TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 195 | 2.3e-55 | TIR domain |
| TIR_2 | PF13676 | 25 - 121 | 5.9e-15 | TIR domain |
| NB-ARC | PF00931 | 209 - 378 | 6.1e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 449 - 518 | 1.8e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 705 - 783 | 3.6e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 708 - 787 | 9e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 850 - 937 | 1.8e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1727 |
| AccB1I | GGYRCC | 1 cut(s) | 2485 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 803 |
| AccI | GTMKAC | 2 cut(s) | 1553, 2667 |
| AccII | CGCG | 1 cut(s) | 2579 |
| AciI | CCGC | 3 cut(s) | 1426, 1870, 2313 |
| AclI | AACGTT | 1 cut(s) | 787 |
| AcoI | YGGCCR | 2 cut(s) | 3, 338 |
| AcuI | CTGAAG | 3 cut(s) | 495, 1093, 2418 |
| AdeI | CACNNNGTG | 1 cut(s) | 73 |
| AfaI | GTAC | 7 cut(s) | 627, 669, 1067, 1171, 1245, 1809, 3162 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 276, 803, 2036, 2386, 2604, 3516 |
| AflIII | ACRYGT | 3 cut(s) | 3163, 3202, 3299 |
| AgeI | ACCGGT | 1 cut(s) | 1240 |
| AhlI | ACTAGT | 1 cut(s) | 292 |
| AjnI | CCWGG | 4 cut(s) | 1073, 1206, 1989, 2098 |
| Alw21I | GWGCWC | 3 cut(s) | 982, 1107, 2907 |
| Alw26I | GTCTC | 1 cut(s) | 2845 |
| Alw44I | GTGCAC | 1 cut(s) | 2903 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2501 |
| Ama87I | CYCGRG | 1 cut(s) | 505 |
| AoxI | GGCC | 3 cut(s) | 3, 338, 1192 |
| ApaLI | GTGCAC | 1 cut(s) | 2903 |
| ApeKI | GCWGC | 7 cut(s) | 479, 1002, 1428, 1866, 2694, 3112, 3235 |
| AseI | ATTAAT | 1 cut(s) | 2133 |
| AsiGI | ACCGGT | 1 cut(s) | 1240 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 207, 294, 1296, 2403 |
| AspLEI | GCGC | 1 cut(s) | 2518 |
| AspS9I | GGNCC | 2 cut(s) | 955, 3336 |
| AsuC2I | CCSGG | 1 cut(s) | 1563 |
| AsuHPI | GGTGA | 4 cut(s) | 407, 1577, 2018, 3412 |
| AsuII | TTCGAA | 1 cut(s) | 2780 |
| AvaI | CYCGRG | 1 cut(s) | 505 |
| AvaII | GGWCC | 2 cut(s) | 955, 3336 |
| BaeGI | GKGCMC | 1 cut(s) | 2907 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 2 cut(s) | 358, 2039 |
| BanI | GGYRCC | 1 cut(s) | 2485 |
| BanII | GRGCYC | 2 cut(s) | 1107, 1563 |
| BauI | CACGAG | 1 cut(s) | 621 |
| BbsI | GAAGAC | 5 cut(s) | 713, 821, 1394, 2274, 3390 |
| Bbv12I | GWGCWC | 3 cut(s) | 982, 1107, 2907 |
| BbvI | GCAGC | 7 cut(s) | 491, 1014, 1440, 1878, 2681, 3099, 3222 |
