TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 133 - 214 | 5.3e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 159 - 232 | 1.4e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 201 - 344 | 6.4e-16 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 221 - 289 | 6.6e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 602 |
| AciI | CCGC | 1 cut(s) | 348 |
| AclWI | GGATC | 1 cut(s) | 768 |
| AcsI | RAATTY | 5 cut(s) | 175, 434, 657, 817, 879 |
| AfaI | GTAC | 1 cut(s) | 214 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 522 |
| AflIII | ACRYGT | 2 cut(s) | 191, 922 |
| AluBI | AGCT | 3 cut(s) | 255, 427, 919 |
| AluI | AGCT | 3 cut(s) | 255, 427, 919 |
| Alw21I | GWGCWC | 1 cut(s) | 930 |
| AlwI | GGATC | 1 cut(s) | 768 |
| ApeKI | GCWGC | 1 cut(s) | 798 |
| ApoI | RAATTY | 5 cut(s) | 175, 434, 657, 817, 879 |
| AspLEI | GCGC | 1 cut(s) | 603 |
| AspS9I | GGNCC | 2 cut(s) | 547, 825 |
| AsuHPI | GGTGA | 1 cut(s) | 851 |
| AsuII | TTCGAA | 1 cut(s) | 884 |
| AvaII | GGWCC | 2 cut(s) | 547, 825 |
| Bbv12I | GWGCWC | 1 cut(s) | 930 |
| BbvI | GCAGC | 1 cut(s) | 810 |
| BccI | CCATC | 3 cut(s) | 451, 664, 887 |
| BceAI | ACGGC | 1 cut(s) | 715 |
| BfaI | CTAG | 3 cut(s) | 221, 252, 662 |
| BfmI | CTRYAG | 1 cut(s) | 396 |
| BglII | AGATCT | 1 cut(s) | 685 |
| BisI | GCNGC | 1 cut(s) | 799 |
| BlsI | GCNGC | 1 cut(s) | 800 |
| Bme18I | GGWCC | 2 cut(s) | 547, 825 |
| BmgT120I | GGNCC | 2 cut(s) | 547, 825 |
| BmiI | GGNNCC | 2 cut(s) | 300, 827 |
| BmsI | GCATC | 3 cut(s) | 517, 620, 932 |
| BpmI | CTGGAG | 1 cut(s) | 42 |
| Bpu14I | TTCGAA | 1 cut(s) | 884 |
| BpuEI | CTTGAG | 3 cut(s) | 259, 629, 700 |
| BsaAI | YACGTR | 1 cut(s) | 923 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 522 |
| Bse1I | ACTGG | 1 cut(s) | 46 |
| Bse3DI | GCAATG | 1 cut(s) | 89 |
| BseGI | GGATG | 5 cut(s) | 11, 215, 508, 727, 947 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 522 |
| BseMI | GCAATG | 1 cut(s) | 89 |
| BseNI | ACTGG | 1 cut(s) | 46 |
| BseXI | GCAGC | 1 cut(s) | 810 |
| BseYI | CCCAGC | 1 cut(s) | 987 |
| BsgI | GTGCAG | 1 cut(s) | 817 |
| BsiHKAI | GWGCWC | 1 cut(s) | 930 |
| BslFI | GGGAC | 2 cut(s) | 180, 811 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 522 |
| BsmFI | GGGAC | 2 cut(s) | 180, 811 |
| BsmI | GAATGC | 1 cut(s) | 848 |
| Bsp119I | TTCGAA | 1 cut(s) | 884 |
| Bsp1286I | GDGCHC | 1 cut(s) | 930 |
| Bsp1407I | TGTACA | 1 cut(s) | 212 |
| Bsp143I | GATC | 3 cut(s) | 685, 760, 1009 |
| BspACI | CCGC | 1 cut(s) | 348 |
| BspLI | GGNNCC | 2 cut(s) | 300, 827 |
| BspPI | GGATC | 1 cut(s) | 768 |
| BspT104I | TTCGAA | 1 cut(s) | 884 |
| BsrDI | GCAATG | 1 cut(s) | 89 |
| BsrGI | TGTACA | 1 cut(s) | 212 |
| BsrI | ACTGG | 1 cut(s) | 46 |
| BssMI | GATC | 3 cut(s) | 685, 760, 1009 |
