TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 155 - 384 | 1.2e-06 | Leucine-rich repeat region |
| LRR_EndoS | PF23952 | 163 - 236 | 8.8e-06 | Endo-beta-N-acetylglucosaminidase EndoS LRR domain |
| LRR_13 | PF23286 | 244 - 325 | 1.2e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 441 - 537 | 6.7e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 551 - 625 | 5.1e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 320 |
| Acc16I | TGCGCA | 1 cut(s) | 2426 |
| Acc36I | ACCTGC | 1 cut(s) | 159 |
| Acc65I | GGTACC | 1 cut(s) | 2812 |
| AccB1I | GGYRCC | 2 cut(s) | 2812, 3134 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 485, 3001 |
| AccII | CGCG | 2 cut(s) | 348, 3208 |
| AccIII | TCCGGA | 4 cut(s) | 341, 932, 1423, 1693 |
| AcvI | CACGTG | 1 cut(s) | 3740 |
| AdeI | CACNNNGTG | 2 cut(s) | 485, 3939 |
| AfaI | GTAC | 3 cut(s) | 48, 2814, 3609 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 485, 741, 2648, 2822, 2931, 3001 |
| AflII | CTTAAG | 1 cut(s) | 1577 |
| AflIII | ACRYGT | 2 cut(s) | 346, 3669 |
| AjiI | CACGTC | 2 cut(s) | 29, 1812 |
| AjnI | CCWGG | 9 cut(s) | 154, 1304, 1990, 2965, 3010, 3172, 3282, 3291, 3460 |
| Alw21I | GWGCWC | 5 cut(s) | 429, 695, 1046, 2415, 2914 |
| Alw26I | GTCTC | 7 cut(s) | 218, 1214, 1317, 2159, 2584, 3031, 3697 |
| Alw44I | GTGCAC | 1 cut(s) | 2411 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3028, 3322 |
| Ama87I | CYCGRG | 1 cut(s) | 1121 |
| Aor13HI | TCCGGA | 4 cut(s) | 341, 932, 1423, 1693 |
| AoxI | GGCC | 4 cut(s) | 2702, 3294, 3472, 3728 |
| ApaLI | GTGCAC | 1 cut(s) | 2411 |
| AseI | ATTAAT | 1 cut(s) | 3146 |
| Asp718I | GGTACC | 1 cut(s) | 2812 |
| AspLEI | GCGC | 2 cut(s) | 478, 2427 |
| AspS9I | GGNCC | 6 cut(s) | 1083, 1374, 2266, 3008, 3473, 3729 |
| AsuC2I | CCSGG | 2 cut(s) | 3153, 3569 |
| AsuHPI | GGTGA | 4 cut(s) | 277, 1294, 1628, 3548 |
| AvaI | CYCGRG | 1 cut(s) | 1121 |
| AvaII | GGWCC | 4 cut(s) | 1083, 1374, 2266, 3008 |
| BaeGI | GKGCMC | 2 cut(s) | 2415, 3196 |
| BamHI | GGATCC | 3 cut(s) | 2441, 2521, 3155 |
| BanI | GGYRCC | 2 cut(s) | 2812, 3134 |
| BanII | GRGCYC | 2 cut(s) | 2539, 3568 |
| BbrPI | CACGTG | 1 cut(s) | 3740 |
| Bbv12I | GWGCWC | 5 cut(s) | 429, 695, 1046, 2415, 2914 |
| BbvCI | CCTCAGC | 1 cut(s) | 2672 |
| BceAI | ACGGC | 4 cut(s) | 758, 2717, 2843, 3487 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1102, 1136 |
| BciT130I | CCWGG | 9 cut(s) | 156, 1306, 1992, 2967, 3012, 3174, 3284, 3293, 3462 |
| BciVI | GTATCC | 1 cut(s) | 3684 |
| BclI | TGATCA | 2 cut(s) | 2662, 3772 |
| BcnI | CCSGG | 2 cut(s) | 3153, 3569 |
