TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 30 - 195 | 2.1e-52 | TIR domain |
| TIR_2 | PF13676 | 32 - 127 | 6.6e-14 | TIR domain |
| NB-ARC | PF00931 | 209 - 379 | 4.5e-22 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 450 - 518 | 2.6e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 595 - 676 | 6.7e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 599 - 668 | 7.7e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 604 |
| AccI | GTMKAC | 1 cut(s) | 1578 |
| AccII | CGCG | 5 cut(s) | 116, 124, 2031, 2127, 2137 |
| AciI | CCGC | 3 cut(s) | 116, 2137, 2301 |
| AcoI | YGGCCR | 2 cut(s) | 139, 2266 |
| AcsI | RAATTY | 3 cut(s) | 1650, 2148, 2196 |
| AcuI | CTGAAG | 2 cut(s) | 91, 920 |
| AfaI | GTAC | 3 cut(s) | 149, 1989, 2257 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1714, 2275, 2301 |
| AflII | CTTAAG | 3 cut(s) | 451, 647, 1838 |
| AgeI | ACCGGT | 1 cut(s) | 2083 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1870, 2218 |
| AhlI | ACTAGT | 1 cut(s) | 1750 |
| AjnI | CCWGG | 3 cut(s) | 338, 405, 1884 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 973, 1005 |
| Alw26I | GTCTC | 5 cut(s) | 1557, 1857, 1962, 2200, 2219 |
| AoxI | GGCC | 5 cut(s) | 139, 403, 1467, 1942, 2266 |
| ApeKI | GCWGC | 4 cut(s) | 476, 491, 494, 1744 |
| ApoI | RAATTY | 3 cut(s) | 1650, 2148, 2196 |
| AsiGI | ACCGGT | 1 cut(s) | 2083 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1356, 1539, 2073 |
| AspLEI | GCGC | 4 cut(s) | 116, 126, 2031, 2127 |
| AspS9I | GGNCC | 3 cut(s) | 403, 998, 1717 |
| AsuHPI | GGTGA | 4 cut(s) | 419, 425, 1397, 2284 |
| AvaII | GGWCC | 2 cut(s) | 998, 1717 |
| BaeGI | GKGCMC | 1 cut(s) | 1051 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1971, 2004 |
| BalI | TGGCCA | 2 cut(s) | 141, 2268 |
| BamHI | GGATCC | 1 cut(s) | 2304 |
| BanI | GGYRCC | 1 cut(s) | 604 |
| BauI | CACGAG | 2 cut(s) | 630, 2245 |
| BbsI | GAAGAC | 2 cut(s) | 645, 1527 |
| BbvCI | CCTCAGC | 1 cut(s) | 431 |
| BbvI | GCAGC | 4 cut(s) | 488, 503, 506, 1731 |
| BccI | CCATC | 6 cut(s) | 410, 501, 515, 1853, 1999, 2312 |
| BceAI | ACGGC | 1 cut(s) | 1815 |
| BciT130I | CCWGG | 3 cut(s) | 340, 407, 1886 |
| BciVI | GTATCC | 2 cut(s) | 112, 1443 |
| BcoDI | GTCTC | 5 cut(s) | 1557, 1857, 1962, 2200, 2219 |
| BcuI | ACTAGT | 1 cut(s) | 1750 |
| BfaI | CTAG | 2 cut(s) | 1751, 1902 |
| BfrI | CTTAAG | 3 cut(s) | 451, 647, 1838 |
| BfuI | GTATCC | 2 cut(s) | 112, 1443 |
| BglII | AGATCT | 2 cut(s) | 318, 1225 |
| BisI | GCNGC | 5 cut(s) | 477, 492, 495, 1745, 2138 |
| BlsI | GCNGC | 5 cut(s) | 478, 493, 496, 1746, 2139 |
| BmcAI | AGTACT | 1 cut(s) | 2257 |
| Bme1390I | CCNGG | 3 cut(s) | 340, 407, 1886 |
