TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 73 - 239 | 6.8e-54 | TIR domain |
| TIR_2 | PF13676 | 75 - 170 | 1.5e-15 | TIR domain |
| NB-ARC | PF00931 | 256 - 423 | 1.6e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 491 - 558 | 3e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 771 - 823 | 6.8e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 814 - 896 | 6.4e-16 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 860 - 917 | 4.1e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 906 - 990 | 1.1e-12 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 943 - 1130 | 1.4e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1154 |
| AatII | GACGTC | 2 cut(s) | 16, 1186 |
| Acc36I | ACCTGC | 1 cut(s) | 1689 |
| Acc65I | GGTACC | 1 cut(s) | 1814 |
| AccB1I | GGYRCC | 3 cut(s) | 1814, 2973, 3896 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1219, 4071 |
| AccBSI | CCGCTC | 1 cut(s) | 3009 |
| AccI | GTMKAC | 1 cut(s) | 1273 |
| AccII | CGCG | 3 cut(s) | 40, 2543, 2545 |
| AciI | CCGC | 4 cut(s) | 623, 2486, 2921, 3009 |
| AcoI | YGGCCR | 1 cut(s) | 735 |
| AcsI | RAATTY | 7 cut(s) | 569, 628, 890, 1216, 1422, 2137, 3609 |
| AcuI | CTGAAG | 5 cut(s) | 1004, 1806, 2627, 2768, 3656 |
| AcyI | GRCGYC | 2 cut(s) | 13, 1183 |
| AfaI | GTAC | 6 cut(s) | 721, 743, 1816, 2402, 3176, 4219 |
| AfeI | AGCGCT | 1 cut(s) | 283 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 423, 1219, 2983, 3108, 3109, 4071 |
| AflII | CTTAAG | 1 cut(s) | 2213 |
| AflIII | ACRYGT | 2 cut(s) | 38, 3824 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3463 |
| AjnI | CCWGG | 8 cut(s) | 54, 1684, 3082, 3394, 3580, 3696, 3933, 4070 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3677, 3709 |
| AleI | CACNNNNGTG | 1 cut(s) | 3572 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 792, 824 |
| Alw21I | GWGCWC | 3 cut(s) | 1578, 2307, 4083 |
| Alw26I | GTCTC | 3 cut(s) | 1174, 2522, 3282 |
| Alw44I | GTGCAC | 2 cut(s) | 2303, 4079 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3146 |
| Ama87I | CYCGRG | 1 cut(s) | 452 |
| Aor51HI | AGCGCT | 1 cut(s) | 283 |
| AoxI | GGCC | 6 cut(s) | 268, 735, 943, 1327, 1587, 1919 |
| ApaLI | GTGCAC | 2 cut(s) | 2303, 4079 |
| ApeKI | GCWGC | 8 cut(s) | 279, 608, 1394, 1416, 1551, 1780, 2941, 4034 |
| ApoI | RAATTY | 7 cut(s) | 569, 628, 890, 1216, 1422, 2137, 3609 |
| AseI | ATTAAT | 1 cut(s) | 1569 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1479, 3036, 4131 |
| Asp718I | GGTACC | 1 cut(s) | 1814 |
| AspA2I | CCTAGG | 1 cut(s) | 1988 |
| AspLEI | GCGC | 2 cut(s) | 284, 2545 |
| AspS9I | GGNCC | 3 cut(s) | 1210, 1588, 3928 |
