TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 20 - 157 | 4.1e-15 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 140 - 228 | 2.1e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 170 - 245 | 8.4e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 215 - 298 | 3.7e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 240 - 316 | 2.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 297 - 369 | 1.1e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 310 - 386 | 2e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 357 - 439 | 1.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 381 - 457 | 9.5e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 438 - 510 | 4.4e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 451 - 528 | 3.4e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 498 - 581 | 1.5e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 522 - 581 | 1e-05 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 589 - 661 | 1.1e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 647 - 809 | 1.1e-18 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 663 - 722 | 1.2e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 1936 |
| AccIII | TCCGGA | 2 cut(s) | 466, 2422 |
| AciI | CCGC | 4 cut(s) | 2380, 2395, 2519, 2592 |
| AclI | AACGTT | 1 cut(s) | 2439 |
| AcoI | YGGCCR | 1 cut(s) | 13 |
| AcuI | CTGAAG | 1 cut(s) | 1730 |
| AcyI | GRCGYC | 1 cut(s) | 2522 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 190, 499, 2231 |
| AjnI | CCWGG | 2 cut(s) | 2453, 2500 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 81, 113 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2501 |
| Aor13HI | TCCGGA | 2 cut(s) | 466, 2422 |
| AoxI | GGCC | 1 cut(s) | 13 |
| AspLEI | GCGC | 1 cut(s) | 1936 |
| AspS9I | GGNCC | 1 cut(s) | 180 |
| AsuC2I | CCSGG | 1 cut(s) | 2596 |
| AsuHPI | GGTGA | 2 cut(s) | 206, 2353 |
| AvaII | GGWCC | 1 cut(s) | 180 |
| BalI | TGGCCA | 1 cut(s) | 15 |
| BbsI | GAAGAC | 4 cut(s) | 383, 1011, 1434, 2339 |
| BceAI | ACGGC | 1 cut(s) | 2512 |
| BciT130I | CCWGG | 2 cut(s) | 2455, 2502 |
| BcnI | CCSGG | 1 cut(s) | 2596 |
| BfaI | CTAG | 1 cut(s) | 2231 |
| BfmI | CTRYAG | 1 cut(s) | 275 |
| BglII | AGATCT | 1 cut(s) | 1858 |
| Bme1390I | CCNGG | 3 cut(s) | 2455, 2502, 2596 |
| Bme18I | GGWCC | 1 cut(s) | 180 |
| BmgT120I | GGNCC | 1 cut(s) | 180 |
| BmiI | GGNNCC | 2 cut(s) | 181, 182 |
| BmrFI | CCNGG | 3 cut(s) | 2455, 2502, 2596 |
| BmrI | ACTGGG | 1 cut(s) | 2064 |
