TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 212 - 421 | 2.7e-28 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 227 |
| Acc36I | ACCTGC | 1 cut(s) | 884 |
| AccIII | TCCGGA | 1 cut(s) | 1072 |
| AclWI | GGATC | 2 cut(s) | 633, 646 |
| AcuI | CTGAAG | 1 cut(s) | 903 |
| AfaI | GTAC | 3 cut(s) | 101, 509, 883 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 648 |
| AflII | CTTAAG | 1 cut(s) | 608 |
| AflIII | ACRYGT | 1 cut(s) | 253 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AluBI | AGCT | 2 cut(s) | 433, 964 |
| AluI | AGCT | 2 cut(s) | 433, 964 |
| AlwI | GGATC | 2 cut(s) | 633, 646 |
| Ama87I | CYCGRG | 2 cut(s) | 677, 788 |
| Aor13HI | TCCGGA | 1 cut(s) | 1072 |
| ApeKI | GCWGC | 1 cut(s) | 800 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 413, 474 |
| AspS9I | GGNCC | 1 cut(s) | 1023 |
| AsuHPI | GGTGA | 3 cut(s) | 50, 163, 1280 |
| AvaI | CYCGRG | 2 cut(s) | 677, 788 |
| AvaII | GGWCC | 1 cut(s) | 1023 |
| BamHI | GGATCC | 1 cut(s) | 638 |
| BanII | GRGCYC | 1 cut(s) | 789 |
| BbsI | GAAGAC | 1 cut(s) | 1061 |
| BbvI | GCAGC | 1 cut(s) | 812 |
| BccI | CCATC | 2 cut(s) | 642, 703 |
| BceAI | ACGGC | 1 cut(s) | 328 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 658, 692 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BfaI | CTAG | 1 cut(s) | 14 |
| BfmI | CTRYAG | 1 cut(s) | 877 |
| BfrI | CTTAAG | 1 cut(s) | 608 |
| BfuAI | ACCTGC | 1 cut(s) | 884 |
| BglII | AGATCT | 1 cut(s) | 1177 |
| BisI | GCNGC | 1 cut(s) | 801 |
| BlsI | GCNGC | 1 cut(s) | 802 |
| BmcAI | AGTACT | 1 cut(s) | 509 |
| Bme1390I | CCNGG | 1 cut(s) | 63 |
| Bme18I | GGWCC | 1 cut(s) | 1023 |
| BmeT110I | CYCGRG | 2 cut(s) | 677, 788 |
| BmgT120I | GGNCC | 1 cut(s) | 1023 |
| BmiI | GGNNCC | 2 cut(s) | 640, 1314 |
| BmrFI | CCNGG | 1 cut(s) | 63 |
| BmrI | ACTGGG | 1 cut(s) | 792 |
| BmsI | GCATC | 2 cut(s) | 587, 968 |
| BmuI | ACTGGG | 1 cut(s) | 792 |
| BpiI | GAAGAC | 1 cut(s) | 1061 |
| BpuEI | CTTGAG | 1 cut(s) | 644 |
| BsaBI | GATNNNNATC | 2 cut(s) | 312, 637 |
| BsaJI | CCNNGG | 2 cut(s) | 61, 62 |
| BsaWI | WCCGGW | 1 cut(s) | 1072 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 648 |
| Bse1I | ACTGG | 2 cut(s) | 787, 950 |
| Bse8I | GATNNNNATC | 2 cut(s) | 312, 637 |
| BseAI | TCCGGA | 1 cut(s) | 1072 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 2 cut(s) | 61, 62 |
| BseGI | GGATG | 3 cut(s) | 355, 602, 983 |
| BseJI | GATNNNNATC | 2 cut(s) | 312, 637 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 648 |
