TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 139 - 164 | 1.6e-06 | SWIM zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 21 |
| AccI | GTMKAC | 2 cut(s) | 251, 974 |
| AclWI | GGATC | 1 cut(s) | 824 |
| AcoI | YGGCCR | 1 cut(s) | 948 |
| AcsI | RAATTY | 6 cut(s) | 119, 221, 272, 551, 732, 1021 |
| AcuI | CTGAAG | 1 cut(s) | 591 |
| AfaI | GTAC | 3 cut(s) | 12, 282, 838 |
| AhlI | ACTAGT | 1 cut(s) | 806 |
| AjiI | CACGTC | 1 cut(s) | 488 |
| AjnI | CCWGG | 1 cut(s) | 348 |
| AluBI | AGCT | 1 cut(s) | 611 |
| AluI | AGCT | 1 cut(s) | 611 |
| Alw26I | GTCTC | 2 cut(s) | 529, 950 |
| AlwI | GGATC | 1 cut(s) | 824 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 611 |
| AoxI | GGCC | 1 cut(s) | 948 |
| ApeKI | GCWGC | 2 cut(s) | 239, 662 |
| ApoI | RAATTY | 6 cut(s) | 119, 221, 272, 551, 732, 1021 |
| AseI | ATTAAT | 2 cut(s) | 72, 692 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 73 |
| AsuHPI | GGTGA | 4 cut(s) | 364, 403, 592, 626 |
| BalI | TGGCCA | 1 cut(s) | 950 |
| BanI | GGYRCC | 1 cut(s) | 21 |
| BbsI | GAAGAC | 1 cut(s) | 183 |
| BbvI | GCAGC | 2 cut(s) | 251, 649 |
| BccI | CCATC | 2 cut(s) | 80, 525 |
| BciT130I | CCWGG | 1 cut(s) | 350 |
| BciVI | GTATCC | 1 cut(s) | 674 |
| BclI | TGATCA | 2 cut(s) | 136, 787 |
| BcoDI | GTCTC | 2 cut(s) | 529, 950 |
| BcuI | ACTAGT | 1 cut(s) | 806 |
| BfaI | CTAG | 1 cut(s) | 807 |
| BfuI | GTATCC | 1 cut(s) | 674 |
| BisI | GCNGC | 2 cut(s) | 240, 663 |
| BlsI | GCNGC | 2 cut(s) | 241, 664 |
| Bme1390I | CCNGG | 1 cut(s) | 350 |
| BmgBI | CACGTC | 1 cut(s) | 488 |
| BmiI | GGNNCC | 1 cut(s) | 23 |
| BmrFI | CCNGG | 1 cut(s) | 350 |
| BmrI | ACTGGG | 1 cut(s) | 850 |
| BmsI | GCATC | 2 cut(s) | 226, 688 |
| BmuI | ACTGGG | 1 cut(s) | 850 |
| BpiI | GAAGAC | 1 cut(s) | 183 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 757, 789 |
| BsaAI | YACGTR | 1 cut(s) | 10 |
| BsaJI | CCNNGG | 2 cut(s) | 798, 951 |
| Bse118I | RCCGGY | 1 cut(s) | 24 |
| Bse1I | ACTGG | 1 cut(s) | 856 |
| Bse3DI | GCAATG | 1 cut(s) | 860 |
| BseBI | CCWGG | 1 cut(s) | 350 |
| BseDI | CCNNGG | 2 cut(s) | 798, 951 |
| BseGI | GGATG | 1 cut(s) | 703 |
| BseMI | GCAATG | 1 cut(s) | 860 |
| BseNI | ACTGG | 1 cut(s) | 856 |
| BseXI | GCAGC | 2 cut(s) | 251, 649 |
