TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 22 - 191 | 2e-54 | TIR domain |
| TIR_2 | PF13676 | 24 - 120 | 3.8e-17 | TIR domain |
| NB-ARC | PF00931 | 203 - 369 | 7.4e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 439 - 508 | 5.6e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_8 | PF13855 | 717 - 776 | 1.1e-06 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 348 |
| AatII | GACGTC | 2 cut(s) | 1913, 2503 |
| Acc65I | GGTACC | 1 cut(s) | 372 |
| AccB1I | GGYRCC | 2 cut(s) | 372, 2273 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 133 |
| AccI | GTMKAC | 1 cut(s) | 2022 |
| AccII | CGCG | 1 cut(s) | 1876 |
| AccIII | TCCGGA | 2 cut(s) | 56, 2608 |
| AciI | CCGC | 4 cut(s) | 507, 687, 1311, 2533 |
| AclI | AACGTT | 1 cut(s) | 155 |
| AclWI | GGATC | 5 cut(s) | 350, 414, 878, 1510, 2456 |
| AcoI | YGGCCR | 3 cut(s) | 3, 1232, 1308 |
| AcsI | RAATTY | 9 cut(s) | 230, 1272, 1470, 1698, 1945, 1989, 2014, 2236, 2365 |
| AcuI | CTGAAG | 2 cut(s) | 191, 2096 |
| AcyI | GRCGYC | 2 cut(s) | 1910, 2500 |
| AfaI | GTAC | 9 cut(s) | 40, 125, 369, 374, 1155, 1428, 1839, 2034, 2381 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 133, 273, 1415, 1904, 1905, 2017 |
| AflIII | ACRYGT | 2 cut(s) | 640, 2263 |
| AjiI | CACGTC | 1 cut(s) | 922 |
| AjnI | CCWGG | 1 cut(s) | 976 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 522, 554, 2049, 2081 |
| Alw21I | GWGCWC | 2 cut(s) | 1578, 2635 |
| Alw26I | GTCTC | 1 cut(s) | 615 |
| Alw44I | GTGCAC | 1 cut(s) | 1574 |
| AlwI | GGATC | 5 cut(s) | 350, 414, 878, 1510, 2456 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2421 |
| Aor13HI | TCCGGA | 2 cut(s) | 56, 2608 |
| AoxI | GGCC | 8 cut(s) | 3, 115, 973, 1171, 1232, 1308, 1399, 1440 |
| ApaLI | GTGCAC | 1 cut(s) | 1574 |
| ApeKI | GCWGC | 5 cut(s) | 197, 200, 473, 1238, 2581 |
| ApoI | RAATTY | 9 cut(s) | 230, 1272, 1470, 1698, 1945, 1989, 2014, 2236, 2365 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2378, 2410, 2579, 2611 |
| AseI | ATTAAT | 1 cut(s) | 2567 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1329 |
| Asp718I | GGTACC | 1 cut(s) | 372 |
| AspS9I | GGNCC | 3 cut(s) | 974, 1441, 2606 |
| AsuC2I | CCSGG | 4 cut(s) | 1410, 1539, 2271, 2599 |
| AsuHPI | GGTGA | 7 cut(s) | 101, 404, 1244, 1518, 1905, 2152, 2464 |
| AvaII | GGWCC | 1 cut(s) | 2606 |
| BaeGI | GKGCMC | 3 cut(s) | 1578, 2177, 2276 |
| BalI | TGGCCA | 2 cut(s) | 5, 1234 |
| BanI | GGYRCC | 2 cut(s) | 372, 2273 |
| BauI | CACGAG | 2 cut(s) | 612, 2314 |
| BbsI | GAAGAC | 2 cut(s) | 2187, 2500 |
| Bbv12I | GWGCWC | 2 cut(s) | 1578, 2635 |
| BbvI | GCAGC | 5 cut(s) | 187, 209, 485, 1225, 2593 |
