TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ist1 | PF03398 | 127 - 165 | 2e-06 | Regulator of Vps4 activity in the MVB pathway |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 4 cut(s) | 60, 123, 211, 302 |
| AfaI | GTAC | 1 cut(s) | 27 |
| AgsI | TTSAA | 1 cut(s) | 488 |
| AluBI | AGCT | 3 cut(s) | 70, 354, 440 |
| AluI | AGCT | 3 cut(s) | 70, 354, 440 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 204 |
| AoxI | GGCC | 1 cut(s) | 476 |
| ApeKI | GCWGC | 2 cut(s) | 195, 437 |
| ApoI | RAATTY | 4 cut(s) | 60, 123, 211, 302 |
| AsuII | TTCGAA | 1 cut(s) | 128 |
| AxyI | CCTNAGG | 1 cut(s) | 396 |
| BbvI | GCAGC | 2 cut(s) | 182, 449 |
| BccI | CCATC | 2 cut(s) | 172, 217 |
| BceAI | ACGGC | 1 cut(s) | 398 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 34, 68, 372, 406 |
| BfaI | CTAG | 1 cut(s) | 441 |
| BfmI | CTRYAG | 3 cut(s) | 43, 196, 435 |
| BisI | GCNGC | 2 cut(s) | 196, 438 |
| BlsI | GCNGC | 2 cut(s) | 197, 439 |
| BmiI | GGNNCC | 1 cut(s) | 339 |
| BmsI | GCATC | 3 cut(s) | 250, 385, 428 |
| Bpu14I | TTCGAA | 1 cut(s) | 128 |
| BpuEI | CTTGAG | 1 cut(s) | 40 |
| BsaBI | GATNNNNATC | 1 cut(s) | 264 |
| Bse1I | ACTGG | 1 cut(s) | 320 |
| Bse21I | CCTNAGG | 1 cut(s) | 396 |
| Bse8I | GATNNNNATC | 1 cut(s) | 264 |
| BseGI | GGATG | 3 cut(s) | 100, 241, 265 |
| BseJI | GATNNNNATC | 1 cut(s) | 264 |
| BseMII | CTCAG | 2 cut(s) | 305, 387 |
| BseNI | ACTGG | 1 cut(s) | 320 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BseXI | GCAGC | 2 cut(s) | 182, 449 |
| BshFI | GGCC | 1 cut(s) | 478 |
| BslFI | GGGAC | 1 cut(s) | 401 |
| BsmFI | GGGAC | 1 cut(s) | 401 |
| BsnI | GGCC | 1 cut(s) | 478 |
| Bsp119I | TTCGAA | 1 cut(s) | 128 |
| Bsp143I | GATC | 1 cut(s) | 265 |
| BspANI | GGCC | 1 cut(s) | 478 |
| BspCNI | CTCAG | 2 cut(s) | 304, 388 |
| BspLI | GGNNCC | 1 cut(s) | 339 |
| BspMAI | CTGCAG | 3 cut(s) | 47, 200, 439 |
| BspT104I | TTCGAA | 1 cut(s) | 128 |
| BsrI | ACTGG | 1 cut(s) | 320 |
| BssMI | GATC | 1 cut(s) | 265 |
| Bst6I | CTCTTC | 1 cut(s) | 275 |
| BstBI | TTCGAA | 1 cut(s) | 128 |
| BstDEI | CTNAG | 3 cut(s) | 291, 396, 405 |
| BstF5I | GGATG | 3 cut(s) | 100, 241, 265 |
| BstKTI | GATC | 1 cut(s) | 268 |
| BstMBI | GATC | 1 cut(s) | 265 |
| BstSFI | CTRYAG | 3 cut(s) | 43, 196, 435 |
| BstV1I | GCAGC | 2 cut(s) | 182, 449 |
| Bsu36I | CCTNAGG | 1 cut(s) | 396 |
| BsuRI | GGCC | 1 cut(s) | 478 |
| BtsCI | GGATG | 3 cut(s) | 100, 241, 265 |
| CaiI | CAGNNNCTG | 1 cut(s) | 204 |
| Csp6I | GTAC | 1 cut(s) | 26 |
| CviAII | CATG | 1 cut(s) | 370 |
| CviJI | RGCY | 7 cut(s) | 15, 52, 70, 354, 413, 440, 478 |
| CviKI_1 | RGCY | 7 cut(s) | 15, 52, 70, 354, 413, 440, 478 |
| CviQI | GTAC | 1 cut(s) | 26 |
| DdeI | CTNAG | 3 cut(s) | 291, 396, 405 |
| DpnI | GATC | 1 cut(s) | 267 |
| DpnII | GATC | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 1 cut(s) | 275 |
| EarI | CTCTTC | 1 cut(s) | 275 |