| BccI | CCATC | 9 cut(s) | 370, 450, 797, 1262, 1319, 1519, 2457, 2824, 2869 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 994, 1028, 1759, 1793, 2686, 2720, 3035, 3069 |
| BciT130I | CCWGG | 4 cut(s) | 1075, 1208, 1991, 2100 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BclI | TGATCA | 1 cut(s) | 3103 |
| BcnI | CCSGG | 1 cut(s) | 1563 |
| BcoDI | GTCTC | 1 cut(s) | 2845 |
| BcuI | ACTAGT | 1 cut(s) | 292 |
| BfaI | CTAG | 8 cut(s) | 293, 809, 845, 1082, 1236, 1265, 1412, 1946 |
| BfmI | CTRYAG | 3 cut(s) | 1554, 2695, 3569 |
| BfoI | RGCGCY | 1 cut(s) | 2519 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BisI | GCNGC | 9 cut(s) | 480, 1003, 1429, 1867, 1870, 2314, 2695, 3113, 3236 |
| BlsI | GCNGC | 9 cut(s) | 481, 1004, 1430, 1868, 1871, 2315, 2696, 3114, 3237 |
| BmcAI | AGTACT | 1 cut(s) | 1171 |
| Bme1390I | CCNGG | 5 cut(s) | 1075, 1208, 1563, 1991, 2100 |
| Bme18I | GGWCC | 2 cut(s) | 955, 3336 |
| BmeT110I | CYCGRG | 1 cut(s) | 505 |
| BmgT120I | GGNCC | 2 cut(s) | 955, 3336 |
| BmiI | GGNNCC | 3 cut(s) | 360, 2041, 2487 |
| BmrFI | CCNGG | 5 cut(s) | 1075, 1208, 1563, 1991, 2100 |
| BpiI | GAAGAC | 5 cut(s) | 713, 821, 1394, 2274, 3390 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 451, 483, 1145, 1177 |
| BpmI | CTGGAG | 3 cut(s) | 2134, 2177, 2869 |
| Bpu14I | TTCGAA | 1 cut(s) | 2780 |
| BpuEI | CTTGAG | 3 cut(s) | 1173, 1702, 2224 |
| BpuMI | CCSGG | 1 cut(s) | 1563 |
| BsaAI | YACGTR | 2 cut(s) | 3164, 3300 |
| BsaBI | GATNNNNATC | 2 cut(s) | 174, 1764 |
| BsaJI | CCNNGG | 4 cut(s) | 1074, 1206, 2522, 2729 |
| BsaWI | WCCGGW | 2 cut(s) | 1240, 1804 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2842, 2872 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 276, 803, 2036, 2386, 2604, 3516 |
| Bse118I | RCCGGY | 2 cut(s) | 1240, 2739 |
| Bse1I | ACTGG | 9 cut(s) | 605, 958, 1335, 2117, 2224, 2966, 3133, 3423, 3558 |
| Bse3DI | GCAATG | 3 cut(s) | 1362, 2231, 2356 |
| Bse8I | GATNNNNATC | 2 cut(s) | 174, 1764 |
| BseBI | CCWGG | 4 cut(s) | 1075, 1208, 1991, 2100 |
| BseDI | CCNNGG | 4 cut(s) | 1074, 1206, 2522, 2729 |
| BseGI | GGATG | 8 cut(s) | 266, 292, 1600, 1940, 2198, 2240, 2594, 2893 |
| BseJI | GATNNNNATC | 2 cut(s) | 174, 1764 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 276, 803, 2036, 2386, 2604, 3516 |
| BseMI | GCAATG | 3 cut(s) | 1362, 2231, 2356 |
| BseMII | CTCAG | 5 cut(s) | 71, 828, 1176, 2951, 3495 |
| BseNI | ACTGG | 9 cut(s) | 605, 958, 1335, 2117, 2224, 2966, 3133, 3423, 3558 |
