TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 2 - 91 | 3.1e-16 | TIR domain |
| NB-ARC | PF00931 | 108 - 276 | 2.8e-18 | NB-ARC domain |
| ATPase_2 | PF01637 | 110 - 222 | 1.8e-06 | ATPase domain predominantly from Archaea |
| NACHT | PF05729 | 126 - 224 | 1.4e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 350 - 418 | 1.1e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_EndoS | PF23952 | 523 - 609 | 4.2e-06 | Endo-beta-N-acetylglucosaminidase EndoS LRR domain |
| LRR_13 | PF23286 | 617 - 847 | 1.9e-15 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 629 - 702 | 1.5e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 432, 596 |
| Acc16I | TGCGCA | 1 cut(s) | 3062 |
| AccII | CGCG | 2 cut(s) | 1668, 3044 |
| AccIII | TCCGGA | 3 cut(s) | 838, 1703, 2350 |
| AciI | CCGC | 3 cut(s) | 1273, 2435, 3044 |
| AclWI | GGATC | 9 cut(s) | 62, 75, 145, 359, 1737, 1848, 2596, 3129, 3142 |
| AcoI | YGGCCR | 2 cut(s) | 47, 294 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AcvI | CACGTG | 1 cut(s) | 500 |
| AdeI | CACNNNGTG | 1 cut(s) | 866 |
| AfaI | GTAC | 6 cut(s) | 81, 270, 1011, 1137, 1304, 2041 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 995, 2107, 3022 |
| AflII | CTTAAG | 2 cut(s) | 1631, 1781 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 203 |
| AjnI | CCWGG | 2 cut(s) | 468, 2626 |
| Alw21I | GWGCWC | 3 cut(s) | 172, 1817, 3051 |
| Alw26I | GTCTC | 2 cut(s) | 2186, 2810 |
| Alw44I | GTGCAC | 1 cut(s) | 3047 |
| AlwI | GGATC | 9 cut(s) | 62, 75, 145, 359, 1737, 1848, 2596, 3129, 3142 |
| Ama87I | CYCGRG | 2 cut(s) | 1892, 2957 |
| Aor13HI | TCCGGA | 3 cut(s) | 838, 1703, 2350 |
| AoxI | GGCC | 6 cut(s) | 47, 294, 793, 886, 2921, 3119 |
| ApaLI | GTGCAC | 1 cut(s) | 3047 |
| ApeKI | GCWGC | 3 cut(s) | 34, 1740, 2942 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 888, 3078 |
| AspLEI | GCGC | 3 cut(s) | 2601, 3044, 3063 |
| AspS9I | GGNCC | 3 cut(s) | 769, 2301, 3095 |
| AsuHPI | GGTGA | 5 cut(s) | 116, 346, 1097, 2122, 2237 |
| AsuII | TTCGAA | 2 cut(s) | 1015, 1124 |
| AvaI | CYCGRG | 2 cut(s) | 1892, 2957 |
| AvaII | GGWCC | 3 cut(s) | 769, 2301, 3095 |
| BaeGI | GKGCMC | 1 cut(s) | 3051 |
| BalI | TGGCCA | 2 cut(s) | 49, 296 |
| BamHI | GGATCC | 2 cut(s) | 67, 3134 |
| BanII | GRGCYC | 1 cut(s) | 2958 |
| BauI | CACGAG | 1 cut(s) | 3152 |
