TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 16 - 188 | 9.9e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 256 - 326 | 2e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 484 - 675 | 7.8e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 515 - 600 | 1e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2303 |
| Acc36I | ACCTGC | 1 cut(s) | 2303 |
| AccBSI | CCGCTC | 1 cut(s) | 1891 |
| AccI | GTMKAC | 1 cut(s) | 1003 |
| AciI | CCGC | 7 cut(s) | 126, 1116, 1891, 2276, 2438, 2564, 2643 |
| AclWI | GGATC | 7 cut(s) | 89, 393, 771, 1544, 1572, 1779, 2313 |
| AcoI | YGGCCR | 3 cut(s) | 1468, 2109, 2439 |
| AcuI | CTGAAG | 2 cut(s) | 347, 2262 |
| AfaI | GTAC | 3 cut(s) | 66, 1734, 2272 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 349, 866, 985, 1466 |
| AflII | CTTAAG | 2 cut(s) | 68, 1583 |
| AflIII | ACRYGT | 2 cut(s) | 19, 2609 |
| AgeI | ACCGGT | 1 cut(s) | 1837 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1615, 2048 |
| AjnI | CCWGG | 2 cut(s) | 198, 1074 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 336, 368 |
| Alw26I | GTCTC | 6 cut(s) | 875, 1193, 1478, 1602, 1707, 2035 |
| AlwI | GGATC | 7 cut(s) | 89, 393, 771, 1544, 1572, 1779, 2313 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2308 |
| AoxI | GGCC | 7 cut(s) | 424, 1292, 1468, 1687, 2109, 2439, 2677 |
| ApaI | GGGCCC | 1 cut(s) | 1296 |
| ApeKI | GCWGC | 2 cut(s) | 1788, 2640 |
| AsiGI | ACCGGT | 1 cut(s) | 1837 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 963, 2009 |
| AspLEI | GCGC | 1 cut(s) | 1338 |
| AspS9I | GGNCC | 5 cut(s) | 376, 425, 1207, 1292, 1293 |
| AsuHPI | GGTGA | 3 cut(s) | 1324, 2284, 2642 |
| AsuII | TTCGAA | 1 cut(s) | 2003 |
| AvaII | GGWCC | 2 cut(s) | 376, 1207 |
| AxyI | CCTNAGG | 1 cut(s) | 470 |
| BaeGI | GKGCMC | 1 cut(s) | 1296 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1716, 1749 |
| BalI | TGGCCA | 1 cut(s) | 2111 |
| BanII | GRGCYC | 2 cut(s) | 478, 1296 |
| BauI | CACGAG | 2 cut(s) | 51, 2061 |
| BbsI | GAAGAC | 3 cut(s) | 66, 96, 951 |
| BbvI | GCAGC | 2 cut(s) | 1775, 2627 |
| BccI | CCATC | 6 cut(s) | 1163, 1364, 1658, 1744, 1960, 2112 |
| BceAI | ACGGC | 3 cut(s) | 1129, 1455, 2283 |
| BciT130I | CCWGG | 2 cut(s) | 200, 1076 |
| BciVI | GTATCC | 1 cut(s) | 451 |
| BcoDI | GTCTC | 6 cut(s) | 875, 1193, 1478, 1602, 1707, 2035 |
| BfaI | CTAG | 3 cut(s) | 1631, 1637, 1706 |
| BfmI | CTRYAG | 1 cut(s) | 1781 |
| BfrI | CTTAAG | 2 cut(s) | 68, 1583 |
| BfuAI | ACCTGC | 1 cut(s) | 2303 |