| BseRI | GAGGAG | 1 cut(s) | 201 |
| BseSI | GKGCMC | 1 cut(s) | 2907 |
| BseXI | GCAGC | 7 cut(s) | 491, 1014, 1440, 1878, 2681, 3099, 3222 |
| BsgI | GTGCAG | 5 cut(s) | 1619, 2131, 2490, 3221, 3429 |
| Bsh1236I | CGCG | 1 cut(s) | 2579 |
| BshFI | GGCC | 3 cut(s) | 5, 340, 1194 |
| BshNI | GGYRCC | 1 cut(s) | 2485 |
| BshTI | ACCGGT | 1 cut(s) | 1240 |
| BsiHKAI | GWGCWC | 3 cut(s) | 982, 1107, 2907 |
| BsiHKCI | CYCGRG | 1 cut(s) | 505 |
| BsiSI | CCGG | 5 cut(s) | 975, 1241, 1563, 1805, 2740 |
| BslFI | GGGAC | 4 cut(s) | 2566, 3083, 3492, 3509 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 276, 803, 2036, 2386, 2604, 3516 |
| BsmAI | GTCTC | 1 cut(s) | 2845 |
| BsmFI | GGGAC | 4 cut(s) | 2566, 3083, 3492, 3509 |
| BsmI | GAATGC | 2 cut(s) | 1296, 2654 |
| BsnI | GGCC | 3 cut(s) | 5, 340, 1194 |
| BsoBI | CYCGRG | 1 cut(s) | 505 |
| Bsp119I | TTCGAA | 1 cut(s) | 2780 |
| Bsp1286I | GDGCHC | 4 cut(s) | 982, 1107, 1563, 2907 |
| Bsp1407I | TGTACA | 2 cut(s) | 625, 1065 |
| BspACI | CCGC | 3 cut(s) | 1426, 1870, 2313 |
| BspANI | GGCC | 3 cut(s) | 5, 340, 1194 |
| BspCNI | CTCAG | 5 cut(s) | 72, 829, 1175, 2950, 3494 |
| BspFNI | CGCG | 1 cut(s) | 2579 |
| BspLI | GGNNCC | 3 cut(s) | 360, 2041, 2487 |
| BspMAI | CTGCAG | 1 cut(s) | 2699 |
| BspQI | GCTCTTC | 1 cut(s) | 1112 |
| BspT104I | TTCGAA | 1 cut(s) | 2780 |
| BspT107I | GGYRCC | 1 cut(s) | 2485 |
| BsrDI | GCAATG | 3 cut(s) | 1362, 2231, 2356 |
| BsrFI | RCCGGY | 2 cut(s) | 1240, 2739 |
| BsrGI | TGTACA | 2 cut(s) | 625, 1065 |
| BsrI | ACTGG | 9 cut(s) | 605, 958, 1335, 2117, 2224, 2966, 3133, 3423, 3558 |
| BssAI | RCCGGY | 2 cut(s) | 1240, 2739 |
| BssECI | CCNNGG | 4 cut(s) | 1074, 1206, 2522, 2729 |
| BssSI | CACGAG | 1 cut(s) | 621 |
| BssT1I | CCWWGG | 2 cut(s) | 2522, 2729 |
| Bst2BI | CACGAG | 1 cut(s) | 621 |
| Bst2UI | CCWGG | 4 cut(s) | 1075, 1208, 1991, 2100 |
| Bst4CI | ACNGT | 6 cut(s) | 827, 1045, 1174, 1743, 2438, 3030 |
| Bst6I | CTCTTC | 2 cut(s) | 1112, 2921 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1261, 1513 |
| BstAUI | TGTACA | 2 cut(s) | 625, 1065 |
| BstBAI | YACGTR | 2 cut(s) | 3164, 3300 |
| BstBI | TTCGAA | 1 cut(s) | 2780 |
| BstC8I | GCNNGC | 6 cut(s) | 512, 1257, 1505, 2469, 2473, 2907 |
| BstDEI | CTNAG | 8 cut(s) | 80, 646, 837, 1162, 1981, 1997, 2937, 3481 |
| BstF5I | GGATG | 8 cut(s) | 266, 292, 1600, 1940, 2198, 2240, 2594, 2893 |
| BstFNI | CGCG | 1 cut(s) | 2579 |