| BccI | CCATC | 8 cut(s) | 367, 444, 658, 1409, 1840, 2137, 2189, 2285 |
| BceAI | ACGGC | 1 cut(s) | 520 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 91, 125, 2263, 2297 |
| BciT130I | CCWGG | 1 cut(s) | 978 |
| BciVI | GTATCC | 2 cut(s) | 88, 603 |
| BcnI | CCSGG | 4 cut(s) | 1410, 1539, 2271, 2599 |
| BcoDI | GTCTC | 1 cut(s) | 615 |
| BfaI | CTAG | 6 cut(s) | 36, 563, 788, 2004, 2352, 2573 |
| BfmI | CTRYAG | 2 cut(s) | 2168, 2297 |
| BfuI | GTATCC | 2 cut(s) | 88, 603 |
| BisI | GCNGC | 6 cut(s) | 198, 201, 474, 1239, 1311, 2582 |
| BlpI | GCTNAGC | 1 cut(s) | 405 |
| BlsI | GCNGC | 6 cut(s) | 199, 202, 475, 1240, 1312, 2583 |
| BmcAI | AGTACT | 2 cut(s) | 40, 2381 |
| Bme1390I | CCNGG | 5 cut(s) | 978, 1410, 1539, 2271, 2599 |
| Bme18I | GGWCC | 1 cut(s) | 2606 |
| BmgBI | CACGTC | 1 cut(s) | 922 |
| BmgT120I | GGNCC | 3 cut(s) | 974, 1441, 2606 |
| BmiI | GGNNCC | 4 cut(s) | 374, 830, 2275, 2607 |
| BmrFI | CCNGG | 5 cut(s) | 978, 1410, 1539, 2271, 2599 |
| BmrI | ACTGGG | 2 cut(s) | 1397, 1928 |
| BmuI | ACTGGG | 2 cut(s) | 1397, 1928 |
| BpiI | GAAGAC | 2 cut(s) | 2187, 2500 |
| BpmI | CTGGAG | 2 cut(s) | 1696, 2642 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 405 |
| BpuEI | CTTGAG | 2 cut(s) | 1681, 1826 |
| BpuMI | CCSGG | 4 cut(s) | 1410, 1539, 2271, 2599 |
| Bsa29I | ATCGAT | 1 cut(s) | 915 |
| BsaAI | YACGTR | 1 cut(s) | 1211 |
| BsaHI | GRCGYC | 2 cut(s) | 1910, 2500 |
| BsaJI | CCNNGG | 4 cut(s) | 976, 1408, 1823, 2663 |
| BsaWI | WCCGGW | 3 cut(s) | 56, 2358, 2608 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 133, 273, 1415, 1904, 1905, 2017 |
| Bse1I | ACTGG | 8 cut(s) | 52, 596, 937, 1311, 1392, 1923, 2331, 2566 |
| Bse3DI | GCAATG | 2 cut(s) | 1338, 1981 |
| BseAI | TCCGGA | 2 cut(s) | 56, 2608 |
| BseBI | CCWGG | 1 cut(s) | 978 |
| BseCI | ATCGAT | 1 cut(s) | 915 |
| BseDI | CCNNGG | 4 cut(s) | 976, 1408, 1823, 2663 |
| BseGI | GGATG | 3 cut(s) | 669, 1027, 1482 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 133, 273, 1415, 1904, 1905, 2017 |
| BseMI | GCAATG | 2 cut(s) | 1338, 1981 |
| BseMII | CTCAG | 4 cut(s) | 68, 1524, 1872, 2637 |
| BseNI | ACTGG | 8 cut(s) | 52, 596, 937, 1311, 1392, 1923, 2331, 2566 |
| BseRI | GAGGAG | 2 cut(s) | 198, 1478 |
| BseSI | GKGCMC | 3 cut(s) | 1578, 2177, 2276 |
| BseXI | GCAGC | 5 cut(s) | 187, 209, 485, 1225, 2593 |
| BseYI | CCCAGC | 1 cut(s) | 823 |
| BsgI | GTGCAG | 1 cut(s) | 1224 |
| Bsh1236I | CGCG | 1 cut(s) | 1876 |
| BshFI | GGCC | 8 cut(s) | 5, 117, 975, 1173, 1234, 1310, 1401, 1442 |
| BshNI | GGYRCC | 2 cut(s) | 372, 2273 |
| BshVI | ATCGAT | 1 cut(s) | 915 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1578, 2635 |