| BseNI | ACTGG | 2 cut(s) | 787, 950 |
| BseRI | GAGGAG | 1 cut(s) | 713 |
| BseXI | GCAGC | 1 cut(s) | 812 |
| BsiHKCI | CYCGRG | 2 cut(s) | 677, 788 |
| BsiSI | CCGG | 1 cut(s) | 1073 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 648 |
| BsmI | GAATGC | 1 cut(s) | 190 |
| BsoBI | CYCGRG | 2 cut(s) | 677, 788 |
| Bsp1286I | GDGCHC | 1 cut(s) | 789 |
| Bsp13I | TCCGGA | 1 cut(s) | 1072 |
| Bsp143I | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| BspEI | TCCGGA | 1 cut(s) | 1072 |
| BspHI | TCATGA | 2 cut(s) | 88, 441 |
| BspLI | GGNNCC | 2 cut(s) | 640, 1314 |
| BspMAI | CTGCAG | 1 cut(s) | 881 |
| BspMI | ACCTGC | 1 cut(s) | 884 |
| BspPI | GGATC | 2 cut(s) | 633, 646 |
| BspTI | CTTAAG | 1 cut(s) | 608 |
| BsrI | ACTGG | 2 cut(s) | 787, 950 |
| BssECI | CCNNGG | 2 cut(s) | 61, 62 |
| BssMI | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 2 cut(s) | 392, 894 |
| Bst6I | CTCTTC | 1 cut(s) | 1327 |
| BstAFI | CTTAAG | 1 cut(s) | 608 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 2 cut(s) | 11, 241 |
| BstDEI | CTNAG | 5 cut(s) | 518, 590, 910, 1109, 1181 |
| BstF5I | GGATG | 3 cut(s) | 355, 602, 983 |
| BstKTI | GATC | 5 cut(s) | 641, 1045, 1180, 1196, 1242 |
| BstMBI | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 10, 952, 961 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstSCI | CCNGG | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 1 cut(s) | 877 |
| BstV1I | GCAGC | 1 cut(s) | 812 |
| BstV2I | GAAGAC | 1 cut(s) | 1061 |
| BstX2I | RGATCY | 2 cut(s) | 638, 1177 |
| BstYI | RGATCY | 2 cut(s) | 638, 1177 |
| BtsCI | GGATG | 3 cut(s) | 355, 602, 983 |
| BtsIMutI | CAGTG | 2 cut(s) | 397, 957 |
| BveI | ACCTGC | 1 cut(s) | 884 |
| Cac8I | GCNNGC | 2 cut(s) | 11, 241 |
| CciI | TCATGA | 2 cut(s) | 88, 441 |
| Cfr13I | GGNCC | 1 cut(s) | 1023 |
| Csp6I | GTAC | 3 cut(s) | 100, 508, 882 |
| CviAII | CATG | 4 cut(s) | 5, 89, 129, 442 |
| CviJI | RGCY | 7 cut(s) | 9, 433, 495, 652, 676, 787, 964 |
| CviKI_1 | RGCY | 7 cut(s) | 9, 433, 495, 652, 676, 787, 964 |
| CviQI | GTAC | 3 cut(s) | 100, 508, 882 |
| DdeI | CTNAG | 5 cut(s) | 518, 590, 910, 1109, 1181 |
| DpnI | GATC | 5 cut(s) | 640, 1044, 1179, 1195, 1241 |
| DpnII | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| Eam1104I | CTCTTC | 1 cut(s) | 1327 |
| EarI | CTCTTC | 1 cut(s) | 1327 |
| Eco24I | GRGCYC | 1 cut(s) | 789 |
| Eco47I | GGWCC | 1 cut(s) | 1023 |
| Eco57I | CTGAAG | 1 cut(s) | 903 |
