TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 1 - 76 | 5.3e-07 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 146 - 216 | 1.9e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_RPS2 | PF23247 | 314 - 454 | 7.8e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_4 | PF12799 | 380 - 423 | 5.9e-08 | Leucine Rich repeats (2 copies) |
| LRR_4 | PF12799 | 426 - 469 | 2e-06 | Leucine Rich repeats (2 copies) |
| LRR_13 | PF23286 | 611 - 696 | 5.6e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 632 - 708 | 1.4e-07 | Leucine-rich repeat region |
| LRR_Zer-1 | PF25013 | 632 - 757 | 4.2e-06 | Zer-1-like, Leucine-rich repeats |
| LRR_14 | PF23598 | 703 - 766 | 1.8e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 696 |
| AclI | AACGTT | 1 cut(s) | 127 |
| AclWI | GGATC | 2 cut(s) | 1998, 2211 |
| AcoI | YGGCCR | 1 cut(s) | 1789 |
| AfaI | GTAC | 7 cut(s) | 724, 1033, 1171, 1240, 1309, 1378, 1726 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1630, 1965 |
| AflIII | ACRYGT | 2 cut(s) | 262, 1010 |
| AjnI | CCWGG | 2 cut(s) | 658, 2104 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2169, 2201 |
| Alw21I | GWGCWC | 2 cut(s) | 948, 1188 |
| Alw26I | GTCTC | 1 cut(s) | 2119 |
| AlwI | GGATC | 2 cut(s) | 1998, 2211 |
| Ama87I | CYCGRG | 1 cut(s) | 91 |
| AoxI | GGCC | 3 cut(s) | 88, 283, 1789 |
| ApeKI | GCWGC | 5 cut(s) | 482, 669, 960, 2028, 2241 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 444 |
| AspS9I | GGNCC | 4 cut(s) | 89, 374, 748, 830 |
| AsuC2I | CCSGG | 2 cut(s) | 92, 93 |
| AsuHPI | GGTGA | 3 cut(s) | 485, 544, 639 |
| AvaI | CYCGRG | 1 cut(s) | 91 |
| AvaII | GGWCC | 3 cut(s) | 374, 748, 830 |
| AxyI | CCTNAGG | 1 cut(s) | 378 |
| BanII | GRGCYC | 2 cut(s) | 948, 1188 |
| Bbv12I | GWGCWC | 2 cut(s) | 948, 1188 |
| BbvI | GCAGC | 5 cut(s) | 494, 681, 947, 2040, 2253 |
| BccI | CCATC | 4 cut(s) | 79, 841, 922, 1894 |
| BceAI | ACGGC | 1 cut(s) | 1776 |
| BciT130I | CCWGG | 2 cut(s) | 660, 2106 |
| BciVI | GTATCC | 2 cut(s) | 1462, 1669 |
| BclI | TGATCA | 1 cut(s) | 181 |
| BcnI | CCSGG | 2 cut(s) | 92, 93 |
| BcoDI | GTCTC | 1 cut(s) | 2119 |
| BfaI | CTAG | 3 cut(s) | 48, 422, 503 |
| BfmI | CTRYAG | 1 cut(s) | 1839 |
| BfuI | GTATCC | 2 cut(s) | 1462, 1669 |
| BisI | GCNGC | 5 cut(s) | 483, 670, 961, 2029, 2242 |
| BlsI | GCNGC | 5 cut(s) | 484, 671, 962, 2030, 2243 |
| Bme1390I | CCNGG | 4 cut(s) | 92, 93, 660, 2106 |
| Bme18I | GGWCC | 3 cut(s) | 374, 748, 830 |
| BmeT110I | CYCGRG | 1 cut(s) | 91 |
| BmgT120I | GGNCC | 4 cut(s) | 89, 374, 748, 830 |
| BmiI | GGNNCC | 2 cut(s) | 750, 1743 |
| BmrFI | CCNGG | 4 cut(s) | 92, 93, 660, 2106 |
| BmsI | GCATC | 3 cut(s) | 406, 1960, 2063 |
| BpmI | CTGGAG | 2 cut(s) | 215, 864 |
