TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 105 - 173 | 9.1e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 379 - 483 | 1.1e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 451 - 501 | 3e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 505 - 575 | 8e-13 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 565 - 620 | 1.5e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 620 - 692 | 5.8e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 409 |
| Acc65I | GGTACC | 1 cut(s) | 659 |
| AccB1I | GGYRCC | 2 cut(s) | 659, 2076 |
| AccI | GTMKAC | 1 cut(s) | 3216 |
| AccII | CGCG | 2 cut(s) | 1727, 2316 |
| AciI | CCGC | 3 cut(s) | 394, 2024, 2820 |
| AclWI | GGATC | 9 cut(s) | 1038, 1173, 1251, 1569, 1845, 2177, 2975, 2988, 3252 |
| AcsI | RAATTY | 9 cut(s) | 77, 103, 318, 1048, 1198, 1924, 2309, 2432, 2733 |
| AcuI | CTGAAG | 2 cut(s) | 651, 2780 |
| AcvI | CACGTG | 1 cut(s) | 641 |
| AdeI | CACNNNGTG | 1 cut(s) | 2032 |
| AfaI | GTAC | 5 cut(s) | 661, 1341, 2005, 2036, 2934 |
| AfeI | AGCGCT | 1 cut(s) | 2113 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 117, 1814, 2086, 3207 |
| AflII | CTTAAG | 1 cut(s) | 1369 |
| AflIII | ACRYGT | 5 cut(s) | 640, 1452, 1725, 2935, 2948 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2554 |
| AhlI | ACTAGT | 1 cut(s) | 20 |
| AjiI | CACGTC | 2 cut(s) | 1845, 2949 |
| AjnI | CCWGG | 4 cut(s) | 358, 2185, 2397, 2704 |
| AleI | CACNNNNGTG | 1 cut(s) | 2696 |
| Alw21I | GWGCWC | 2 cut(s) | 426, 1218 |
| Alw26I | GTCTC | 4 cut(s) | 997, 2084, 2451, 3279 |
| Alw44I | GTGCAC | 1 cut(s) | 1214 |
| AlwI | GGATC | 9 cut(s) | 1038, 1173, 1251, 1569, 1845, 2177, 2975, 2988, 3252 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2249 |
| Aor51HI | AGCGCT | 1 cut(s) | 2113 |
| AoxI | GGCC | 3 cut(s) | 361, 435, 764 |
| ApaLI | GTGCAC | 1 cut(s) | 1214 |
| ApeKI | GCWGC | 5 cut(s) | 934, 2044, 3170, 3173, 3176 |
| ApoI | RAATTY | 9 cut(s) | 77, 103, 318, 1048, 1198, 1924, 2309, 2432, 2733 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 321, 1131, 2139 |
| Asp718I | GGTACC | 1 cut(s) | 659 |
| AspA2I | CCTAGG | 1 cut(s) | 833 |
| AspLEI | GCGC | 1 cut(s) | 2114 |
| AspS9I | GGNCC | 2 cut(s) | 436, 3052 |
| AsuC2I | CCSGG | 3 cut(s) | 2466, 2648, 3208 |
| AsuHPI | GGTGA | 6 cut(s) | 362, 383, 510, 2119, 2693, 3110 |
| AsuNHI | GCTAGC | 1 cut(s) | 3137 |
| AvaII | GGWCC | 1 cut(s) | 3052 |
| AvrII | CCTAGG | 1 cut(s) | 833 |