| Eco88I | CYCGRG | 2 cut(s) | 677, 788 |
| EcoRI | GAATTC | 2 cut(s) | 413, 461 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 789 |
| FaeI | CATG | 4 cut(s) | 8, 92, 132, 445 |
| FatI | CATG | 4 cut(s) | 4, 88, 128, 441 |
| FauNDI | CATATG | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 1 cut(s) | 801 |
| FokI | GGATG | 3 cut(s) | 342, 609, 990 |
| FriOI | GRGCYC | 1 cut(s) | 789 |
| Fsp4HI | GCNGC | 1 cut(s) | 801 |
| FspBI | CTAG | 1 cut(s) | 14 |
| GluI | GCNGC | 1 cut(s) | 801 |
| HapII | CCGG | 1 cut(s) | 1073 |
| Hin1II | CATG | 4 cut(s) | 8, 92, 132, 445 |
| HincII | GTYRAC | 1 cut(s) | 1096 |
| HindII | GTYRAC | 1 cut(s) | 1096 |
| HindIII | AAGCTT | 2 cut(s) | 431, 962 |
| HinfI | GANTC | 8 cut(s) | 47, 514, 551, 561, 586, 713, 1103, 1303 |
| HpaII | CCGG | 1 cut(s) | 1073 |
| HphI | GGTGA | 3 cut(s) | 50, 163, 1280 |
| Hpy166II | GTNNAC | 5 cut(s) | 40, 100, 299, 1026, 1096 |
| Hpy188I | TCNGA | 4 cut(s) | 307, 922, 991, 1239 |
| Hpy8I | GTNNAC | 5 cut(s) | 40, 100, 299, 1026, 1096 |
| HpyAV | CCTTC | 3 cut(s) | 403, 653, 771 |
| HpyCH4III | ACNGT | 2 cut(s) | 392, 894 |
| HpyCH4IV | ACGT | 3 cut(s) | 70, 255, 1168 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 10, 952, 961 |
| HpyF3I | CTNAG | 5 cut(s) | 518, 590, 910, 1109, 1181 |
| HpySE526I | ACGT | 3 cut(s) | 70, 255, 1168 |
| Hsp92II | CATG | 4 cut(s) | 8, 92, 132, 445 |
| Kpn2I | TCCGGA | 1 cut(s) | 1072 |
| Kzo9I | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| Lsp1109I | GCAGC | 1 cut(s) | 812 |
| LweI | GCATC | 2 cut(s) | 587, 968 |
| MaeI | CTAG | 1 cut(s) | 14 |
| MaeII | ACGT | 3 cut(s) | 70, 255, 1168 |
| MaeIII | GTNAC | 2 cut(s) | 1052, 1104 |
| MalI | GATC | 5 cut(s) | 640, 1044, 1179, 1195, 1241 |
| MboI | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| MboII | GAAGA | 4 cut(s) | 56, 104, 1061, 1314 |
| MfeI | CAATTG | 2 cut(s) | 404, 768 |
| MflI | RGATCY | 2 cut(s) | 638, 1177 |
| MhlI | GDGCHC | 1 cut(s) | 789 |
| MlyI | GAGTC | 1 cut(s) | 1112 |
| MmeI | TCCRAC | 3 cut(s) | 538, 1179, 1266 |
| MnlI | CCTC | 8 cut(s) | 273, 446, 606, 691, 694, 842, 1267, 1326 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroI | TCCGGA | 1 cut(s) | 1072 |
| MroXI | GAANNNNTTC | 2 cut(s) | 413, 474 |
| MslI | CAYNNNNRTG | 2 cut(s) | 93, 149 |
| MspCI | CTTAAG | 1 cut(s) | 608 |
| MspI | CCGG | 1 cut(s) | 1073 |
| MspR9I | CCNGG | 1 cut(s) | 63 |
| MunI | CAATTG | 2 cut(s) | 404, 768 |
| Mva1269I | GAATGC | 1 cut(s) | 190 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 10, 952, 961 |
