TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 71 - 235 | 1.6e-54 | TIR domain |
| TIR_2 | PF13676 | 73 - 168 | 3.2e-14 | TIR domain |
| WHD_ROQ1 | PF23282 | 395 - 463 | 5e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 649 - 753 | 4.7e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 670 - 740 | 6.5e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 864 |
| AccI | GTMKAC | 1 cut(s) | 1414 |
| AccII | CGCG | 3 cut(s) | 247, 1440, 1828 |
| AciI | CCGC | 2 cut(s) | 274, 1741 |
| AcsI | RAATTY | 3 cut(s) | 661, 1050, 1848 |
| AcuI | CTGAAG | 1 cut(s) | 214 |
| AfaI | GTAC | 2 cut(s) | 272, 479 |
| AfeI | AGCGCT | 1 cut(s) | 945 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 131, 280, 1633, 1931 |
| AflII | CTTAAG | 2 cut(s) | 770, 2051 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2083 |
| AjnI | CCWGG | 2 cut(s) | 11, 528 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1639, 1671, 1705, 1737 |
| Alw26I | GTCTC | 5 cut(s) | 1286, 1391, 1586, 2070, 2175 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1466 |
| Aor51HI | AGCGCT | 1 cut(s) | 945 |
| AoxI | GGCC | 8 cut(s) | 25, 33, 262, 526, 1302, 1694, 1760, 2155 |
| ApaI | GGGCCC | 2 cut(s) | 1698, 1764 |
| ApeKI | GCWGC | 3 cut(s) | 614, 2026, 2181 |
| ApoI | RAATTY | 3 cut(s) | 661, 1050, 1848 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 392, 424 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1374, 2295 |
| AspLEI | GCGC | 4 cut(s) | 249, 946, 1746, 1830 |
| AsuHPI | GGTGA | 4 cut(s) | 75, 542, 548, 1957 |
| AvaII | GGWCC | 5 cut(s) | 15, 63, 236, 1444, 1636 |
| BaeGI | GKGCMC | 2 cut(s) | 1698, 1764 |
| BamHI | GGATCC | 1 cut(s) | 1174 |
| BanII | GRGCYC | 2 cut(s) | 1698, 1764 |
| BauI | CACGAG | 1 cut(s) | 753 |
| BbsI | GAAGAC | 3 cut(s) | 402, 1362, 1589 |
| BbvI | GCAGC | 3 cut(s) | 626, 2013, 2168 |
| BccI | CCATC | 5 cut(s) | 25, 638, 1751, 1829, 2212 |
| BceAI | ACGGC | 1 cut(s) | 2267 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1519, 1553, 2018, 2052 |
| BciT130I | CCWGG | 2 cut(s) | 13, 530 |
| BcoDI | GTCTC | 5 cut(s) | 1286, 1391, 1586, 2070, 2175 |
| BfaI | CTAG | 1 cut(s) | 60 |
| BfmI | CTRYAG | 3 cut(s) | 717, 723, 1900 |
| BfoI | RGCGCY | 1 cut(s) | 947 |
| BfrI | CTTAAG | 2 cut(s) | 770, 2051 |
| BglII | AGATCT | 1 cut(s) | 441 |
| BisI | GCNGC | 4 cut(s) | 615, 1742, 2027, 2182 |
| BlsI | GCNGC | 4 cut(s) | 616, 1743, 2028, 2183 |
| Bme1390I | CCNGG | 2 cut(s) | 13, 530 |
| Bme18I | GGWCC | 5 cut(s) | 15, 63, 236, 1444, 1636 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2083 |
| BmiI | GGNNCC | 7 cut(s) | 17, 136, 1035, 1176, 1637, 1696, 1762 |
| BmrFI | CCNGG | 2 cut(s) | 13, 530 |
| BmrI | ACTGGG | 1 cut(s) | 476 |
| BmsI | GCATC | 8 cut(s) | 89, 529, 661, 1087, 1329, 1491, 2038, 2110 |