| BstH2I | RGCGCY | 1 cut(s) | 2519 |
| BstHHI | GCGC | 1 cut(s) | 2518 |
| BstMAI | GTCTC | 1 cut(s) | 2845 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1261, 1513, 1567, 2524, 3286 |
| BstNI | CCWGG | 4 cut(s) | 1075, 1208, 1991, 2100 |
| BstNSI | RCATGY | 2 cut(s) | 637, 1507 |
| BstSCI | CCNGG | 5 cut(s) | 1073, 1206, 1561, 1989, 2098 |
| BstSFI | CTRYAG | 3 cut(s) | 1554, 2695, 3569 |
| BstSLI | GKGCMC | 1 cut(s) | 2907 |
| BstUI | CGCG | 1 cut(s) | 2579 |
| BstV1I | GCAGC | 7 cut(s) | 491, 1014, 1440, 1878, 2681, 3099, 3222 |
| BstV2I | GAAGAC | 5 cut(s) | 713, 821, 1394, 2274, 3390 |
| BstX2I | RGATCY | 4 cut(s) | 358, 1840, 1993, 2039 |
| BstYI | RGATCY | 4 cut(s) | 358, 1840, 1993, 2039 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 3 cut(s) | 5, 340, 1194 |
| BtgZI | GCGATG | 1 cut(s) | 2524 |
| BtsCI | GGATG | 8 cut(s) | 266, 292, 1600, 1940, 2198, 2240, 2594, 2893 |
| BtsI | GCAGTG | 1 cut(s) | 697 |
| BtsIMutI | CAGTG | 5 cut(s) | 697, 798, 2217, 2499, 3430 |
| Cac8I | GCNNGC | 6 cut(s) | 512, 1257, 1505, 2469, 2473, 2907 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2501 |
| CfoI | GCGC | 1 cut(s) | 2518 |
| Cfr10I | RCCGGY | 2 cut(s) | 1240, 2739 |
| Cfr13I | GGNCC | 2 cut(s) | 955, 3336 |
| CseI | GACGC | 3 cut(s) | 887, 2568, 3269 |
| Csp6I | GTAC | 7 cut(s) | 626, 668, 1066, 1170, 1244, 1808, 3161 |
| CspAI | ACCGGT | 1 cut(s) | 1240 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2370, 2405 |
| CviQI | GTAC | 7 cut(s) | 626, 668, 1066, 1170, 1244, 1808, 3161 |
| DdeI | CTNAG | 8 cut(s) | 80, 646, 837, 1162, 1981, 1997, 2937, 3481 |
| DraI | TTTAAA | 3 cut(s) | 1276, 2016, 3469 |
| DraIII | CACNNNGTG | 1 cut(s) | 73 |
| EaeI | YGGCCR | 2 cut(s) | 3, 338 |
| Eam1104I | CTCTTC | 2 cut(s) | 1112, 2921 |
| EarI | CTCTTC | 2 cut(s) | 1112, 2921 |
| Ecl136II | GAGCTC | 1 cut(s) | 1105 |
| Eco130I | CCWWGG | 2 cut(s) | 2522, 2729 |
| Eco147I | AGGCCT | 1 cut(s) | 1194 |
| Eco24I | GRGCYC | 2 cut(s) | 1107, 1563 |
| Eco32I | GATATC | 1 cut(s) | 2252 |
| Eco47I | GGWCC | 2 cut(s) | 955, 3336 |
| Eco53kI | GAGCTC | 1 cut(s) | 1105 |
| Eco57I | CTGAAG | 3 cut(s) | 495, 1093, 2418 |
| Eco88I | CYCGRG | 1 cut(s) | 505 |
| EcoICRI | GAGCTC | 1 cut(s) | 1105 |
| EcoRI | GAATTC | 1 cut(s) | 2504 |
| EcoRII | CCWGG | 4 cut(s) | 1073, 1206, 1989, 2098 |
| EcoRV | GATATC | 1 cut(s) | 2252 |
| EcoT14I | CCWWGG | 2 cut(s) | 2522, 2729 |
| EcoT22I | ATGCAT | 3 cut(s) | 268, 1509, 2654 |
