TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 277, 335 |
| AcoI | YGGCCR | 1 cut(s) | 320 |
| AcuI | CTGAAG | 3 cut(s) | 33, 149, 258 |
| AfeI | AGCGCT | 1 cut(s) | 189 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 258 |
| AgsI | TTSAA | 1 cut(s) | 222 |
| AluBI | AGCT | 2 cut(s) | 119, 160 |
| AluI | AGCT | 2 cut(s) | 119, 160 |
| Alw21I | GWGCWC | 1 cut(s) | 162 |
| AlwI | GGATC | 2 cut(s) | 277, 335 |
| Aor51HI | AGCGCT | 1 cut(s) | 189 |
| AoxI | GGCC | 2 cut(s) | 103, 320 |
| AspLEI | GCGC | 1 cut(s) | 190 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| BalI | TGGCCA | 1 cut(s) | 322 |
| BanII | GRGCYC | 1 cut(s) | 162 |
| BbsI | GAAGAC | 1 cut(s) | 246 |
| Bbv12I | GWGCWC | 1 cut(s) | 162 |
| BccI | CCATC | 2 cut(s) | 114, 352 |
| BceAI | ACGGC | 1 cut(s) | 24 |
| BfoI | RGCGCY | 1 cut(s) | 191 |
| BmsI | GCATC | 1 cut(s) | 257 |
| BpiI | GAAGAC | 1 cut(s) | 246 |
| BsaBI | GATNNNNATC | 1 cut(s) | 221 |
| BsaJI | CCNNGG | 1 cut(s) | 44 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 258 |
| Bse1I | ACTGG | 1 cut(s) | 323 |
| Bse8I | GATNNNNATC | 1 cut(s) | 221 |
| BseDI | CCNNGG | 1 cut(s) | 44 |
| BseGI | GGATG | 3 cut(s) | 157, 248, 274 |
| BseJI | GATNNNNATC | 1 cut(s) | 221 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 258 |
| BseNI | ACTGG | 1 cut(s) | 323 |
| BseRI | GAGGAG | 2 cut(s) | 15, 183 |
| BsgI | GTGCAG | 1 cut(s) | 133 |
| BshFI | GGCC | 2 cut(s) | 105, 322 |
| BsiHKAI | GWGCWC | 1 cut(s) | 162 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 258 |
| BsnI | GGCC | 2 cut(s) | 105, 322 |
| Bsp1286I | GDGCHC | 1 cut(s) | 162 |
| Bsp143I | GATC | 3 cut(s) | 6, 282, 340 |
| Bsp19I | CCATGG | 1 cut(s) | 44 |
| BspANI | GGCC | 2 cut(s) | 105, 322 |
| BspPI | GGATC | 2 cut(s) | 277, 335 |
| BsrI | ACTGG | 1 cut(s) | 323 |
| BssECI | CCNNGG | 1 cut(s) | 44 |
| BssMI | GATC | 3 cut(s) | 6, 282, 340 |
| BssT1I | CCWWGG | 1 cut(s) | 44 |
| Bst4CI | ACNGT | 2 cut(s) | 56, 316 |
| Bst6I | CTCTTC | 2 cut(s) | 168, 201 |
| BstDSI | CCRYGG | 1 cut(s) | 44 |
| BstF5I | GGATG | 3 cut(s) | 157, 248, 274 |
| BstH2I | RGCGCY | 1 cut(s) | 191 |
| BstHHI | GCGC | 1 cut(s) | 190 |
| BstKTI | GATC | 3 cut(s) | 9, 285, 343 |
| BstMBI | GATC | 3 cut(s) | 6, 282, 340 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 111 |
| BstV2I | GAAGAC | 1 cut(s) | 246 |
| BstX2I | RGATCY | 1 cut(s) | 282 |
| BstYI | RGATCY | 1 cut(s) | 282 |
| BsuRI | GGCC | 2 cut(s) | 105, 322 |
| BtgI | CCRYGG | 1 cut(s) | 44 |
| BtsCI | GGATG | 3 cut(s) | 157, 248, 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 9 |
| CfoI | GCGC | 1 cut(s) | 190 |
| CseI | GACGC | 1 cut(s) | 113 |
| CviAII | CATG | 2 cut(s) | 45, 148 |
| CviJI | RGCY | 6 cut(s) | 20, 39, 105, 119, 160, 322 |
| CviKI_1 | RGCY | 6 cut(s) | 20, 39, 105, 119, 160, 322 |
| DpnI | GATC | 3 cut(s) | 8, 284, 342 |
| DpnII | GATC | 3 cut(s) | 6, 282, 340 |
| EaeI | YGGCCR | 1 cut(s) | 320 |
| Eam1104I | CTCTTC | 2 cut(s) | 168, 201 |
| EarI | CTCTTC | 2 cut(s) | 168, 201 |
| Ecl136II | GAGCTC | 1 cut(s) | 160 |
| Eco130I | CCWWGG | 1 cut(s) | 44 |
| Eco24I | GRGCYC | 1 cut(s) | 162 |
| Eco32I | GATATC | 1 cut(s) | 180 |
| Eco47III | AGCGCT | 1 cut(s) | 189 |