| BmuI | ACTGGG | 1 cut(s) | 476 |
| BpiI | GAAGAC | 3 cut(s) | 402, 1362, 1589 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 109, 141 |
| BpmI | CTGGAG | 3 cut(s) | 1758, 1967, 2255 |
| Bpu10I | CCTNAGC | 1 cut(s) | 554 |
| BpuEI | CTTGAG | 1 cut(s) | 1469 |
| BsaBI | GATNNNNATC | 3 cut(s) | 111, 748, 2244 |
| BsaJI | CCNNGG | 3 cut(s) | 11, 66, 1782 |
| BsaWI | WCCGGW | 1 cut(s) | 736 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1593, 1623 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 131, 280, 1633, 1931 |
| Bse118I | RCCGGY | 1 cut(s) | 76 |
| Bse1I | ACTGG | 6 cut(s) | 482, 1627, 1649, 1715, 1775, 2158 |
| Bse8I | GATNNNNATC | 3 cut(s) | 111, 748, 2244 |
| BseBI | CCWGG | 2 cut(s) | 13, 530 |
| BseDI | CCNNGG | 3 cut(s) | 11, 66, 1782 |
| BseGI | GGATG | 7 cut(s) | 433, 649, 991, 1344, 1438, 1762, 1921 |
| BseJI | GATNNNNATC | 3 cut(s) | 111, 748, 2244 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 131, 280, 1633, 1931 |
| BseMII | CTCAG | 5 cut(s) | 107, 215, 999, 1077, 2151 |
| BseNI | ACTGG | 6 cut(s) | 482, 1627, 1649, 1715, 1775, 2158 |
| BseRI | GAGGAG | 3 cut(s) | 130, 342, 1509 |
| BseSI | GKGCMC | 2 cut(s) | 1698, 1764 |
| BseXI | GCAGC | 3 cut(s) | 626, 2013, 2168 |
| Bsh1236I | CGCG | 3 cut(s) | 247, 1440, 1828 |
| Bsh1285I | CGRYCG | 1 cut(s) | 77 |
| BshFI | GGCC | 8 cut(s) | 27, 35, 264, 528, 1304, 1696, 1762, 2157 |
| BsiEI | CGRYCG | 1 cut(s) | 77 |
| BsiSI | CCGG | 2 cut(s) | 77, 737 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 131, 280, 1633, 1931 |
| BsmAI | GTCTC | 5 cut(s) | 1286, 1391, 1586, 2070, 2175 |
| BsnI | GGCC | 8 cut(s) | 27, 35, 264, 528, 1304, 1696, 1762, 2157 |
| Bsp120I | GGGCCC | 2 cut(s) | 1694, 1760 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1698, 1764 |
| Bsp19I | CCATGG | 1 cut(s) | 1782 |
| Bsp68I | TCGCGA | 1 cut(s) | 1440 |
| BspACI | CCGC | 2 cut(s) | 274, 1741 |
| BspANI | GGCC | 8 cut(s) | 27, 35, 264, 528, 1304, 1696, 1762, 2157 |
| BspCNI | CTCAG | 5 cut(s) | 108, 216, 1000, 1078, 2150 |
| BspFNI | CGCG | 3 cut(s) | 247, 1440, 1828 |
| BspLI | GGNNCC | 7 cut(s) | 17, 136, 1035, 1176, 1637, 1696, 1762 |
| BspQI | GCTCTTC | 1 cut(s) | 953 |
| BspTI | CTTAAG | 2 cut(s) | 770, 2051 |
| BsrFI | RCCGGY | 1 cut(s) | 76 |
| BsrI | ACTGG | 6 cut(s) | 482, 1627, 1649, 1715, 1775, 2158 |
| BssAI | RCCGGY | 1 cut(s) | 76 |
| BssECI | CCNNGG | 3 cut(s) | 11, 66, 1782 |
| BssSI | CACGAG | 1 cut(s) | 753 |
| BssT1I | CCWWGG | 2 cut(s) | 66, 1782 |
| Bst2BI | CACGAG | 1 cut(s) | 753 |
| Bst2UI | CCWGG | 2 cut(s) | 13, 530 |
| Bst4CI | ACNGT | 6 cut(s) | 1521, 1588, 1901, 1973, 2114, 2307 |
| Bst6I | CTCTTC | 6 cut(s) | 157, 163, 169, 181, 190, 953 |