| BbrPI | CACGTG | 1 cut(s) | 500 |
| BbsI | GAAGAC | 3 cut(s) | 1095, 2339, 3075 |
| Bbv12I | GWGCWC | 3 cut(s) | 172, 1817, 3051 |
| BbvI | GCAGC | 3 cut(s) | 46, 1727, 2954 |
| BccI | CCATC | 7 cut(s) | 974, 1147, 1181, 1402, 1915, 2676, 2913 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1816, 1850, 1873, 1907 |
| BciT130I | CCWGG | 2 cut(s) | 470, 2628 |
| BclI | TGATCA | 1 cut(s) | 708 |
| BcoDI | GTCTC | 2 cut(s) | 2186, 2810 |
| BfaI | CTAG | 4 cut(s) | 1061, 1217, 1818, 1995 |
| BfoI | RGCGCY | 1 cut(s) | 2602 |
| BfrI | CTTAAG | 2 cut(s) | 1631, 1781 |
| BglII | AGATCT | 2 cut(s) | 255, 1801 |
| BisI | GCNGC | 3 cut(s) | 35, 1741, 2943 |
| BlsI | GCNGC | 3 cut(s) | 36, 1742, 2944 |
| BmcAI | AGTACT | 2 cut(s) | 270, 1011 |
| Bme1390I | CCNGG | 2 cut(s) | 470, 2628 |
| Bme18I | GGWCC | 3 cut(s) | 769, 2301, 3095 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 203 |
| BmeT110I | CYCGRG | 2 cut(s) | 1892, 2957 |
| BmgT120I | GGNCC | 3 cut(s) | 769, 2301, 3095 |
| BmiI | GGNNCC | 3 cut(s) | 69, 3096, 3136 |
| BmrFI | CCNGG | 2 cut(s) | 470, 2628 |
| BmrI | ACTGGG | 1 cut(s) | 299 |
| BmsI | GCATC | 7 cut(s) | 562, 1194, 1297, 1445, 1588, 2246, 2493 |
| BmuI | ACTGGG | 1 cut(s) | 299 |
| BpiI | GAAGAC | 3 cut(s) | 1095, 2339, 3075 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 154, 186 |
| BpmI | CTGGAG | 2 cut(s) | 674, 2728 |
| Bpu14I | TTCGAA | 2 cut(s) | 1015, 1124 |
| BpuEI | CTTGAG | 2 cut(s) | 818, 2311 |
| Bsa29I | ATCGAT | 1 cut(s) | 237 |
| BsaAI | YACGTR | 2 cut(s) | 500, 3029 |
| BsaBI | GATNNNNATC | 2 cut(s) | 576, 3168 |
| BsaI | GGTCTC | 1 cut(s) | 2186 |
| BsaJI | CCNNGG | 1 cut(s) | 1574 |
| BsaWI | WCCGGW | 3 cut(s) | 838, 1703, 2350 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 995, 2107, 3022 |
| Bse1I | ACTGG | 5 cut(s) | 50, 305, 657, 2112, 2711 |
| Bse3DI | GCAATG | 3 cut(s) | 1065, 1612, 2638 |
| Bse8I | GATNNNNATC | 2 cut(s) | 576, 3168 |
| BseAI | TCCGGA | 3 cut(s) | 838, 1703, 2350 |
| BseBI | CCWGG | 2 cut(s) | 470, 2628 |
| BseCI | ATCGAT | 1 cut(s) | 237 |
| BseDI | CCNNGG | 1 cut(s) | 1574 |
| BseGI | GGATG | 9 cut(s) | 652, 1413, 1460, 1921, 2150, 2261, 2467, 2668, 2924 |
| BseJI | GATNNNNATC | 2 cut(s) | 576, 3168 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 995, 2107, 3022 |
| BseMI | GCAATG | 3 cut(s) | 1065, 1612, 2638 |
| BseMII | CTCAG | 2 cut(s) | 2507, 3153 |