| BcoDI | GTCTC | 7 cut(s) | 218, 1214, 1317, 2159, 2584, 3031, 3697 |
| BfaI | CTAG | 3 cut(s) | 107, 1784, 2105 |
| BfmI | CTRYAG | 2 cut(s) | 3224, 3326 |
| BfrI | CTTAAG | 1 cut(s) | 1577 |
| BfuAI | ACCTGC | 1 cut(s) | 159 |
| BfuI | GTATCC | 1 cut(s) | 3684 |
| BglII | AGATCT | 1 cut(s) | 1525 |
| BlpI | GCTNAGC | 1 cut(s) | 1586 |
| Bme18I | GGWCC | 4 cut(s) | 1083, 1374, 2266, 3008 |
| BmeT110I | CYCGRG | 1 cut(s) | 1121 |
| BmgBI | CACGTC | 2 cut(s) | 29, 1812 |
| BmgT120I | GGNCC | 6 cut(s) | 1083, 1374, 2266, 3008, 3473, 3729 |
| BmiI | GGNNCC | 8 cut(s) | 1085, 2443, 2523, 2814, 3136, 3157, 3280, 3731 |
| BmrI | ACTGGG | 1 cut(s) | 885 |
| BmsI | GCATC | 8 cut(s) | 84, 187, 688, 1319, 2874, 2971, 3092, 3120 |
| BmuI | ACTGGG | 1 cut(s) | 885 |
| BpmI | CTGGAG | 2 cut(s) | 791, 3033 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2672, 2913 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1586 |
| BpuEI | CTTGAG | 5 cut(s) | 1238, 1486, 1868, 1996, 3721 |
| BpuMI | CCSGG | 2 cut(s) | 3153, 3569 |
| BsaAI | YACGTR | 1 cut(s) | 3740 |
| BsaBI | GATNNNNATC | 2 cut(s) | 730, 2520 |
| BsaI | GGTCTC | 1 cut(s) | 3697 |
| BsaJI | CCNNGG | 5 cut(s) | 1990, 3130, 3282, 3283, 3567 |
| BsaWI | WCCGGW | 4 cut(s) | 341, 932, 1423, 1693 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2840, 2870 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 485, 741, 2648, 2822, 2931, 3001 |
| Bse1I | ACTGG | 5 cut(s) | 880, 1496, 2621, 2827, 3280 |
| Bse3DI | GCAATG | 3 cut(s) | 2002, 2389, 2957 |
| Bse8I | GATNNNNATC | 2 cut(s) | 730, 2520 |
| BseAI | TCCGGA | 4 cut(s) | 341, 932, 1423, 1693 |
| BseBI | CCWGG | 9 cut(s) | 156, 1306, 1992, 2967, 3012, 3174, 3284, 3293, 3462 |
| BseDI | CCNNGG | 5 cut(s) | 1990, 3130, 3282, 3283, 3567 |
| BseJI | GATNNNNATC | 2 cut(s) | 730, 2520 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 485, 741, 2648, 2822, 2931, 3001 |
| BseMI | GCAATG | 3 cut(s) | 2002, 2389, 2957 |
| BseMII | CTCAG | 8 cut(s) | 1119, 2514, 2663, 2747, 2795, 2927, 3692, 3762 |
| BseNI | ACTGG | 5 cut(s) | 880, 1496, 2621, 2827, 3280 |
| BseRI | GAGGAG | 7 cut(s) | 1253, 1865, 2477, 2486, 2525, 3818, 3827 |
| BseSI | GKGCMC | 2 cut(s) | 2415, 3196 |
| BsgI | GTGCAG | 4 cut(s) | 604, 955, 1522, 1820 |
| Bsh1236I | CGCG | 2 cut(s) | 348, 3208 |
| BshFI | GGCC | 4 cut(s) | 2704, 3296, 3474, 3730 |
| BshNI | GGYRCC | 2 cut(s) | 2812, 3134 |
| BsiHKAI | GWGCWC | 5 cut(s) | 429, 695, 1046, 2415, 2914 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1121 |
| BsiSI | CCGG | 6 cut(s) | 342, 933, 1424, 1694, 3152, 3569 |
| BslFI | GGGAC | 6 cut(s) | 843, 905, 1069, 2303, 2376, 2625 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 485, 741, 2648, 2822, 2931, 3001 |