| BsiSI | CCGG | 8 cut(s) | 57, 1410, 1538, 2270, 2359, 2437, 2599, 2609 |
| BslFI | GGGAC | 2 cut(s) | 1921, 2581 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 133, 273, 1415, 1904, 1905, 2017 |
| BsmAI | GTCTC | 1 cut(s) | 615 |
| BsmFI | GGGAC | 2 cut(s) | 1921, 2581 |
| BsmI | GAATGC | 2 cut(s) | 311, 1102 |
| BsnI | GGCC | 8 cut(s) | 5, 117, 975, 1173, 1234, 1310, 1401, 1442 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1578, 2177, 2276, 2635 |
| Bsp13I | TCCGGA | 2 cut(s) | 56, 2608 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 405 |
| BspACI | CCGC | 4 cut(s) | 507, 687, 1311, 2533 |
| BspANI | GGCC | 8 cut(s) | 5, 117, 975, 1173, 1234, 1310, 1401, 1442 |
| BspCNI | CTCAG | 4 cut(s) | 69, 1525, 1873, 2638 |
| BspDI | ATCGAT | 1 cut(s) | 915 |
| BspEI | TCCGGA | 2 cut(s) | 56, 2608 |
| BspFNI | CGCG | 1 cut(s) | 1876 |
| BspHI | TCATGA | 2 cut(s) | 1147, 1276 |
| BspLI | GGNNCC | 4 cut(s) | 374, 830, 2275, 2607 |
| BspMAI | CTGCAG | 1 cut(s) | 2172 |
| BspPI | GGATC | 5 cut(s) | 350, 414, 878, 1510, 2456 |
| BspQI | GCTCTTC | 1 cut(s) | 210 |
| BspT107I | GGYRCC | 2 cut(s) | 372, 2273 |
| BsrDI | GCAATG | 2 cut(s) | 1338, 1981 |
| BsrI | ACTGG | 8 cut(s) | 52, 596, 937, 1311, 1392, 1923, 2331, 2566 |
| BssECI | CCNNGG | 4 cut(s) | 976, 1408, 1823, 2663 |
| BssNI | GRCGYC | 2 cut(s) | 1910, 2500 |
| BssSI | CACGAG | 2 cut(s) | 612, 2314 |
| Bst2BI | CACGAG | 2 cut(s) | 612, 2314 |
| Bst2UI | CCWGG | 1 cut(s) | 978 |
| Bst4CI | ACNGT | 6 cut(s) | 372, 706, 1166, 1800, 2037, 2065 |
| Bst6I | CTCTTC | 4 cut(s) | 34, 210, 2548, 2664 |
| BstACI | GRCGYC | 2 cut(s) | 1910, 2500 |
| BstBAI | YACGTR | 1 cut(s) | 1211 |
| BstC8I | GCNNGC | 3 cut(s) | 1236, 1859, 2248 |
| BstF5I | GGATG | 3 cut(s) | 669, 1027, 1482 |
| BstFNI | CGCG | 1 cut(s) | 1876 |
| BstMAI | GTCTC | 1 cut(s) | 615 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 981, 1310, 1671, 2530, 2539, 2578 |
| BstNI | CCWGG | 1 cut(s) | 978 |
| BstNSI | RCATGY | 5 cut(s) | 644, 1347, 2250, 2267, 2375 |
| BstSCI | CCNGG | 5 cut(s) | 976, 1408, 1537, 2269, 2597 |
| BstSFI | CTRYAG | 2 cut(s) | 2168, 2297 |
| BstSLI | GKGCMC | 3 cut(s) | 1578, 2177, 2276 |
| BstSNI | TACGTA | 1 cut(s) | 1211 |
| BstUI | CGCG | 1 cut(s) | 1876 |
| BstV1I | GCAGC | 5 cut(s) | 187, 209, 485, 1225, 2593 |
| BstV2I | GAAGAC | 2 cut(s) | 2187, 2500 |
| BstX2I | RGATCY | 3 cut(s) | 355, 419, 2461 |
| BstYI | RGATCY | 3 cut(s) | 355, 419, 2461 |
| Bsu15I | ATCGAT | 1 cut(s) | 915 |
| BsuI | GTATCC | 2 cut(s) | 88, 603 |
| BsuRI | GGCC | 8 cut(s) | 5, 117, 975, 1173, 1234, 1310, 1401, 1442 |
| BsuTUI | ATCGAT | 1 cut(s) | 915 |