| Bme18I | GGWCC | 2 cut(s) | 998, 1717 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1870, 2218 |
| BmgT120I | GGNCC | 3 cut(s) | 403, 998, 1717 |
| BmiI | GGNNCC | 4 cut(s) | 19, 606, 1718, 2306 |
| BmrFI | CCNGG | 3 cut(s) | 340, 407, 1886 |
| BmsI | GCATC | 4 cut(s) | 293, 1494, 1662, 2007 |
| BpiI | GAAGAC | 2 cut(s) | 645, 1527 |
| Bpu10I | CCTNAGC | 1 cut(s) | 431 |
| BpuEI | CTTGAG | 2 cut(s) | 1633, 1732 |
| BsaJI | CCNNGG | 3 cut(s) | 13, 1663, 2308 |
| BsaWI | WCCGGW | 1 cut(s) | 2083 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 798, 828 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1714, 2275, 2301 |
| Bse118I | RCCGGY | 1 cut(s) | 2083 |
| Bse1I | ACTGG | 3 cut(s) | 142, 1945, 2219 |
| Bse3DI | GCAATG | 1 cut(s) | 1331 |
| BseBI | CCWGG | 3 cut(s) | 340, 407, 1886 |
| BseDI | CCNNGG | 3 cut(s) | 13, 1663, 2308 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1714, 2275, 2301 |
| BseMI | GCAATG | 1 cut(s) | 1331 |
| BseMII | CTCAG | 3 cut(s) | 92, 445, 1938 |
| BseNI | ACTGG | 3 cut(s) | 142, 1945, 2219 |
| BseRI | GAGGAG | 1 cut(s) | 219 |
| BseSI | GKGCMC | 1 cut(s) | 1051 |
| BseXI | GCAGC | 4 cut(s) | 488, 503, 506, 1731 |
| Bsh1236I | CGCG | 5 cut(s) | 116, 124, 2031, 2127, 2137 |
| BshFI | GGCC | 5 cut(s) | 141, 405, 1469, 1944, 2268 |
| BshNI | GGYRCC | 1 cut(s) | 604 |
| BshTI | ACCGGT | 1 cut(s) | 2083 |
| BsiSI | CCGG | 1 cut(s) | 2084 |
| BslFI | GGGAC | 1 cut(s) | 1912 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1714, 2275, 2301 |
| BsmAI | GTCTC | 5 cut(s) | 1557, 1857, 1962, 2200, 2219 |
| BsmFI | GGGAC | 1 cut(s) | 1912 |
| BsmI | GAATGC | 1 cut(s) | 2135 |
| BsnI | GGCC | 5 cut(s) | 141, 405, 1469, 1944, 2268 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1051 |
| Bsp1407I | TGTACA | 1 cut(s) | 147 |
| BspACI | CCGC | 3 cut(s) | 116, 2137, 2301 |
| BspANI | GGCC | 5 cut(s) | 141, 405, 1469, 1944, 2268 |
| BspCNI | CTCAG | 3 cut(s) | 93, 444, 1937 |
| BspFNI | CGCG | 5 cut(s) | 116, 124, 2031, 2127, 2137 |
| BspLI | GGNNCC | 4 cut(s) | 19, 606, 1718, 2306 |
| BspQI | GCTCTTC | 1 cut(s) | 1115 |
| BspT107I | GGYRCC | 1 cut(s) | 604 |
| BspTI | CTTAAG | 3 cut(s) | 451, 647, 1838 |
| BsrDI | GCAATG | 1 cut(s) | 1331 |
| BsrFI | RCCGGY | 1 cut(s) | 2083 |
| BsrGI | TGTACA | 1 cut(s) | 147 |
| BsrI | ACTGG | 3 cut(s) | 142, 1945, 2219 |
| BssAI | RCCGGY | 1 cut(s) | 2083 |
| BssECI | CCNNGG | 3 cut(s) | 13, 1663, 2308 |
| BssSI | CACGAG | 2 cut(s) | 630, 2245 |
| BssT1I | CCWWGG | 1 cut(s) | 2308 |
| Bst2BI | CACGAG | 2 cut(s) | 630, 2245 |
| Bst2UI | CCWGG | 3 cut(s) | 340, 407, 1886 |
| Bst4CI | ACNGT | 4 cut(s) | 152, 1583, 1970, 2296 |
| Bst6I | CTCTTC | 4 cut(s) | 28, 34, 1115, 2268 |