| BfuI | GTATCC | 1 cut(s) | 451 |
| BglII | AGATCT | 1 cut(s) | 652 |
| BisI | GCNGC | 5 cut(s) | 1789, 1892, 2439, 2564, 2641 |
| BlsI | GCNGC | 5 cut(s) | 1790, 1893, 2440, 2565, 2642 |
| BmcAI | AGTACT | 1 cut(s) | 2272 |
| Bme1390I | CCNGG | 2 cut(s) | 200, 1076 |
| Bme18I | GGWCC | 2 cut(s) | 376, 1207 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1615, 2048 |
| BmgT120I | GGNCC | 5 cut(s) | 376, 425, 1207, 1292, 1293 |
| BmiI | GGNNCC | 2 cut(s) | 1208, 1294 |
| BmrFI | CCNGG | 2 cut(s) | 200, 1076 |
| BmsI | GCATC | 5 cut(s) | 676, 918, 1080, 1171, 2550 |
| BpiI | GAAGAC | 3 cut(s) | 66, 96, 951 |
| BpmI | CTGGAG | 3 cut(s) | 426, 1787, 2059 |
| Bpu14I | TTCGAA | 1 cut(s) | 2003 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1776 |
| BsaI | GGTCTC | 1 cut(s) | 875 |
| BsaJI | CCNNGG | 1 cut(s) | 1094 |
| BsaWI | WCCGGW | 1 cut(s) | 1837 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1164, 1194 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 349, 866, 985, 1466 |
| Bse118I | RCCGGY | 2 cut(s) | 1837, 2441 |
| Bse1I | ACTGG | 4 cut(s) | 1220, 1314, 1690, 2291 |
| Bse21I | CCTNAGG | 1 cut(s) | 470 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1776 |
| BseBI | CCWGG | 2 cut(s) | 200, 1076 |
| BseDI | CCNNGG | 1 cut(s) | 1094 |
| BseGI | GGATG | 8 cut(s) | 580, 679, 774, 933, 1071, 1456, 1527, 2565 |
| BseJI | GATNNNNATC | 1 cut(s) | 1776 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 349, 866, 985, 1466 |
| BseMII | CTCAG | 2 cut(s) | 1513, 1683 |
| BseNI | ACTGG | 4 cut(s) | 1220, 1314, 1690, 2291 |
| BseRI | GAGGAG | 1 cut(s) | 1055 |
| BseSI | GKGCMC | 1 cut(s) | 1296 |
| BseX3I | CGGCCG | 1 cut(s) | 2439 |
| BseXI | GCAGC | 2 cut(s) | 1775, 2627 |
| BsgI | GTGCAG | 1 cut(s) | 1282 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1241, 2442 |
| BshFI | GGCC | 7 cut(s) | 426, 1294, 1470, 1689, 2111, 2441, 2679 |
| BshTI | ACCGGT | 1 cut(s) | 1837 |
| BsiEI | CGRYCG | 2 cut(s) | 1241, 2442 |
| BsiSI | CCGG | 2 cut(s) | 1838, 2442 |
| BslFI | GGGAC | 1 cut(s) | 2408 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 349, 866, 985, 1466 |
| BsmAI | GTCTC | 6 cut(s) | 875, 1193, 1478, 1602, 1707, 2035 |
| BsmBI | CGTCTC | 1 cut(s) | 1478 |
| BsmFI | GGGAC | 1 cut(s) | 2408 |
| BsnI | GGCC | 7 cut(s) | 426, 1294, 1470, 1689, 2111, 2441, 2679 |
| Bso31I | GGTCTC | 1 cut(s) | 875 |
| Bsp119I | TTCGAA | 1 cut(s) | 2003 |
| Bsp120I | GGGCCC | 1 cut(s) | 1292 |
| Bsp1286I | GDGCHC | 2 cut(s) | 478, 1296 |