| BseNI | ACTGG | 5 cut(s) | 50, 305, 657, 2112, 2711 |
| BseRI | GAGGAG | 3 cut(s) | 158, 178, 2725 |
| BseSI | GKGCMC | 1 cut(s) | 3051 |
| BseXI | GCAGC | 3 cut(s) | 46, 1727, 2954 |
| BsgI | GTGCAG | 1 cut(s) | 1726 |
| Bsh1236I | CGCG | 2 cut(s) | 1668, 3044 |
| BshFI | GGCC | 6 cut(s) | 49, 296, 795, 888, 2923, 3121 |
| BshVI | ATCGAT | 1 cut(s) | 237 |
| BsiHKAI | GWGCWC | 3 cut(s) | 172, 1817, 3051 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1892, 2957 |
| BsiSI | CCGG | 3 cut(s) | 839, 1704, 2351 |
| BslFI | GGGAC | 4 cut(s) | 58, 403, 1641, 3108 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 995, 2107, 3022 |
| BsmAI | GTCTC | 2 cut(s) | 2186, 2810 |
| BsmBI | CGTCTC | 1 cut(s) | 2810 |
| BsmFI | GGGAC | 4 cut(s) | 58, 403, 1641, 3108 |
| BsmI | GAATGC | 2 cut(s) | 820, 2511 |
| BsnI | GGCC | 6 cut(s) | 49, 296, 795, 888, 2923, 3121 |
| Bso31I | GGTCTC | 1 cut(s) | 2186 |
| BsoBI | CYCGRG | 2 cut(s) | 1892, 2957 |
| Bsp119I | TTCGAA | 2 cut(s) | 1015, 1124 |
| Bsp1286I | GDGCHC | 4 cut(s) | 172, 1817, 2958, 3051 |
| Bsp13I | TCCGGA | 3 cut(s) | 838, 1703, 2350 |
| BspACI | CCGC | 3 cut(s) | 1273, 2435, 3044 |
| BspANI | GGCC | 6 cut(s) | 49, 296, 795, 888, 2923, 3121 |
| BspCNI | CTCAG | 2 cut(s) | 2508, 3152 |
| BspDI | ATCGAT | 1 cut(s) | 237 |
| BspEI | TCCGGA | 3 cut(s) | 838, 1703, 2350 |
| BspFNI | CGCG | 2 cut(s) | 1668, 3044 |
| BspHI | TCATGA | 1 cut(s) | 1291 |
| BspLI | GGNNCC | 3 cut(s) | 69, 3096, 3136 |
| BspPI | GGATC | 9 cut(s) | 62, 75, 145, 359, 1737, 1848, 2596, 3129, 3142 |
| BspQI | GCTCTTC | 1 cut(s) | 2229 |
| BspT104I | TTCGAA | 2 cut(s) | 1015, 1124 |
| BspTI | CTTAAG | 2 cut(s) | 1631, 1781 |
| BspTNI | GGTCTC | 1 cut(s) | 2186 |
| BsrDI | GCAATG | 3 cut(s) | 1065, 1612, 2638 |
| BsrI | ACTGG | 5 cut(s) | 50, 305, 657, 2112, 2711 |
| BssECI | CCNNGG | 1 cut(s) | 1574 |
| BssSI | CACGAG | 1 cut(s) | 3152 |
| BssT1I | CCWWGG | 1 cut(s) | 1574 |
| Bst2BI | CACGAG | 1 cut(s) | 3152 |
| Bst2UI | CCWGG | 2 cut(s) | 470, 2628 |
| Bst4CI | ACNGT | 4 cut(s) | 205, 606, 2210, 3148 |
| Bst6I | CTCTTC | 4 cut(s) | 210, 534, 2229, 3110 |
| BstAFI | CTTAAG | 2 cut(s) | 1631, 1781 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 866 |
| BstBAI | YACGTR | 2 cut(s) | 500, 3029 |
| BstBI | TTCGAA | 2 cut(s) | 1015, 1124 |
| BstC8I | GCNNGC | 3 cut(s) | 951, 1072, 1271 |