| AsuC2I | CCSGG | 1 cut(s) | 3524 |
| AvaI | CYCGRG | 1 cut(s) | 452 |
| AvaII | GGWCC | 2 cut(s) | 1210, 3928 |
| AvrII | CCTAGG | 1 cut(s) | 1988 |
| BaeGI | GKGCMC | 3 cut(s) | 2307, 2978, 4083 |
| BalI | TGGCCA | 1 cut(s) | 737 |
| BamHI | GGATCC | 1 cut(s) | 3856 |
| BanI | GGYRCC | 3 cut(s) | 1814, 2973, 3896 |
| BauI | CACGAG | 4 cut(s) | 762, 1017, 3594, 3978 |
| BbsI | GAAGAC | 3 cut(s) | 3212, 3395, 3975 |
| Bbv12I | GWGCWC | 3 cut(s) | 1578, 2307, 4083 |
| BbvCI | CCTCAGC | 1 cut(s) | 70 |
| BbvI | GCAGC | 8 cut(s) | 291, 620, 1381, 1428, 1563, 1767, 2928, 4046 |
| BciT130I | CCWGG | 8 cut(s) | 56, 1686, 3084, 3396, 3582, 3698, 3935, 4072 |
| BciVI | GTATCC | 2 cut(s) | 241, 2012 |
| BclI | TGATCA | 7 cut(s) | 186, 319, 1885, 3802, 3952, 4006, 4087 |
| BcnI | CCSGG | 1 cut(s) | 3524 |
| BcoDI | GTCTC | 3 cut(s) | 1174, 2522, 3282 |
| BfaI | CTAG | 8 cut(s) | 1989, 2123, 2951, 2960, 3759, 3845, 3939, 4228 |
| BfmI | CTRYAG | 2 cut(s) | 2360, 4038 |
| BfoI | RGCGCY | 1 cut(s) | 285 |
| BfrI | CTTAAG | 1 cut(s) | 2213 |
| BfuAI | ACCTGC | 1 cut(s) | 1689 |
| BfuI | GTATCC | 2 cut(s) | 241, 2012 |
| BlnI | CCTAGG | 1 cut(s) | 1988 |
| Bme1390I | CCNGG | 9 cut(s) | 56, 1686, 3084, 3396, 3524, 3582, 3698, 3935, 4072 |
| Bme18I | GGWCC | 2 cut(s) | 1210, 3928 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3463 |
| BmeT110I | CYCGRG | 1 cut(s) | 452 |
| BmgT120I | GGNCC | 3 cut(s) | 1210, 1588, 3928 |
| BmiI | GGNNCC | 6 cut(s) | 1816, 2975, 3858, 3898, 3929, 4128 |
| BmrFI | CCNGG | 9 cut(s) | 56, 1686, 3084, 3396, 3524, 3582, 3698, 3935, 4072 |
| BmrI | ACTGGG | 1 cut(s) | 740 |
| BmuI | ACTGGG | 1 cut(s) | 740 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2544 |
| BpiI | GAAGAC | 3 cut(s) | 3212, 3395, 3975 |
| BpmI | CTGGAG | 2 cut(s) | 121, 3378 |
| Bpu10I | CCTNAGC | 2 cut(s) | 70, 3892 |
| BpuEI | CTTGAG | 4 cut(s) | 118, 1308, 1924, 2267 |
| BpuMI | CCSGG | 1 cut(s) | 3524 |
| Bsa29I | ATCGAT | 2 cut(s) | 2507, 2645 |
| BsaBI | GATNNNNATC | 4 cut(s) | 386, 2638, 3620, 4089 |
| BsaHI | GRCGYC | 2 cut(s) | 13, 1183 |
| BsaJI | CCNNGG | 7 cut(s) | 209, 1684, 1988, 2388, 2526, 2664, 4071 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 933, 963, 2660, 2690 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 423, 1219, 2983, 3108, 3109, 4071 |
| Bse1I | ACTGG | 6 cut(s) | 488, 746, 2988, 3333, 3381, 4128 |
| Bse3DI | GCAATG | 3 cut(s) | 1375, 1488, 2774 |
| Bse8I | GATNNNNATC | 4 cut(s) | 386, 2638, 3620, 4089 |
| BseBI | CCWGG | 8 cut(s) | 56, 1686, 3084, 3396, 3582, 3698, 3935, 4072 |
| BseCI | ATCGAT | 2 cut(s) | 2507, 2645 |