| BspACI | CCGC | 7 cut(s) | 126, 1116, 1891, 2276, 2438, 2564, 2643 |
| BspANI | GGCC | 7 cut(s) | 426, 1294, 1470, 1689, 2111, 2441, 2679 |
| BspCNI | CTCAG | 2 cut(s) | 1512, 1682 |
| BspLI | GGNNCC | 2 cut(s) | 1208, 1294 |
| BspMI | ACCTGC | 1 cut(s) | 2303 |
| BspPI | GGATC | 7 cut(s) | 89, 393, 771, 1544, 1572, 1779, 2313 |
| BspT104I | TTCGAA | 1 cut(s) | 2003 |
| BspTI | CTTAAG | 2 cut(s) | 68, 1583 |
| BspTNI | GGTCTC | 1 cut(s) | 875 |
| BsrBI | CCGCTC | 1 cut(s) | 1891 |
| BsrFI | RCCGGY | 2 cut(s) | 1837, 2441 |
| BsrI | ACTGG | 4 cut(s) | 1220, 1314, 1690, 2291 |
| BssAI | RCCGGY | 2 cut(s) | 1837, 2441 |
| BssECI | CCNNGG | 1 cut(s) | 1094 |
| BssSI | CACGAG | 2 cut(s) | 51, 2061 |
| Bst2BI | CACGAG | 2 cut(s) | 51, 2061 |
| Bst2UI | CCWGG | 2 cut(s) | 200, 1076 |
| Bst4CI | ACNGT | 6 cut(s) | 704, 1008, 1785, 2472, 2533, 2623 |
| Bst6I | CTCTTC | 1 cut(s) | 2111 |
| BstAFI | CTTAAG | 2 cut(s) | 68, 1583 |
| BstBI | TTCGAA | 1 cut(s) | 2003 |
| BstC8I | GCNNGC | 1 cut(s) | 1889 |
| BstDEI | CTNAG | 5 cut(s) | 338, 358, 470, 1499, 1669 |
| BstDSI | CCRYGG | 1 cut(s) | 1094 |
| BstF5I | GGATG | 8 cut(s) | 580, 679, 774, 933, 1071, 1456, 1527, 2565 |
| BstHHI | GCGC | 1 cut(s) | 1338 |
| BstMAI | GTCTC | 6 cut(s) | 875, 1193, 1478, 1602, 1707, 2035 |
| BstMCI | CGRYCG | 2 cut(s) | 1241, 2442 |
| BstNI | CCWGG | 2 cut(s) | 200, 1076 |
| BstNSI | RCATGY | 4 cut(s) | 23, 798, 1410, 2613 |
| BstSCI | CCNGG | 2 cut(s) | 198, 1074 |
| BstSFI | CTRYAG | 1 cut(s) | 1781 |
| BstSLI | GKGCMC | 1 cut(s) | 1296 |
| BstV1I | GCAGC | 2 cut(s) | 1775, 2627 |
| BstV2I | GAAGAC | 3 cut(s) | 66, 96, 951 |
| BstX2I | RGATCY | 4 cut(s) | 652, 1564, 1771, 2305 |
| BstYI | RGATCY | 4 cut(s) | 652, 1564, 1771, 2305 |
| BstZI | CGGCCG | 1 cut(s) | 2439 |
| Bsu36I | CCTNAGG | 1 cut(s) | 470 |
| BsuI | GTATCC | 1 cut(s) | 451 |
| BsuRI | GGCC | 7 cut(s) | 426, 1294, 1470, 1689, 2111, 2441, 2679 |
| BtgI | CCRYGG | 1 cut(s) | 1094 |
| BtsCI | GGATG | 8 cut(s) | 580, 679, 774, 933, 1071, 1456, 1527, 2565 |
| BtsI | GCAGTG | 1 cut(s) | 1644 |
| BtsIMutI | CAGTG | 5 cut(s) | 1307, 1644, 1683, 1790, 2628 |
| BveI | ACCTGC | 1 cut(s) | 2303 |
| Cac8I | GCNNGC | 1 cut(s) | 1889 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2308 |
| CfoI | GCGC | 1 cut(s) | 1338 |
| Cfr10I | RCCGGY | 2 cut(s) | 1837, 2441 |
| Cfr13I | GGNCC | 5 cut(s) | 376, 425, 1207, 1292, 1293 |
| CseI | GACGC | 1 cut(s) | 2038 |
| Csp6I | GTAC | 3 cut(s) | 65, 1733, 2271 |