| BsgI | GTGCAG | 1 cut(s) | 648 |
| BshFI | GGCC | 1 cut(s) | 950 |
| BshNI | GGYRCC | 1 cut(s) | 21 |
| BsiSI | CCGG | 1 cut(s) | 25 |
| BsmAI | GTCTC | 2 cut(s) | 529, 950 |
| BsmI | GAATGC | 1 cut(s) | 329 |
| BsnI | GGCC | 1 cut(s) | 950 |
| Bsp143I | GATC | 4 cut(s) | 136, 739, 787, 829 |
| Bsp19I | CCATGG | 2 cut(s) | 798, 951 |
| BspANI | GGCC | 1 cut(s) | 950 |
| BspLI | GGNNCC | 1 cut(s) | 23 |
| BspPI | GGATC | 1 cut(s) | 824 |
| BspT107I | GGYRCC | 1 cut(s) | 21 |
| BsrDI | GCAATG | 1 cut(s) | 860 |
| BsrFI | RCCGGY | 1 cut(s) | 24 |
| BsrI | ACTGG | 1 cut(s) | 856 |
| BssAI | RCCGGY | 1 cut(s) | 24 |
| BssECI | CCNNGG | 2 cut(s) | 798, 951 |
| BssMI | GATC | 4 cut(s) | 136, 739, 787, 829 |
| BssNAI | GTATAC | 1 cut(s) | 252 |
| BssT1I | CCWWGG | 2 cut(s) | 798, 951 |
| Bst1107I | GTATAC | 1 cut(s) | 252 |
| Bst2UI | CCWGG | 1 cut(s) | 350 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 659 |
| BstBAI | YACGTR | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 1 cut(s) | 747 |
| BstDEI | CTNAG | 4 cut(s) | 113, 620, 885, 912 |
| BstDSI | CCRYGG | 2 cut(s) | 798, 951 |
| BstF5I | GGATG | 1 cut(s) | 703 |
| BstKTI | GATC | 4 cut(s) | 139, 742, 790, 832 |
| BstMAI | GTCTC | 2 cut(s) | 529, 950 |
| BstMBI | GATC | 4 cut(s) | 136, 739, 787, 829 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 659 |
| BstNI | CCWGG | 1 cut(s) | 350 |
| BstNSI | RCATGY | 1 cut(s) | 657 |
| BstSCI | CCNGG | 1 cut(s) | 348 |
| BstSNI | TACGTA | 1 cut(s) | 10 |
| BstV1I | GCAGC | 2 cut(s) | 251, 649 |
| BstV2I | GAAGAC | 1 cut(s) | 183 |
| BstZ17I | GTATAC | 1 cut(s) | 252 |
| BsuI | GTATCC | 1 cut(s) | 674 |
| BsuRI | GGCC | 1 cut(s) | 950 |
| BtgI | CCRYGG | 2 cut(s) | 798, 951 |
| BtrI | CACGTC | 1 cut(s) | 488 |
| BtsCI | GGATG | 1 cut(s) | 703 |
| Cac8I | GCNNGC | 1 cut(s) | 747 |
| CaiI | CAGNNNCTG | 1 cut(s) | 611 |
| Cfr10I | RCCGGY | 1 cut(s) | 24 |
| CsiI | ACCWGGT | 1 cut(s) | 348 |
| Csp6I | GTAC | 3 cut(s) | 11, 281, 837 |
| CviAII | CATG | 5 cut(s) | 374, 654, 799, 834, 952 |
| CviJI | RGCY | 4 cut(s) | 611, 624, 745, 950 |
| CviKI_1 | RGCY | 4 cut(s) | 611, 624, 745, 950 |
| CviQI | GTAC | 3 cut(s) | 11, 281, 837 |
| DdeI | CTNAG | 4 cut(s) | 113, 620, 885, 912 |
| DpnI | GATC | 4 cut(s) | 138, 741, 789, 831 |