| BaeGI | GKGCMC | 2 cut(s) | 1218, 2081 |
| BamHI | GGATCC | 1 cut(s) | 2980 |
| BanI | GGYRCC | 2 cut(s) | 659, 2076 |
| BauI | CACGAG | 1 cut(s) | 3111 |
| BbrPI | CACGTG | 1 cut(s) | 641 |
| BbsI | GAAGAC | 4 cut(s) | 164, 1677, 2768, 3201 |
| Bbv12I | GWGCWC | 2 cut(s) | 426, 1218 |
| BbvI | GCAGC | 5 cut(s) | 946, 2031, 3160, 3182, 3188 |
| BciT130I | CCWGG | 4 cut(s) | 360, 2187, 2399, 2706 |
| BciVI | GTATCC | 1 cut(s) | 857 |
| BclI | TGATCA | 3 cut(s) | 2926, 3085, 3223 |
| BcnI | CCSGG | 3 cut(s) | 2466, 2648, 3208 |
| BcoDI | GTCTC | 4 cut(s) | 997, 2084, 2451, 3279 |
| BcuI | ACTAGT | 1 cut(s) | 20 |
| BfmI | CTRYAG | 4 cut(s) | 48, 1271, 2210, 3174 |
| BfoI | RGCGCY | 1 cut(s) | 2115 |
| BfrI | CTTAAG | 1 cut(s) | 1369 |
| BfuAI | ACCTGC | 1 cut(s) | 409 |
| BfuI | GTATCC | 1 cut(s) | 857 |
| BisI | GCNGC | 6 cut(s) | 935, 2024, 2045, 3171, 3174, 3177 |
| BlnI | CCTAGG | 1 cut(s) | 833 |
| BlsI | GCNGC | 6 cut(s) | 936, 2025, 2046, 3172, 3175, 3178 |
| Bme1390I | CCNGG | 7 cut(s) | 360, 2187, 2399, 2466, 2648, 2706, 3208 |
| Bme18I | GGWCC | 1 cut(s) | 3052 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2554 |
| BmgBI | CACGTC | 2 cut(s) | 1845, 2949 |
| BmgT120I | GGNCC | 2 cut(s) | 436, 3052 |
| BmiI | GGNNCC | 5 cut(s) | 661, 2078, 2982, 3053, 3258 |
| BmrFI | CCNGG | 7 cut(s) | 360, 2187, 2399, 2466, 2648, 2706, 3208 |
| BmtI | GCTAGC | 1 cut(s) | 3141 |
| BpiI | GAAGAC | 4 cut(s) | 164, 1677, 2768, 3201 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 261, 293, 2446, 2478 |
| BpmI | CTGGAG | 2 cut(s) | 741, 2108 |
| BpuEI | CTTGAG | 3 cut(s) | 769, 1214, 1492 |
| BpuMI | CCSGG | 3 cut(s) | 2466, 2648, 3208 |
| Bsa29I | ATCGAT | 1 cut(s) | 2856 |
| BsaAI | YACGTR | 1 cut(s) | 641 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1248, 1546, 3084, 3225 |
| BsaJI | CCNNGG | 9 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750, 3207 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 117, 1814, 2086, 3207 |
| Bse118I | RCCGGY | 2 cut(s) | 2293, 2597 |
| Bse1I | ACTGG | 2 cut(s) | 2091, 3035 |
| Bse3DI | GCAATG | 3 cut(s) | 217, 330, 3324 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1248, 1546, 3084, 3225 |
| BseBI | CCWGG | 4 cut(s) | 360, 2187, 2399, 2706 |
| BseCI | ATCGAT | 1 cut(s) | 2856 |
| BseDI | CCNNGG | 9 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750, 3207 |