| BstDEI | CTNAG | 5 cut(s) | 259, 2188, 2516, 2540, 3139 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 993 |
| BstF5I | GGATG | 9 cut(s) | 652, 1413, 1460, 1921, 2150, 2261, 2467, 2668, 2924 |
| BstFNI | CGCG | 2 cut(s) | 1668, 3044 |
| BstH2I | RGCGCY | 1 cut(s) | 2602 |
| BstHHI | GCGC | 3 cut(s) | 2601, 3044, 3063 |
| BstMAI | GTCTC | 2 cut(s) | 2186, 2810 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 866, 1275, 2517 |
| BstNI | CCWGG | 2 cut(s) | 470, 2628 |
| BstNSI | RCATGY | 2 cut(s) | 1074, 1446 |
| BstSCI | CCNGG | 2 cut(s) | 468, 2626 |
| BstSLI | GKGCMC | 1 cut(s) | 3051 |
| BstUI | CGCG | 2 cut(s) | 1668, 3044 |
| BstV1I | GCAGC | 3 cut(s) | 46, 1727, 2954 |
| BstV2I | GAAGAC | 3 cut(s) | 1095, 2339, 3075 |
| BstX2I | RGATCY | 8 cut(s) | 67, 150, 255, 1729, 1801, 1853, 2588, 3134 |
| BstYI | RGATCY | 8 cut(s) | 67, 150, 255, 1729, 1801, 1853, 2588, 3134 |
| Bsu15I | ATCGAT | 1 cut(s) | 237 |
| BsuRI | GGCC | 6 cut(s) | 49, 296, 795, 888, 2923, 3121 |
| BsuTUI | ATCGAT | 1 cut(s) | 237 |
| BtsCI | GGATG | 9 cut(s) | 652, 1413, 1460, 1921, 2150, 2261, 2467, 2668, 2924 |
| BtsIMutI | CAGTG | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 3 cut(s) | 951, 1072, 1271 |
| CciI | TCATGA | 1 cut(s) | 1291 |
| CfoI | GCGC | 3 cut(s) | 2601, 3044, 3063 |
| Cfr13I | GGNCC | 3 cut(s) | 769, 2301, 3095 |
| ClaI | ATCGAT | 1 cut(s) | 237 |
| CseI | GACGC | 1 cut(s) | 116 |
| Csp6I | GTAC | 6 cut(s) | 80, 269, 1010, 1136, 1303, 2040 |
| CviQI | GTAC | 6 cut(s) | 80, 269, 1010, 1136, 1303, 2040 |
| DdeI | CTNAG | 5 cut(s) | 259, 2188, 2516, 2540, 3139 |
| DraIII | CACNNNGTG | 1 cut(s) | 866 |
| DriI | GACNNNNNGTC | 1 cut(s) | 203 |
| EaeI | YGGCCR | 2 cut(s) | 47, 294 |
| Eam1104I | CTCTTC | 4 cut(s) | 210, 534, 2229, 3110 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 203 |
| EarI | CTCTTC | 4 cut(s) | 210, 534, 2229, 3110 |
| EciI | GGCGGA | 1 cut(s) | 2424 |
| Eco130I | CCWWGG | 1 cut(s) | 1574 |
| Eco147I | AGGCCT | 3 cut(s) | 795, 888, 3121 |
| Eco24I | GRGCYC | 1 cut(s) | 2958 |
| Eco31I | GGTCTC | 1 cut(s) | 2186 |
| Eco47I | GGWCC | 3 cut(s) | 769, 2301, 3095 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| Eco72I | CACGTG | 1 cut(s) | 500 |
| Eco88I | CYCGRG | 2 cut(s) | 1892, 2957 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 993 |