| EcoT38I | GRGCYC | 2 cut(s) | 1107, 1563 |
| ErhI | CCWWGG | 2 cut(s) | 2522, 2729 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 621, 653, 2324, 2356 |
| FaqI | GGGAC | 4 cut(s) | 2566, 3083, 3492, 3509 |
| FbaI | TGATCA | 1 cut(s) | 3103 |
| FblI | GTMKAC | 2 cut(s) | 1553, 2667 |
| Fnu4HI | GCNGC | 9 cut(s) | 480, 1003, 1429, 1867, 1870, 2314, 2695, 3113, 3236 |
| FokI | GGATG | 8 cut(s) | 253, 299, 1607, 1947, 2185, 2227, 2581, 2900 |
| FriOI | GRGCYC | 2 cut(s) | 1107, 1563 |
| Fsp4HI | GCNGC | 9 cut(s) | 480, 1003, 1429, 1867, 1870, 2314, 2695, 3113, 3236 |
| FspBI | CTAG | 8 cut(s) | 293, 809, 845, 1082, 1236, 1265, 1412, 1946 |
| GlaI | GCGC | 1 cut(s) | 2517 |
| GluI | GCNGC | 9 cut(s) | 480, 1003, 1429, 1867, 1870, 2314, 2695, 3113, 3236 |
| GsuI | CTGGAG | 3 cut(s) | 2134, 2177, 2869 |
| HaeII | RGCGCY | 1 cut(s) | 2519 |
| HaeIII | GGCC | 3 cut(s) | 5, 340, 1194 |
| HapII | CCGG | 5 cut(s) | 975, 1241, 1563, 1805, 2740 |
| HgaI | GACGC | 3 cut(s) | 887, 2568, 3269 |
| HhaI | GCGC | 1 cut(s) | 2518 |
| Hin6I | GCGC | 1 cut(s) | 2516 |
| HinP1I | GCGC | 1 cut(s) | 2516 |
| HincII | GTYRAC | 5 cut(s) | 814, 1041, 2059, 2110, 2668 |
| HindII | GTYRAC | 5 cut(s) | 814, 1041, 2059, 2110, 2668 |
| HindIII | AAGCTT | 1 cut(s) | 2051 |
| HpaII | CCGG | 5 cut(s) | 975, 1241, 1563, 1805, 2740 |
| HphI | GGTGA | 4 cut(s) | 407, 1577, 2018, 3412 |
| HpyCH4III | ACNGT | 6 cut(s) | 827, 1045, 1174, 1743, 2438, 3030 |
| HpyCH4IV | ACGT | 9 cut(s) | 369, 787, 1731, 1879, 3137, 3163, 3202, 3299, 3387 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1261, 1513, 1567, 2524, 3286 |
| HpyF3I | CTNAG | 8 cut(s) | 80, 646, 837, 1162, 1981, 1997, 2937, 3481 |
| HpySE526I | ACGT | 9 cut(s) | 369, 787, 1731, 1879, 3137, 3163, 3202, 3299, 3387 |
| HspAI | GCGC | 1 cut(s) | 2516 |
| Ksp22I | TGATCA | 1 cut(s) | 3103 |
| LguI | GCTCTTC | 1 cut(s) | 1112 |
| LmnI | GCTCC | 2 cut(s) | 977, 2800 |
| Lsp1109I | GCAGC | 7 cut(s) | 491, 1014, 1440, 1878, 2681, 3099, 3222 |
| MaeI | CTAG | 8 cut(s) | 293, 809, 845, 1082, 1236, 1265, 1412, 1946 |
| MaeII | ACGT | 9 cut(s) | 369, 787, 1731, 1879, 3137, 3163, 3202, 3299, 3387 |
| MaeIII | GTNAC | 4 cut(s) | 1015, 1421, 1796, 2438 |
| MfeI | CAATTG | 4 cut(s) | 11, 714, 738, 1116 |
| MflI | RGATCY | 4 cut(s) | 358, 1840, 1993, 2039 |
| MhlI | GDGCHC | 4 cut(s) | 982, 1107, 1563, 2907 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 9 cut(s) | 1559, 1693, 2402, 2435, 2847, 2919, 3227, 3315, 3473 |