| BpuEI | CTTGAG | 9 cut(s) | 1078, 1147, 1216, 1285, 1354, 1423, 1495, 1564, 2143 |
| BpuMI | CCSGG | 2 cut(s) | 92, 93 |
| BsaAI | YACGTR | 1 cut(s) | 1163 |
| BsaBI | GATNNNNATC | 1 cut(s) | 183 |
| BsaJI | CCNNGG | 5 cut(s) | 91, 280, 659, 752, 822 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1630, 1965 |
| Bse1I | ACTGG | 2 cut(s) | 868, 2088 |
| Bse21I | CCTNAGG | 1 cut(s) | 378 |
| Bse3DI | GCAATG | 1 cut(s) | 911 |
| Bse8I | GATNNNNATC | 1 cut(s) | 183 |
| BseBI | CCWGG | 2 cut(s) | 660, 2106 |
| BseDI | CCNNGG | 5 cut(s) | 91, 280, 659, 752, 822 |
| BseJI | GATNNNNATC | 1 cut(s) | 183 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1630, 1965 |
| BseMI | GCAATG | 1 cut(s) | 911 |
| BseMII | CTCAG | 1 cut(s) | 392 |
| BseNI | ACTGG | 2 cut(s) | 868, 2088 |
| BseRI | GAGGAG | 1 cut(s) | 353 |
| BseXI | GCAGC | 5 cut(s) | 494, 681, 947, 2040, 2253 |
| BseYI | CCCAGC | 1 cut(s) | 1653 |
| BsgI | GTGCAG | 2 cut(s) | 2047, 2260 |
| BshFI | GGCC | 3 cut(s) | 90, 285, 1791 |
| BsiHKAI | GWGCWC | 2 cut(s) | 948, 1188 |
| BsiHKCI | CYCGRG | 1 cut(s) | 91 |
| BsiSI | CCGG | 1 cut(s) | 92 |
| BslFI | GGGAC | 2 cut(s) | 734, 999 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1630, 1965 |
| BsmAI | GTCTC | 1 cut(s) | 2119 |
| BsmBI | CGTCTC | 1 cut(s) | 2119 |
| BsmFI | GGGAC | 2 cut(s) | 734, 999 |
| BsmI | GAATGC | 5 cut(s) | 215, 741, 784, 2219, 2291 |
| BsnI | GGCC | 3 cut(s) | 90, 285, 1791 |
| BsoBI | CYCGRG | 1 cut(s) | 91 |
| Bsp1286I | GDGCHC | 2 cut(s) | 948, 1188 |
| Bsp1407I | TGTACA | 5 cut(s) | 1031, 1169, 1238, 1307, 1376 |
| Bsp143I | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| Bsp19I | CCATGG | 1 cut(s) | 822 |
| BspANI | GGCC | 3 cut(s) | 90, 285, 1791 |
| BspCNI | CTCAG | 1 cut(s) | 391 |
| BspHI | TCATGA | 1 cut(s) | 142 |
| BspLI | GGNNCC | 2 cut(s) | 750, 1743 |
| BspPI | GGATC | 2 cut(s) | 1998, 2211 |
| BsrDI | GCAATG | 1 cut(s) | 911 |
| BsrGI | TGTACA | 5 cut(s) | 1031, 1169, 1238, 1307, 1376 |
| BsrI | ACTGG | 2 cut(s) | 868, 2088 |
| BssECI | CCNNGG | 5 cut(s) | 91, 280, 659, 752, 822 |
| BssMI | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| BssT1I | CCWWGG | 2 cut(s) | 280, 822 |
| Bst2UI | CCWGG | 2 cut(s) | 660, 2106 |
| Bst4CI | ACNGT | 2 cut(s) | 2025, 2238 |
| Bst6I | CTCTTC | 1 cut(s) | 1977 |
| BstAUI | TGTACA | 5 cut(s) | 1031, 1169, 1238, 1307, 1376 |
| BstBAI | YACGTR | 1 cut(s) | 1163 |
| BstC8I | GCNNGC | 5 cut(s) | 209, 213, 460, 511, 1868 |
| BstDEI | CTNAG | 7 cut(s) | 64, 307, 378, 407, 809, 1925, 2279 |
| BstDSI | CCRYGG | 2 cut(s) | 752, 822 |
| BstKTI | GATC | 5 cut(s) | 184, 589, 1993, 2206, 2278 |
| BstMAI | GTCTC | 1 cut(s) | 2119 |
| BstMBI | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 886, 1975 |