| BstAFI | CTTAAG | 2 cut(s) | 770, 2051 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 1 cut(s) | 2099 |
| BstDEI | CTNAG | 9 cut(s) | 116, 224, 554, 1008, 1086, 1876, 2105, 2137, 2262 |
| BstDSI | CCRYGG | 1 cut(s) | 1782 |
| BstF5I | GGATG | 7 cut(s) | 433, 649, 991, 1344, 1438, 1762, 1921 |
| BstFNI | CGCG | 3 cut(s) | 247, 1440, 1828 |
| BstH2I | RGCGCY | 1 cut(s) | 947 |
| BstHHI | GCGC | 4 cut(s) | 249, 946, 1746, 1830 |
| BstMAI | GTCTC | 5 cut(s) | 1286, 1391, 1586, 2070, 2175 |
| BstMCI | CGRYCG | 1 cut(s) | 77 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 404 |
| BstNI | CCWGG | 2 cut(s) | 13, 530 |
| BstNSI | RCATGY | 1 cut(s) | 1209 |
| BstSCI | CCNGG | 2 cut(s) | 11, 528 |
| BstSFI | CTRYAG | 3 cut(s) | 717, 723, 1900 |
| BstSLI | GKGCMC | 2 cut(s) | 1698, 1764 |
| BstUI | CGCG | 3 cut(s) | 247, 1440, 1828 |
| BstV1I | GCAGC | 3 cut(s) | 626, 2013, 2168 |
| BstV2I | GAAGAC | 3 cut(s) | 402, 1362, 1589 |
| BstX2I | RGATCY | 7 cut(s) | 4, 106, 112, 441, 499, 1174, 2239 |
| BstYI | RGATCY | 7 cut(s) | 4, 106, 112, 441, 499, 1174, 2239 |
| BsuRI | GGCC | 8 cut(s) | 27, 35, 264, 528, 1304, 1696, 1762, 2157 |
| BtgI | CCRYGG | 1 cut(s) | 1782 |
| BtsCI | GGATG | 7 cut(s) | 433, 649, 991, 1344, 1438, 1762, 1921 |
| BtsIMutI | CAGTG | 3 cut(s) | 1969, 2119, 2151 |
| BtuMI | TCGCGA | 1 cut(s) | 1440 |
| Cac8I | GCNNGC | 1 cut(s) | 2099 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1466 |
| CfoI | GCGC | 4 cut(s) | 249, 946, 1746, 1830 |
| Cfr10I | RCCGGY | 1 cut(s) | 76 |
| CseI | GACGC | 1 cut(s) | 396 |
| Csp6I | GTAC | 2 cut(s) | 271, 478 |
| CviQI | GTAC | 2 cut(s) | 271, 478 |
| DdeI | CTNAG | 9 cut(s) | 116, 224, 554, 1008, 1086, 1876, 2105, 2137, 2262 |
| DraI | TTTAAA | 1 cut(s) | 1216 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2083 |
| Eam1104I | CTCTTC | 6 cut(s) | 157, 163, 169, 181, 190, 953 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2083 |
| EarI | CTCTTC | 6 cut(s) | 157, 163, 169, 181, 190, 953 |
| Eco130I | CCWWGG | 2 cut(s) | 66, 1782 |
| Eco147I | AGGCCT | 1 cut(s) | 1304 |
| Eco24I | GRGCYC | 2 cut(s) | 1698, 1764 |
| Eco32I | GATATC | 1 cut(s) | 690 |
| Eco47I | GGWCC | 5 cut(s) | 15, 63, 236, 1444, 1636 |
| Eco47III | AGCGCT | 1 cut(s) | 945 |
| Eco57I | CTGAAG | 1 cut(s) | 214 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1444, 1636, 1695, 1761 |
| EcoRI | GAATTC | 1 cut(s) | 1848 |
| EcoRII | CCWGG | 2 cut(s) | 11, 528 |
| EcoRV | GATATC | 1 cut(s) | 690 |
| EcoT14I | CCWWGG | 2 cut(s) | 66, 1782 |
| EcoT22I | ATGCAT | 2 cut(s) | 1102, 1344 |
| EcoT38I | GRGCYC | 2 cut(s) | 1698, 1764 |
| ErhI | CCWWGG | 2 cut(s) | 66, 1782 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 407, 439, 557, 589, 1179, 1211 |
| FauNDI | CATATG | 2 cut(s) | 981, 1671 |