| BsmAI | GTCTC | 7 cut(s) | 218, 1214, 1317, 2159, 2584, 3031, 3697 |
| BsmBI | CGTCTC | 1 cut(s) | 2159 |
| BsmFI | GGGAC | 6 cut(s) | 843, 905, 1069, 2303, 2376, 2625 |
| BsmI | GAATGC | 1 cut(s) | 898 |
| BsnI | GGCC | 4 cut(s) | 2704, 3296, 3474, 3730 |
| Bso31I | GGTCTC | 1 cut(s) | 3697 |
| BsoBI | CYCGRG | 1 cut(s) | 1121 |
| Bsp1286I | GDGCHC | 8 cut(s) | 429, 695, 1046, 2415, 2539, 2914, 3196, 3568 |
| Bsp13I | TCCGGA | 4 cut(s) | 341, 932, 1423, 1693 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1586 |
| Bsp68I | TCGCGA | 1 cut(s) | 3208 |
| BspANI | GGCC | 4 cut(s) | 2704, 3296, 3474, 3730 |
| BspCNI | CTCAG | 8 cut(s) | 1118, 2513, 2664, 2746, 2794, 2926, 3691, 3761 |
| BspEI | TCCGGA | 4 cut(s) | 341, 932, 1423, 1693 |
| BspFNI | CGCG | 2 cut(s) | 348, 3208 |
| BspHI | TCATGA | 1 cut(s) | 181 |
| BspLI | GGNNCC | 8 cut(s) | 1085, 2443, 2523, 2814, 3136, 3157, 3280, 3731 |
| BspMI | ACCTGC | 1 cut(s) | 159 |
| BspT107I | GGYRCC | 2 cut(s) | 2812, 3134 |
| BspTI | CTTAAG | 1 cut(s) | 1577 |
| BspTNI | GGTCTC | 1 cut(s) | 3697 |
| BsrDI | GCAATG | 3 cut(s) | 2002, 2389, 2957 |
| BsrI | ACTGG | 5 cut(s) | 880, 1496, 2621, 2827, 3280 |
| BssECI | CCNNGG | 5 cut(s) | 1990, 3130, 3282, 3283, 3567 |
| BssT1I | CCWWGG | 1 cut(s) | 3130 |
| Bst2UI | CCWGG | 9 cut(s) | 156, 1306, 1992, 2967, 3012, 3174, 3284, 3293, 3462 |
| Bst6I | CTCTTC | 4 cut(s) | 3075, 3372, 3719, 3804 |
| BstAFI | CTTAAG | 1 cut(s) | 1577 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 103, 2884 |
| BstBAI | YACGTR | 1 cut(s) | 3740 |
| BstC8I | GCNNGC | 9 cut(s) | 161, 882, 1592, 2316, 2411, 2706, 2835, 3254, 3788 |
| BstEII | GGTNACC | 1 cut(s) | 3287 |
| BstFNI | CGCG | 2 cut(s) | 348, 3208 |
| BstHHI | GCGC | 2 cut(s) | 478, 2427 |
| BstMAI | GTCTC | 7 cut(s) | 218, 1214, 1317, 2159, 2584, 3031, 3697 |
| BstNI | CCWGG | 9 cut(s) | 156, 1306, 1992, 2967, 3012, 3174, 3284, 3293, 3462 |
| BstNSI | RCATGY | 1 cut(s) | 3673 |
| BstPI | GGTNACC | 1 cut(s) | 3287 |
| BstSFI | CTRYAG | 2 cut(s) | 3224, 3326 |
| BstSLI | GKGCMC | 2 cut(s) | 2415, 3196 |
| BstUI | CGCG | 2 cut(s) | 348, 3208 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1515, 2438 |
| BsuI | GTATCC | 1 cut(s) | 3684 |
| BsuRI | GGCC | 4 cut(s) | 2704, 3296, 3474, 3730 |
| BtrI | CACGTC | 2 cut(s) | 29, 1812 |
| BtsI | GCAGTG | 2 cut(s) | 2128, 2413 |
| BtsIMutI | CAGTG | 7 cut(s) | 147, 490, 2128, 2413, 2443, 2767, 2925 |
| BtuMI | TCGCGA | 1 cut(s) | 3208 |
| BveI | ACCTGC | 1 cut(s) | 159 |
