TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 504 |
| AclWI | GGATC | 4 cut(s) | 158, 232, 350, 363 |
| AcoI | YGGCCR | 2 cut(s) | 3, 335 |
| AcsI | RAATTY | 2 cut(s) | 386, 478 |
| AdeI | CACNNNGTG | 1 cut(s) | 73 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 273 |
| AgsI | TTSAA | 2 cut(s) | 221, 424 |
| AhlI | ACTAGT | 1 cut(s) | 289 |
| AluBI | AGCT | 4 cut(s) | 20, 175, 232, 461 |
| AluI | AGCT | 4 cut(s) | 20, 175, 232, 461 |
| AlwI | GGATC | 4 cut(s) | 158, 232, 350, 363 |
| Ama87I | CYCGRG | 1 cut(s) | 499 |
| AoxI | GGCC | 2 cut(s) | 3, 335 |
| ApeKI | GCWGC | 2 cut(s) | 458, 473 |
| ApoI | RAATTY | 2 cut(s) | 386, 478 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 291 |
| AspLEI | GCGC | 1 cut(s) | 417 |
| AsuHPI | GGTGA | 1 cut(s) | 404 |
| AvaI | CYCGRG | 1 cut(s) | 499 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 355 |
| BbsI | GAAGAC | 1 cut(s) | 238 |
| BbvI | GCAGC | 2 cut(s) | 470, 485 |
| BccI | CCATC | 3 cut(s) | 14, 367, 444 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 242, 276 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BcuI | ACTAGT | 1 cut(s) | 289 |
| BfaI | CTAG | 1 cut(s) | 290 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BisI | GCNGC | 3 cut(s) | 459, 474, 505 |
| BlsI | GCNGC | 3 cut(s) | 460, 475, 506 |
| BmeT110I | CYCGRG | 1 cut(s) | 499 |
| BmiI | GGNNCC | 1 cut(s) | 357 |
| BmsI | GCATC | 1 cut(s) | 272 |
| BpiI | GAAGAC | 1 cut(s) | 238 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 445, 477 |
| BsaJI | CCNNGG | 2 cut(s) | 301, 376 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 273 |
| BseDI | CCNNGG | 2 cut(s) | 301, 376 |
| BseGI | GGATG | 5 cut(s) | 6, 263, 289, 311, 433 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 273 |
| BseMII | CTCAG | 1 cut(s) | 71 |
| BseRI | GAGGAG | 1 cut(s) | 198 |
| BseXI | GCAGC | 2 cut(s) | 470, 485 |
| BshFI | GGCC | 2 cut(s) | 5, 337 |
| BsiHKCI | CYCGRG | 1 cut(s) | 499 |
| BslFI | GGGAC | 1 cut(s) | 220 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 273 |
| BsmFI | GGGAC | 1 cut(s) | 220 |
| BsnI | GGCC | 2 cut(s) | 5, 337 |
| BsoBI | CYCGRG | 1 cut(s) | 499 |
| Bsp143I | GATC | 4 cut(s) | 150, 224, 314, 355 |
| BspACI | CCGC | 1 cut(s) | 504 |
| BspANI | GGCC | 2 cut(s) | 5, 337 |
| BspCNI | CTCAG | 1 cut(s) | 72 |
| BspLI | GGNNCC | 1 cut(s) | 357 |
| BspPI | GGATC | 4 cut(s) | 158, 232, 350, 363 |
| BssECI | CCNNGG | 2 cut(s) | 301, 376 |
| BssMI | GATC | 4 cut(s) | 150, 224, 314, 355 |
| BssT1I | CCWWGG | 2 cut(s) | 301, 376 |
| Bst6I | CTCTTC | 1 cut(s) | 40 |
| BstDEI | CTNAG | 1 cut(s) | 80 |
| BstF5I | GGATG | 5 cut(s) | 6, 263, 289, 311, 433 |
| BstHHI | GCGC | 1 cut(s) | 417 |
| BstKTI | GATC | 4 cut(s) | 153, 227, 317, 358 |
| BstMBI | GATC | 4 cut(s) | 150, 224, 314, 355 |
| BstV1I | GCAGC | 2 cut(s) | 470, 485 |
| BstV2I | GAAGAC | 1 cut(s) | 238 |
| BstX2I | RGATCY | 1 cut(s) | 355 |
| BstYI | RGATCY | 1 cut(s) | 355 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 2 cut(s) | 5, 337 |
| BtsCI | GGATG | 5 cut(s) | 6, 263, 289, 311, 433 |
| CfoI | GCGC | 1 cut(s) | 417 |
| CviAII | CATG | 2 cut(s) | 410, 433 |
| CviJI | RGCY | 7 cut(s) | 5, 20, 175, 215, 232, 337, 461 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 20, 175, 215, 232, 337, 461 |
| DdeI | CTNAG | 1 cut(s) | 80 |
| DpnI | GATC | 4 cut(s) | 152, 226, 316, 357 |
| DpnII | GATC | 4 cut(s) | 150, 224, 314, 355 |
| DraIII | CACNNNGTG | 1 cut(s) | 73 |