| BseJI | GATNNNNATC | 4 cut(s) | 1248, 1546, 3084, 3225 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 117, 1814, 2086, 3207 |
| BseMI | GCAATG | 3 cut(s) | 217, 330, 3324 |
| BseMII | CTCAG | 4 cut(s) | 1008, 2757, 3050, 3323 |
| BseNI | ACTGG | 2 cut(s) | 2091, 3035 |
| BseSI | GKGCMC | 2 cut(s) | 1218, 2081 |
| BseXI | GCAGC | 5 cut(s) | 946, 2031, 3160, 3182, 3188 |
| BseYI | CCCAGC | 1 cut(s) | 2205 |
| BsgI | GTGCAG | 2 cut(s) | 641, 2151 |
| Bsh1236I | CGCG | 2 cut(s) | 1727, 2316 |
| BshFI | GGCC | 3 cut(s) | 363, 437, 766 |
| BshNI | GGYRCC | 2 cut(s) | 659, 2076 |
| BshVI | ATCGAT | 1 cut(s) | 2856 |
| BsiHKAI | GWGCWC | 2 cut(s) | 426, 1218 |
| BsiSI | CCGG | 5 cut(s) | 2294, 2465, 2598, 2648, 3207 |
| BslFI | GGGAC | 3 cut(s) | 31, 2481, 2732 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 117, 1814, 2086, 3207 |
| BsmAI | GTCTC | 4 cut(s) | 997, 2084, 2451, 3279 |
| BsmFI | GGGAC | 3 cut(s) | 31, 2481, 2732 |
| BsnI | GGCC | 3 cut(s) | 363, 437, 766 |
| Bsp1286I | GDGCHC | 3 cut(s) | 426, 1218, 2081 |
| Bsp1407I | TGTACA | 2 cut(s) | 2003, 2932 |
| Bsp19I | CCATGG | 1 cut(s) | 453 |
| Bsp68I | TCGCGA | 1 cut(s) | 2316 |
| BspACI | CCGC | 3 cut(s) | 394, 2024, 2820 |
| BspANI | GGCC | 3 cut(s) | 363, 437, 766 |
| BspCNI | CTCAG | 4 cut(s) | 1007, 2758, 3051, 3324 |
| BspDI | ATCGAT | 1 cut(s) | 2856 |
| BspFNI | CGCG | 2 cut(s) | 1727, 2316 |
| BspHI | TCATGA | 4 cut(s) | 556, 2710, 2923, 3229 |
| BspLI | GGNNCC | 5 cut(s) | 661, 2078, 2982, 3053, 3258 |
| BspMAI | CTGCAG | 2 cut(s) | 1275, 3178 |
| BspMI | ACCTGC | 1 cut(s) | 409 |
| BspOI | GCTAGC | 1 cut(s) | 3141 |
| BspPI | GGATC | 9 cut(s) | 1038, 1173, 1251, 1569, 1845, 2177, 2975, 2988, 3252 |
| BspT107I | GGYRCC | 2 cut(s) | 659, 2076 |
| BspTI | CTTAAG | 1 cut(s) | 1369 |
| BsrDI | GCAATG | 3 cut(s) | 217, 330, 3324 |
| BsrFI | RCCGGY | 2 cut(s) | 2293, 2597 |
| BsrGI | TGTACA | 2 cut(s) | 2003, 2932 |
| BsrI | ACTGG | 2 cut(s) | 2091, 3035 |
| BssAI | RCCGGY | 2 cut(s) | 2293, 2597 |
| BssECI | CCNNGG | 9 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750, 3207 |
| BssSI | CACGAG | 1 cut(s) | 3111 |
| BssT1I | CCWWGG | 8 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750 |
| Bst2BI | CACGAG | 1 cut(s) | 3111 |
| Bst2UI | CCWGG | 4 cut(s) | 360, 2187, 2399, 2706 |
| Bst4CI | ACNGT | 9 cut(s) | 296, 310, 704, 850, 2030, 2273, 2279, 2580, 2848 |
| Bst6I | CTCTTC | 2 cut(s) | 698, 2145 |