| EcoRI | GAATTC | 1 cut(s) | 1387 |
| EcoRII | CCWGG | 2 cut(s) | 468, 2626 |
| EcoT14I | CCWWGG | 1 cut(s) | 1574 |
| EcoT22I | ATGCAT | 2 cut(s) | 1209, 1444 |
| EcoT38I | GRGCYC | 1 cut(s) | 2958 |
| ErhI | CCWWGG | 1 cut(s) | 1574 |
| Esp3I | CGTCTC | 1 cut(s) | 2810 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 611, 643 |
| FaqI | GGGAC | 4 cut(s) | 58, 403, 1641, 3108 |
| FbaI | TGATCA | 1 cut(s) | 708 |
| Fnu4HI | GCNGC | 3 cut(s) | 35, 1741, 2943 |
| FokI | GGATG | 9 cut(s) | 659, 1420, 1467, 1928, 2137, 2268, 2474, 2655, 2931 |
| FriOI | GRGCYC | 1 cut(s) | 2958 |
| Fsp4HI | GCNGC | 3 cut(s) | 35, 1741, 2943 |
| FspBI | CTAG | 4 cut(s) | 1061, 1217, 1818, 1995 |
| FspI | TGCGCA | 1 cut(s) | 3062 |
| GlaI | GCGC | 3 cut(s) | 2600, 3043, 3062 |
| GluI | GCNGC | 3 cut(s) | 35, 1741, 2943 |
| GsuI | CTGGAG | 2 cut(s) | 674, 2728 |
| HaeII | RGCGCY | 1 cut(s) | 2602 |
| HaeIII | GGCC | 6 cut(s) | 49, 296, 795, 888, 2923, 3121 |
| HapII | CCGG | 3 cut(s) | 839, 1704, 2351 |
| HgaI | GACGC | 1 cut(s) | 116 |
| HhaI | GCGC | 3 cut(s) | 2601, 3044, 3063 |
| Hin6I | GCGC | 3 cut(s) | 2599, 3042, 3061 |
| HinP1I | GCGC | 3 cut(s) | 2599, 3042, 3061 |
| HincII | GTYRAC | 1 cut(s) | 2374 |
| HindII | GTYRAC | 1 cut(s) | 2374 |
| HindIII | AAGCTT | 2 cut(s) | 1127, 1396 |
| HpaII | CCGG | 3 cut(s) | 839, 1704, 2351 |
| HphI | GGTGA | 5 cut(s) | 116, 346, 1097, 2122, 2237 |
| Hpy166II | GTNNAC | 6 cut(s) | 1303, 2304, 2374, 3049, 3128, 3151 |
| Hpy188I | TCNGA | 8 cut(s) | 356, 894, 1144, 1616, 2269, 2517, 2938, 3142 |
| Hpy8I | GTNNAC | 6 cut(s) | 1303, 2304, 2374, 3049, 3128, 3151 |
| HpyCH4III | ACNGT | 4 cut(s) | 205, 606, 2210, 3148 |
| HpyCH4IV | ACGT | 4 cut(s) | 499, 865, 2819, 3028 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 866, 1275, 2517 |
| HpyF3I | CTNAG | 5 cut(s) | 259, 2188, 2516, 2540, 3139 |
| HpySE526I | ACGT | 4 cut(s) | 499, 865, 2819, 3028 |
| HspAI | GCGC | 3 cut(s) | 2599, 3042, 3061 |
| Kpn2I | TCCGGA | 3 cut(s) | 838, 1703, 2350 |
| Ksp22I | TGATCA | 1 cut(s) | 708 |
| LguI | GCTCTTC | 1 cut(s) | 2229 |
| LmnI | GCTCC | 2 cut(s) | 655, 1275 |
| Lsp1109I | GCAGC | 3 cut(s) | 46, 1727, 2954 |
| LweI | GCATC | 7 cut(s) | 562, 1194, 1297, 1445, 1588, 2246, 2493 |
| MaeI | CTAG | 4 cut(s) | 1061, 1217, 1818, 1995 |
| MaeII | ACGT | 4 cut(s) | 499, 865, 2819, 3028 |