| BseDI | CCNNGG | 7 cut(s) | 209, 1684, 1988, 2388, 2526, 2664, 4071 |
| BseJI | GATNNNNATC | 4 cut(s) | 386, 2638, 3620, 4089 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 423, 1219, 2983, 3108, 3109, 4071 |
| BseMI | GCAATG | 3 cut(s) | 1375, 1488, 2774 |
| BseMII | CTCAG | 7 cut(s) | 84, 221, 663, 1169, 2812, 3633, 4193 |
| BseNI | ACTGG | 6 cut(s) | 488, 746, 2988, 3333, 3381, 4128 |
| BseRI | GAGGAG | 2 cut(s) | 58, 348 |
| BseSI | GKGCMC | 3 cut(s) | 2307, 2978, 4083 |
| BseXI | GCAGC | 8 cut(s) | 291, 620, 1381, 1428, 1563, 1767, 2928, 4046 |
| BseYI | CCCAGC | 2 cut(s) | 896, 3102 |
| BsgI | GTGCAG | 1 cut(s) | 3048 |
| Bsh1236I | CGCG | 3 cut(s) | 40, 2543, 2545 |
| BshFI | GGCC | 6 cut(s) | 270, 737, 945, 1329, 1589, 1921 |
| BshNI | GGYRCC | 3 cut(s) | 1814, 2973, 3896 |
| BshVI | ATCGAT | 2 cut(s) | 2507, 2645 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1578, 2307, 4083 |
| BsiHKCI | CYCGRG | 1 cut(s) | 452 |
| BsiSI | CCGG | 2 cut(s) | 3224, 3524 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 423, 1219, 2983, 3108, 3109, 4071 |
| BsmAI | GTCTC | 3 cut(s) | 1174, 2522, 3282 |
| BsmBI | CGTCTC | 1 cut(s) | 1174 |
| BsmI | GAATGC | 3 cut(s) | 569, 1261, 2824 |
| BsnI | GGCC | 6 cut(s) | 270, 737, 945, 1329, 1589, 1921 |
| BsoBI | CYCGRG | 1 cut(s) | 452 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1578, 2307, 2978, 4083 |
| Bsp1407I | TGTACA | 1 cut(s) | 3174 |
| Bsp19I | CCATGG | 1 cut(s) | 209 |
| BspACI | CCGC | 4 cut(s) | 623, 2486, 2921, 3009 |
| BspANI | GGCC | 6 cut(s) | 270, 737, 945, 1329, 1589, 1921 |
| BspCNI | CTCAG | 7 cut(s) | 83, 222, 662, 1170, 2811, 3634, 4194 |
| BspDI | ATCGAT | 2 cut(s) | 2507, 2645 |
| BspFNI | CGCG | 3 cut(s) | 40, 2543, 2545 |
| BspHI | TCATGA | 7 cut(s) | 559, 1228, 1663, 1711, 3586, 3799, 4093 |
| BspLI | GGNNCC | 6 cut(s) | 1816, 2975, 3858, 3898, 3929, 4128 |
| BspMAI | CTGCAG | 1 cut(s) | 2364 |
| BspMI | ACCTGC | 1 cut(s) | 1689 |
| BspT107I | GGYRCC | 3 cut(s) | 1814, 2973, 3896 |
| BspTI | CTTAAG | 1 cut(s) | 2213 |
| BsrBI | CCGCTC | 1 cut(s) | 3009 |
| BsrDI | GCAATG | 3 cut(s) | 1375, 1488, 2774 |
| BsrGI | TGTACA | 1 cut(s) | 3174 |
| BsrI | ACTGG | 6 cut(s) | 488, 746, 2988, 3333, 3381, 4128 |
| BssECI | CCNNGG | 7 cut(s) | 209, 1684, 1988, 2388, 2526, 2664, 4071 |
| BssNI | GRCGYC | 2 cut(s) | 13, 1183 |
| BssSI | CACGAG | 4 cut(s) | 762, 1017, 3594, 3978 |
| BssT1I | CCWWGG | 5 cut(s) | 209, 1988, 2388, 2526, 2664 |
| Bst2BI | CACGAG | 4 cut(s) | 762, 1017, 3594, 3978 |
| Bst2UI | CCWGG | 8 cut(s) | 56, 1686, 3084, 3396, 3582, 3698, 3935, 4072 |