| BstAFI | CTTAAG | 1 cut(s) | 1369 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 478 |
| BstAUI | TGTACA | 2 cut(s) | 2003, 2932 |
| BstBAI | YACGTR | 1 cut(s) | 641 |
| BstC8I | GCNNGC | 5 cut(s) | 2295, 2299, 2595, 2599, 3139 |
| BstDEI | CTNAG | 9 cut(s) | 241, 405, 686, 965, 994, 2602, 2766, 3059, 3332 |
| BstDSI | CCRYGG | 1 cut(s) | 453 |
| BstFNI | CGCG | 2 cut(s) | 1727, 2316 |
| BstH2I | RGCGCY | 1 cut(s) | 2115 |
| BstHHI | GCGC | 1 cut(s) | 2114 |
| BstMAI | GTCTC | 4 cut(s) | 997, 2084, 2451, 3279 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 478, 2313, 3138, 3167, 3176, 3323 |
| BstNI | CCWGG | 4 cut(s) | 360, 2187, 2399, 2706 |
| BstNSI | RCATGY | 7 cut(s) | 339, 679, 1456, 2301, 2597, 2615, 2939 |
| BstSCI | CCNGG | 7 cut(s) | 358, 2185, 2397, 2464, 2646, 2704, 3206 |
| BstSFI | CTRYAG | 4 cut(s) | 48, 1271, 2210, 3174 |
| BstSLI | GKGCMC | 2 cut(s) | 1218, 2081 |
| BstUI | CGCG | 2 cut(s) | 1727, 2316 |
| BstV1I | GCAGC | 5 cut(s) | 946, 2031, 3160, 3182, 3188 |
| BstV2I | GAAGAC | 4 cut(s) | 164, 1677, 2768, 3201 |
| BstX2I | RGATCY | 6 cut(s) | 1030, 1165, 1243, 1561, 1837, 2980 |
| BstYI | RGATCY | 6 cut(s) | 1030, 1165, 1243, 1561, 1837, 2980 |
| Bsu15I | ATCGAT | 1 cut(s) | 2856 |
| BsuI | GTATCC | 1 cut(s) | 857 |
| BsuRI | GGCC | 3 cut(s) | 363, 437, 766 |
| BsuTUI | ATCGAT | 1 cut(s) | 2856 |
| BtgI | CCRYGG | 1 cut(s) | 453 |
| BtrI | CACGTC | 2 cut(s) | 1845, 2949 |
| BtsI | GCAGTG | 1 cut(s) | 3139 |
| BtsIMutI | CAGTG | 2 cut(s) | 2035, 3139 |
| BtuMI | TCGCGA | 1 cut(s) | 2316 |
| BveI | ACCTGC | 1 cut(s) | 409 |
| Cac8I | GCNNGC | 5 cut(s) | 2295, 2299, 2595, 2599, 3139 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2249 |
| CciI | TCATGA | 4 cut(s) | 556, 2710, 2923, 3229 |
| CfoI | GCGC | 1 cut(s) | 2114 |
| Cfr10I | RCCGGY | 2 cut(s) | 2293, 2597 |
| Cfr13I | GGNCC | 2 cut(s) | 436, 3052 |
| ClaI | ATCGAT | 1 cut(s) | 2856 |
| CseI | GACGC | 3 cut(s) | 720, 1716, 1940 |
| Csp6I | GTAC | 5 cut(s) | 660, 1340, 2004, 2035, 2933 |
| CviQI | GTAC | 5 cut(s) | 660, 1340, 2004, 2035, 2933 |
| DdeI | CTNAG | 9 cut(s) | 241, 405, 686, 965, 994, 2602, 2766, 3059, 3332 |
| DraIII | CACNNNGTG | 1 cut(s) | 2032 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2554 |
| Eam1104I | CTCTTC | 2 cut(s) | 698, 2145 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2554 |
| EarI | CTCTTC | 2 cut(s) | 698, 2145 |
| Eco130I | CCWWGG | 8 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750 |