| FblI | GTMKAC | 1 cut(s) | 1414 |
| Fnu4HI | GCNGC | 4 cut(s) | 615, 1742, 2027, 2182 |
| FokI | GGATG | 7 cut(s) | 440, 656, 998, 1351, 1445, 1769, 1908 |
| FriOI | GRGCYC | 2 cut(s) | 1698, 1764 |
| Fsp4HI | GCNGC | 4 cut(s) | 615, 1742, 2027, 2182 |
| FspBI | CTAG | 1 cut(s) | 60 |
| GlaI | GCGC | 4 cut(s) | 248, 945, 1745, 1829 |
| GluI | GCNGC | 4 cut(s) | 615, 1742, 2027, 2182 |
| GsuI | CTGGAG | 3 cut(s) | 1758, 1967, 2255 |
| HaeII | RGCGCY | 1 cut(s) | 947 |
| HaeIII | GGCC | 8 cut(s) | 27, 35, 264, 528, 1304, 1696, 1762, 2157 |
| HapII | CCGG | 2 cut(s) | 77, 737 |
| HgaI | GACGC | 1 cut(s) | 396 |
| HhaI | GCGC | 4 cut(s) | 249, 946, 1746, 1830 |
| Hin6I | GCGC | 4 cut(s) | 247, 944, 1744, 1828 |
| HinP1I | GCGC | 4 cut(s) | 247, 944, 1744, 1828 |
| HindIII | AAGCTT | 4 cut(s) | 936, 1534, 1873, 2264 |
| HpaII | CCGG | 2 cut(s) | 77, 737 |
| HphI | GGTGA | 4 cut(s) | 75, 542, 548, 1957 |
| Hpy166II | GTNNAC | 3 cut(s) | 207, 478, 1415 |
| Hpy188I | TCNGA | 7 cut(s) | 117, 134, 225, 233, 508, 1179, 2290 |
| Hpy8I | GTNNAC | 3 cut(s) | 207, 478, 1415 |
| HpyCH4III | ACNGT | 6 cut(s) | 1521, 1588, 1901, 1973, 2114, 2307 |
| HpyCH4IV | ACGT | 1 cut(s) | 2230 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 404 |
| HpyF3I | CTNAG | 9 cut(s) | 116, 224, 554, 1008, 1086, 1876, 2105, 2137, 2262 |
| HpySE526I | ACGT | 1 cut(s) | 2230 |
| HspAI | GCGC | 4 cut(s) | 247, 944, 1744, 1828 |
| LguI | GCTCTTC | 1 cut(s) | 953 |
| LmnI | GCTCC | 4 cut(s) | 134, 346, 1888, 1986 |
| Lsp1109I | GCAGC | 3 cut(s) | 626, 2013, 2168 |
| LweI | GCATC | 8 cut(s) | 89, 529, 661, 1087, 1329, 1491, 2038, 2110 |
| MaeI | CTAG | 1 cut(s) | 60 |
| MaeII | ACGT | 1 cut(s) | 2230 |
| MaeIII | GTNAC | 6 cut(s) | 1157, 1220, 1259, 1777, 2114, 2269 |
| MfeI | CAATTG | 2 cut(s) | 543, 675 |
| MflI | RGATCY | 7 cut(s) | 4, 106, 112, 441, 499, 1174, 2239 |
| MhlI | GDGCHC | 2 cut(s) | 1698, 1764 |
| MlyI | GAGTC | 3 cut(s) | 1172, 1659, 1765 |
| MmeI | TCCRAC | 5 cut(s) | 572, 721, 1026, 2122, 2303 |
| Mph1103I | ATGCAT | 2 cut(s) | 1102, 1344 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1374, 2295 |
| MslI | CAYNNNNRTG | 3 cut(s) | 984, 1337, 1751 |
| MspCI | CTTAAG | 2 cut(s) | 770, 2051 |
| MspI | CCGG | 2 cut(s) | 77, 737 |
| MspR9I | CCNGG | 2 cut(s) | 13, 530 |
| MunI | CAATTG | 2 cut(s) | 543, 675 |
| MvaI | CCWGG | 2 cut(s) | 13, 530 |
| MvnI | CGCG | 3 cut(s) | 247, 1440, 1828 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 404 |
| NcoI | CCATGG | 1 cut(s) | 1782 |
| NdeI | CATATG | 2 cut(s) | 981, 1671 |
| NlaIV | GGNNCC | 7 cut(s) | 17, 136, 1035, 1176, 1637, 1696, 1762 |
| NmuCI | GTSAC | 2 cut(s) | 1259, 2114 |
| NruI | TCGCGA | 1 cut(s) | 1440 |
| NsiI | ATGCAT | 2 cut(s) | 1102, 1344 |