| CspAI | ACCGGT | 1 cut(s) | 1837 |
| CviAII | CATG | 9 cut(s) | 20, 103, 228, 795, 932, 949, 1407, 1612, 2610 |
| CviQI | GTAC | 3 cut(s) | 65, 1733, 2271 |
| DdeI | CTNAG | 5 cut(s) | 338, 358, 470, 1499, 1669 |
| DraI | TTTAAA | 1 cut(s) | 805 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1615, 2048 |
| EaeI | YGGCCR | 3 cut(s) | 1468, 2109, 2439 |
| EagI | CGGCCG | 1 cut(s) | 2439 |
| Eam1104I | CTCTTC | 1 cut(s) | 2111 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1615, 2048 |
| EarI | CTCTTC | 1 cut(s) | 2111 |
| EciI | GGCGGA | 2 cut(s) | 141, 1131 |
| EclXI | CGGCCG | 1 cut(s) | 2439 |
| Eco24I | GRGCYC | 2 cut(s) | 478, 1296 |
| Eco31I | GGTCTC | 1 cut(s) | 875 |
| Eco47I | GGWCC | 2 cut(s) | 376, 1207 |
| Eco52I | CGGCCG | 1 cut(s) | 2439 |
| Eco57I | CTGAAG | 2 cut(s) | 347, 2262 |
| Eco81I | CCTNAGG | 1 cut(s) | 470 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1207, 1293 |
| EcoRI | GAATTC | 2 cut(s) | 1383, 2246 |
| EcoRII | CCWGG | 2 cut(s) | 198, 1074 |
| EcoT22I | ATGCAT | 2 cut(s) | 691, 933 |
| EcoT38I | GRGCYC | 2 cut(s) | 478, 1296 |
| Esp3I | CGTCTC | 1 cut(s) | 1478 |
| FaeI | CATG | 9 cut(s) | 23, 106, 231, 798, 935, 952, 1410, 1615, 2613 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 51, 83 |
| FaqI | GGGAC | 1 cut(s) | 2408 |
| FatI | CATG | 9 cut(s) | 19, 102, 227, 794, 931, 948, 1406, 1611, 2609 |
| FauNDI | CATATG | 1 cut(s) | 2574 |
| FblI | GTMKAC | 1 cut(s) | 1003 |
| Fnu4HI | GCNGC | 5 cut(s) | 1789, 1892, 2439, 2564, 2641 |
| FokI | GGATG | 8 cut(s) | 587, 686, 781, 940, 1058, 1443, 1534, 2572 |
| FriOI | GRGCYC | 2 cut(s) | 478, 1296 |
| Fsp4HI | GCNGC | 5 cut(s) | 1789, 1892, 2439, 2564, 2641 |
| FspBI | CTAG | 3 cut(s) | 1631, 1637, 1706 |
| GlaI | GCGC | 1 cut(s) | 1337 |
| GluI | GCNGC | 5 cut(s) | 1789, 1892, 2439, 2564, 2641 |
| GsuI | CTGGAG | 3 cut(s) | 426, 1787, 2059 |
| HaeIII | GGCC | 7 cut(s) | 426, 1294, 1470, 1689, 2111, 2441, 2679 |
| HapII | CCGG | 2 cut(s) | 1838, 2442 |
| HgaI | GACGC | 1 cut(s) | 2038 |
| HhaI | GCGC | 1 cut(s) | 1338 |
| Hin1II | CATG | 9 cut(s) | 23, 106, 231, 798, 935, 952, 1410, 1615, 2613 |
| Hin6I | GCGC | 1 cut(s) | 1336 |
| HinP1I | GCGC | 1 cut(s) | 1336 |
| HincII | GTYRAC | 2 cut(s) | 2089, 2214 |
| HindII | GTYRAC | 2 cut(s) | 2089, 2214 |
| HindIII | AAGCTT | 2 cut(s) | 525, 1120 |
| HpaII | CCGG | 2 cut(s) | 1838, 2442 |
| HphI | GGTGA | 3 cut(s) | 1324, 2284, 2642 |
| Hpy188I | TCNGA | 6 cut(s) | 652, 768, 1263, 1909, 2077, 2242 |