| MaeIII | GTNAC | 9 cut(s) | 104, 226, 247, 1104, 1585, 1662, 1792, 2110, 2210 |
| MfeI | CAATTG | 4 cut(s) | 414, 438, 1619, 1980 |
| MflI | RGATCY | 8 cut(s) | 67, 150, 255, 1729, 1801, 1853, 2588, 3134 |
| MhlI | GDGCHC | 4 cut(s) | 172, 1817, 2958, 3051 |
| MlsI | TGGCCA | 2 cut(s) | 49, 296 |
| MluNI | TGGCCA | 2 cut(s) | 49, 296 |
| MlyI | GAGTC | 1 cut(s) | 520 |
| MmeI | TCCRAC | 4 cut(s) | 289, 334, 2544, 2752 |
| Mox20I | TGGCCA | 2 cut(s) | 49, 296 |
| Mph1103I | ATGCAT | 2 cut(s) | 1209, 1444 |
| MroI | TCCGGA | 3 cut(s) | 838, 1703, 2350 |
| MroXI | GAANNNNTTC | 2 cut(s) | 888, 3078 |
| MscI | TGGCCA | 2 cut(s) | 49, 296 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1296, 2058, 2877 |
| Msp20I | TGGCCA | 2 cut(s) | 49, 296 |
| MspA1I | CMGCKG | 1 cut(s) | 2696 |
| MspCI | CTTAAG | 2 cut(s) | 1631, 1781 |
| MspI | CCGG | 3 cut(s) | 839, 1704, 2351 |
| MspR9I | CCNGG | 2 cut(s) | 470, 2628 |
| MunI | CAATTG | 4 cut(s) | 414, 438, 1619, 1980 |
| Mva1269I | GAATGC | 2 cut(s) | 820, 2511 |
| MvaI | CCWGG | 2 cut(s) | 470, 2628 |
| MvnI | CGCG | 2 cut(s) | 1668, 3044 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 866, 1275, 2517 |
| NlaIV | GGNNCC | 3 cut(s) | 69, 3096, 3136 |
| NmuCI | GTSAC | 3 cut(s) | 104, 1585, 2110 |
| NsbI | TGCGCA | 1 cut(s) | 3062 |
| NsiI | ATGCAT | 2 cut(s) | 1209, 1444 |
| NspI | RCATGY | 2 cut(s) | 1074, 1446 |
| NspV | TTCGAA | 2 cut(s) | 1015, 1124 |
| PaeI | GCATGC | 1 cut(s) | 1074 |
| PaeR7I | CTCGAG | 2 cut(s) | 1892, 2957 |
| PagI | TCATGA | 1 cut(s) | 1291 |
| PceI | AGGCCT | 3 cut(s) | 795, 888, 3121 |
| PciSI | GCTCTTC | 1 cut(s) | 2229 |
| PctI | GAATGC | 2 cut(s) | 820, 2511 |
| PdmI | GAANNNNTTC | 2 cut(s) | 888, 3078 |
| PfeI | GAWTC | 9 cut(s) | 585, 622, 740, 971, 1250, 1766, 1776, 1925, 2165 |
| PkrI | GCNGC | 3 cut(s) | 36, 1742, 2944 |
| PleI | GAGTC | 1 cut(s) | 520 |
| PmaCI | CACGTG | 1 cut(s) | 500 |
| PmlI | CACGTG | 1 cut(s) | 500 |
| PpsI | GAGTC | 1 cut(s) | 520 |
| Ppu21I | YACGTR | 2 cut(s) | 500, 3029 |
| PsiI | TTATAA | 2 cut(s) | 432, 596 |
| Psp6I | CCWGG | 2 cut(s) | 468, 2626 |
| PspCI | CACGTG | 1 cut(s) | 500 |
| PspGI | CCWGG | 2 cut(s) | 468, 2626 |
| PspN4I | GGNNCC | 3 cut(s) | 69, 3096, 3136 |
| PspPI | GGNCC | 3 cut(s) | 769, 2301, 3095 |
| PspXI | VCTCGAGB | 1 cut(s) | 2957 |
| PsuI | RGATCY | 8 cut(s) | 67, 150, 255, 1729, 1801, 1853, 2588, 3134 |