| BstNI | CCWGG | 2 cut(s) | 660, 2106 |
| BstNSI | RCATGY | 3 cut(s) | 215, 266, 1014 |
| BstSCI | CCNGG | 4 cut(s) | 90, 91, 658, 2104 |
| BstSFI | CTRYAG | 1 cut(s) | 1839 |
| BstV1I | GCAGC | 5 cut(s) | 494, 681, 947, 2040, 2253 |
| BstX2I | RGATCY | 2 cut(s) | 1990, 2203 |
| BstYI | RGATCY | 2 cut(s) | 1990, 2203 |
| Bsu36I | CCTNAGG | 1 cut(s) | 378 |
| BsuI | GTATCC | 2 cut(s) | 1462, 1669 |
| BsuRI | GGCC | 3 cut(s) | 90, 285, 1791 |
| BtgI | CCRYGG | 2 cut(s) | 752, 822 |
| BtsI | GCAGTG | 1 cut(s) | 2152 |
| BtsIMutI | CAGTG | 1 cut(s) | 2152 |
| Cac8I | GCNNGC | 5 cut(s) | 209, 213, 460, 511, 1868 |
| CciI | TCATGA | 1 cut(s) | 142 |
| Cfr13I | GGNCC | 4 cut(s) | 89, 374, 748, 830 |
| Cfr9I | CCCGGG | 1 cut(s) | 91 |
| Csp6I | GTAC | 7 cut(s) | 723, 1032, 1170, 1239, 1308, 1377, 1725 |
| CviAII | CATG | 8 cut(s) | 143, 188, 212, 263, 602, 701, 823, 1011 |
| CviQI | GTAC | 7 cut(s) | 723, 1032, 1170, 1239, 1308, 1377, 1725 |
| DdeI | CTNAG | 7 cut(s) | 64, 307, 378, 407, 809, 1925, 2279 |
| DpnI | GATC | 5 cut(s) | 183, 588, 1992, 2205, 2277 |
| DpnII | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| DraI | TTTAAA | 3 cut(s) | 435, 469, 2265 |
| EaeI | YGGCCR | 1 cut(s) | 1789 |
| Eam1104I | CTCTTC | 1 cut(s) | 1977 |
| EarI | CTCTTC | 1 cut(s) | 1977 |
| Ecl136II | GAGCTC | 2 cut(s) | 946, 1186 |
| Eco130I | CCWWGG | 2 cut(s) | 280, 822 |
| Eco147I | AGGCCT | 1 cut(s) | 285 |
| Eco24I | GRGCYC | 2 cut(s) | 948, 1188 |
| Eco47I | GGWCC | 3 cut(s) | 374, 748, 830 |
| Eco53kI | GAGCTC | 2 cut(s) | 946, 1186 |
| Eco81I | CCTNAGG | 1 cut(s) | 378 |
| Eco88I | CYCGRG | 1 cut(s) | 91 |
| EcoICRI | GAGCTC | 2 cut(s) | 946, 1186 |
| EcoO109I | RGGNCCY | 2 cut(s) | 374, 748 |
| EcoRI | GAATTC | 3 cut(s) | 102, 1272, 2100 |
| EcoRII | CCWGG | 2 cut(s) | 658, 2104 |
| EcoT14I | CCWWGG | 2 cut(s) | 280, 822 |
| EcoT22I | ATGCAT | 1 cut(s) | 217 |
| EcoT38I | GRGCYC | 2 cut(s) | 948, 1188 |
| ErhI | CCWWGG | 2 cut(s) | 280, 822 |
| Esp3I | CGTCTC | 1 cut(s) | 2119 |
| FaeI | CATG | 8 cut(s) | 146, 191, 215, 266, 605, 704, 826, 1014 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1918, 1950 |
| FaqI | GGGAC | 2 cut(s) | 734, 999 |
| FatI | CATG | 8 cut(s) | 142, 187, 211, 262, 601, 700, 822, 1010 |
| FbaI | TGATCA | 1 cut(s) | 181 |
| FblI | GTMKAC | 1 cut(s) | 696 |
| Fnu4HI | GCNGC | 5 cut(s) | 483, 670, 961, 2029, 2242 |
| FriOI | GRGCYC | 2 cut(s) | 948, 1188 |
| Fsp4HI | GCNGC | 5 cut(s) | 483, 670, 961, 2029, 2242 |
| FspBI | CTAG | 3 cut(s) | 48, 422, 503 |
| GluI | GCNGC | 5 cut(s) | 483, 670, 961, 2029, 2242 |
| GsaI | CCCAGC | 1 cut(s) | 1657 |
| GsuI | CTGGAG | 2 cut(s) | 215, 864 |
| HaeIII | GGCC | 3 cut(s) | 90, 285, 1791 |
| HapII | CCGG | 1 cut(s) | 92 |