| Cac8I | GCNNGC | 9 cut(s) | 161, 882, 1592, 2316, 2411, 2706, 2835, 3254, 3788 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3028, 3322 |
| CciI | TCATGA | 1 cut(s) | 181 |
| CfoI | GCGC | 2 cut(s) | 478, 2427 |
| Cfr13I | GGNCC | 6 cut(s) | 1083, 1374, 2266, 3008, 3473, 3729 |
| CseI | GACGC | 7 cut(s) | 25, 354, 1019, 1489, 1582, 1852, 2627 |
| CsiI | ACCWGGT | 1 cut(s) | 3172 |
| Csp6I | GTAC | 3 cut(s) | 47, 2813, 3608 |
| CviAII | CATG | 6 cut(s) | 182, 572, 2285, 2306, 3160, 3670 |
| CviQI | GTAC | 3 cut(s) | 47, 2813, 3608 |
| DraI | TTTAAA | 1 cut(s) | 3919 |
| DraIII | CACNNNGTG | 2 cut(s) | 485, 3939 |
| Eam1104I | CTCTTC | 4 cut(s) | 3075, 3372, 3719, 3804 |
| EarI | CTCTTC | 4 cut(s) | 3075, 3372, 3719, 3804 |
| EciI | GGCGGA | 1 cut(s) | 1959 |
| Eco130I | CCWWGG | 1 cut(s) | 3130 |
| Eco147I | AGGCCT | 1 cut(s) | 3296 |
| Eco24I | GRGCYC | 2 cut(s) | 2539, 3568 |
| Eco31I | GGTCTC | 1 cut(s) | 3697 |
| Eco32I | GATATC | 2 cut(s) | 3684, 3754 |
| Eco47I | GGWCC | 4 cut(s) | 1083, 1374, 2266, 3008 |
| Eco72I | CACGTG | 1 cut(s) | 3740 |
| Eco88I | CYCGRG | 1 cut(s) | 1121 |
| Eco91I | GGTNACC | 1 cut(s) | 3287 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1083, 3729 |
| EcoO65I | GGTNACC | 1 cut(s) | 3287 |
| EcoRI | GAATTC | 2 cut(s) | 3052, 3626 |
| EcoRII | CCWGG | 9 cut(s) | 154, 1304, 1990, 2965, 3010, 3172, 3282, 3291, 3460 |
| EcoRV | GATATC | 2 cut(s) | 3684, 3754 |
| EcoT14I | CCWWGG | 1 cut(s) | 3130 |
| EcoT22I | ATGCAT | 3 cut(s) | 99, 573, 898 |
| EcoT38I | GRGCYC | 2 cut(s) | 2539, 3568 |
| ErhI | CCWWGG | 1 cut(s) | 3130 |
| Esp3I | CGTCTC | 1 cut(s) | 2159 |
| FaeI | CATG | 6 cut(s) | 185, 575, 2288, 2309, 3163, 3673 |
| FaqI | GGGAC | 6 cut(s) | 843, 905, 1069, 2303, 2376, 2625 |
| FatI | CATG | 6 cut(s) | 181, 571, 2284, 2305, 3159, 3669 |
| FauI | CCCGC | 2 cut(s) | 3341, 3479 |
| FbaI | TGATCA | 2 cut(s) | 2662, 3772 |
| FriOI | GRGCYC | 2 cut(s) | 2539, 3568 |
| FspBI | CTAG | 3 cut(s) | 107, 1784, 2105 |
| FspI | TGCGCA | 1 cut(s) | 2426 |
| GlaI | GCGC | 2 cut(s) | 477, 2426 |
| GsuI | CTGGAG | 2 cut(s) | 791, 3033 |
| HaeIII | GGCC | 4 cut(s) | 2704, 3296, 3474, 3730 |
| HapII | CCGG | 6 cut(s) | 342, 933, 1424, 1694, 3152, 3569 |
| HgaI | GACGC | 7 cut(s) | 25, 354, 1019, 1489, 1582, 1852, 2627 |
| HhaI | GCGC | 2 cut(s) | 478, 2427 |
| Hin1II | CATG | 6 cut(s) | 185, 575, 2288, 2309, 3163, 3673 |
| Hin6I | GCGC | 2 cut(s) | 476, 2425 |
| HinP1I | GCGC | 2 cut(s) | 476, 2425 |
| HincII | GTYRAC | 3 cut(s) | 1447, 1717, 1725 |
| HindII | GTYRAC | 3 cut(s) | 1447, 1717, 1725 |
| HindIII | AAGCTT | 4 cut(s) | 286, 524, 698, 1049 |
| HpaII | CCGG | 6 cut(s) | 342, 933, 1424, 1694, 3152, 3569 |