| BtgZI | GCGATG | 1 cut(s) | 2425 |
| BtrI | CACGTC | 1 cut(s) | 922 |
| BtsCI | GGATG | 3 cut(s) | 669, 1027, 1482 |
| BtsI | GCAGTG | 2 cut(s) | 1672, 2175 |
| BtsIMutI | CAGTG | 5 cut(s) | 1304, 1672, 1868, 1916, 2175 |
| Cac8I | GCNNGC | 3 cut(s) | 1236, 1859, 2248 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2421 |
| CciI | TCATGA | 2 cut(s) | 1147, 1276 |
| Cfr13I | GGNCC | 3 cut(s) | 974, 1441, 2606 |
| ClaI | ATCGAT | 1 cut(s) | 915 |
| CseI | GACGC | 1 cut(s) | 1882 |
| Csp6I | GTAC | 9 cut(s) | 39, 124, 368, 373, 1154, 1427, 1838, 2033, 2380 |
| CviQI | GTAC | 9 cut(s) | 39, 124, 368, 373, 1154, 1427, 1838, 2033, 2380 |
| DraI | TTTAAA | 3 cut(s) | 1354, 1950, 2052 |
| EaeI | YGGCCR | 3 cut(s) | 3, 1232, 1308 |
| Eam1104I | CTCTTC | 4 cut(s) | 34, 210, 2548, 2664 |
| EarI | CTCTTC | 4 cut(s) | 34, 210, 2548, 2664 |
| EciI | GGCGGA | 2 cut(s) | 522, 702 |
| Eco105I | TACGTA | 1 cut(s) | 1211 |
| Eco147I | AGGCCT | 1 cut(s) | 1173 |
| Eco32I | GATATC | 1 cut(s) | 2213 |
| Eco47I | GGWCC | 1 cut(s) | 2606 |
| Eco57I | CTGAAG | 2 cut(s) | 191, 2096 |
| EcoRI | GAATTC | 2 cut(s) | 1272, 2365 |
| EcoRII | CCWGG | 1 cut(s) | 976 |
| EcoRV | GATATC | 1 cut(s) | 2213 |
| EcoT22I | ATGCAT | 1 cut(s) | 1482 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 792, 824, 1317, 1349 |
| FaqI | GGGAC | 2 cut(s) | 1921, 2581 |
| FauNDI | CATATG | 1 cut(s) | 64 |
| FblI | GTMKAC | 1 cut(s) | 2022 |
| Fnu4HI | GCNGC | 6 cut(s) | 198, 201, 474, 1239, 1311, 2582 |
| FokI | GGATG | 3 cut(s) | 676, 1034, 1489 |
| Fsp4HI | GCNGC | 6 cut(s) | 198, 201, 474, 1239, 1311, 2582 |
| FspBI | CTAG | 6 cut(s) | 36, 563, 788, 2004, 2352, 2573 |
| GluI | GCNGC | 6 cut(s) | 198, 201, 474, 1239, 1311, 2582 |
| GsaI | CCCAGC | 1 cut(s) | 827 |
| GsuI | CTGGAG | 2 cut(s) | 1696, 2642 |
| HaeIII | GGCC | 8 cut(s) | 5, 117, 975, 1173, 1234, 1310, 1401, 1442 |
| HapII | CCGG | 8 cut(s) | 57, 1410, 1538, 2270, 2359, 2437, 2599, 2609 |
| HgaI | GACGC | 1 cut(s) | 1882 |
| Hin1I | GRCGYC | 2 cut(s) | 1910, 2500 |
| HindIII | AAGCTT | 2 cut(s) | 1672, 2255 |
| HpaII | CCGG | 8 cut(s) | 57, 1410, 1538, 2270, 2359, 2437, 2599, 2609 |
| HphI | GGTGA | 7 cut(s) | 101, 404, 1244, 1518, 1905, 2152, 2464 |
| Hpy166II | GTNNAC | 4 cut(s) | 319, 334, 1576, 2023 |
| Hpy8I | GTNNAC | 4 cut(s) | 319, 334, 1576, 2023 |
| Hpy99I | CGWCG | 5 cut(s) | 245, 1813, 2502, 2505, 2518 |
| HpyAV | CCTTC | 6 cut(s) | 173, 740, 1100, 1184, 1918, 2491 |
| HpyCH4III | ACNGT | 6 cut(s) | 372, 706, 1166, 1800, 2037, 2065 |
| HpyCH4IV | ACGT | 8 cut(s) | 155, 921, 1090, 1152, 1210, 1425, 1910, 2500 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 981, 1310, 1671, 2530, 2539, 2578 |