| Bst4CI | ACNGT | 8 cut(s) | 719, 1348, 1727, 1859, 2005, 2927, 3170, 3724 |
| Bst6I | CTCTTC | 4 cut(s) | 687, 796, 3042, 4137 |
| BstACI | GRCGYC | 2 cut(s) | 13, 1183 |
| BstAFI | CTTAAG | 1 cut(s) | 2213 |
| BstAUI | TGTACA | 1 cut(s) | 3174 |
| BstC8I | GCNNGC | 1 cut(s) | 3229 |
| BstDSI | CCRYGG | 1 cut(s) | 209 |
| BstEII | GGTNACC | 1 cut(s) | 1003 |
| BstFNI | CGCG | 3 cut(s) | 40, 2543, 2545 |
| BstH2I | RGCGCY | 1 cut(s) | 285 |
| BstHHI | GCGC | 2 cut(s) | 284, 2545 |
| BstMAI | GTCTC | 3 cut(s) | 1174, 2522, 3282 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 276, 4022, 4031, 4040 |
| BstNI | CCWGG | 8 cut(s) | 56, 1686, 3084, 3396, 3582, 3698, 3935, 4072 |
| BstNSI | RCATGY | 5 cut(s) | 1497, 1565, 1834, 3231, 3828 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2544 |
| BstPI | GGTNACC | 1 cut(s) | 1003 |
| BstSCI | CCNGG | 9 cut(s) | 54, 1684, 3082, 3394, 3522, 3580, 3696, 3933, 4070 |
| BstSFI | CTRYAG | 2 cut(s) | 2360, 4038 |
| BstSLI | GKGCMC | 3 cut(s) | 2307, 2978, 4083 |
| BstUI | CGCG | 3 cut(s) | 40, 2543, 2545 |
| BstV1I | GCAGC | 8 cut(s) | 291, 620, 1381, 1428, 1563, 1767, 2928, 4046 |
| BstV2I | GAAGAC | 3 cut(s) | 3212, 3395, 3975 |
| BstX2I | RGATCY | 4 cut(s) | 447, 774, 2794, 3856 |
| BstYI | RGATCY | 4 cut(s) | 447, 774, 2794, 3856 |
| Bsu15I | ATCGAT | 2 cut(s) | 2507, 2645 |
| BsuI | GTATCC | 2 cut(s) | 241, 2012 |
| BsuRI | GGCC | 6 cut(s) | 270, 737, 945, 1329, 1589, 1921 |
| BsuTUI | ATCGAT | 2 cut(s) | 2507, 2645 |
| BtgI | CCRYGG | 1 cut(s) | 209 |
| BtsIMutI | CAGTG | 2 cut(s) | 2932, 3500 |
| BveI | ACCTGC | 1 cut(s) | 1689 |
| Cac8I | GCNNGC | 1 cut(s) | 3229 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3146 |
| CciI | TCATGA | 7 cut(s) | 559, 1228, 1663, 1711, 3586, 3799, 4093 |
| CfoI | GCGC | 2 cut(s) | 284, 2545 |
| Cfr13I | GGNCC | 3 cut(s) | 1210, 1588, 3928 |
| ClaI | ATCGAT | 2 cut(s) | 2507, 2645 |
| CseI | GACGC | 5 cut(s) | 278, 2534, 2549, 2811, 4031 |
| Csp6I | GTAC | 6 cut(s) | 720, 742, 1815, 2401, 3175, 4218 |
| CviQI | GTAC | 6 cut(s) | 720, 742, 1815, 2401, 3175, 4218 |
| DraI | TTTAAA | 5 cut(s) | 1264, 1437, 1504, 3124, 4153 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3463 |
| EaeI | YGGCCR | 1 cut(s) | 735 |
| Eam1104I | CTCTTC | 4 cut(s) | 687, 796, 3042, 4137 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3463 |
| EarI | CTCTTC | 4 cut(s) | 687, 796, 3042, 4137 |
| Eco130I | CCWWGG | 5 cut(s) | 209, 1988, 2388, 2526, 2664 |
| Eco147I | AGGCCT | 2 cut(s) | 945, 1329 |
| Eco32I | GATATC | 1 cut(s) | 2864 |
| Eco47I | GGWCC | 2 cut(s) | 1210, 3928 |
| Eco47III | AGCGCT | 1 cut(s) | 283 |