| NdeI | CATATG | 1 cut(s) | 204 |
| NdeII | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| NlaIII | CATG | 4 cut(s) | 8, 92, 132, 445 |
| NlaIV | GGNNCC | 2 cut(s) | 640, 1314 |
| NmuCI | GTSAC | 1 cut(s) | 1104 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PaeR7I | CTCGAG | 1 cut(s) | 677 |
| PagI | TCATGA | 2 cut(s) | 88, 441 |
| PasI | CCCWGGG | 1 cut(s) | 62 |
| PctI | GAATGC | 1 cut(s) | 190 |
| PdmI | GAANNNNTTC | 2 cut(s) | 413, 474 |
| PfeI | GAWTC | 7 cut(s) | 47, 514, 551, 561, 586, 713, 1303 |
| PkrI | GCNGC | 1 cut(s) | 802 |
| PleI | GAGTC | 1 cut(s) | 1111 |
| PpsI | GAGTC | 1 cut(s) | 1111 |
| PsiI | TTATAA | 1 cut(s) | 227 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 2 cut(s) | 640, 1314 |
| PspPI | GGNCC | 1 cut(s) | 1023 |
| PstI | CTGCAG | 1 cut(s) | 881 |
| PsuI | RGATCY | 2 cut(s) | 638, 1177 |
| RsaI | GTAC | 3 cut(s) | 101, 509, 883 |
| RsaNI | GTAC | 3 cut(s) | 100, 508, 882 |
| RseI | CAYNNNNRTG | 2 cut(s) | 93, 149 |
| SatI | GCNGC | 1 cut(s) | 801 |
| Sau3AI | GATC | 5 cut(s) | 638, 1042, 1177, 1193, 1239 |
| Sau96I | GGNCC | 1 cut(s) | 1023 |
| ScaI | AGTACT | 1 cut(s) | 509 |
| SchI | GAGTC | 1 cut(s) | 1112 |
| ScrFI | CCNGG | 1 cut(s) | 63 |
| SduI | GDGCHC | 1 cut(s) | 789 |
| SfaNI | GCATC | 2 cut(s) | 587, 968 |
| SfcI | CTRYAG | 1 cut(s) | 877 |
| Sfr274I | CTCGAG | 1 cut(s) | 677 |
| SinI | GGWCC | 1 cut(s) | 1023 |
| SlaI | CTCGAG | 1 cut(s) | 677 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 93, 149 |
| SmlI | CTYRAG | 3 cut(s) | 608, 659, 677 |
| SmoI | CTYRAG | 3 cut(s) | 608, 659, 677 |
| SspMI | CTAG | 1 cut(s) | 14 |
| StyD4I | CCNGG | 1 cut(s) | 61 |
| TaaI | ACNGT | 2 cut(s) | 392, 894 |
| TaiI | ACGT | 3 cut(s) | 73, 258, 1171 |
| TaqI | TCGA | 3 cut(s) | 646, 678, 1049 |
| TatI | WGTACW | 1 cut(s) | 507 |
| TfiI | GAWTC | 7 cut(s) | 47, 514, 551, 561, 586, 713, 1303 |
| TscAI | CASTG | 2 cut(s) | 397, 957 |
| TseFI | GTSAC | 1 cut(s) | 1104 |
| TseI | GCWGC | 1 cut(s) | 800 |
| Tsp45I | GTSAC | 1 cut(s) | 1104 |
| TspDTI | ATGAA | 7 cut(s) | 77, 105, 302, 430, 458, 753, 879 |
| TspGWI | ACGGA | 3 cut(s) | 544, 973, 990 |
| TspRI | CASTG | 2 cut(s) | 397, 957 |
| Vha464I | CTTAAG | 1 cut(s) | 608 |
| VpaK11BI | GGWCC | 1 cut(s) | 1023 |
| XhoI | CTCGAG | 1 cut(s) | 677 |
| XmnI | GAANNNNTTC | 2 cut(s) | 413, 474 |
| XspI | CTAG | 1 cut(s) | 14 |
| ZrmI | AGTACT | 1 cut(s) | 509 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |