut(s) | 125, 285, 1047, 1299 |
| AfeI | AGCGCT | 1 cut(s) | 396 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 794, 1340 |
| AflIII | ACRYGT | 2 cut(s) | 1544, 1546 |
| AgsI | TTSAA | 7 cut(s) | 218, 268, 421, 729, 853, 1097, 1349 |
| AjiI | CACGTC | 1 cut(s) | 1079 |
| AjnI | CCWGG | 2 cut(s) | 276, 1459 |
| AluBI | AGCT | 7 cut(s) | 172, 458, 683, 716, 960, 965, 1112 |
| AluI | AGCT | 7 cut(s) | 172, 458, 683, 716, 960, 965, 1112 |
| Alw21I | GWGCWC | 1 cut(s) | 444 |
| Alw26I | GTCTC | 1 cut(s) | 809 |
| Alw44I | GTGCAC | 1 cut(s) | 440 |
| AlwI | GGATC | 3 cut(s) | 289, 388, 994 |
| Ama87I | CYCGRG | 1 cut(s) | 966 |
| Aor51HI | AGCGCT | 1 cut(s) | 396 |
| AoxI | GGCC | 4 cut(s) | 12, 332, 796, 1099 |
| ApaLI | GTGCAC | 1 cut(s) | 440 |
| ApeKI | GCWGC | 3 cut(s) | 23, 260, 470 |
| ApoI | RAATTY | 2 cut(s) | 416, 1257 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1434 |
| AspLEI | GCGC | 1 cut(s) | 397 |
| AsuHPI | GGTGA | 4 cut(s) | 101, 401, 515, 868 |
| AvaI | CYCGRG | 1 cut(s) | 966 |
| BaeGI | GKGCMC | 1 cut(s) | 444 |
| BalI | TGGCCA | 1 cut(s) | 14 |
| BanI | GGYRCC | 2 cut(s) | 273, 369 |
| BanII | GRGCYC | 1 cut(s) | 357 |
| BauI | CACGAG | 1 cut(s) | 1487 |
| BbrPI | CACGTG | 2 cut(s) | 1504, 1547 |
| Bbv12I | GWGCWC | 1 cut(s) | 444 |
| BbvI | GCAGC | 3 cut(s) | 35, 272, 482 |
| BccI | CCATC | 4 cut(s) | 441, 494, 740, 1376 |
| BciT130I | CCWGG | 2 cut(s) | 278, 1461 |
| BclI | TGATCA | 1 cut(s) | 1498 |
| BcoDI | GTCTC | 1 cut(s) | 809 |
| BfaI | CTAG | 5 cut(s) | 800, 1074, 1109, 1319, 1412 |
| BfmI | CTRYAG | 1 cut(s) | 1377 |
| BfoI | RGCGCY | 1 cut(s) | 398 |
| BisI | GCNGC | 4 cut(s) | 24, 261, 471, 1167 |
| BlpI | GCTNAGC | 1 cut(s) | 961 |
| BlsI | GCNGC | 4 cut(s) | 25, 262, 472, 1168 |
| Bme1390I | CCNGG | 2 cut(s) | 278, 1461 |
| BmeT110I | CYCGRG | 1 cut(s) | 966 |
| BmgBI | CACGTC | 1 cut(s) | 1079 |
| BmiI | GGNNCC | 2 cut(s) | 275, 371 |
| BmrFI | CCNGG | 2 cut(s) | 278, 1461 |
| BmsI | GCATC | 3 cut(s) | 206, 1222, 1389 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 442, 474 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 961 |
| BpuEI | CTTGAG | 1 cut(s) | 320 |
| BsaAI | YACGTR | 4 cut(s) | 63, 1306, 1504, 1547 |
| BsaBI | GATNNNNATC | 2 cut(s) | 936, 1497 |
| BsaJI | CCNNGG | 1 cut(s) | 357 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 786, 816 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 794, 1340 |
| Bse1I | ACTGG | 1 cut(s) | 596 |
| Bse3DI | GCAATG | 1 cut(s) | 1269 |
| Bse8I | GATNNNNATC | 2 cut(s) | 936, 1497 |
| BseBI | CCWGG | 2 cut(s) | 278, 1461 |
| BseDI | CCNNGG | 1 cut(s) | 357 |
| BseGI | GGATG | 5 cut(s) | 286, 367, 563, 1391, 1498 |
| BseJI | GATNNNNATC | 2 cut(s) | 936, 1497 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 794, 1340 |
| BseMI | GCAATG | 1 cut(s) | 1269 |
| BseMII | CTCAG | 3 cut(s) | 187, 533, 827 |
| BseNI | ACTGG | 1 cut(s) | 596 |
| BseRI | GAGGAG | 2 cut(s) | 195, 198 |
| BseSI | GKGCMC | 1 cut(s) | 444 |
| BseXI | GCAGC | 3 cut(s) | 35, 272, 482 |
| BsgI | GTGCAG | 1 cut(s) | 1101 |
| BshFI | GGCC | 4 cut(s) | 14, 334, 798, 1101 |
| BshNI | GGYRCC | 2 cut(s) | 273, 369 |
| BsiHKAI | GWGCWC | 1 cut(s) | 444 |
| BsiHKCI | CYCGRG | 1 cut(s) | 966 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 794, 1340 |
| BsmAI | GTCTC | 1 cut(s) | 809 |
| BsmI | GAATGC | 2 cut(s) | 416, 1328 |
| BsnI | GGCC | 4 cut(s) | 14, 334, 798, 1101 |
| BsoBI | CYCGRG | 1 cut(s) | 966 |
| Bsp1286I | GDGCHC | 2 cut(s) | 357, 444 |
| Bsp1407I | TGTACA | 2 cut(s) | 123, 1297 |
| Bsp143I | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 961 |
| BspACI | CCGC | 2 cut(s) | 271, 1166 |
| BspANI | GGCC | 4 cut(s) | 14, 334, 798, 1101 |
| BspCNI | CTCAG | 3 cut(s) | 186, 532, 828 |
| BspLI | GGNNCC | 2 cut(s) | 275, 371 |
| BspPI | GGATC | 3 cut(s) | 289, 388, 994 |
| BspT107I | GGYRCC | 2 cut(s) | 273, 369 |
| BsrDI | GCAATG | 1 cut(s) | 1269 |
| BsrGI | TGTACA | 2 cut(s) | 123, 1297 |
| BsrI | ACTGG | 1 cut(s) | 596 |
| BssECI | CCNNGG | 1 cut(s) | 357 |
| BssMI | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| BssNAI | GTATAC | 1 cut(s) | 1087 |
| BssSI | CACGAG | 1 cut(s) | 1487 |
| Bst1107I | GTATAC | 1 cut(s) | 1087 |
| Bst2BI | CACGAG | 1 cut(s) | 1487 |
| Bst2UI | CCWGG | 2 cut(s) | 278, 1461 |
| Bst4CI | ACNGT | 3 cut(s) | 128, 951, 1120 |
| Bst6I | CTCTTC | 5 cut(s) | 43, 172, 213, 825, 887 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1408 |
| BstAUI | TGTACA | 2 cut(s) | 123, 1297 |
| BstBAI | YACGTR | 4 cut(s) | 63, 1306, 1504, 1547 |
| BstC8I | GCNNGC | 3 cut(s) | 399, 1164, 1509 |
| BstDEI | CTNAG | 6 cut(s) | 77, 173, 519, 550, 836, 961 |
| BstF5I | GGATG | 5 cut(s) | 286, 367, 563, 1391, 1498 |
| BstH2I | RGCGCY | 1 cut(s) | 398 |
| BstHHI | GCGC | 1 cut(s) | 397 |
| BstKTI | GATC | 6 cut(s) | 118, 297, 383, 989, 1156, 1501 |
| BstMAI | GTCTC | 1 cut(s) | 809 |
| BstMBI | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 20, 1079, 1408 |
| BstNI | CCWGG | 2 cut(s) | 278, 1461 |
| BstNSI | RCATGY | 1 cut(s) | 1278 |
| BstSCI | CCNGG | 2 cut(s) | 276, 1459 |
| BstSFI | CTRYAG | 1 cut(s) | 1377 |
| BstSLI | GKGCMC | 1 cut(s) | 444 |
| BstV1I | GCAGC | 3 cut(s) | 35, 272, 482 |
| BstX2I | RGATCY | 2 cut(s) | 294, 380 |
| BstYI | RGATCY | 2 cut(s) | 294, 380 |
| BstZ17I | GTATAC | 1 cut(s) | 1087 |
| BsuRI | GGCC | 4 cut(s) | 14, 334, 798, 1101 |
| BtrI | CACGTC | 1 cut(s) | 1079 |
| BtsCI | GGATG | 5 cut(s) | 286, 367, 563, 1391, 1498 |
| BtsIMutI | CAGTG | 1 cut(s) | 133 |
| Cac8I | GCNNGC | 3 cut(s) | 399, 1164, 1509 |
| CfoI | GCGC | 1 cut(s) | 397 |
| Csp6I | GTAC | 4 cut(s) | 124, 284, 1046, 1298 |
| CviAII | CATG | 9 cut(s) | 57, 407, 512, 569, 664, 737, 791, 1275, 1403 |
| CviQI | GTAC | 4 cut(s) | 124, 284, 1046, 1298 |
| DdeI | CTNAG | 6 cut(s) | 77, 173, 519, 550, 836, 961 |
| DpnI | GATC | 6 cut(s) | 117, 296, 382, 988, 1155, 1500 |
| DpnII | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| DraI | TTTAAA | 1 cut(s) | 1285 |
| DraIII | CACNNNGTG | 2 cut(s) | 439, 1306 |
| EaeI | YGGCCR | 2 cut(s) | 12, 332 |
| Eam1104I | CTCTTC | 5 cut(s) | 43, 172, 213, 825, 887 |
| EarI | CTCTTC | 5 cut(s) | 43, 172, 213, 825, 887 |
| Eco147I | AGGCCT | 2 cut(s) | 798, 1101 |
| Eco24I | GRGCYC | 1 cut(s) | 357 |
| Eco47III | AGCGCT | 1 cut(s) | 396 |
| Eco72I | CACGTG | 2 cut(s) | 1504, 1547 |
| Eco88I | CYCGRG | 1 cut(s) | 966 |
| EcoRII | CCWGG | 2 cut(s) | 276, 1459 |
| EcoT22I | ATGCAT | 3 cut(s) | 574, 1237, 1404 |
| EcoT38I | GRGCYC | 1 cut(s) | 357 |
| FaeI | CATG | 9 cut(s) | 60, 410, 515, 572, 667, 740, 794, 1278, 1406 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 367, 399, 804, 836, 902, 934 |
| FatI | CATG | 9 cut(s) | 56, 406, 511, 568, 663, 736, 790, 1274, 1402 |
| FbaI | TGATCA | 1 cut(s) | 1498 |
| FblI | GTMKAC | 1 cut(s) | 1086 |
| Fnu4HI | GCNGC | 4 cut(s) | 24, 261, 471, 1167 |
| FokI | GGATG | 5 cut(s) | 293, 374, 550, 1398, 1505 |
| FriOI | GRGCYC | 1 cut(s) | 357 |
| Fsp4HI | GCNGC | 4 cut(s) | 24, 261, 471, 1167 |
| FspBI | CTAG | 5 cut(s) | 800, 1074, 1109, 1319, 1412 |
| GlaI | GCGC | 1 cut(s) | 396 |
| GluI | GCNGC | 4 cut(s) | 24, 261, 471, 1167 |
| HaeII | RGCGCY | 1 cut(s) | 398 |
| HaeIII | GGCC | 4 cut(s) | 14, 334, 798, 1101 |
| HhaI | GCGC | 1 cut(s) | 397 |
| Hin1II | CATG | 9 cut(s) | 60, 410, 515, 572, 667, 740, 794, 1278, 1406 |
| Hin6I | GCGC | 1 cut(s) | 395 |
| HinP1I | GCGC | 1 cut(s) | 395 |
| HincII | GTYRAC | 1 cut(s) | 541 |
| HindII | GTYRAC | 1 cut(s) | 541 |
| HphI | GGTGA | 4 cut(s) | 101, 401, 515, 868 |
| Hpy166II | GTNNAC | 5 cut(s) | 442, 489, 541, 1087, 1300 |
| Hpy188I | TCNGA | 9 cut(s) | 86, 141, 176, 361, 466, 499, 837, 976, 1053 |
| Hpy188III | TCNNGA | 5 cut(s) | 421, 919, 926, 1442, 1487 |
| Hpy8I | GTNNAC | 5 cut(s) | 442, 489, 541, 1087, 1300 |
| HpyAV | CCTTC | 6 cut(s) | 42, 136, 166, 847, 1112, 1274 |
| HpyCH4III | ACNGT | 3 cut(s) | 128, 951, 1120 |
| HpyCH4IV | ACGT | 5 cut(s) | 62, 1078, 1305, 1503, 1546 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 20, 1079, 1408 |
| HpyF3I | CTNAG | 6 cut(s) | 77, 173, 519, 550, 836, 961 |
| HpySE526I | ACGT | 5 cut(s) | 62, 1078, 1305, 1503, 1546 |
| Hsp92II | CATG | 9 cut(s) | 60, 410, 515, 572, 667, 740, 794, 1278, 1406 |
| HspAI | GCGC | 1 cut(s) | 395 |
| Ksp22I | TGATCA | 1 cut(s) | 1498 |
| Kzo9I | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| LmnI | GCTCC | 1 cut(s) | 680 |
| Lsp1109I | GCAGC | 3 cut(s) | 35, 272, 482 |
| LweI | GCATC | 3 cut(s) | 206, 1222, 1389 |
| MaeI | CTAG | 5 cut(s) | 800, 1074, 1109, 1319, 1412 |
| MaeII | ACGT | 5 cut(s) | 62, 1078, 1305, 1503, 1546 |
| MaeIII | GTNAC | 7 cut(s) | 503, 856, 951, 1178, 1306, 1328, 1549 |
| MalI | GATC | 6 cut(s) | 117, 296, 382, 988, 1155, 1500 |
| MboI | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| MfeI | CAATTG | 5 cut(s) | 213, 705, 729, 806, 941 |
| MflI | RGATCY | 2 cut(s) | 294, 380 |
| MhlI | GDGCHC | 2 cut(s) | 357, 444 |
| MlsI | TGGCCA | 1 cut(s) | 14 |
| MluNI | TGGCCA | 1 cut(s) | 14 |
| MlyI | GAGTC | 4 cut(s) | 230, 617, 811, 885 |
| MmeI | TCCRAC | 1 cut(s) | 580 |
| Mox20I | TGGCCA | 1 cut(s) | 14 |
| Mph1103I | ATGCAT | 3 cut(s) | 574, 1237, 1404 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1434 |
| MscI | TGGCCA | 1 cut(s) | 14 |
| MseI | TTAA | 2 cut(s) | 843, 1284 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1137, 1491 |
| Msp20I | TGGCCA | 1 cut(s) | 14 |
| MspR9I | CCNGG | 2 cut(s) | 278, 1461 |
| MunI | CAATTG | 5 cut(s) | 213, 705, 729, 806, 941 |
| Mva1269I | GAATGC | 2 cut(s) | 416, 1328 |
| MvaI | CCWGG | 2 cut(s) | 278, 1461 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 20, 1079, 1408 |
| NdeII | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| NlaIII | CATG | 9 cut(s) | 60, 410, 515, 572, 667, 740, 794, 1278, 1406 |
| NlaIV | GGNNCC | 2 cut(s) | 275, 371 |
| NmuCI | GTSAC | 4 cut(s) | 503, 856, 1306, 1328 |
| NsiI | ATGCAT | 3 cut(s) | 574, 1237, 1404 |
| NspI | RCATGY | 1 cut(s) | 1278 |
| PaeR7I | CTCGAG | 1 cut(s) | 966 |
| PceI | AGGCCT | 2 cut(s) | 798, 1101 |
| PctI | GAATGC | 2 cut(s) | 416, 1328 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1434 |
| PfeI | GAWTC | 6 cut(s) | 147, 515, 922, 937, 1213, 1445 |
| PflFI | GACNNNGTC | 1 cut(s) | 545 |
| PfoI | TCCNGGA | 1 cut(s) | 1459 |
| PkrI | GCNGC | 4 cut(s) | 25, 262, 472, 1168 |
| PleI | GAGTC | 4 cut(s) | 229, 616, 811, 884 |
| PmaCI | CACGTG | 2 cut(s) | 1504, 1547 |
| PmlI | CACGTG | 2 cut(s) | 1504, 1547 |