| Eco47I | GGWCC | 1 cut(s) | 3052 |
| Eco47III | AGCGCT | 1 cut(s) | 2113 |
| Eco57I | CTGAAG | 2 cut(s) | 651, 2780 |
| Eco72I | CACGTG | 1 cut(s) | 641 |
| EcoO109I | RGGNCCY | 1 cut(s) | 436 |
| EcoRII | CCWGG | 4 cut(s) | 358, 2185, 2397, 2704 |
| EcoT14I | CCWWGG | 8 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750 |
| EcoT22I | ATGCAT | 2 cut(s) | 474, 2303 |
| ErhI | CCWWGG | 8 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750 |
| FaqI | GGGAC | 3 cut(s) | 31, 2481, 2732 |
| FbaI | TGATCA | 3 cut(s) | 2926, 3085, 3223 |
| FblI | GTMKAC | 1 cut(s) | 3216 |
| Fnu4HI | GCNGC | 6 cut(s) | 935, 2024, 2045, 3171, 3174, 3177 |
| Fsp4HI | GCNGC | 6 cut(s) | 935, 2024, 2045, 3171, 3174, 3177 |
| GlaI | GCGC | 1 cut(s) | 2113 |
| GluI | GCNGC | 6 cut(s) | 935, 2024, 2045, 3171, 3174, 3177 |
| GsaI | CCCAGC | 1 cut(s) | 2209 |
| GsuI | CTGGAG | 2 cut(s) | 741, 2108 |
| HaeII | RGCGCY | 1 cut(s) | 2115 |
| HaeIII | GGCC | 3 cut(s) | 363, 437, 766 |
| HapII | CCGG | 5 cut(s) | 2294, 2465, 2598, 2648, 3207 |
| HgaI | GACGC | 3 cut(s) | 720, 1716, 1940 |
| HhaI | GCGC | 1 cut(s) | 2114 |
| Hin6I | GCGC | 1 cut(s) | 2112 |
| HinP1I | GCGC | 1 cut(s) | 2112 |
| HindIII | AAGCTT | 3 cut(s) | 384, 869, 967 |
| HpaII | CCGG | 5 cut(s) | 2294, 2465, 2598, 2648, 3207 |
| HphI | GGTGA | 6 cut(s) | 362, 383, 510, 2119, 2693, 3110 |
| Hpy166II | GTNNAC | 7 cut(s) | 508, 568, 1216, 2035, 2689, 3055, 3217 |
| Hpy8I | GTNNAC | 7 cut(s) | 508, 568, 1216, 2035, 2689, 3055, 3217 |
| Hpy99I | CGWCG | 1 cut(s) | 296 |
| HpyCH4III | ACNGT | 9 cut(s) | 296, 310, 704, 850, 2030, 2273, 2279, 2580, 2848 |
| HpyCH4IV | ACGT | 5 cut(s) | 140, 420, 640, 1844, 2948 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 478, 2313, 3138, 3167, 3176, 3323 |
| HpyF3I | CTNAG | 9 cut(s) | 241, 405, 686, 965, 994, 2602, 2766, 3059, 3332 |
| HpySE526I | ACGT | 5 cut(s) | 140, 420, 640, 1844, 2948 |
| HspAI | GCGC | 1 cut(s) | 2112 |
| KpnI | GGTACC | 1 cut(s) | 663 |
| KroI | GCCGGC | 2 cut(s) | 2293, 2597 |
| KroNI | GCCGGC | 2 cut(s) | 2295, 2599 |
| Ksp22I | TGATCA | 3 cut(s) | 2926, 3085, 3223 |
| LmnI | GCTCC | 2 cut(s) | 1381, 2965 |
| Lsp1109I | GCAGC | 5 cut(s) | 946, 2031, 3160, 3182, 3188 |
| MaeII | ACGT | 5 cut(s) | 140, 420, 640, 1844, 2948 |
| MaeIII | GTNAC | 3 cut(s) | 287, 2273, 2842 |
| MfeI | CAATTG | 9 cut(s) | 42, 66, 159, 1488, 1554, 1692, 1761, 1830, 1899 |