| EaeI | YGGCCR | 2 cut(s) | 3, 335 |
| Eam1104I | CTCTTC | 1 cut(s) | 40 |
| EarI | CTCTTC | 1 cut(s) | 40 |
| Eco130I | CCWWGG | 2 cut(s) | 301, 376 |
| Eco88I | CYCGRG | 1 cut(s) | 499 |
| EcoT14I | CCWWGG | 2 cut(s) | 301, 376 |
| EcoT22I | ATGCAT | 1 cut(s) | 265 |
| ErhI | CCWWGG | 2 cut(s) | 301, 376 |
| FaeI | CATG | 2 cut(s) | 413, 436 |
| FaiI | YATR | 7 cut(s) | 61, 164, 261, 297, 411, 434, 514 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 263, 295 |
| FaqI | GGGAC | 1 cut(s) | 220 |
| FatI | CATG | 2 cut(s) | 409, 432 |
| Fnu4HI | GCNGC | 3 cut(s) | 459, 474, 505 |
| FokI | GGATG | 4 cut(s) | 250, 296, 318, 440 |
| Fsp4HI | GCNGC | 3 cut(s) | 459, 474, 505 |
| FspBI | CTAG | 1 cut(s) | 290 |
| GlaI | GCGC | 1 cut(s) | 416 |
| GluI | GCNGC | 3 cut(s) | 459, 474, 505 |
| HaeIII | GGCC | 2 cut(s) | 5, 337 |
| HhaI | GCGC | 1 cut(s) | 417 |
| Hin1II | CATG | 2 cut(s) | 413, 436 |
| Hin6I | GCGC | 1 cut(s) | 415 |
| HinP1I | GCGC | 1 cut(s) | 415 |
| HinfI | GANTC | 1 cut(s) | 420 |
| HphI | GGTGA | 1 cut(s) | 404 |
| Hpy188I | TCNGA | 5 cut(s) | 81, 212, 253, 364, 469 |
| Hpy188III | TCNNGA | 1 cut(s) | 15 |
| HpyAV | CCTTC | 2 cut(s) | 169, 215 |
| HpyCH4IV | ACGT | 1 cut(s) | 366 |
| HpyCH4V | TGCA | 3 cut(s) | 127, 263, 404 |
| HpyF3I | CTNAG | 1 cut(s) | 80 |
| HpySE526I | ACGT | 1 cut(s) | 366 |
| Hsp92II | CATG | 2 cut(s) | 413, 436 |
| HspAI | GCGC | 1 cut(s) | 415 |
| Kzo9I | GATC | 4 cut(s) | 150, 224, 314, 355 |
| LpnPI | CCDG | 5 cut(s) | 73, 102, 115, 133, 471 |
| Lsp1109I | GCAGC | 2 cut(s) | 470, 485 |
| LweI | GCATC | 1 cut(s) | 272 |
| MaeI | CTAG | 1 cut(s) | 290 |
| MaeII | ACGT | 1 cut(s) | 366 |
| MalI | GATC | 4 cut(s) | 152, 226, 316, 357 |
| MboI | GATC | 4 cut(s) | 150, 224, 314, 355 |
| MboII | GAAGA | 4 cut(s) | 15, 27, 238, 324 |
| MflI | RGATCY | 1 cut(s) | 355 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 386, 478 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 7 cut(s) | 37, 88, 176, 181, 277, 374, 388 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 265 |
| MroXI | GAANNNNTTC | 1 cut(s) | 291 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 446 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| NdeII | GATC | 4 cut(s) | 150, 224, 314, 355 |
| NlaIII | CATG | 2 cut(s) | 413, 436 |
| NlaIV | GGNNCC | 1 cut(s) | 357 |
| NsiI | ATGCAT | 1 cut(s) | 265 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 249 |
| PdmI | GAANNNNTTC | 1 cut(s) | 291 |
| PfeI | GAWTC | 1 cut(s) | 420 |
| PkrI | GCNGC | 3 cut(s) | 460, 475, 506 |
| PspN4I | GGNNCC | 1 cut(s) | 357 |
| PsuI | RGATCY | 1 cut(s) | 355 |
| SaqAI | TTAA | 1 cut(s) | 446 |
| SatI | GCNGC | 3 cut(s) | 459, 474, 505 |
| Sau3AI | GATC | 4 cut(s) | 150, 224, 314, 355 |
| SfaNI | GCATC | 1 cut(s) | 272 |
| SpeI | ACTAGT | 1 cut(s) | 289 |
| Sse9I | AATT | 2 cut(s) | 386, 478 |
| SsiI | CCGC | 1 cut(s) | 504 |
| SspMI | CTAG | 1 cut(s) | 290 |
| StyI | CCWWGG | 2 cut(s) | 301, 376 |
| TaiI | ACGT | 1 cut(s) | 369 |
| TaqI | TCGA | 1 cut(s) | 14 |
| TasI | AATT | 2 cut(s) | 386, 478 |
| TauI | GCSGC | 1 cut(s) | 507 |
| TfiI | GAWTC | 1 cut(s) | 420 |
| Tru1I | TTAA | 1 cut(s) | 446 |
| Tru9I | TTAA | 1 cut(s) | 446 |
| TseI | GCWGC | 2 cut(s) | 458, 473 |
| TspDTI | ATGAA | 5 cut(s) | 32, 48, 151, 284, 300 |
| XapI | RAATTY | 2 cut(s) | 386, 478 |
| XmnI | GAANNNNTTC | 1 cut(s) | 291 |
| XspI | CTAG | 1 cut(s) | 290 |
| Zsp2I | ATGCAT | 1 cut(s) | 265 |