| BstAFI | CTTAAG | 3 cut(s) | 451, 647, 1838 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 281 |
| BstAUI | TGTACA | 1 cut(s) | 147 |
| BstC8I | GCNNGC | 1 cut(s) | 2135 |
| BstDEI | CTNAG | 8 cut(s) | 101, 431, 840, 911, 931, 1043, 1892, 1924 |
| BstDSI | CCRYGG | 1 cut(s) | 1663 |
| BstFNI | CGCG | 5 cut(s) | 116, 124, 2031, 2127, 2137 |
| BstHHI | GCGC | 4 cut(s) | 116, 126, 2031, 2127 |
| BstMAI | GTCTC | 5 cut(s) | 1557, 1857, 1962, 2200, 2219 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 111, 281 |
| BstNI | CCWGG | 3 cut(s) | 340, 407, 1886 |
| BstNSI | RCATGY | 2 cut(s) | 1374, 1412 |
| BstSCI | CCNGG | 3 cut(s) | 338, 405, 1884 |
| BstSLI | GKGCMC | 1 cut(s) | 1051 |
| BstUI | CGCG | 5 cut(s) | 116, 124, 2031, 2127, 2137 |
| BstV1I | GCAGC | 4 cut(s) | 488, 503, 506, 1731 |
| BstV2I | GAAGAC | 2 cut(s) | 645, 1527 |
| BstX2I | RGATCY | 7 cut(s) | 318, 376, 1225, 1816, 1888, 2023, 2304 |
| BstYI | RGATCY | 7 cut(s) | 318, 376, 1225, 1816, 1888, 2023, 2304 |
| BsuI | GTATCC | 2 cut(s) | 112, 1443 |
| BsuRI | GGCC | 5 cut(s) | 141, 405, 1469, 1944, 2268 |
| BtgI | CCRYGG | 1 cut(s) | 1663 |
| BtsIMutI | CAGTG | 2 cut(s) | 135, 1938 |
| Cac8I | GCNNGC | 1 cut(s) | 2135 |
| CfoI | GCGC | 4 cut(s) | 116, 126, 2031, 2127 |
| Cfr10I | RCCGGY | 1 cut(s) | 2083 |
| Cfr13I | GGNCC | 3 cut(s) | 403, 998, 1717 |
| Csp6I | GTAC | 3 cut(s) | 148, 1988, 2256 |
| CspAI | ACCGGT | 1 cut(s) | 2083 |
| CviQI | GTAC | 3 cut(s) | 148, 1988, 2256 |
| DdeI | CTNAG | 8 cut(s) | 101, 431, 840, 911, 931, 1043, 1892, 1924 |
| DraI | TTTAAA | 1 cut(s) | 1381 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1870, 2218 |
| EaeI | YGGCCR | 2 cut(s) | 139, 2266 |
| Eam1104I | CTCTTC | 4 cut(s) | 28, 34, 1115, 2268 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1870, 2218 |
| EarI | CTCTTC | 4 cut(s) | 28, 34, 1115, 2268 |
| Eco130I | CCWWGG | 1 cut(s) | 2308 |
| Eco147I | AGGCCT | 1 cut(s) | 1469 |
| Eco32I | GATATC | 2 cut(s) | 567, 1286 |
| Eco47I | GGWCC | 2 cut(s) | 998, 1717 |
| Eco57I | CTGAAG | 2 cut(s) | 91, 920 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1717 |
| EcoRII | CCWGG | 3 cut(s) | 338, 405, 1884 |
| EcoRV | GATATC | 2 cut(s) | 567, 1286 |
| EcoT14I | CCWWGG | 1 cut(s) | 2308 |
| EcoT22I | ATGCAT | 2 cut(s) | 286, 1509 |
| ErhI | CCWWGG | 1 cut(s) | 2308 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 284, 316, 630, 662, 1344, 1376 |
| FaqI | GGGAC | 1 cut(s) | 1912 |
| FauI | CCCGC | 1 cut(s) | 2294 |
| FblI | GTMKAC | 1 cut(s) | 1578 |
| Fnu4HI | GCNGC | 5 cut(s) | 477, 492, 495, 1745, 2138 |
| Fsp4HI | GCNGC | 5 cut(s) | 477, 492, 495, 1745, 2138 |
| FspBI | CTAG | 2 cut(s) | 1751, 1902 |
| GlaI | GCGC | 4 cut(s) | 115, 125, 2030, 2126 |
| GluI | GCNGC | 5 cut(s) | 477, 492, 495, 1745, 2138 |