| HphI | GGTGA | 4 cut(s) | 277, 1294, 1628, 3548 |
| Hpy166II | GTNNAC | 7 cut(s) | 133, 392, 1377, 1447, 1717, 1725, 2413 |
| Hpy8I | GTNNAC | 7 cut(s) | 133, 392, 1377, 1447, 1717, 1725, 2413 |
| Hpy99I | CGWCG | 3 cut(s) | 1576, 1846, 3761 |
| HpyCH4IV | ACGT | 4 cut(s) | 28, 1811, 2168, 3739 |
| HpySE526I | ACGT | 4 cut(s) | 28, 1811, 2168, 3739 |
| Hsp92II | CATG | 6 cut(s) | 185, 575, 2288, 2309, 3163, 3673 |
| HspAI | GCGC | 2 cut(s) | 476, 2425 |
| Kpn2I | TCCGGA | 4 cut(s) | 341, 932, 1423, 1693 |
| KpnI | GGTACC | 1 cut(s) | 2816 |
| Ksp22I | TGATCA | 2 cut(s) | 2662, 3772 |
| LmnI | GCTCC | 9 cut(s) | 165, 1582, 1852, 2473, 2896, 3014, 3284, 3484, 3814 |
| LweI | GCATC | 8 cut(s) | 84, 187, 688, 1319, 2874, 2971, 3092, 3120 |
| MabI | ACCWGGT | 1 cut(s) | 3172 |
| MaeI | CTAG | 3 cut(s) | 107, 1784, 2105 |
| MaeII | ACGT | 4 cut(s) | 28, 1811, 2168, 3739 |
| MaeIII | GTNAC | 7 cut(s) | 965, 1595, 1865, 3234, 3287, 3467, 3542 |
| MfeI | CAATTG | 2 cut(s) | 861, 1197 |
| MhlI | GDGCHC | 8 cut(s) | 429, 695, 1046, 2415, 2539, 2914, 3196, 3568 |
| MluI | ACGCGT | 1 cut(s) | 346 |
| MlyI | GAGTC | 2 cut(s) | 1720, 2492 |
| Mph1103I | ATGCAT | 3 cut(s) | 99, 573, 898 |
| MroI | TCCGGA | 4 cut(s) | 341, 932, 1423, 1693 |
| MslI | CAYNNNNRTG | 3 cut(s) | 186, 242, 3738 |
| MspA1I | CMGCKG | 4 cut(s) | 2695, 3232, 3348, 3434 |
| MspCI | CTTAAG | 1 cut(s) | 1577 |
| MspI | CCGG | 6 cut(s) | 342, 933, 1424, 1694, 3152, 3569 |
| MunI | CAATTG | 2 cut(s) | 861, 1197 |
| Mva1269I | GAATGC | 1 cut(s) | 898 |
| MvaI | CCWGG | 9 cut(s) | 156, 1306, 1992, 2967, 3012, 3174, 3284, 3293, 3462 |
| MvnI | CGCG | 2 cut(s) | 348, 3208 |
| NciI | CCSGG | 2 cut(s) | 3153, 3569 |
| NlaIII | CATG | 6 cut(s) | 185, 575, 2288, 2309, 3163, 3673 |
| NlaIV | GGNNCC | 8 cut(s) | 1085, 2443, 2523, 2814, 3136, 3157, 3280, 3731 |
| NmuCI | GTSAC | 2 cut(s) | 3234, 3467 |
| NruI | TCGCGA | 1 cut(s) | 3208 |
| NsbI | TGCGCA | 1 cut(s) | 2426 |
| NsiI | ATGCAT | 3 cut(s) | 99, 573, 898 |
| NspI | RCATGY | 1 cut(s) | 3673 |
| PaeR7I | CTCGAG | 1 cut(s) | 1121 |
| PagI | TCATGA | 1 cut(s) | 181 |
| PasI | CCCWGGG | 1 cut(s) | 3283 |
| PceI | AGGCCT | 1 cut(s) | 3296 |
| PciI | ACATGT | 1 cut(s) | 3669 |
| PctI | GAATGC | 1 cut(s) | 898 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 485, 3001 |
| PfoI | TCCNGGA | 2 cut(s) | 2965, 3010 |
| PleI | GAGTC | 2 cut(s) | 1720, 2492 |
| PmaCI | CACGTG | 1 cut(s) | 3740 |
| PmlI | CACGTG | 1 cut(s) | 3740 |
| PpsI | GAGTC | 2 cut(s) | 1720, 2492 |
| Ppu21I | YACGTR | 1 cut(s) | 3740 |
| PpuMI | RGGWCCY | 1 cut(s) | 1083 |
| PscI | ACATGT | 1 cut(s) | 3669 |