| Eco81I | CCTNAGG | 1 cut(s) | 396 |
| FaeI | CATG | 1 cut(s) | 373 |
| FaiI | YATR | 1 cut(s) | 371 |
| FaqI | GGGAC | 1 cut(s) | 401 |
| FatI | CATG | 1 cut(s) | 369 |
| Fnu4HI | GCNGC | 2 cut(s) | 196, 438 |
| FokI | GGATG | 3 cut(s) | 107, 248, 272 |
| Fsp4HI | GCNGC | 2 cut(s) | 196, 438 |
| FspBI | CTAG | 1 cut(s) | 441 |
| GluI | GCNGC | 2 cut(s) | 196, 438 |
| HaeIII | GGCC | 1 cut(s) | 478 |
| Hin1II | CATG | 1 cut(s) | 373 |
| HinfI | GANTC | 4 cut(s) | 158, 201, 279, 401 |
| Hpy188I | TCNGA | 2 cut(s) | 222, 451 |
| Hpy188III | TCNNGA | 3 cut(s) | 65, 276, 488 |
| Hpy99I | CGWCG | 1 cut(s) | 387 |
| HpyAV | CCTTC | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 4 cut(s) | 45, 198, 419, 437 |
| HpyF3I | CTNAG | 3 cut(s) | 291, 396, 405 |
| Hsp92II | CATG | 1 cut(s) | 373 |
| Kzo9I | GATC | 1 cut(s) | 265 |
| LmnI | GCTCC | 1 cut(s) | 148 |
| LpnPI | CCDG | 4 cut(s) | 78, 333, 408, 471 |
| Lsp1109I | GCAGC | 2 cut(s) | 182, 449 |
| LweI | GCATC | 3 cut(s) | 250, 385, 428 |
| MaeI | CTAG | 1 cut(s) | 441 |
| MaeIII | GTNAC | 2 cut(s) | 430, 467 |
| MalI | GATC | 1 cut(s) | 267 |
| MboI | GATC | 1 cut(s) | 265 |
| MboII | GAAGA | 2 cut(s) | 262, 279 |
| MluCI | AATT | 8 cut(s) | 9, 31, 60, 123, 190, 211, 302, 309 |
| MlyI | GAGTC | 2 cut(s) | 195, 273 |
| MnlI | CCTC | 6 cut(s) | 15, 98, 166, 247, 328, 391 |
| MspA1I | CMGCKG | 1 cut(s) | 354 |
| NdeII | GATC | 1 cut(s) | 265 |
| NlaIII | CATG | 1 cut(s) | 373 |
| NlaIV | GGNNCC | 1 cut(s) | 339 |
| NmuCI | GTSAC | 1 cut(s) | 467 |
| NspV | TTCGAA | 1 cut(s) | 128 |
| PfeI | GAWTC | 2 cut(s) | 158, 401 |
| PflFI | GACNNNGTC | 1 cut(s) | 204 |
| PkrI | GCNGC | 2 cut(s) | 197, 439 |
| PleI | GAGTC | 2 cut(s) | 195, 273 |
| PpsI | GAGTC | 2 cut(s) | 195, 273 |
| PspN4I | GGNNCC | 1 cut(s) | 339 |
| PstI | CTGCAG | 3 cut(s) | 47, 200, 439 |
| PstNI | CAGNNNCTG | 1 cut(s) | 204 |
| PsyI | GACNNNGTC | 1 cut(s) | 204 |
| PvuII | CAGCTG | 1 cut(s) | 354 |
| RsaI | GTAC | 1 cut(s) | 27 |
| RsaNI | GTAC | 1 cut(s) | 26 |
| SatI | GCNGC | 2 cut(s) | 196, 438 |
| Sau3AI | GATC | 1 cut(s) | 265 |
| SchI | GAGTC | 2 cut(s) | 195, 273 |
| SetI | ASST | 5 cut(s) | 72, 258, 339, 356, 442 |
| SfaNI | GCATC | 3 cut(s) | 250, 385, 428 |
| SfcI | CTRYAG | 3 cut(s) | 43, 196, 435 |
| SfuI | TTCGAA | 1 cut(s) | 128 |
| SmlI | CTYRAG | 1 cut(s) | 19 |
| SmoI | CTYRAG | 1 cut(s) | 19 |
| Sse9I | AATT | 8 cut(s) | 9, 31, 60, 123, 190, 211, 302, 309 |
| SspMI | CTAG | 1 cut(s) | 441 |
| TaqI | TCGA | 3 cut(s) | 128, 277, 382 |
| TasI | AATT | 8 cut(s) | 9, 31, 60, 123, 190, 211, 302, 309 |
| TfiI | GAWTC | 2 cut(s) | 158, 401 |
| TseFI | GTSAC | 1 cut(s) | 467 |
| TseI | GCWGC | 2 cut(s) | 195, 437 |
| Tsp45I | GTSAC | 1 cut(s) | 467 |
| TspDTI | ATGAA | 2 cut(s) | 17, 358 |
| Tth111I | GACNNNGTC | 1 cut(s) | 204 |
| XapI | RAATTY | 4 cut(s) | 60, 123, 211, 302 |
| XspI | CTAG | 1 cut(s) | 441 |