| PpsI | GAGTC | 4 cut(s) | 229, 616, 811, 884 |
| Ppu21I | YACGTR | 4 cut(s) | 63, 1306, 1504, 1547 |
| PsiI | TTATAA | 1 cut(s) | 1533 |
| Psp6I | CCWGG | 2 cut(s) | 276, 1459 |
| PspCI | CACGTG | 2 cut(s) | 1504, 1547 |
| PspGI | CCWGG | 2 cut(s) | 276, 1459 |
| PspN4I | GGNNCC | 2 cut(s) | 275, 371 |
| PspXI | VCTCGAGB | 1 cut(s) | 966 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1077, 1109 |
| PsuI | RGATCY | 2 cut(s) | 294, 380 |
| PsyI | GACNNNGTC | 1 cut(s) | 545 |
| RsaI | GTAC | 4 cut(s) | 125, 285, 1047, 1299 |
| RsaNI | GTAC | 4 cut(s) | 124, 284, 1046, 1298 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1137, 1491 |
| SaqAI | TTAA | 2 cut(s) | 843, 1284 |
| SatI | GCNGC | 4 cut(s) | 24, 261, 471, 1167 |
| Sau3AI | GATC | 6 cut(s) | 115, 294, 380, 986, 1153, 1498 |
| SchI | GAGTC | 4 cut(s) | 230, 617, 811, 885 |
| ScrFI | CCNGG | 2 cut(s) | 278, 1461 |
| SduI | GDGCHC | 2 cut(s) | 357, 444 |
| SfaNI | GCATC | 3 cut(s) | 206, 1222, 1389 |
| SfcI | CTRYAG | 1 cut(s) | 1377 |
| Sfr274I | CTCGAG | 1 cut(s) | 966 |
| SlaI | CTCGAG | 1 cut(s) | 966 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1137, 1491 |
| SmlI | CTYRAG | 2 cut(s) | 299, 966 |
| SmoI | CTYRAG | 2 cut(s) | 299, 966 |
| SseBI | AGGCCT | 2 cut(s) | 798, 1101 |
| SsiI | CCGC | 2 cut(s) | 271, 1166 |
| SspI | AATATT | 2 cut(s) | 430, 1528 |
| SspMI | CTAG | 5 cut(s) | 800, 1074, 1109, 1319, 1412 |
| StuI | AGGCCT | 2 cut(s) | 798, 1101 |
| StyD4I | CCNGG | 2 cut(s) | 276, 1459 |
| TaaI | ACNGT | 3 cut(s) | 128, 951, 1120 |
| TaiI | ACGT | 5 cut(s) | 65, 1081, 1308, 1506, 1549 |
| TaqI | TCGA | 4 cut(s) | 288, 351, 967, 1230 |
| TatI | WGTACW | 3 cut(s) | 123, 283, 1297 |
| TauI | GCSGC | 1 cut(s) | 1169 |
| TfiI | GAWTC | 6 cut(s) | 147, 515, 922, 937, 1213, 1445 |
| Tru1I | TTAA | 2 cut(s) | 843, 1284 |
| Tru9I | TTAA | 2 cut(s) | 843, 1284 |
| TscAI | CASTG | 1 cut(s) | 133 |
| TseFI | GTSAC | 4 cut(s) | 503, 856, 1306, 1328 |
| TseI | GCWGC | 3 cut(s) | 23, 260, 470 |
| Tsp45I | GTSAC | 4 cut(s) | 503, 856, 1306, 1328 |
| TspDTI | ATGAA | 4 cut(s) | 45, 148, 423, 528 |
| TspGWI | ACGGA | 1 cut(s) | 518 |
| TspRI | CASTG | 1 cut(s) | 133 |
| Tth111I | GACNNNGTC | 1 cut(s) | 545 |
| VneI | GTGCAC | 1 cut(s) | 440 |
| XapI | RAATTY | 2 cut(s) | 416, 1257 |
| XceI | RCATGY | 1 cut(s) | 1278 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 743 |
| XhoI | CTCGAG | 1 cut(s) | 966 |
| XmiI | GTMKAC | 1 cut(s) | 1086 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1434 |
| XspI | CTAG | 5 cut(s) | 800, 1074, 1109, 1319, 1412 |
| Zsp2I | ATGCAT | 3 cut(s) | 574, 1237, 1404 |