| MflI | RGATCY | 6 cut(s) | 1030, 1165, 1243, 1561, 1837, 2980 |
| MhlI | GDGCHC | 3 cut(s) | 426, 1218, 2081 |
| MluI | ACGCGT | 1 cut(s) | 1725 |
| MlyI | GAGTC | 5 cut(s) | 684, 847, 1111, 1235, 2921 |
| MmeI | TCCRAC | 4 cut(s) | 696, 1160, 2397, 3293 |
| Mph1103I | ATGCAT | 2 cut(s) | 474, 2303 |
| MroNI | GCCGGC | 2 cut(s) | 2293, 2597 |
| MroXI | GAANNNNTTC | 3 cut(s) | 321, 1131, 2139 |
| MslI | CAYNNNNRTG | 9 cut(s) | 467, 561, 617, 851, 2549, 2696, 2928, 2934, 3231 |
| MspA1I | CMGCKG | 3 cut(s) | 2587, 2822, 3173 |
| MspCI | CTTAAG | 1 cut(s) | 1369 |
| MspI | CCGG | 5 cut(s) | 2294, 2465, 2598, 2648, 3207 |
| MspR9I | CCNGG | 7 cut(s) | 360, 2187, 2399, 2466, 2648, 2706, 3208 |
| MunI | CAATTG | 9 cut(s) | 42, 66, 159, 1488, 1554, 1692, 1761, 1830, 1899 |
| MvaI | CCWGG | 4 cut(s) | 360, 2187, 2399, 2706 |
| MvnI | CGCG | 2 cut(s) | 1727, 2316 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 478, 2313, 3138, 3167, 3176, 3323 |
| NaeI | GCCGGC | 2 cut(s) | 2295, 2599 |
| NciI | CCSGG | 3 cut(s) | 2466, 2648, 3208 |
| NcoI | CCATGG | 1 cut(s) | 453 |
| NgoMIV | GCCGGC | 2 cut(s) | 2293, 2597 |
| NheI | GCTAGC | 1 cut(s) | 3137 |
| NlaIV | GGNNCC | 5 cut(s) | 661, 2078, 2982, 3053, 3258 |
| NmuCI | GTSAC | 2 cut(s) | 2273, 2842 |
| NruI | TCGCGA | 1 cut(s) | 2316 |
| NsiI | ATGCAT | 2 cut(s) | 474, 2303 |
| NspI | RCATGY | 7 cut(s) | 339, 679, 1456, 2301, 2597, 2615, 2939 |
| OliI | CACNNNNGTG | 1 cut(s) | 2696 |
| PaeI | GCATGC | 2 cut(s) | 2301, 2597 |
| PagI | TCATGA | 4 cut(s) | 556, 2710, 2923, 3229 |
| PciI | ACATGT | 2 cut(s) | 1452, 2935 |
| PdiI | GCCGGC | 2 cut(s) | 2295, 2599 |
| PdmI | GAANNNNTTC | 3 cut(s) | 321, 1131, 2139 |
| PflFI | GACNNNGTC | 1 cut(s) | 2911 |
| PfoI | TCCNGGA | 2 cut(s) | 2464, 2646 |
| PkrI | GCNGC | 6 cut(s) | 936, 2025, 2046, 3172, 3175, 3178 |
| PleI | GAGTC | 5 cut(s) | 684, 846, 1110, 1234, 2920 |
| PmaCI | CACGTG | 1 cut(s) | 641 |
| PmlI | CACGTG | 1 cut(s) | 641 |
| PpsI | GAGTC | 5 cut(s) | 684, 846, 1110, 1234, 2920 |
| Ppu21I | YACGTR | 1 cut(s) | 641 |
| PscI | ACATGT | 2 cut(s) | 1452, 2935 |
| Psp6I | CCWGG | 4 cut(s) | 358, 2185, 2397, 2704 |
| PspCI | CACGTG | 1 cut(s) | 641 |
| PspFI | CCCAGC | 1 cut(s) | 2205 |
| PspGI | CCWGG | 4 cut(s) | 358, 2185, 2397, 2704 |
| PspN4I | GGNNCC | 5 cut(s) | 661, 2078, 2982, 3053, 3258 |
| PspPI | GGNCC | 2 cut(s) | 436, 3052 |
| PstI | CTGCAG | 2 cut(s) | 1275, 3178 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2249 |