| Eco57I | CTGAAG | 5 cut(s) | 1004, 1806, 2627, 2768, 3656 |
| Eco88I | CYCGRG | 1 cut(s) | 452 |
| Eco91I | GGTNACC | 1 cut(s) | 1003 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1588 |
| EcoO65I | GGTNACC | 1 cut(s) | 1003 |
| EcoRII | CCWGG | 8 cut(s) | 54, 1684, 3082, 3394, 3580, 3696, 3933, 4070 |
| EcoRV | GATATC | 1 cut(s) | 2864 |
| EcoT14I | CCWWGG | 5 cut(s) | 209, 1988, 2388, 2526, 2664 |
| EcoT22I | ATGCAT | 4 cut(s) | 26, 415, 1629, 3233 |
| ErhI | CCWWGG | 5 cut(s) | 209, 1988, 2388, 2526, 2664 |
| Esp3I | CGTCTC | 1 cut(s) | 1174 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 413, 445, 1261, 1293, 1467, 1499 |
| FauNDI | CATATG | 1 cut(s) | 813 |
| FbaI | TGATCA | 7 cut(s) | 186, 319, 1885, 3802, 3952, 4006, 4087 |
| FblI | GTMKAC | 1 cut(s) | 1273 |
| FspBI | CTAG | 8 cut(s) | 1989, 2123, 2951, 2960, 3759, 3845, 3939, 4228 |
| GlaI | GCGC | 2 cut(s) | 283, 2544 |
| GsaI | CCCAGC | 2 cut(s) | 900, 3106 |
| GsuI | CTGGAG | 2 cut(s) | 121, 3378 |
| HaeII | RGCGCY | 1 cut(s) | 285 |
| HaeIII | GGCC | 6 cut(s) | 270, 737, 945, 1329, 1589, 1921 |
| HapII | CCGG | 2 cut(s) | 3224, 3524 |
| HgaI | GACGC | 5 cut(s) | 278, 2534, 2549, 2811, 4031 |
| HhaI | GCGC | 2 cut(s) | 284, 2545 |
| Hin1I | GRCGYC | 2 cut(s) | 13, 1183 |
| Hin6I | GCGC | 2 cut(s) | 282, 2543 |
| HinP1I | GCGC | 2 cut(s) | 282, 2543 |
| HincII | GTYRAC | 2 cut(s) | 580, 1274 |
| HindII | GTYRAC | 2 cut(s) | 580, 1274 |
| HindIII | AAGCTT | 4 cut(s) | 1476, 1542, 2255, 2609 |
| HpaI | GTTAAC | 1 cut(s) | 580 |
| HpaII | CCGG | 2 cut(s) | 3224, 3524 |
| HpyCH4III | ACNGT | 8 cut(s) | 719, 1348, 1727, 1859, 2005, 2927, 3170, 3724 |
| HpyCH4IV | ACGT | 4 cut(s) | 13, 582, 1183, 1867 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 276, 4022, 4031, 4040 |
| HpySE526I | ACGT | 4 cut(s) | 13, 582, 1183, 1867 |
| Hsp92I | GRCGYC | 2 cut(s) | 13, 1183 |
| HspAI | GCGC | 2 cut(s) | 282, 2543 |
| KpnI | GGTACC | 1 cut(s) | 1818 |
| Ksp22I | TGATCA | 7 cut(s) | 186, 319, 1885, 3802, 3952, 4006, 4087 |
| KspAI | GTTAAC | 1 cut(s) | 580 |
| LmnI | GCTCC | 3 cut(s) | 1777, 3841, 3915 |
| Lsp1109I | GCAGC | 8 cut(s) | 291, 620, 1381, 1428, 1563, 1767, 2928, 4046 |
| MaeI | CTAG | 8 cut(s) | 1989, 2123, 2951, 2960, 3759, 3845, 3939, 4228 |
| MaeII | ACGT | 4 cut(s) | 13, 582, 1183, 1867 |
| MaeIII | GTNAC | 4 cut(s) | 1003, 1671, 2986, 3718 |
| MbiI | CCGCTC | 1 cut(s) | 3009 |
| MfeI | CAATTG | 8 cut(s) | 855, 879, 1172, 2439, 2577, 2718, 2787, 2856 |
| MflI | RGATCY | 4 cut(s) | 447, 774, 2794, 3856 |
| MhlI | GDGCHC | 4 cut(s) | 1578, 2307, 2978, 4083 |
| MlsI | TGGCCA | 1 cut(s) | 737 |