| BmuI | ACTGGG | 1 cut(s) | 2064 |
| BpiI | GAAGAC | 4 cut(s) | 383, 1011, 1434, 2339 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2468, 2500 |
| BpmI | CTGGAG | 3 cut(s) | 469, 2492, 2523 |
| BpuEI | CTTGAG | 9 cut(s) | 71, 742, 952, 977, 1165, 1375, 1400, 1588, 1798 |
| BpuMI | CCSGG | 1 cut(s) | 2596 |
| BsaBI | GATNNNNATC | 1 cut(s) | 114 |
| BsaHI | GRCGYC | 1 cut(s) | 2522 |
| BsaJI | CCNNGG | 4 cut(s) | 457, 2413, 2454, 2595 |
| BsaWI | WCCGGW | 2 cut(s) | 466, 2422 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 190, 499, 2231 |
| Bse8I | GATNNNNATC | 1 cut(s) | 114 |
| BseAI | TCCGGA | 2 cut(s) | 466, 2422 |
| BseBI | CCWGG | 2 cut(s) | 2455, 2502 |
| BseDI | CCNNGG | 4 cut(s) | 457, 2413, 2454, 2595 |
| BseJI | GATNNNNATC | 1 cut(s) | 114 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 190, 499, 2231 |
| BseRI | GAGGAG | 1 cut(s) | 2489 |
| BseYI | CCCAGC | 3 cut(s) | 342, 2298, 2554 |
| BsgI | GTGCAG | 9 cut(s) | 172, 646, 859, 1069, 1282, 1492, 1705, 1915, 2128 |
| Bsh1236I | CGCG | 1 cut(s) | 1936 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2384 |
| BshFI | GGCC | 1 cut(s) | 15 |
| BsiEI | CGRYCG | 1 cut(s) | 2384 |
| BsiSI | CCGG | 3 cut(s) | 467, 2423, 2595 |
| BslFI | GGGAC | 1 cut(s) | 166 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 190, 499, 2231 |
| BsmBI | CGTCTC | 6 cut(s) | 505, 718, 928, 1141, 1351, 1564 |
| BsmFI | GGGAC | 1 cut(s) | 166 |
| BsmI | GAATGC | 2 cut(s) | 203, 2159 |
| BsnI | GGCC | 1 cut(s) | 15 |
| Bsp13I | TCCGGA | 2 cut(s) | 466, 2422 |
| BspACI | CCGC | 4 cut(s) | 2380, 2395, 2519, 2592 |
| BspANI | GGCC | 1 cut(s) | 15 |
| BspEI | TCCGGA | 2 cut(s) | 466, 2422 |
| BspFNI | CGCG | 1 cut(s) | 1936 |
| BspLI | GGNNCC | 2 cut(s) | 181, 182 |
| BspQI | GCTCTTC | 1 cut(s) | 2532 |
| BssECI | CCNNGG | 4 cut(s) | 457, 2413, 2454, 2595 |
| BssNI | GRCGYC | 1 cut(s) | 2522 |
| Bst2UI | CCWGG | 2 cut(s) | 2455, 2502 |
| Bst6I | CTCTTC | 5 cut(s) | 576, 789, 1635, 1845, 2532 |
| BstACI | GRCGYC | 1 cut(s) | 2522 |
| BstC8I | GCNNGC | 3 cut(s) | 400, 2356, 2603 |
| BstDEI | CTNAG | 6 cut(s) | 119, 494, 593, 1016, 1439, 1862 |
| BstFNI | CGCG | 1 cut(s) | 1936 |
| BstHHI | GCGC | 1 cut(s) | 1936 |
| BstMCI | CGRYCG | 1 cut(s) | 2384 |
| BstNI | CCWGG | 2 cut(s) | 2455, 2502 |
| BstSCI | CCNGG | 3 cut(s) | 2453, 2500, 2594 |
| BstSFI | CTRYAG | 1 cut(s) | 275 |
| BstUI | CGCG | 1 cut(s) | 1936 |
| BstV2I | GAAGAC | 4 cut(s) | 383, 1011, 1434, 2339 |
| BsuRI | GGCC | 1 cut(s) | 15 |