| Hin1II | CATG | 8 cut(s) | 146, 191, 215, 266, 605, 704, 826, 1014 |
| HincII | GTYRAC | 1 cut(s) | 697 |
| HindII | GTYRAC | 1 cut(s) | 697 |
| HindIII | AAGCTT | 3 cut(s) | 507, 787, 1868 |
| HpaII | CCGG | 1 cut(s) | 92 |
| HphI | GGTGA | 3 cut(s) | 485, 544, 639 |
| Hpy166II | GTNNAC | 2 cut(s) | 697, 1308 |
| Hpy188I | TCNGA | 6 cut(s) | 591, 796, 919, 971, 1885, 2303 |
| Hpy8I | GTNNAC | 2 cut(s) | 697, 1308 |
| HpyAV | CCTTC | 2 cut(s) | 296, 1772 |
| HpyCH4III | ACNGT | 2 cut(s) | 2025, 2238 |
| HpyCH4IV | ACGT | 4 cut(s) | 36, 127, 988, 1162 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 886, 1975 |
| HpyF3I | CTNAG | 7 cut(s) | 64, 307, 378, 407, 809, 1925, 2279 |
| HpySE526I | ACGT | 4 cut(s) | 36, 127, 988, 1162 |
| Hsp92II | CATG | 8 cut(s) | 146, 191, 215, 266, 605, 704, 826, 1014 |
| Ksp22I | TGATCA | 1 cut(s) | 181 |
| Kzo9I | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| LmnI | GCTCC | 3 cut(s) | 943, 1183, 1191 |
| Lsp1109I | GCAGC | 5 cut(s) | 494, 681, 947, 2040, 2253 |
| LweI | GCATC | 3 cut(s) | 406, 1960, 2063 |
| MaeI | CTAG | 3 cut(s) | 48, 422, 503 |
| MaeII | ACGT | 4 cut(s) | 36, 127, 988, 1162 |
| MaeIII | GTNAC | 3 cut(s) | 645, 1774, 2147 |
| MalI | GATC | 5 cut(s) | 183, 588, 1992, 2205, 2277 |
| MboI | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| MboII | GAAGA | 3 cut(s) | 626, 1886, 1994 |
| MfeI | CAATTG | 1 cut(s) | 892 |
| MflI | RGATCY | 2 cut(s) | 1990, 2203 |
| MhlI | GDGCHC | 2 cut(s) | 948, 1188 |
| MlyI | GAGTC | 4 cut(s) | 49, 653, 2065, 2124 |
| MmeI | TCCRAC | 4 cut(s) | 888, 1134, 1341, 1968 |
| Mph1103I | ATGCAT | 1 cut(s) | 217 |
| MroXI | GAANNNNTTC | 1 cut(s) | 444 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1230 |
| MspI | CCGG | 1 cut(s) | 92 |
| MspR9I | CCNGG | 4 cut(s) | 92, 93, 660, 2106 |
| MunI | CAATTG | 1 cut(s) | 892 |
| Mva1269I | GAATGC | 5 cut(s) | 215, 741, 784, 2219, 2291 |
| MvaI | CCWGG | 2 cut(s) | 660, 2106 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 886, 1975 |
| NciI | CCSGG | 2 cut(s) | 92, 93 |
| NcoI | CCATGG | 1 cut(s) | 822 |
| NdeII | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| NlaIII | CATG | 8 cut(s) | 146, 191, 215, 266, 605, 704, 826, 1014 |
| NlaIV | GGNNCC | 2 cut(s) | 750, 1743 |
| NmuCI | GTSAC | 2 cut(s) | 645, 2147 |
| NsiI | ATGCAT | 1 cut(s) | 217 |
| NspI | RCATGY | 3 cut(s) | 215, 266, 1014 |
| PaeI | GCATGC | 1 cut(s) | 215 |
| PagI | TCATGA | 1 cut(s) | 142 |
| PceI | AGGCCT | 1 cut(s) | 285 |
| PciI | ACATGT | 2 cut(s) | 262, 1010 |
| PctI | GAATGC | 5 cut(s) | 215, 741, 784, 2219, 2291 |
| PdmI | GAANNNNTTC | 1 cut(s) | 444 |
| PfoI | TCCNGGA | 1 cut(s) | 2104 |
| PkrI | GCNGC | 5 cut(s) | 484, 671, 962, 2030, 2243 |
| PleI | GAGTC | 4 cut(s) | 48, 652, 2064, 2124 |