| MluI | ACGCGT | 1 cut(s) | 38 |
| MluNI | TGGCCA | 1 cut(s) | 737 |
| MlyI | GAGTC | 8 cut(s) | 383, 637, 2002, 2200, 2324, 2326, 3797, 4151 |
| MmeI | TCCRAC | 5 cut(s) | 1851, 2143, 2219, 2658, 4163 |
| Mox20I | TGGCCA | 1 cut(s) | 737 |
| Mph1103I | ATGCAT | 4 cut(s) | 26, 415, 1629, 3233 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1479, 3036, 4131 |
| MscI | TGGCCA | 1 cut(s) | 737 |
| Msp20I | TGGCCA | 1 cut(s) | 737 |
| MspA1I | CMGCKG | 1 cut(s) | 4037 |
| MspCI | CTTAAG | 1 cut(s) | 2213 |
| MspI | CCGG | 2 cut(s) | 3224, 3524 |
| MspR9I | CCNGG | 9 cut(s) | 56, 1686, 3084, 3396, 3524, 3582, 3698, 3935, 4072 |
| MunI | CAATTG | 8 cut(s) | 855, 879, 1172, 2439, 2577, 2718, 2787, 2856 |
| Mva1269I | GAATGC | 3 cut(s) | 569, 1261, 2824 |
| MvaI | CCWGG | 8 cut(s) | 56, 1686, 3084, 3396, 3582, 3698, 3935, 4072 |
| MvnI | CGCG | 3 cut(s) | 40, 2543, 2545 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 276, 4022, 4031, 4040 |
| NciI | CCSGG | 1 cut(s) | 3524 |
| NcoI | CCATGG | 1 cut(s) | 209 |
| NdeI | CATATG | 1 cut(s) | 813 |
| NlaIV | GGNNCC | 6 cut(s) | 1816, 2975, 3858, 3898, 3929, 4128 |
| NmeAIII | GCCGAG | 1 cut(s) | 4139 |
| NmuCI | GTSAC | 4 cut(s) | 1003, 1671, 2986, 3718 |
| NsiI | ATGCAT | 4 cut(s) | 26, 415, 1629, 3233 |
| NspI | RCATGY | 5 cut(s) | 1497, 1565, 1834, 3231, 3828 |
| OliI | CACNNNNGTG | 1 cut(s) | 3572 |
| PaeI | GCATGC | 1 cut(s) | 3231 |
| PaeR7I | CTCGAG | 1 cut(s) | 452 |
| PagI | TCATGA | 7 cut(s) | 559, 1228, 1663, 1711, 3586, 3799, 4093 |
| PceI | AGGCCT | 2 cut(s) | 945, 1329 |
| PciI | ACATGT | 1 cut(s) | 3824 |
| PctI | GAATGC | 3 cut(s) | 569, 1261, 2824 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1479, 3036, 4131 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1219, 4071 |
| PfoI | TCCNGGA | 3 cut(s) | 3394, 3522, 3696 |
| PleI | GAGTC | 8 cut(s) | 382, 637, 2001, 2199, 2323, 2326, 3796, 4151 |
| PpsI | GAGTC | 8 cut(s) | 382, 637, 2001, 2199, 2323, 2326, 3796, 4151 |
| PscI | ACATGT | 1 cut(s) | 3824 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2544 |
| PshBI | ATTAAT | 1 cut(s) | 1569 |
| PsiI | TTATAA | 1 cut(s) | 1154 |
| Psp6I | CCWGG | 8 cut(s) | 54, 1684, 3082, 3394, 3580, 3696, 3933, 4070 |
| PspEI | GGTNACC | 1 cut(s) | 1003 |
| PspFI | CCCAGC | 2 cut(s) | 896, 3102 |
| PspGI | CCWGG | 8 cut(s) | 54, 1684, 3082, 3394, 3580, 3696, 3933, 4070 |
| PspN4I | GGNNCC | 6 cut(s) | 1816, 2975, 3858, 3898, 3929, 4128 |
| PspPI | GGNCC | 3 cut(s) | 1210, 1588, 3928 |
| PspXI | VCTCGAGB | 1 cut(s) | 452 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1296, 1328 |