| PsuI | RGATCY | 6 cut(s) | 1030, 1165, 1243, 1561, 1837, 2980 |
| PsyI | GACNNNGTC | 1 cut(s) | 2911 |
| PvuII | CAGCTG | 2 cut(s) | 2587, 3173 |
| RruI | TCGCGA | 1 cut(s) | 2316 |
| RsaI | GTAC | 5 cut(s) | 661, 1341, 2005, 2036, 2934 |
| RsaNI | GTAC | 5 cut(s) | 660, 1340, 2004, 2035, 2933 |
| RseI | CAYNNNNRTG | 9 cut(s) | 467, 561, 617, 851, 2549, 2696, 2928, 2934, 3231 |
| SatI | GCNGC | 6 cut(s) | 935, 2024, 2045, 3171, 3174, 3177 |
| Sau96I | GGNCC | 2 cut(s) | 436, 3052 |
| SchI | GAGTC | 5 cut(s) | 684, 847, 1111, 1235, 2921 |
| ScrFI | CCNGG | 7 cut(s) | 360, 2187, 2399, 2466, 2648, 2706, 3208 |
| SduI | GDGCHC | 3 cut(s) | 426, 1218, 2081 |
| SfcI | CTRYAG | 4 cut(s) | 48, 1271, 2210, 3174 |
| SinI | GGWCC | 1 cut(s) | 3052 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 467, 561, 617, 851, 2549, 2696, 2928, 2934, 3231 |
| SmlI | CTYRAG | 4 cut(s) | 748, 1193, 1369, 1507 |
| SmoI | CTYRAG | 4 cut(s) | 748, 1193, 1369, 1507 |
| SpeI | ACTAGT | 1 cut(s) | 20 |
| SphI | GCATGC | 2 cut(s) | 2301, 2597 |
| SsiI | CCGC | 3 cut(s) | 394, 2024, 2820 |
| SspI | AATATT | 1 cut(s) | 915 |
| StyD4I | CCNGG | 7 cut(s) | 358, 2185, 2397, 2464, 2646, 2704, 3206 |
| StyI | CCWWGG | 8 cut(s) | 453, 833, 1299, 1437, 1572, 1848, 2099, 2750 |
| TaaI | ACNGT | 9 cut(s) | 296, 310, 704, 850, 2030, 2273, 2279, 2580, 2848 |
| TaiI | ACGT | 5 cut(s) | 143, 423, 643, 1847, 2951 |
| TaqI | TCGA | 6 cut(s) | 107, 1083, 2268, 2558, 2856, 2992 |
| TatI | WGTACW | 2 cut(s) | 2003, 2932 |
| TauI | GCSGC | 1 cut(s) | 2026 |
| TscAI | CASTG | 2 cut(s) | 2035, 3139 |
| TseFI | GTSAC | 2 cut(s) | 2273, 2842 |
| TseI | GCWGC | 5 cut(s) | 934, 2044, 3170, 3173, 3176 |
| Tsp45I | GTSAC | 2 cut(s) | 2273, 2842 |
| TspGWI | ACGGA | 1 cut(s) | 2052 |
| TspRI | CASTG | 2 cut(s) | 2035, 3139 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2911 |
| Vha464I | CTTAAG | 1 cut(s) | 1369 |
| VneI | GTGCAC | 1 cut(s) | 1214 |
| VpaK11BI | GGWCC | 1 cut(s) | 3052 |
| XapI | RAATTY | 9 cut(s) | 77, 103, 318, 1048, 1198, 1924, 2309, 2432, 2733 |
| XbaI | TCTAGA | 3 cut(s) | 2053, 2062, 2356 |
| XceI | RCATGY | 7 cut(s) | 339, 679, 1456, 2301, 2597, 2615, 2939 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1237 |
| XmaJI | CCTAGG | 1 cut(s) | 833 |
| XmiI | GTMKAC | 1 cut(s) | 3216 |
| XmnI | GAANNNNTTC | 3 cut(s) | 321, 1131, 2139 |
| Zsp2I | ATGCAT | 2 cut(s) | 474, 2303 |