| DpnII | GATC | 4 cut(s) | 136, 739, 787, 829 |
| DraI | TTTAAA | 1 cut(s) | 705 |
| EaeI | YGGCCR | 1 cut(s) | 948 |
| Eco105I | TACGTA | 1 cut(s) | 10 |
| Eco130I | CCWWGG | 2 cut(s) | 798, 951 |
| Eco57I | CTGAAG | 1 cut(s) | 591 |
| EcoRI | GAATTC | 2 cut(s) | 221, 1021 |
| EcoRII | CCWGG | 1 cut(s) | 348 |
| EcoT14I | CCWWGG | 2 cut(s) | 798, 951 |
| ErhI | CCWWGG | 2 cut(s) | 798, 951 |
| FaeI | CATG | 5 cut(s) | 377, 657, 802, 837, 955 |
| FatI | CATG | 5 cut(s) | 373, 653, 798, 833, 951 |
| FauNDI | CATATG | 1 cut(s) | 627 |
| FbaI | TGATCA | 2 cut(s) | 136, 787 |
| FblI | GTMKAC | 2 cut(s) | 251, 974 |
| Fnu4HI | GCNGC | 2 cut(s) | 240, 663 |
| FokI | GGATG | 1 cut(s) | 710 |
| Fsp4HI | GCNGC | 2 cut(s) | 240, 663 |
| FspBI | CTAG | 1 cut(s) | 807 |
| GluI | GCNGC | 2 cut(s) | 240, 663 |
| HaeIII | GGCC | 1 cut(s) | 950 |
| HapII | CCGG | 1 cut(s) | 25 |
| Hin1II | CATG | 5 cut(s) | 377, 657, 802, 837, 955 |
| HinfI | GANTC | 5 cut(s) | 56, 289, 566, 602, 1039 |
| HpaII | CCGG | 1 cut(s) | 25 |
| HphI | GGTGA | 4 cut(s) | 364, 403, 592, 626 |
| Hpy166II | GTNNAC | 2 cut(s) | 252, 975 |
| Hpy188I | TCNGA | 4 cut(s) | 571, 607, 739, 994 |
| Hpy188III | TCNNGA | 3 cut(s) | 208, 491, 717 |
| Hpy8I | GTNNAC | 2 cut(s) | 252, 975 |
| HpyAV | CCTTC | 2 cut(s) | 678, 963 |
| HpyCH4IV | ACGT | 2 cut(s) | 9, 487 |
| HpyCH4V | TGCA | 3 cut(s) | 52, 239, 665 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 659 |
| HpyF3I | CTNAG | 4 cut(s) | 113, 620, 885, 912 |
| HpySE526I | ACGT | 2 cut(s) | 9, 487 |
| Hsp92II | CATG | 5 cut(s) | 377, 657, 802, 837, 955 |
| Ksp22I | TGATCA | 2 cut(s) | 136, 787 |
| Kzo9I | GATC | 4 cut(s) | 136, 739, 787, 829 |
| LmnI | GCTCC | 1 cut(s) | 989 |
| Lsp1109I | GCAGC | 2 cut(s) | 251, 649 |
| LweI | GCATC | 2 cut(s) | 226, 688 |
| MabI | ACCWGGT | 1 cut(s) | 348 |
| MaeI | CTAG | 1 cut(s) | 807 |
| MaeII | ACGT | 2 cut(s) | 9, 487 |
| MaeIII | GTNAC | 1 cut(s) | 94 |
| MalI | GATC | 4 cut(s) | 138, 741, 789, 831 |
| MboI | GATC | 4 cut(s) | 136, 739, 787, 829 |
| MboII | GAAGA | 9 cut(s) | 188, 326, 406, 515, 584, 611, 843, 913, 1044 |
| MlsI | TGGCCA | 1 cut(s) | 950 |
| MluNI | TGGCCA | 1 cut(s) | 950 |
| MmeI | TCCRAC | 1 cut(s) | 430 |
| MnlI | CCTC | 4 cut(s) | 58, 144, 670, 783 |
| Mox20I | TGGCCA | 1 cut(s) | 950 |