| MmeI | TCCRAC | 5 cut(s) | 1364, 2017, 2238, 2432, 3201 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 3 cut(s) | 268, 1509, 2654 |
| MroXI | GAANNNNTTC | 4 cut(s) | 207, 294, 1296, 2403 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 5 cut(s) | 519, 1230, 1593, 2548, 3153 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 3000 |
| MspI | CCGG | 5 cut(s) | 975, 1241, 1563, 1805, 2740 |
| MspR9I | CCNGG | 5 cut(s) | 1075, 1208, 1563, 1991, 2100 |
| MunI | CAATTG | 4 cut(s) | 11, 714, 738, 1116 |
| Mva1269I | GAATGC | 2 cut(s) | 1296, 2654 |
| MvaI | CCWGG | 4 cut(s) | 1075, 1208, 1991, 2100 |
| MvnI | CGCG | 1 cut(s) | 2579 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1261, 1513, 1567, 2524, 3286 |
| NciI | CCSGG | 1 cut(s) | 1563 |
| NlaIV | GGNNCC | 3 cut(s) | 360, 2041, 2487 |
| NmuCI | GTSAC | 3 cut(s) | 1015, 1421, 2438 |
| NsiI | ATGCAT | 3 cut(s) | 268, 1509, 2654 |
| NspI | RCATGY | 2 cut(s) | 637, 1507 |
| NspV | TTCGAA | 1 cut(s) | 2780 |
| PaeI | GCATGC | 1 cut(s) | 1507 |
| PceI | AGGCCT | 1 cut(s) | 1194 |
| PciSI | GCTCTTC | 1 cut(s) | 1112 |
| PctI | GAATGC | 2 cut(s) | 1296, 2654 |
| PdmI | GAANNNNTTC | 4 cut(s) | 207, 294, 1296, 2403 |
| PflFI | GACNNNGTC | 1 cut(s) | 2856 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 803 |
| PfoI | TCCNGGA | 1 cut(s) | 1989 |
| PinAI | ACCGGT | 1 cut(s) | 1240 |
| PkrI | GCNGC | 9 cut(s) | 481, 1004, 1430, 1868, 1871, 2315, 2696, 3114, 3237 |
| PleI | GAGTC | 9 cut(s) | 1558, 1692, 2401, 2435, 2847, 2919, 3226, 3314, 3473 |
| PpsI | GAGTC | 9 cut(s) | 1558, 1692, 2401, 2435, 2847, 2919, 3226, 3314, 3473 |
| Ppu21I | YACGTR | 2 cut(s) | 3164, 3300 |
| PshBI | ATTAAT | 1 cut(s) | 2133 |
| PsiI | TTATAA | 1 cut(s) | 1727 |
| Psp124BI | GAGCTC | 1 cut(s) | 1107 |
| Psp1406I | AACGTT | 1 cut(s) | 787 |
| Psp6I | CCWGG | 4 cut(s) | 1073, 1206, 1989, 2098 |
| PspGI | CCWGG | 4 cut(s) | 1073, 1206, 1989, 2098 |
| PspN4I | GGNNCC | 3 cut(s) | 360, 2041, 2487 |
| PspPI | GGNCC | 2 cut(s) | 955, 3336 |
| PstI | CTGCAG | 1 cut(s) | 2699 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2501 |
| PsuI | RGATCY | 4 cut(s) | 358, 1840, 1993, 2039 |
| PsyI | GACNNNGTC | 1 cut(s) | 2856 |
| PvuII | CAGCTG | 1 cut(s) | 3000 |
| RsaI | GTAC | 7 cut(s) | 627, 669, 1067, 1171, 1245, 1809, 3162 |
| RsaNI | GTAC | 7 cut(s) | 626, 668, 1066, 1170, 1244, 1808, 3161 |