| Bst4CI | ACNGT | 3 cut(s) | 560, 795, 825 |
| Bst6I | CTCTTC | 1 cut(s) | 447 |
| BstAUI | TGTACA | 1 cut(s) | 212 |
| BstBAI | YACGTR | 1 cut(s) | 923 |
| BstBI | TTCGAA | 1 cut(s) | 884 |
| BstF5I | GGATG | 5 cut(s) | 11, 215, 508, 727, 947 |
| BstHHI | GCGC | 1 cut(s) | 603 |
| BstKTI | GATC | 3 cut(s) | 688, 763, 1012 |
| BstMBI | GATC | 3 cut(s) | 685, 760, 1009 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 64, 532, 620, 925 |
| BstNSI | RCATGY | 1 cut(s) | 195 |
| BstSFI | CTRYAG | 1 cut(s) | 396 |
| BstV1I | GCAGC | 1 cut(s) | 810 |
| BstX2I | RGATCY | 2 cut(s) | 685, 760 |
| BstYI | RGATCY | 2 cut(s) | 685, 760 |
| BtsCI | GGATG | 5 cut(s) | 11, 215, 508, 727, 947 |
| BtsI | GCAGTG | 1 cut(s) | 709 |
| BtsIMutI | CAGTG | 1 cut(s) | 709 |
| CfoI | GCGC | 1 cut(s) | 603 |
| Cfr13I | GGNCC | 2 cut(s) | 547, 825 |
| Csp6I | GTAC | 1 cut(s) | 213 |
| CviAII | CATG | 1 cut(s) | 192 |
| CviQI | GTAC | 1 cut(s) | 213 |
| DpnI | GATC | 3 cut(s) | 687, 762, 1011 |
| DpnII | GATC | 3 cut(s) | 685, 760, 1009 |
| Eam1104I | CTCTTC | 1 cut(s) | 447 |
| EarI | CTCTTC | 1 cut(s) | 447 |
| Eco47I | GGWCC | 2 cut(s) | 547, 825 |
| FaeI | CATG | 1 cut(s) | 195 |
| FaqI | GGGAC | 2 cut(s) | 180, 811 |
| FatI | CATG | 1 cut(s) | 191 |
| Fnu4HI | GCNGC | 1 cut(s) | 799 |
| FokI | GGATG | 4 cut(s) | 202, 495, 734, 954 |
| Fsp4HI | GCNGC | 1 cut(s) | 799 |
| FspBI | CTAG | 3 cut(s) | 221, 252, 662 |
| FspI | TGCGCA | 1 cut(s) | 602 |
| GlaI | GCGC | 1 cut(s) | 602 |
| GluI | GCNGC | 1 cut(s) | 799 |
| GsaI | CCCAGC | 1 cut(s) | 991 |
| GsuI | CTGGAG | 1 cut(s) | 42 |
| HhaI | GCGC | 1 cut(s) | 603 |
| Hin1II | CATG | 1 cut(s) | 195 |
| Hin6I | GCGC | 1 cut(s) | 601 |
| HinP1I | GCGC | 1 cut(s) | 601 |
| HindIII | AAGCTT | 1 cut(s) | 425 |
| HinfI | GANTC | 7 cut(s) | 121, 246, 305, 315, 674, 725, 976 |
| HphI | GGTGA | 1 cut(s) | 851 |
| Hpy188I | TCNGA | 4 cut(s) | 442, 769, 860, 958 |
| Hpy188III | TCNNGA | 9 cut(s) | 21, 183, 233, 302, 466, 608, 970, 980, 1017 |
| HpyAV | CCTTC | 1 cut(s) | 839 |
| HpyCH4III | ACNGT | 3 cut(s) | 560, 795, 825 |
| HpyCH4IV | ACGT | 2 cut(s) | 169, 922 |
| HpyCH4V | TGCA | 9 cut(s) | 67, 82, 322, 495, 508, 774, 798, 814, 945 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 64, 532, 620, 925 |
| HpySE526I | ACGT | 2 cut(s) | 169, 922 |
| Hsp92II | CATG | 1 cut(s) | 195 |
| HspAI | GCGC | 1 cut(s) | 601 |
| Kzo9I | GATC | 3 cut(s) | 685, 760, 1009 |
| Lsp1109I | GCAGC | 1 cut(s) | 810 |
| LweI | GCATC | 3 cut(s) | 517, 620, 932 |
| MaeI | CTAG | 3 cut(s) | 221, 252, 662 |
| MaeII | ACGT | 2 cut(s) | 169, 922 |
| MaeIII | GTNAC | 2 cut(s) | 331, 704 |
| MalI | GATC | 3 cut(s) | 687, 762, 1011 |
| MboI | GATC | 3 cut(s) | 685, 760, 1009 |
| MboII | GAAGA | 3 cut(s) | 18, 443, 464 |