| MroXI | GAANNNNTTC | 1 cut(s) | 73 |
| MscI | TGGCCA | 1 cut(s) | 950 |
| MseI | TTAA | 6 cut(s) | 72, 129, 297, 473, 692, 704 |
| Msp20I | TGGCCA | 1 cut(s) | 950 |
| MspI | CCGG | 1 cut(s) | 25 |
| MspR9I | CCNGG | 1 cut(s) | 350 |
| Mva1269I | GAATGC | 1 cut(s) | 329 |
| MvaI | CCWGG | 1 cut(s) | 350 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 659 |
| NcoI | CCATGG | 2 cut(s) | 798, 951 |
| NdeI | CATATG | 1 cut(s) | 627 |
| NdeII | GATC | 4 cut(s) | 136, 739, 787, 829 |
| NlaIII | CATG | 5 cut(s) | 377, 657, 802, 837, 955 |
| NlaIV | GGNNCC | 1 cut(s) | 23 |
| NspI | RCATGY | 1 cut(s) | 657 |
| PctI | GAATGC | 1 cut(s) | 329 |
| PdmI | GAANNNNTTC | 1 cut(s) | 73 |
| PfeI | GAWTC | 5 cut(s) | 56, 289, 566, 602, 1039 |
| PkrI | GCNGC | 2 cut(s) | 241, 664 |
| Ppu21I | YACGTR | 1 cut(s) | 10 |
| PshBI | ATTAAT | 2 cut(s) | 72, 692 |
| Psp6I | CCWGG | 1 cut(s) | 348 |
| PspGI | CCWGG | 1 cut(s) | 348 |
| PspN4I | GGNNCC | 1 cut(s) | 23 |
| PstNI | CAGNNNCTG | 1 cut(s) | 611 |
| RsaI | GTAC | 3 cut(s) | 12, 282, 838 |
| RsaNI | GTAC | 3 cut(s) | 11, 281, 837 |
| SaqAI | TTAA | 6 cut(s) | 72, 129, 297, 473, 692, 704 |
| SatI | GCNGC | 2 cut(s) | 240, 663 |
| Sau3AI | GATC | 4 cut(s) | 136, 739, 787, 829 |
| ScrFI | CCNGG | 1 cut(s) | 350 |
| SetI | ASST | 8 cut(s) | 12, 282, 312, 351, 490, 613, 670, 974 |
| SexAI | ACCWGGT | 1 cut(s) | 348 |
| SfaNI | GCATC | 2 cut(s) | 226, 688 |
| SnaBI | TACGTA | 1 cut(s) | 10 |
| SpeI | ACTAGT | 1 cut(s) | 806 |
| SspI | AATATT | 2 cut(s) | 690, 844 |
| SspMI | CTAG | 1 cut(s) | 807 |
| StyD4I | CCNGG | 1 cut(s) | 348 |
| StyI | CCWWGG | 2 cut(s) | 798, 951 |
| TaiI | ACGT | 2 cut(s) | 12, 490 |
| TaqI | TCGA | 1 cut(s) | 84 |
| TatI | WGTACW | 1 cut(s) | 836 |
| TfiI | GAWTC | 5 cut(s) | 56, 289, 566, 602, 1039 |
| Tru1I | TTAA | 6 cut(s) | 72, 129, 297, 473, 692, 704 |
| Tru9I | TTAA | 6 cut(s) | 72, 129, 297, 473, 692, 704 |
| TseI | GCWGC | 2 cut(s) | 239, 662 |
| TspDTI | ATGAA | 6 cut(s) | 66, 180, 189, 234, 348, 723 |
| VspI | ATTAAT | 2 cut(s) | 72, 692 |
| XapI | RAATTY | 6 cut(s) | 119, 221, 272, 551, 732, 1021 |
| XceI | RCATGY | 1 cut(s) | 657 |
| XmiI | GTMKAC | 2 cut(s) | 251, 974 |
| XmnI | GAANNNNTTC | 1 cut(s) | 73 |
| XspI | CTAG | 1 cut(s) | 807 |