| NspI | RCATGY | 1 cut(s) | 1209 |
| PceI | AGGCCT | 1 cut(s) | 1304 |
| PciSI | GCTCTTC | 1 cut(s) | 953 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1374, 2295 |
| PfeI | GAWTC | 7 cut(s) | 708, 749, 920, 1135, 1385, 2092, 2291 |
| PkrI | GCNGC | 4 cut(s) | 616, 1743, 2028, 2183 |
| PleI | GAGTC | 3 cut(s) | 1171, 1659, 1765 |
| PpsI | GAGTC | 3 cut(s) | 1171, 1659, 1765 |
| PpuMI | RGGWCCY | 2 cut(s) | 1444, 1636 |
| PsiI | TTATAA | 1 cut(s) | 864 |
| Psp5II | RGGWCCY | 2 cut(s) | 1444, 1636 |
| Psp6I | CCWGG | 2 cut(s) | 11, 528 |
| PspGI | CCWGG | 2 cut(s) | 11, 528 |
| PspN4I | GGNNCC | 7 cut(s) | 17, 136, 1035, 1176, 1637, 1696, 1762 |
| PspOMI | GGGCCC | 2 cut(s) | 1694, 1760 |
| PspPPI | RGGWCCY | 2 cut(s) | 1444, 1636 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1466 |
| PsuI | RGATCY | 7 cut(s) | 4, 106, 112, 441, 499, 1174, 2239 |
| RruI | TCGCGA | 1 cut(s) | 1440 |
| RsaI | GTAC | 2 cut(s) | 272, 479 |
| RsaNI | GTAC | 2 cut(s) | 271, 478 |
| RseI | CAYNNNNRTG | 3 cut(s) | 984, 1337, 1751 |
| SapI | GCTCTTC | 1 cut(s) | 953 |
| SatI | GCNGC | 4 cut(s) | 615, 1742, 2027, 2182 |
| SchI | GAGTC | 3 cut(s) | 1172, 1659, 1765 |
| ScrFI | CCNGG | 2 cut(s) | 13, 530 |
| SduI | GDGCHC | 2 cut(s) | 1698, 1764 |
| SfaNI | GCATC | 8 cut(s) | 89, 529, 661, 1087, 1329, 1491, 2038, 2110 |
| SfcI | CTRYAG | 3 cut(s) | 717, 723, 1900 |
| SinI | GGWCC | 5 cut(s) | 15, 63, 236, 1444, 1636 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 984, 1337, 1751 |
| SmlI | CTYRAG | 3 cut(s) | 770, 1448, 2051 |
| SmoI | CTYRAG | 3 cut(s) | 770, 1448, 2051 |
| SseBI | AGGCCT | 1 cut(s) | 1304 |
| SsiI | CCGC | 2 cut(s) | 274, 1741 |
| SspI | AATATT | 2 cut(s) | 702, 1798 |
| SspMI | CTAG | 1 cut(s) | 60 |
| StuI | AGGCCT | 1 cut(s) | 1304 |
| StyD4I | CCNGG | 2 cut(s) | 11, 528 |
| StyI | CCWWGG | 2 cut(s) | 66, 1782 |
| TaaI | ACNGT | 6 cut(s) | 1521, 1588, 1901, 1973, 2114, 2307 |
| TaiI | ACGT | 1 cut(s) | 2233 |
| TaqI | TCGA | 2 cut(s) | 73, 2207 |
| TaqII | GACCGA | 1 cut(s) | 1562 |
| TauI | GCSGC | 1 cut(s) | 1744 |
| TfiI | GAWTC | 7 cut(s) | 708, 749, 920, 1135, 1385, 2092, 2291 |
| TscAI | CASTG | 3 cut(s) | 1976, 2119, 2158 |
| TseFI | GTSAC | 2 cut(s) | 1259, 2114 |
| TseI | GCWGC | 3 cut(s) | 614, 2026, 2181 |
| Tsp45I | GTSAC | 2 cut(s) | 1259, 2114 |
| TspGWI | ACGGA | 3 cut(s) | 492, 1026, 1931 |
| TspRI | CASTG | 3 cut(s) | 1976, 2119, 2158 |
| Vha464I | CTTAAG | 2 cut(s) | 770, 2051 |
| VpaK11BI | GGWCC | 5 cut(s) | 15, 63, 236, 1444, 1636 |
| XapI | RAATTY | 3 cut(s) | 661, 1050, 1848 |
| XceI | RCATGY | 1 cut(s) | 1209 |
| XmiI | GTMKAC | 1 cut(s) | 1414 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1374, 2295 |
| XspI | CTAG | 1 cut(s) | 60 |
| Zsp2I | ATGCAT | 2 cut(s) | 1102, 1344 |