| HpySE526I | ACGT | 8 cut(s) | 155, 921, 1090, 1152, 1210, 1425, 1910, 2500 |
| Hsp92I | GRCGYC | 2 cut(s) | 1910, 2500 |
| Kpn2I | TCCGGA | 2 cut(s) | 56, 2608 |
| KpnI | GGTACC | 1 cut(s) | 376 |
| LguI | GCTCTTC | 1 cut(s) | 210 |
| LmnI | GCTCC | 1 cut(s) | 2529 |
| Lsp1109I | GCAGC | 5 cut(s) | 187, 209, 485, 1225, 2593 |
| MaeI | CTAG | 6 cut(s) | 36, 563, 788, 2004, 2352, 2573 |
| MaeII | ACGT | 8 cut(s) | 155, 921, 1090, 1152, 1210, 1425, 1910, 2500 |
| MaeIII | GTNAC | 8 cut(s) | 1200, 1250, 1524, 1911, 1981, 2059, 2329, 2354 |
| MfeI | CAATTG | 1 cut(s) | 216 |
| MflI | RGATCY | 3 cut(s) | 355, 419, 2461 |
| MhlI | GDGCHC | 4 cut(s) | 1578, 2177, 2276, 2635 |
| MlsI | TGGCCA | 2 cut(s) | 5, 1234 |
| MluNI | TGGCCA | 2 cut(s) | 5, 1234 |
| MlyI | GAGTC | 6 cut(s) | 617, 873, 1532, 2442, 2557, 2603 |
| MmeI | TCCRAC | 3 cut(s) | 520, 580, 2019 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 1234 |
| Mph1103I | ATGCAT | 1 cut(s) | 1482 |
| MroI | TCCGGA | 2 cut(s) | 56, 2608 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1329 |
| MscI | TGGCCA | 2 cut(s) | 5, 1234 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 1234 |
| MspA1I | CMGCKG | 4 cut(s) | 200, 1238, 1313, 2620 |
| MspI | CCGG | 8 cut(s) | 57, 1410, 1538, 2270, 2359, 2437, 2599, 2609 |
| MspR9I | CCNGG | 5 cut(s) | 978, 1410, 1539, 2271, 2599 |
| MunI | CAATTG | 1 cut(s) | 216 |
| Mva1269I | GAATGC | 2 cut(s) | 311, 1102 |
| MvaI | CCWGG | 1 cut(s) | 978 |
| MvnI | CGCG | 1 cut(s) | 1876 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 981, 1310, 1671, 2530, 2539, 2578 |
| NciI | CCSGG | 4 cut(s) | 1410, 1539, 2271, 2599 |
| NdeI | CATATG | 1 cut(s) | 64 |
| NlaIV | GGNNCC | 4 cut(s) | 374, 830, 2275, 2607 |
| NmuCI | GTSAC | 4 cut(s) | 1200, 1250, 1524, 1911 |
| NsiI | ATGCAT | 1 cut(s) | 1482 |
| NspI | RCATGY | 5 cut(s) | 644, 1347, 2250, 2267, 2375 |
| PaeI | GCATGC | 1 cut(s) | 2250 |
| PagI | TCATGA | 2 cut(s) | 1147, 1276 |
| PceI | AGGCCT | 1 cut(s) | 1173 |
| PciI | ACATGT | 2 cut(s) | 640, 2263 |
| PciSI | GCTCTTC | 1 cut(s) | 210 |
| PctI | GAATGC | 2 cut(s) | 311, 1102 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1329 |
| PflFI | GACNNNGTC | 1 cut(s) | 2499 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 133 |
| PkrI | GCNGC | 6 cut(s) | 199, 202, 475, 1240, 1312, 2583 |
| PleI | GAGTC | 6 cut(s) | 616, 872, 1531, 2441, 2556, 2602 |
| PpsI | GAGTC | 6 cut(s) | 616, 872, 1531, 2441, 2556, 2602 |
| Ppu21I | YACGTR | 1 cut(s) | 1211 |
| PscI | ACATGT | 2 cut(s) | 640, 2263 |
| PshBI | ATTAAT | 1 cut(s) | 2567 |
| PsiI | TTATAA | 1 cut(s) | 348 |
| Psp1406I | AACGTT | 1 cut(s) | 155 |