| HpyAV | CCTTC | 4 cut(s) | 562, 1470, 2663, 2669 |
| HpyCH4III | ACNGT | 6 cut(s) | 704, 1008, 1785, 2472, 2533, 2623 |
| HpyCH4IV | ACGT | 4 cut(s) | 63, 607, 1284, 1762 |
| HpyF3I | CTNAG | 5 cut(s) | 338, 358, 470, 1499, 1669 |
| HpySE526I | ACGT | 4 cut(s) | 63, 607, 1284, 1762 |
| Hsp92II | CATG | 9 cut(s) | 23, 106, 231, 798, 935, 952, 1410, 1615, 2613 |
| HspAI | GCGC | 1 cut(s) | 1336 |
| LmnI | GCTCC | 1 cut(s) | 1423 |
| Lsp1109I | GCAGC | 2 cut(s) | 1775, 2627 |
| LweI | GCATC | 5 cut(s) | 676, 918, 1080, 1171, 2550 |
| MaeI | CTAG | 3 cut(s) | 1631, 1637, 1706 |
| MaeII | ACGT | 4 cut(s) | 63, 607, 1284, 1762 |
| MaeIII | GTNAC | 8 cut(s) | 295, 316, 746, 809, 848, 1659, 1801, 2527 |
| MbiI | CCGCTC | 1 cut(s) | 1891 |
| MfeI | CAATTG | 3 cut(s) | 1225, 1882, 2389 |
| MflI | RGATCY | 4 cut(s) | 652, 1564, 1771, 2305 |
| MhlI | GDGCHC | 2 cut(s) | 478, 1296 |
| MlsI | TGGCCA | 1 cut(s) | 2111 |
| MluNI | TGGCCA | 1 cut(s) | 2111 |
| MlyI | GAGTC | 5 cut(s) | 324, 1297, 1951, 2037, 2209 |
| MmeI | TCCRAC | 4 cut(s) | 19, 1654, 1835, 2001 |
| Mox20I | TGGCCA | 1 cut(s) | 2111 |
| Mph1103I | ATGCAT | 2 cut(s) | 691, 933 |
| MroXI | GAANNNNTTC | 2 cut(s) | 963, 2009 |
| MscI | TGGCCA | 1 cut(s) | 2111 |
| MslI | CAYNNNNRTG | 2 cut(s) | 226, 1167 |
| Msp20I | TGGCCA | 1 cut(s) | 2111 |
| MspA1I | CMGCKG | 1 cut(s) | 2037 |
| MspCI | CTTAAG | 2 cut(s) | 68, 1583 |
| MspI | CCGG | 2 cut(s) | 1838, 2442 |
| MspR9I | CCNGG | 2 cut(s) | 200, 1076 |
| MunI | CAATTG | 3 cut(s) | 1225, 1882, 2389 |
| MvaI | CCWGG | 2 cut(s) | 200, 1076 |
| NdeI | CATATG | 1 cut(s) | 2574 |
| NlaIII | CATG | 9 cut(s) | 23, 106, 231, 798, 935, 952, 1410, 1615, 2613 |
| NlaIV | GGNNCC | 2 cut(s) | 1208, 1294 |
| NmuCI | GTSAC | 3 cut(s) | 295, 316, 848 |
| NsiI | ATGCAT | 2 cut(s) | 691, 933 |
| NspI | RCATGY | 4 cut(s) | 23, 798, 1410, 2613 |
| NspV | TTCGAA | 1 cut(s) | 2003 |
| PaqCI | CACCTGC | 1 cut(s) | 2303 |
| PciI | ACATGT | 2 cut(s) | 19, 2609 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1482 |
| PdmI | GAANNNNTTC | 2 cut(s) | 963, 2009 |
| PfeI | GAWTC | 8 cut(s) | 47, 218, 283, 622, 974, 1624, 2000, 2323 |
| PinAI | ACCGGT | 1 cut(s) | 1837 |
| PkrI | GCNGC | 5 cut(s) | 1790, 1893, 2440, 2565, 2642 |
| Ple19I | CGATCG | 1 cut(s) | 1241 |
| PleI | GAGTC | 5 cut(s) | 323, 1297, 1950, 2037, 2209 |
| PpsI | GAGTC | 5 cut(s) | 323, 1297, 1950, 2037, 2209 |
| PpuMI | RGGWCCY | 1 cut(s) | 1207 |
| PscI | ACATGT | 2 cut(s) | 19, 2609 |