| HaeIII | GGCC | 5 cut(s) | 141, 405, 1469, 1944, 2268 |
| HapII | CCGG | 1 cut(s) | 2084 |
| HhaI | GCGC | 4 cut(s) | 116, 126, 2031, 2127 |
| Hin6I | GCGC | 4 cut(s) | 114, 124, 2029, 2125 |
| HinP1I | GCGC | 4 cut(s) | 114, 124, 2029, 2125 |
| HincII | GTYRAC | 1 cut(s) | 163 |
| HindII | GTYRAC | 1 cut(s) | 163 |
| HindIII | AAGCTT | 1 cut(s) | 1098 |
| HinfI | GANTC | 9 cut(s) | 335, 626, 856, 888, 1195, 1300, 1550, 2069, 2227 |
| HpaI | GTTAAC | 1 cut(s) | 163 |
| HpaII | CCGG | 1 cut(s) | 2084 |
| HphI | GGTGA | 4 cut(s) | 419, 425, 1397, 2284 |
| Hpy166II | GTNNAC | 6 cut(s) | 84, 163, 355, 739, 949, 1579 |
| Hpy8I | GTNNAC | 6 cut(s) | 84, 163, 355, 739, 949, 1579 |
| Hpy99I | CGWCG | 2 cut(s) | 385, 1836 |
| HpyAV | CCTTC | 9 cut(s) | 190, 236, 394, 451, 466, 878, 1135, 1678, 1730 |
| HpyCH4III | ACNGT | 4 cut(s) | 152, 1583, 1970, 2296 |
| HpyCH4IV | ACGT | 2 cut(s) | 1180, 2017 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 111, 281 |
| HpyF3I | CTNAG | 8 cut(s) | 101, 431, 840, 911, 931, 1043, 1892, 1924 |
| HpySE526I | ACGT | 2 cut(s) | 1180, 2017 |
| HspAI | GCGC | 4 cut(s) | 114, 124, 2029, 2125 |
| KspAI | GTTAAC | 1 cut(s) | 163 |
| LguI | GCTCTTC | 1 cut(s) | 1115 |
| LmnI | GCTCC | 1 cut(s) | 17 |
| Lsp1109I | GCAGC | 4 cut(s) | 488, 503, 506, 1731 |
| LweI | GCATC | 4 cut(s) | 293, 1494, 1662, 2007 |
| MaeI | CTAG | 2 cut(s) | 1751, 1902 |
| MaeII | ACGT | 2 cut(s) | 1180, 2017 |
| MaeIII | GTNAC | 6 cut(s) | 868, 1322, 1385, 1424, 1914, 2047 |
| MflI | RGATCY | 7 cut(s) | 318, 376, 1225, 1816, 1888, 2023, 2304 |
| MhlI | GDGCHC | 1 cut(s) | 1051 |
| MlsI | TGGCCA | 2 cut(s) | 141, 2268 |
| MluNI | TGGCCA | 2 cut(s) | 141, 2268 |
| MlyI | GAGTC | 2 cut(s) | 1559, 2221 |
| MmeI | TCCRAC | 4 cut(s) | 363, 449, 598, 1909 |
| Mox20I | TGGCCA | 2 cut(s) | 141, 2268 |
| Mph1103I | ATGCAT | 2 cut(s) | 286, 1509 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1356, 1539, 2073 |
| MscI | TGGCCA | 2 cut(s) | 141, 2268 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1502 |
| Msp20I | TGGCCA | 2 cut(s) | 141, 2268 |
| MspCI | CTTAAG | 3 cut(s) | 451, 647, 1838 |
| MspI | CCGG | 1 cut(s) | 2084 |
| MspR9I | CCNGG | 3 cut(s) | 340, 407, 1886 |
| Mva1269I | GAATGC | 1 cut(s) | 2135 |
| MvaI | CCWGG | 3 cut(s) | 340, 407, 1886 |
| MvnI | CGCG | 5 cut(s) | 116, 124, 2031, 2127, 2137 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 111, 281 |
| NlaIV | GGNNCC | 4 cut(s) | 19, 606, 1718, 2306 |
| NmuCI | GTSAC | 3 cut(s) | 868, 1385, 1424 |
| NsiI | ATGCAT | 2 cut(s) | 286, 1509 |
| NspI | RCATGY | 2 cut(s) | 1374, 1412 |
| PceI | AGGCCT | 1 cut(s) | 1469 |
| PciSI | GCTCTTC | 1 cut(s) | 1115 |