| Psp6I | CCWGG | 1 cut(s) | 976 |
| PspFI | CCCAGC | 1 cut(s) | 823 |
| PspGI | CCWGG | 1 cut(s) | 976 |
| PspN4I | GGNNCC | 4 cut(s) | 374, 830, 2275, 2607 |
| PspPI | GGNCC | 3 cut(s) | 974, 1441, 2606 |
| PstI | CTGCAG | 1 cut(s) | 2172 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2421 |
| PsuI | RGATCY | 3 cut(s) | 355, 419, 2461 |
| PsyI | GACNNNGTC | 1 cut(s) | 2499 |
| PvuII | CAGCTG | 3 cut(s) | 200, 1238, 2620 |
| RsaI | GTAC | 9 cut(s) | 40, 125, 369, 374, 1155, 1428, 1839, 2034, 2381 |
| RsaNI | GTAC | 9 cut(s) | 39, 124, 368, 373, 1154, 1427, 1838, 2033, 2380 |
| SapI | GCTCTTC | 1 cut(s) | 210 |
| SatI | GCNGC | 6 cut(s) | 198, 201, 474, 1239, 1311, 2582 |
| Sau96I | GGNCC | 3 cut(s) | 974, 1441, 2606 |
| ScaI | AGTACT | 2 cut(s) | 40, 2381 |
| SchI | GAGTC | 6 cut(s) | 617, 873, 1532, 2442, 2557, 2603 |
| ScrFI | CCNGG | 5 cut(s) | 978, 1410, 1539, 2271, 2599 |
| SduI | GDGCHC | 4 cut(s) | 1578, 2177, 2276, 2635 |
| SfcI | CTRYAG | 2 cut(s) | 2168, 2297 |
| SinI | GGWCC | 1 cut(s) | 2606 |
| SmlI | CTYRAG | 2 cut(s) | 1660, 1841 |
| SmoI | CTYRAG | 2 cut(s) | 1660, 1841 |
| SnaBI | TACGTA | 1 cut(s) | 1211 |
| SphI | GCATGC | 1 cut(s) | 2250 |
| SseBI | AGGCCT | 1 cut(s) | 1173 |
| SsiI | CCGC | 4 cut(s) | 507, 687, 1311, 2533 |
| SspMI | CTAG | 6 cut(s) | 36, 563, 788, 2004, 2352, 2573 |
| StuI | AGGCCT | 1 cut(s) | 1173 |
| StyD4I | CCNGG | 5 cut(s) | 976, 1408, 1537, 2269, 2597 |
| TaaI | ACNGT | 6 cut(s) | 372, 706, 1166, 1800, 2037, 2065 |
| TaiI | ACGT | 8 cut(s) | 158, 924, 1093, 1155, 1213, 1428, 1913, 2503 |
| TatI | WGTACW | 4 cut(s) | 38, 1837, 2032, 2379 |
| TauI | GCSGC | 1 cut(s) | 1313 |
| TscAI | CASTG | 5 cut(s) | 1311, 1672, 1875, 1923, 2182 |
| TseFI | GTSAC | 4 cut(s) | 1200, 1250, 1524, 1911 |
| TseI | GCWGC | 5 cut(s) | 197, 200, 473, 1238, 2581 |
| Tsp45I | GTSAC | 4 cut(s) | 1200, 1250, 1524, 1911 |
| TspGWI | ACGGA | 2 cut(s) | 449, 1797 |
| TspRI | CASTG | 5 cut(s) | 1311, 1672, 1875, 1923, 2182 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2499 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 133 |
| VneI | GTGCAC | 1 cut(s) | 1574 |
| VpaK11BI | GGWCC | 1 cut(s) | 2606 |
| VspI | ATTAAT | 1 cut(s) | 2567 |
| XapI | RAATTY | 9 cut(s) | 230, 1272, 1470, 1698, 1945, 1989, 2014, 2236, 2365 |
| XbaI | TCTAGA | 1 cut(s) | 2003 |
| XceI | RCATGY | 5 cut(s) | 644, 1347, 2250, 2267, 2375 |
| XmiI | GTMKAC | 1 cut(s) | 2022 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1329 |
| XspI | CTAG | 6 cut(s) | 36, 563, 788, 2004, 2352, 2573 |
| ZraI | GACGTC | 2 cut(s) | 1911, 2501 |
| ZrmI | AGTACT | 2 cut(s) | 40, 2381 |
| Zsp2I | ATGCAT | 1 cut(s) | 1482 |