| BtsI | GCAGTG | 7 cut(s) | 64, 751, 1174, 1597, 1807, 2020, 2586 |
| Cac8I | GCNNGC | 3 cut(s) | 400, 2356, 2603 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2501 |
| CfoI | GCGC | 1 cut(s) | 1936 |
| Cfr13I | GGNCC | 1 cut(s) | 180 |
| CseI | GACGC | 2 cut(s) | 367, 2511 |
| CviAII | CATG | 1 cut(s) | 2616 |
| DdeI | CTNAG | 6 cut(s) | 119, 494, 593, 1016, 1439, 1862 |
| EaeI | YGGCCR | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 5 cut(s) | 576, 789, 1635, 1845, 2532 |
| EarI | CTCTTC | 5 cut(s) | 576, 789, 1635, 1845, 2532 |
| Eco47I | GGWCC | 1 cut(s) | 180 |
| Eco57I | CTGAAG | 1 cut(s) | 1730 |
| EcoO109I | RGGNCCY | 1 cut(s) | 180 |
| EcoRI | GAATTC | 2 cut(s) | 462, 2418 |
| EcoRII | CCWGG | 2 cut(s) | 2453, 2500 |
| Esp3I | CGTCTC | 6 cut(s) | 505, 718, 928, 1141, 1351, 1564 |
| FaeI | CATG | 1 cut(s) | 2619 |
| FaqI | GGGAC | 1 cut(s) | 166 |
| FatI | CATG | 1 cut(s) | 2615 |
| FauI | CCCGC | 1 cut(s) | 2388 |
| FspBI | CTAG | 1 cut(s) | 2231 |
| GlaI | GCGC | 1 cut(s) | 1935 |
| GsaI | CCCAGC | 3 cut(s) | 346, 2302, 2558 |
| GsuI | CTGGAG | 3 cut(s) | 469, 2492, 2523 |
| HaeIII | GGCC | 1 cut(s) | 15 |
| HapII | CCGG | 3 cut(s) | 467, 2423, 2595 |
| HgaI | GACGC | 2 cut(s) | 367, 2511 |
| HhaI | GCGC | 1 cut(s) | 1936 |
| Hin1I | GRCGYC | 1 cut(s) | 2522 |
| Hin1II | CATG | 1 cut(s) | 2619 |
| Hin6I | GCGC | 1 cut(s) | 1934 |
| HinP1I | GCGC | 1 cut(s) | 1934 |
| HincII | GTYRAC | 1 cut(s) | 490 |
| HindII | GTYRAC | 1 cut(s) | 490 |
| HindIII | AAGCTT | 3 cut(s) | 866, 1289, 1712 |
| HpaII | CCGG | 3 cut(s) | 467, 2423, 2595 |
| HphI | GGTGA | 2 cut(s) | 206, 2353 |
| Hpy166II | GTNNAC | 1 cut(s) | 490 |
| Hpy188I | TCNGA | 8 cut(s) | 293, 313, 458, 1710, 2171, 2269, 2414, 2574 |
| Hpy8I | GTNNAC | 1 cut(s) | 490 |
| Hpy99I | CGWCG | 1 cut(s) | 2527 |
| HpyAV | CCTTC | 3 cut(s) | 433, 944, 1367 |
| HpyCH4IV | ACGT | 1 cut(s) | 2439 |
| HpyF3I | CTNAG | 6 cut(s) | 119, 494, 593, 1016, 1439, 1862 |
| HpySE526I | ACGT | 1 cut(s) | 2439 |
| Hsp92I | GRCGYC | 1 cut(s) | 2522 |
| Hsp92II | CATG | 1 cut(s) | 2619 |
| HspAI | GCGC | 1 cut(s) | 1934 |
| KflI | GGGWCCC | 1 cut(s) | 180 |
| Kpn2I | TCCGGA | 2 cut(s) | 466, 2422 |
| LguI | GCTCTTC | 1 cut(s) | 2532 |
| LmnI | GCTCC | 4 cut(s) | 469, 2162, 2425, 2504 |
| MaeI | CTAG | 1 cut(s) | 2231 |
| MaeII | ACGT | 1 cut(s) | 2439 |
| MaeIII | GTNAC | 7 cut(s) | 59, 533, 746, 956, 1169, 1379, 1592 |
| MlsI | TGGCCA | 1 cut(s) | 15 |
| MluNI | TGGCCA | 1 cut(s) | 15 |