| PctI | GAATGC | 1 cut(s) | 2135 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1356, 1539, 2073 |
| PfeI | GAWTC | 7 cut(s) | 335, 626, 856, 888, 1195, 1300, 2069 |
| PinAI | ACCGGT | 1 cut(s) | 2083 |
| PkrI | GCNGC | 5 cut(s) | 478, 493, 496, 1746, 2139 |
| PleI | GAGTC | 2 cut(s) | 1558, 2221 |
| PpsI | GAGTC | 2 cut(s) | 1558, 2221 |
| PpuMI | RGGWCCY | 1 cut(s) | 1717 |
| Psp5II | RGGWCCY | 1 cut(s) | 1717 |
| Psp6I | CCWGG | 3 cut(s) | 338, 405, 1884 |
| PspGI | CCWGG | 3 cut(s) | 338, 405, 1884 |
| PspN4I | GGNNCC | 4 cut(s) | 19, 606, 1718, 2306 |
| PspPI | GGNCC | 3 cut(s) | 403, 998, 1717 |
| PspPPI | RGGWCCY | 1 cut(s) | 1717 |
| PsuI | RGATCY | 7 cut(s) | 318, 376, 1225, 1816, 1888, 2023, 2304 |
| RsaI | GTAC | 3 cut(s) | 149, 1989, 2257 |
| RsaNI | GTAC | 3 cut(s) | 148, 1988, 2256 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1502 |
| SapI | GCTCTTC | 1 cut(s) | 1115 |
| SatI | GCNGC | 5 cut(s) | 477, 492, 495, 1745, 2138 |
| Sau96I | GGNCC | 3 cut(s) | 403, 998, 1717 |
| ScaI | AGTACT | 1 cut(s) | 2257 |
| SchI | GAGTC | 2 cut(s) | 1559, 2221 |
| ScrFI | CCNGG | 3 cut(s) | 340, 407, 1886 |
| SduI | GDGCHC | 1 cut(s) | 1051 |
| SfaNI | GCATC | 4 cut(s) | 293, 1494, 1662, 2007 |
| SinI | GGWCC | 2 cut(s) | 998, 1717 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1502 |
| SmlI | CTYRAG | 5 cut(s) | 451, 647, 1612, 1711, 1838 |
| SmoI | CTYRAG | 5 cut(s) | 451, 647, 1612, 1711, 1838 |
| SpeI | ACTAGT | 1 cut(s) | 1750 |
| SseBI | AGGCCT | 1 cut(s) | 1469 |
| SsiI | CCGC | 3 cut(s) | 116, 2137, 2301 |
| SspMI | CTAG | 2 cut(s) | 1751, 1902 |
| StuI | AGGCCT | 1 cut(s) | 1469 |
| StyD4I | CCNGG | 3 cut(s) | 338, 405, 1884 |
| StyI | CCWWGG | 1 cut(s) | 2308 |
| TaaI | ACNGT | 4 cut(s) | 152, 1583, 1970, 2296 |
| TaiI | ACGT | 2 cut(s) | 1183, 2020 |
| TaqI | TCGA | 3 cut(s) | 231, 1755, 1994 |
| TatI | WGTACW | 2 cut(s) | 147, 2255 |
| TauI | GCSGC | 1 cut(s) | 2140 |
| TfiI | GAWTC | 7 cut(s) | 335, 626, 856, 888, 1195, 1300, 2069 |
| TscAI | CASTG | 2 cut(s) | 142, 1945 |
| TseFI | GTSAC | 3 cut(s) | 868, 1385, 1424 |
| TseI | GCWGC | 4 cut(s) | 476, 491, 494, 1744 |
| Tsp45I | GTSAC | 3 cut(s) | 868, 1385, 1424 |
| TspGWI | ACGGA | 3 cut(s) | 369, 1188, 1652 |
| TspRI | CASTG | 2 cut(s) | 142, 1945 |
| Vha464I | CTTAAG | 3 cut(s) | 451, 647, 1838 |
| VpaK11BI | GGWCC | 2 cut(s) | 998, 1717 |
| XapI | RAATTY | 3 cut(s) | 1650, 2148, 2196 |
| XceI | RCATGY | 2 cut(s) | 1374, 1412 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 413, 2315 |
| XmiI | GTMKAC | 1 cut(s) | 1578 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1356, 1539, 2073 |
| XspI | CTAG | 2 cut(s) | 1751, 1902 |
| ZrmI | AGTACT | 1 cut(s) | 2257 |
| Zsp2I | ATGCAT | 2 cut(s) | 286, 1509 |