| Eco53kI | GAGCTC | 1 cut(s) | 160 |
| Eco57I | CTGAAG | 3 cut(s) | 33, 149, 258 |
| EcoICRI | GAGCTC | 1 cut(s) | 160 |
| EcoRV | GATATC | 1 cut(s) | 180 |
| EcoT14I | CCWWGG | 1 cut(s) | 44 |
| EcoT22I | ATGCAT | 1 cut(s) | 250 |
| EcoT38I | GRGCYC | 1 cut(s) | 162 |
| ErhI | CCWWGG | 1 cut(s) | 44 |
| FaeI | CATG | 2 cut(s) | 48, 151 |
| FaiI | YATR | 6 cut(s) | 46, 149, 246, 304, 306, 355 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 248, 280 |
| FatI | CATG | 2 cut(s) | 44, 147 |
| FauNDI | CATATG | 1 cut(s) | 304 |
| FokI | GGATG | 3 cut(s) | 164, 235, 281 |
| FriOI | GRGCYC | 1 cut(s) | 162 |
| GlaI | GCGC | 1 cut(s) | 189 |
| HaeII | RGCGCY | 1 cut(s) | 191 |
| HaeIII | GGCC | 2 cut(s) | 105, 322 |
| HgaI | GACGC | 1 cut(s) | 113 |
| HhaI | GCGC | 1 cut(s) | 190 |
| Hin1II | CATG | 2 cut(s) | 48, 151 |
| Hin6I | GCGC | 1 cut(s) | 188 |
| HinP1I | GCGC | 1 cut(s) | 188 |
| HinfI | GANTC | 1 cut(s) | 209 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy188I | TCNGA | 3 cut(s) | 129, 238, 349 |
| Hpy188III | TCNNGA | 1 cut(s) | 280 |
| HpyAV | CCTTC | 3 cut(s) | 39, 124, 154 |
| HpyCH4III | ACNGT | 2 cut(s) | 56, 316 |
| HpyCH4V | TGCA | 3 cut(s) | 114, 248, 294 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 111 |
| Hsp92II | CATG | 2 cut(s) | 48, 151 |
| HspAI | GCGC | 1 cut(s) | 188 |
| Kzo9I | GATC | 3 cut(s) | 6, 282, 340 |
| LpnPI | CCDG | 3 cut(s) | 49, 87, 336 |
| LweI | GCATC | 1 cut(s) | 257 |
| MalI | GATC | 3 cut(s) | 8, 284, 342 |
| MboI | GATC | 3 cut(s) | 6, 282, 340 |
| MboII | GAAGA | 7 cut(s) | 24, 26, 92, 185, 218, 226, 251 |
| MflI | RGATCY | 1 cut(s) | 282 |
| MhlI | GDGCHC | 1 cut(s) | 162 |
| MlsI | TGGCCA | 1 cut(s) | 322 |
| MluCI | AATT | 1 cut(s) | 94 |
| MluNI | TGGCCA | 1 cut(s) | 322 |
| MlyI | GAGTC | 1 cut(s) | 218 |
| MnlI | CCTC | 5 cut(s) | 36, 68, 161, 262, 296 |
| Mox20I | TGGCCA | 1 cut(s) | 322 |
| Mph1103I | ATGCAT | 1 cut(s) | 250 |
| MscI | TGGCCA | 1 cut(s) | 322 |
| MslI | CAYNNNNRTG | 1 cut(s) | 146 |
| Msp20I | TGGCCA | 1 cut(s) | 322 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 111 |
| NcoI | CCATGG | 1 cut(s) | 44 |
| NdeI | CATATG | 1 cut(s) | 304 |
| NdeII | GATC | 3 cut(s) | 6, 282, 340 |
| NlaIII | CATG | 2 cut(s) | 48, 151 |
| NsiI | ATGCAT | 1 cut(s) | 250 |
| PleI | GAGTC | 1 cut(s) | 217 |
| PpsI | GAGTC | 1 cut(s) | 217 |
| Psp124BI | GAGCTC | 1 cut(s) | 162 |
| PsuI | RGATCY | 1 cut(s) | 282 |
| RseI | CAYNNNNRTG | 1 cut(s) | 146 |
| SacI | GAGCTC | 1 cut(s) | 162 |
| Sau3AI | GATC | 3 cut(s) | 6, 282, 340 |
| SchI | GAGTC | 1 cut(s) | 218 |
| SduI | GDGCHC | 1 cut(s) | 162 |
| SetI | ASST | 4 cut(s) | 79, 121, 146, 162 |
| SfaNI | GCATC | 1 cut(s) | 257 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 146 |
| Sse9I | AATT | 1 cut(s) | 94 |
| SstI | GAGCTC | 1 cut(s) | 162 |
| StyI | CCWWGG | 1 cut(s) | 44 |
| TaaI | ACNGT | 2 cut(s) | 56, 316 |
| TaqI | TCGA | 4 cut(s) | 204, 212, 288, 339 |
| TasI | AATT | 1 cut(s) | 94 |
| TscAI | CASTG | 1 cut(s) | 16 |
| TspDTI | ATGAA | 3 cut(s) | 136, 285, 321 |
| TspRI | CASTG | 1 cut(s) | 16 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 262 |
| Zsp2I | ATGCAT | 1 cut(s) | 250 |