| MfeI | CAATTG | 1 cut(s) | 729 |
| MflI | RGATCY | 2 cut(s) | 685, 760 |
| MhlI | GDGCHC | 1 cut(s) | 930 |
| MlyI | GAGTC | 2 cut(s) | 734, 970 |
| MmeI | TCCRAC | 4 cut(s) | 66, 246, 525, 890 |
| MnlI | CCTC | 5 cut(s) | 45, 157, 217, 289, 604 |
| MseI | TTAA | 3 cut(s) | 203, 498, 696 |
| MslI | CAYNNNNRTG | 3 cut(s) | 157, 837, 1000 |
| MunI | CAATTG | 1 cut(s) | 729 |
| Mva1269I | GAATGC | 1 cut(s) | 848 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 64, 532, 620, 925 |
| NdeII | GATC | 3 cut(s) | 685, 760, 1009 |
| NlaIII | CATG | 1 cut(s) | 195 |
| NlaIV | GGNNCC | 2 cut(s) | 300, 827 |
| NmuCI | GTSAC | 1 cut(s) | 704 |
| NsbI | TGCGCA | 1 cut(s) | 602 |
| NspI | RCATGY | 1 cut(s) | 195 |
| NspV | TTCGAA | 1 cut(s) | 884 |
| PciI | ACATGT | 1 cut(s) | 191 |
| PctI | GAATGC | 1 cut(s) | 848 |
| PfeI | GAWTC | 5 cut(s) | 121, 246, 305, 315, 674 |
| PkrI | GCNGC | 1 cut(s) | 800 |
| PleI | GAGTC | 2 cut(s) | 733, 970 |
| PpsI | GAGTC | 2 cut(s) | 733, 970 |
| Ppu21I | YACGTR | 1 cut(s) | 923 |
| PscI | ACATGT | 1 cut(s) | 191 |
| PspFI | CCCAGC | 1 cut(s) | 987 |
| PspN4I | GGNNCC | 2 cut(s) | 300, 827 |
| PspPI | GGNCC | 2 cut(s) | 547, 825 |
| PsuI | RGATCY | 2 cut(s) | 685, 760 |
| RsaI | GTAC | 1 cut(s) | 214 |
| RsaNI | GTAC | 1 cut(s) | 213 |
| RseI | CAYNNNNRTG | 3 cut(s) | 157, 837, 1000 |
| SaqAI | TTAA | 3 cut(s) | 203, 498, 696 |
| SatI | GCNGC | 1 cut(s) | 799 |
| Sau3AI | GATC | 3 cut(s) | 685, 760, 1009 |
| Sau96I | GGNCC | 2 cut(s) | 547, 825 |
| SchI | GAGTC | 2 cut(s) | 734, 970 |
| SduI | GDGCHC | 1 cut(s) | 930 |
| SfaNI | GCATC | 3 cut(s) | 517, 620, 932 |
| SfcI | CTRYAG | 1 cut(s) | 396 |
| SfuI | TTCGAA | 1 cut(s) | 884 |
| SinI | GGWCC | 2 cut(s) | 547, 825 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 157, 837, 1000 |
| SmlI | CTYRAG | 3 cut(s) | 238, 608, 679 |
| SmoI | CTYRAG | 3 cut(s) | 238, 608, 679 |
| SsiI | CCGC | 1 cut(s) | 348 |
| SspI | AATATT | 2 cut(s) | 589, 755 |
| SspMI | CTAG | 3 cut(s) | 221, 252, 662 |
| TaaI | ACNGT | 3 cut(s) | 560, 795, 825 |
| TaiI | ACGT | 2 cut(s) | 172, 925 |
| TaqI | TCGA | 3 cut(s) | 313, 884, 891 |
| TatI | WGTACW | 1 cut(s) | 212 |
| TfiI | GAWTC | 5 cut(s) | 121, 246, 305, 315, 674 |
| Tru1I | TTAA | 3 cut(s) | 203, 498, 696 |
| Tru9I | TTAA | 3 cut(s) | 203, 498, 696 |
| TscAI | CASTG | 1 cut(s) | 709 |
| TseFI | GTSAC | 1 cut(s) | 704 |
| TseI | GCWGC | 1 cut(s) | 798 |
| Tsp45I | GTSAC | 1 cut(s) | 704 |
| TspDTI | ATGAA | 3 cut(s) | 212, 291, 821 |
| TspGWI | ACGGA | 3 cut(s) | 66, 501, 569 |
| TspRI | CASTG | 1 cut(s) | 709 |
| VpaK11BI | GGWCC | 2 cut(s) | 547, 825 |
| XapI | RAATTY | 5 cut(s) | 175, 434, 657, 817, 879 |
| XceI | RCATGY | 1 cut(s) | 195 |
| XspI | CTAG | 3 cut(s) | 221, 252, 662 |