| PvuII | CAGCTG | 1 cut(s) | 2696 |
| RsaI | GTAC | 6 cut(s) | 81, 270, 1011, 1137, 1304, 2041 |
| RsaNI | GTAC | 6 cut(s) | 80, 269, 1010, 1136, 1303, 2040 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1296, 2058, 2877 |
| SapI | GCTCTTC | 1 cut(s) | 2229 |
| SatI | GCNGC | 3 cut(s) | 35, 1741, 2943 |
| Sau96I | GGNCC | 3 cut(s) | 769, 2301, 3095 |
| ScaI | AGTACT | 2 cut(s) | 270, 1011 |
| SchI | GAGTC | 1 cut(s) | 520 |
| ScrFI | CCNGG | 2 cut(s) | 470, 2628 |
| SduI | GDGCHC | 4 cut(s) | 172, 1817, 2958, 3051 |
| SfaNI | GCATC | 7 cut(s) | 562, 1194, 1297, 1445, 1588, 2246, 2493 |
| Sfr274I | CTCGAG | 2 cut(s) | 1892, 2957 |
| SfuI | TTCGAA | 2 cut(s) | 1015, 1124 |
| SinI | GGWCC | 3 cut(s) | 769, 2301, 3095 |
| SlaI | CTCGAG | 2 cut(s) | 1892, 2957 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1296, 2058, 2877 |
| SmlI | CTYRAG | 6 cut(s) | 797, 1631, 1781, 1892, 2326, 2957 |
| SmoI | CTYRAG | 6 cut(s) | 797, 1631, 1781, 1892, 2326, 2957 |
| SphI | GCATGC | 1 cut(s) | 1074 |
| SseBI | AGGCCT | 3 cut(s) | 795, 888, 3121 |
| SsiI | CCGC | 3 cut(s) | 1273, 2435, 3044 |
| SspI | AATATT | 1 cut(s) | 1113 |
| SspMI | CTAG | 4 cut(s) | 1061, 1217, 1818, 1995 |
| StuI | AGGCCT | 3 cut(s) | 795, 888, 3121 |
| StyD4I | CCNGG | 2 cut(s) | 468, 2626 |
| StyI | CCWWGG | 1 cut(s) | 1574 |
| TaaI | ACNGT | 4 cut(s) | 205, 606, 2210, 3148 |
| TaiI | ACGT | 4 cut(s) | 502, 868, 2822, 3031 |
| TaqII | GACCGA | 1 cut(s) | 2081 |
| TatI | WGTACW | 2 cut(s) | 268, 1009 |
| TfiI | GAWTC | 9 cut(s) | 585, 622, 740, 971, 1250, 1766, 1776, 1925, 2165 |
| TscAI | CASTG | 1 cut(s) | 131 |
| TseFI | GTSAC | 3 cut(s) | 104, 1585, 2110 |
| TseI | GCWGC | 3 cut(s) | 34, 1740, 2942 |
| Tsp45I | GTSAC | 3 cut(s) | 104, 1585, 2110 |
| TspGWI | ACGGA | 4 cut(s) | 60, 266, 801, 2711 |
| TspRI | CASTG | 1 cut(s) | 131 |
| Vha464I | CTTAAG | 2 cut(s) | 1631, 1781 |
| VneI | GTGCAC | 1 cut(s) | 3047 |
| VpaK11BI | GGWCC | 3 cut(s) | 769, 2301, 3095 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 993 |
| XbaI | TCTAGA | 1 cut(s) | 1060 |
| XceI | RCATGY | 2 cut(s) | 1074, 1446 |
| XhoI | CTCGAG | 2 cut(s) | 1892, 2957 |
| XmnI | GAANNNNTTC | 2 cut(s) | 888, 3078 |
| XspI | CTAG | 4 cut(s) | 1061, 1217, 1818, 1995 |
| ZrmI | AGTACT | 2 cut(s) | 270, 1011 |
| Zsp2I | ATGCAT | 2 cut(s) | 1209, 1444 |