| PshBI | ATTAAT | 1 cut(s) | 3146 |
| PsiI | TTATAA | 1 cut(s) | 320 |
| Psp5II | RGGWCCY | 1 cut(s) | 1083 |
| Psp6I | CCWGG | 9 cut(s) | 154, 1304, 1990, 2965, 3010, 3172, 3282, 3291, 3460 |
| PspCI | CACGTG | 1 cut(s) | 3740 |
| PspEI | GGTNACC | 1 cut(s) | 3287 |
| PspGI | CCWGG | 9 cut(s) | 154, 1304, 1990, 2965, 3010, 3172, 3282, 3291, 3460 |
| PspN4I | GGNNCC | 8 cut(s) | 1085, 2443, 2523, 2814, 3136, 3157, 3280, 3731 |
| PspPI | GGNCC | 6 cut(s) | 1083, 1374, 2266, 3008, 3473, 3729 |
| PspPPI | RGGWCCY | 1 cut(s) | 1083 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3028, 3322 |
| RruI | TCGCGA | 1 cut(s) | 3208 |
| RsaI | GTAC | 3 cut(s) | 48, 2814, 3609 |
| RsaNI | GTAC | 3 cut(s) | 47, 2813, 3608 |
| RseI | CAYNNNNRTG | 3 cut(s) | 186, 242, 3738 |
| Sau96I | GGNCC | 6 cut(s) | 1083, 1374, 2266, 3008, 3473, 3729 |
| SchI | GAGTC | 2 cut(s) | 1720, 2492 |
| SduI | GDGCHC | 8 cut(s) | 429, 695, 1046, 2415, 2539, 2914, 3196, 3568 |
| SexAI | ACCWGGT | 1 cut(s) | 3172 |
| SfaNI | GCATC | 8 cut(s) | 84, 187, 688, 1319, 2874, 2971, 3092, 3120 |
| SfcI | CTRYAG | 2 cut(s) | 3224, 3326 |
| Sfr274I | CTCGAG | 1 cut(s) | 1121 |
| SinI | GGWCC | 4 cut(s) | 1083, 1374, 2266, 3008 |
| SlaI | CTCGAG | 1 cut(s) | 1121 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 186, 242, 3738 |
| SmlI | CTYRAG | 7 cut(s) | 1121, 1217, 1465, 1577, 1847, 1975, 3700 |
| SmoI | CTYRAG | 7 cut(s) | 1121, 1217, 1465, 1577, 1847, 1975, 3700 |
| SseBI | AGGCCT | 1 cut(s) | 3296 |
| SspI | AATATT | 2 cut(s) | 460, 2681 |
| SspMI | CTAG | 3 cut(s) | 107, 1784, 2105 |
| StuI | AGGCCT | 1 cut(s) | 3296 |
| StyI | CCWWGG | 1 cut(s) | 3130 |
| TaiI | ACGT | 4 cut(s) | 31, 1814, 2171, 3742 |
| TaqI | TCGA | 9 cut(s) | 633, 660, 984, 1011, 1079, 1122, 1400, 1756, 3759 |
| TaqII | GACCGA | 1 cut(s) | 2996 |
| TatI | WGTACW | 1 cut(s) | 46 |
| TauI | GCSGC | 5 cut(s) | 2409, 2698, 3140, 3143, 3437 |
| TscAI | CASTG | 7 cut(s) | 154, 490, 2128, 2420, 2443, 2767, 2932 |
| TseFI | GTSAC | 2 cut(s) | 3234, 3467 |
| Tsp45I | GTSAC | 2 cut(s) | 3234, 3467 |
| TspGWI | ACGGA | 3 cut(s) | 547, 2249, 2265 |
| TspRI | CASTG | 7 cut(s) | 154, 490, 2128, 2420, 2443, 2767, 2932 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 485, 3001 |
| Vha464I | CTTAAG | 1 cut(s) | 1577 |
| VneI | GTGCAC | 1 cut(s) | 2411 |
| VpaK11BI | GGWCC | 4 cut(s) | 1083, 1374, 2266, 3008 |
| VspI | ATTAAT | 1 cut(s) | 3146 |
| XceI | RCATGY | 1 cut(s) | 3673 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1512 |
| XhoI | CTCGAG | 1 cut(s) | 1121 |
| XspI | CTAG | 3 cut(s) | 107, 1784, 2105 |
| Zsp2I | ATGCAT | 3 cut(s) | 99, 573, 898 |