| RseI | CAYNNNNRTG | 5 cut(s) | 519, 1230, 1593, 2548, 3153 |
| SacI | GAGCTC | 1 cut(s) | 1107 |
| SalI | GTCGAC | 1 cut(s) | 2666 |
| SapI | GCTCTTC | 1 cut(s) | 1112 |
| SatI | GCNGC | 9 cut(s) | 480, 1003, 1429, 1867, 1870, 2314, 2695, 3113, 3236 |
| Sau96I | GGNCC | 2 cut(s) | 955, 3336 |
| ScaI | AGTACT | 1 cut(s) | 1171 |
| SchI | GAGTC | 9 cut(s) | 1559, 1693, 2402, 2435, 2847, 2919, 3227, 3315, 3473 |
| ScrFI | CCNGG | 5 cut(s) | 1075, 1208, 1563, 1991, 2100 |
| SduI | GDGCHC | 4 cut(s) | 982, 1107, 1563, 2907 |
| SfcI | CTRYAG | 3 cut(s) | 1554, 2695, 3569 |
| SfuI | TTCGAA | 1 cut(s) | 2780 |
| SinI | GGWCC | 2 cut(s) | 955, 3336 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 519, 1230, 1593, 2548, 3153 |
| SmlI | CTYRAG | 3 cut(s) | 1188, 1681, 2203 |
| SmoI | CTYRAG | 3 cut(s) | 1188, 1681, 2203 |
| SpeI | ACTAGT | 1 cut(s) | 292 |
| SphI | GCATGC | 1 cut(s) | 1507 |
| SseBI | AGGCCT | 1 cut(s) | 1194 |
| SsiI | CCGC | 3 cut(s) | 1426, 1870, 2313 |
| SspI | AATATT | 1 cut(s) | 2566 |
| SspMI | CTAG | 8 cut(s) | 293, 809, 845, 1082, 1236, 1265, 1412, 1946 |
| SstI | GAGCTC | 1 cut(s) | 1107 |
| StuI | AGGCCT | 1 cut(s) | 1194 |
| StyD4I | CCNGG | 5 cut(s) | 1073, 1206, 1561, 1989, 2098 |
| StyI | CCWWGG | 2 cut(s) | 2522, 2729 |
| TaaI | ACNGT | 6 cut(s) | 827, 1045, 1174, 1743, 2438, 3030 |
| TaiI | ACGT | 9 cut(s) | 372, 790, 1734, 1882, 3140, 3166, 3205, 3302, 3390 |
| TaqI | TCGA | 8 cut(s) | 1290, 1359, 2450, 2667, 2780, 2923, 3045, 3304 |
| TaqII | GACCGA | 1 cut(s) | 3324 |
| TatI | WGTACW | 3 cut(s) | 625, 1065, 1169 |
| TauI | GCSGC | 2 cut(s) | 1872, 2316 |
| TscAI | CASTG | 5 cut(s) | 697, 798, 2224, 2506, 3430 |
| TseFI | GTSAC | 3 cut(s) | 1015, 1421, 2438 |
| TseI | GCWGC | 7 cut(s) | 479, 1002, 1428, 1866, 2694, 3112, 3235 |
| Tsp45I | GTSAC | 3 cut(s) | 1015, 1421, 2438 |
| TspGWI | ACGGA | 3 cut(s) | 1188, 3273, 3395 |
| TspRI | CASTG | 5 cut(s) | 697, 798, 2224, 2506, 3430 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2856 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 803 |
| VneI | GTGCAC | 1 cut(s) | 2903 |
| VpaK11BI | GGWCC | 2 cut(s) | 955, 3336 |
| VspI | ATTAAT | 1 cut(s) | 2133 |
| XceI | RCATGY | 2 cut(s) | 637, 1507 |
| XmiI | GTMKAC | 2 cut(s) | 1553, 2667 |
| XmnI | GAANNNNTTC | 4 cut(s) | 207, 294, 1296, 2403 |
| XspI | CTAG | 8 cut(s) | 293, 809, 845, 1082, 1236, 1265, 1412, 1946 |
| ZrmI | AGTACT | 1 cut(s) | 1171 |
| Zsp2I | ATGCAT | 3 cut(s) | 268, 1509, 2654 |