| PpsI | GAGTC | 4 cut(s) | 48, 652, 2064, 2124 |
| Ppu21I | YACGTR | 1 cut(s) | 1163 |
| PpuMI | RGGWCCY | 2 cut(s) | 374, 748 |
| PscI | ACATGT | 2 cut(s) | 262, 1010 |
| Psp124BI | GAGCTC | 2 cut(s) | 948, 1188 |
| Psp1406I | AACGTT | 1 cut(s) | 127 |
| Psp5II | RGGWCCY | 2 cut(s) | 374, 748 |
| Psp6I | CCWGG | 2 cut(s) | 658, 2104 |
| PspFI | CCCAGC | 1 cut(s) | 1653 |
| PspGI | CCWGG | 2 cut(s) | 658, 2104 |
| PspN4I | GGNNCC | 2 cut(s) | 750, 1743 |
| PspPI | GGNCC | 4 cut(s) | 89, 374, 748, 830 |
| PspPPI | RGGWCCY | 2 cut(s) | 374, 748 |
| PsuI | RGATCY | 2 cut(s) | 1990, 2203 |
| RsaI | GTAC | 7 cut(s) | 724, 1033, 1171, 1240, 1309, 1378, 1726 |
| RsaNI | GTAC | 7 cut(s) | 723, 1032, 1170, 1239, 1308, 1377, 1725 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1230 |
| SacI | GAGCTC | 2 cut(s) | 948, 1188 |
| SalI | GTCGAC | 1 cut(s) | 695 |
| SatI | GCNGC | 5 cut(s) | 483, 670, 961, 2029, 2242 |
| Sau3AI | GATC | 5 cut(s) | 181, 586, 1990, 2203, 2275 |
| Sau96I | GGNCC | 4 cut(s) | 89, 374, 748, 830 |
| SchI | GAGTC | 4 cut(s) | 49, 653, 2065, 2124 |
| ScrFI | CCNGG | 4 cut(s) | 92, 93, 660, 2106 |
| SduI | GDGCHC | 2 cut(s) | 948, 1188 |
| SfaNI | GCATC | 3 cut(s) | 406, 1960, 2063 |
| SfcI | CTRYAG | 1 cut(s) | 1839 |
| SinI | GGWCC | 3 cut(s) | 374, 748, 830 |
| SmaI | CCCGGG | 1 cut(s) | 93 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1230 |
| SmlI | CTYRAG | 9 cut(s) | 1057, 1126, 1195, 1264, 1333, 1402, 1474, 1543, 2122 |
| SmoI | CTYRAG | 9 cut(s) | 1057, 1126, 1195, 1264, 1333, 1402, 1474, 1543, 2122 |
| SphI | GCATGC | 1 cut(s) | 215 |
| SrfI | GCCCGGGC | 1 cut(s) | 93 |
| SseBI | AGGCCT | 1 cut(s) | 285 |
| SspMI | CTAG | 3 cut(s) | 48, 422, 503 |
| SstI | GAGCTC | 2 cut(s) | 948, 1188 |
| StuI | AGGCCT | 1 cut(s) | 285 |
| StyD4I | CCNGG | 4 cut(s) | 90, 91, 658, 2104 |
| StyI | CCWWGG | 2 cut(s) | 280, 822 |
| TaaI | ACNGT | 2 cut(s) | 2025, 2238 |
| TaiI | ACGT | 4 cut(s) | 39, 130, 991, 1165 |
| TaqI | TCGA | 4 cut(s) | 696, 882, 1756, 2171 |
| TatI | WGTACW | 5 cut(s) | 1031, 1169, 1238, 1307, 1376 |
| TscAI | CASTG | 1 cut(s) | 2152 |
| TseFI | GTSAC | 2 cut(s) | 645, 2147 |
| TseI | GCWGC | 5 cut(s) | 482, 669, 960, 2028, 2241 |
| Tsp45I | GTSAC | 2 cut(s) | 645, 2147 |
| TspDTI | ATGAA | 7 cut(s) | 159, 168, 243, 669, 791, 1031, 1754 |
| TspGWI | ACGGA | 2 cut(s) | 888, 1944 |
| TspMI | CCCGGG | 1 cut(s) | 91 |
| TspRI | CASTG | 1 cut(s) | 2152 |
| VpaK11BI | GGWCC | 3 cut(s) | 374, 748, 830 |
| XceI | RCATGY | 3 cut(s) | 215, 266, 1014 |
| XmaI | CCCGGG | 1 cut(s) | 91 |
| XmiI | GTMKAC | 1 cut(s) | 696 |
| XmnI | GAANNNNTTC | 1 cut(s) | 444 |
| XspI | CTAG | 3 cut(s) | 48, 422, 503 |
| Zsp2I | ATGCAT | 1 cut(s) | 217 |