| MmeI | TCCRAC | 5 cut(s) | 245, 567, 780, 1626, 2201 |
| Mox20I | TGGCCA | 1 cut(s) | 15 |
| MroI | TCCGGA | 2 cut(s) | 466, 2422 |
| MscI | TGGCCA | 1 cut(s) | 15 |
| MseI | TTAA | 9 cut(s) | 525, 738, 1161, 1584, 1794, 1919, 1929, 2007, 2319 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2311 |
| Msp20I | TGGCCA | 1 cut(s) | 15 |
| MspI | CCGG | 3 cut(s) | 467, 2423, 2595 |
| MspR9I | CCNGG | 3 cut(s) | 2455, 2502, 2596 |
| Mva1269I | GAATGC | 2 cut(s) | 203, 2159 |
| MvaI | CCWGG | 2 cut(s) | 2455, 2502 |
| MvnI | CGCG | 1 cut(s) | 1936 |
| NciI | CCSGG | 1 cut(s) | 2596 |
| NlaIII | CATG | 1 cut(s) | 2619 |
| NlaIV | GGNNCC | 2 cut(s) | 181, 182 |
| NmuCI | GTSAC | 5 cut(s) | 59, 533, 746, 1169, 1592 |
| PciSI | GCTCTTC | 1 cut(s) | 2532 |
| PctI | GAATGC | 2 cut(s) | 203, 2159 |
| PfoI | TCCNGGA | 1 cut(s) | 2500 |
| PpuMI | RGGWCCY | 1 cut(s) | 180 |
| Psp1406I | AACGTT | 1 cut(s) | 2439 |
| Psp5II | RGGWCCY | 1 cut(s) | 180 |
| Psp6I | CCWGG | 2 cut(s) | 2453, 2500 |
| PspFI | CCCAGC | 3 cut(s) | 342, 2298, 2554 |
| PspGI | CCWGG | 2 cut(s) | 2453, 2500 |
| PspN4I | GGNNCC | 2 cut(s) | 181, 182 |
| PspPI | GGNCC | 1 cut(s) | 180 |
| PspPPI | RGGWCCY | 1 cut(s) | 180 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2501 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2311 |
| SapI | GCTCTTC | 1 cut(s) | 2532 |
| SaqAI | TTAA | 9 cut(s) | 525, 738, 1161, 1584, 1794, 1919, 1929, 2007, 2319 |
| Sau96I | GGNCC | 1 cut(s) | 180 |
| ScrFI | CCNGG | 3 cut(s) | 2455, 2502, 2596 |
| SfcI | CTRYAG | 1 cut(s) | 275 |
| SinI | GGWCC | 1 cut(s) | 180 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2311 |
| SmlI | CTYRAG | 9 cut(s) | 50, 721, 931, 992, 1144, 1354, 1415, 1567, 1777 |
| SmoI | CTYRAG | 9 cut(s) | 50, 721, 931, 992, 1144, 1354, 1415, 1567, 1777 |
| SsiI | CCGC | 4 cut(s) | 2380, 2395, 2519, 2592 |
| SspI | AATATT | 1 cut(s) | 2066 |
| SspMI | CTAG | 1 cut(s) | 2231 |
| StyD4I | CCNGG | 3 cut(s) | 2453, 2500, 2594 |
| TaiI | ACGT | 1 cut(s) | 2442 |
| TaqI | TCGA | 4 cut(s) | 336, 2202, 2388, 2486 |
| TauI | GCSGC | 2 cut(s) | 2522, 2594 |
| Tru1I | TTAA | 9 cut(s) | 525, 738, 1161, 1584, 1794, 1919, 1929, 2007, 2319 |
| Tru9I | TTAA | 9 cut(s) | 525, 738, 1161, 1584, 1794, 1919, 1929, 2007, 2319 |
| TseFI | GTSAC | 5 cut(s) | 59, 533, 746, 1169, 1592 |
| Tsp45I | GTSAC | 5 cut(s) | 59, 533, 746, 1169, 1592 |
| TspDTI | ATGAA | 1 cut(s) | 2250 |
| VpaK11BI | GGWCC | 1 cut(s) | 180 |
| XspI | CTAG | 1 cut(s) | 2231 |