| PstI | CTGCAG | 1 cut(s) | 2364 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3146 |
| PsuI | RGATCY | 4 cut(s) | 447, 774, 2794, 3856 |
| PvuII | CAGCTG | 1 cut(s) | 4037 |
| RsaI | GTAC | 6 cut(s) | 721, 743, 1816, 2402, 3176, 4219 |
| RsaNI | GTAC | 6 cut(s) | 720, 742, 1815, 2401, 3175, 4218 |
| SalI | GTCGAC | 1 cut(s) | 1272 |
| Sau96I | GGNCC | 3 cut(s) | 1210, 1588, 3928 |
| SchI | GAGTC | 8 cut(s) | 383, 637, 2002, 2200, 2324, 2326, 3797, 4151 |
| ScrFI | CCNGG | 9 cut(s) | 56, 1686, 3084, 3396, 3524, 3582, 3698, 3935, 4072 |
| SduI | GDGCHC | 4 cut(s) | 1578, 2307, 2978, 4083 |
| SfcI | CTRYAG | 2 cut(s) | 2360, 4038 |
| Sfr274I | CTCGAG | 1 cut(s) | 452 |
| SinI | GGWCC | 2 cut(s) | 1210, 3928 |
| SlaI | CTCGAG | 1 cut(s) | 452 |
| SmlI | CTYRAG | 6 cut(s) | 97, 452, 1323, 1903, 2213, 2282 |
| SmoI | CTYRAG | 6 cut(s) | 97, 452, 1323, 1903, 2213, 2282 |
| SphI | GCATGC | 1 cut(s) | 3231 |
| SseBI | AGGCCT | 2 cut(s) | 945, 1329 |
| SsiI | CCGC | 4 cut(s) | 623, 2486, 2921, 3009 |
| SspI | AATATT | 3 cut(s) | 1536, 1744, 2882 |
| SspMI | CTAG | 8 cut(s) | 1989, 2123, 2951, 2960, 3759, 3845, 3939, 4228 |
| StuI | AGGCCT | 2 cut(s) | 945, 1329 |
| StyD4I | CCNGG | 9 cut(s) | 54, 1684, 3082, 3394, 3522, 3580, 3696, 3933, 4070 |
| StyI | CCWWGG | 5 cut(s) | 209, 1988, 2388, 2526, 2664 |
| TaaI | ACNGT | 8 cut(s) | 719, 1348, 1727, 1859, 2005, 2927, 3170, 3724 |
| TaiI | ACGT | 4 cut(s) | 16, 585, 1186, 1870 |
| TatI | WGTACW | 3 cut(s) | 719, 2400, 3174 |
| TauI | GCSGC | 2 cut(s) | 626, 2923 |
| TscAI | CASTG | 2 cut(s) | 2932, 3500 |
| TseFI | GTSAC | 4 cut(s) | 1003, 1671, 2986, 3718 |
| TseI | GCWGC | 8 cut(s) | 279, 608, 1394, 1416, 1551, 1780, 2941, 4034 |
| Tsp45I | GTSAC | 4 cut(s) | 1003, 1671, 2986, 3718 |
| TspGWI | ACGGA | 3 cut(s) | 1052, 2243, 2949 |
| TspRI | CASTG | 2 cut(s) | 2932, 3500 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1219, 4071 |
| Vha464I | CTTAAG | 1 cut(s) | 2213 |
| VneI | GTGCAC | 2 cut(s) | 2303, 4079 |
| VpaK11BI | GGWCC | 2 cut(s) | 1210, 3928 |
| VspI | ATTAAT | 1 cut(s) | 1569 |
| XapI | RAATTY | 7 cut(s) | 569, 628, 890, 1216, 1422, 2137, 3609 |
| XbaI | TCTAGA | 1 cut(s) | 2122 |
| XceI | RCATGY | 5 cut(s) | 1497, 1565, 1834, 3231, 3828 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 427, 3495 |
| XhoI | CTCGAG | 1 cut(s) | 452 |
| XmaJI | CCTAGG | 1 cut(s) | 1988 |
| XmiI | GTMKAC | 1 cut(s) | 1273 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1479, 3036, 4131 |
| XspI | CTAG | 8 cut(s) | 1989, 2123, 2951, 2960, 3759, 3845, 3939, 4228 |
| ZraI | GACGTC | 2 cut(s) | 14, 1184 |
| Zsp2I | ATGCAT | 4 cut(s) | 26, 415, 1629, 3233 |