| Psp5II | RGGWCCY | 1 cut(s) | 1207 |
| Psp6I | CCWGG | 2 cut(s) | 198, 1074 |
| PspGI | CCWGG | 2 cut(s) | 198, 1074 |
| PspN4I | GGNNCC | 2 cut(s) | 1208, 1294 |
| PspOMI | GGGCCC | 1 cut(s) | 1292 |
| PspPI | GGNCC | 5 cut(s) | 376, 425, 1207, 1292, 1293 |
| PspPPI | RGGWCCY | 1 cut(s) | 1207 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2308 |
| PsuI | RGATCY | 4 cut(s) | 652, 1564, 1771, 2305 |
| PvuI | CGATCG | 1 cut(s) | 1241 |
| PvuII | CAGCTG | 1 cut(s) | 2037 |
| RsaI | GTAC | 3 cut(s) | 66, 1734, 2272 |
| RsaNI | GTAC | 3 cut(s) | 65, 1733, 2271 |
| RseI | CAYNNNNRTG | 2 cut(s) | 226, 1167 |
| SatI | GCNGC | 5 cut(s) | 1789, 1892, 2439, 2564, 2641 |
| Sau96I | GGNCC | 5 cut(s) | 376, 425, 1207, 1292, 1293 |
| ScaI | AGTACT | 1 cut(s) | 2272 |
| SchI | GAGTC | 5 cut(s) | 324, 1297, 1951, 2037, 2209 |
| ScrFI | CCNGG | 2 cut(s) | 200, 1076 |
| SduI | GDGCHC | 2 cut(s) | 478, 1296 |
| SfaNI | GCATC | 5 cut(s) | 676, 918, 1080, 1171, 2550 |
| SfcI | CTRYAG | 1 cut(s) | 1781 |
| SfuI | TTCGAA | 1 cut(s) | 2003 |
| SinI | GGWCC | 2 cut(s) | 376, 1207 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 226, 1167 |
| SmlI | CTYRAG | 2 cut(s) | 68, 1583 |
| SmoI | CTYRAG | 2 cut(s) | 68, 1583 |
| SsiI | CCGC | 7 cut(s) | 126, 1116, 1891, 2276, 2438, 2564, 2643 |
| SspI | AATATT | 1 cut(s) | 698 |
| SspMI | CTAG | 3 cut(s) | 1631, 1637, 1706 |
| StyD4I | CCNGG | 2 cut(s) | 198, 1074 |
| TaaI | ACNGT | 6 cut(s) | 704, 1008, 1785, 2472, 2533, 2623 |
| TaiI | ACGT | 4 cut(s) | 66, 610, 1287, 1765 |
| TaqI | TCGA | 8 cut(s) | 1158, 1463, 1476, 1739, 2003, 2581, 2593, 2658 |
| TatI | WGTACW | 1 cut(s) | 2270 |
| TauI | GCSGC | 3 cut(s) | 1894, 2441, 2566 |
| TfiI | GAWTC | 8 cut(s) | 47, 218, 283, 622, 974, 1624, 2000, 2323 |
| TscAI | CASTG | 5 cut(s) | 1314, 1651, 1690, 1790, 2628 |
| TseFI | GTSAC | 3 cut(s) | 295, 316, 848 |
| TseI | GCWGC | 2 cut(s) | 1788, 2640 |
| Tsp45I | GTSAC | 3 cut(s) | 295, 316, 848 |
| TspGWI | ACGGA | 3 cut(s) | 615, 1070, 1111 |
| TspRI | CASTG | 5 cut(s) | 1314, 1651, 1690, 1790, 2628 |
| Vha464I | CTTAAG | 2 cut(s) | 68, 1583 |
| VpaK11BI | GGWCC | 2 cut(s) | 376, 1207 |
| XbaI | TCTAGA | 1 cut(s) | 1636 |
| XceI | RCATGY | 4 cut(s) | 23, 798, 1410, 2613 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2179 |
| XmiI | GTMKAC | 1 cut(s) | 1003 |
| XmnI | GAANNNNTTC | 2 cut(s) | 963, 2009 |
| XspI | CTAG | 3 cut(s) | 1631, 1637, 1706 |
| ZrmI | AGTACT | 1 cut(s) | 2272 |
| Zsp2I | ATGCAT | 2 cut(s) | 691, 933 |