TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 903, 1497, 1646, 1910, 2096 |
| AatII | GACGTC | 1 cut(s) | 258 |
| AccB1I | GGYRCC | 1 cut(s) | 218 |
| AccI | GTMKAC | 2 cut(s) | 1353, 3371 |
| AccII | CGCG | 3 cut(s) | 286, 1924, 3135 |
| AccIII | TCCGGA | 1 cut(s) | 668 |
| AciI | CCGC | 3 cut(s) | 1514, 2658, 3480 |
| AclWI | GGATC | 5 cut(s) | 475, 2388, 2655, 2668, 3135 |
| AcuI | CTGAAG | 1 cut(s) | 2595 |
| AcyI | GRCGYC | 1 cut(s) | 255 |
| AfaI | GTAC | 6 cut(s) | 311, 552, 773, 1626, 2182, 2948 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 974, 2155, 2210, 3086, 3225, 3255 |
| AflII | CTTAAG | 1 cut(s) | 359 |
| AjnI | CCWGG | 2 cut(s) | 3079, 3502 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 446, 478, 1141, 1173 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 822, 854 |
| Alw21I | GWGCWC | 1 cut(s) | 2109 |
| Alw26I | GTCTC | 7 cut(s) | 795, 2384, 2444, 2510, 2931, 2959, 3054 |
| AlwI | GGATC | 5 cut(s) | 475, 2388, 2655, 2668, 3135 |
| Ama87I | CYCGRG | 1 cut(s) | 2441 |
| Aor13HI | TCCGGA | 1 cut(s) | 668 |
| AoxI | GGCC | 4 cut(s) | 52, 384, 518, 1976 |
| ApeKI | GCWGC | 9 cut(s) | 146, 161, 656, 1173, 1665, 2049, 2052, 2490, 3477 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2923, 2955 |
| AseI | ATTAAT | 1 cut(s) | 2769 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1710 |
| AspLEI | GCGC | 3 cut(s) | 48, 1924, 1926 |
| AspS9I | GGNCC | 4 cut(s) | 53, 339, 385, 1126 |
| AsuC2I | CCSGG | 1 cut(s) | 1737 |
| AsuHPI | GGTGA | 9 cut(s) | 91, 372, 547, 1033, 1048, 1528, 1716, 1837, 3424 |
| AsuII | TTCGAA | 2 cut(s) | 452, 2986 |
| AvaI | CYCGRG | 1 cut(s) | 2441 |
| AvaII | GGWCC | 2 cut(s) | 339, 1126 |
| BaeGI | GKGCMC | 1 cut(s) | 863 |
| BamHI | GGATCC | 1 cut(s) | 2660 |
| BanI | GGYRCC | 1 cut(s) | 218 |
| BanII | GRGCYC | 1 cut(s) | 1737 |
| BauI | CACGAG | 2 cut(s) | 792, 1628 |
| BbsI | GAAGAC | 4 cut(s) | 83, 250, 1361, 2747 |
| Bbv12I | GWGCWC | 1 cut(s) | 2109 |
| BbvI | GCAGC | 9 cut(s) | 158, 173, 668, 1185, 1652, 2039, 2061, 2502, 3464 |
| BceAI | ACGGC | 2 cut(s) | 569, 952 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 425, 459 |
| BciT130I | CCWGG | 2 cut(s) | 3081, 3504 |
| BciVI | GTATCC | 1 cut(s) | 3312 |
| BclI | TGATCA | 3 cut(s) | 196, 301, 1420 |
| BcnI | CCSGG | 1 cut(s) | 1737 |
| BcoDI | GTCTC | 7 cut(s) | 795, 2384, 2444, 2510, 2931, 2959, 3054 |
| BfaI | CTAG | 9 cut(s) | 941, 1016, 1505, 1559, 1586, 2513, 2643, 2721, 3491 |
| BfmI | CTRYAG | 1 cut(s) | 2254 |
| BfrI | CTTAAG | 1 cut(s) | 359 |
| BfuI | GTATCC | 1 cut(s) | 3312 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1840 |
| BglII | AGATCT | 1 cut(s) | 2833 |
| BisI | GCNGC | 9 cut(s) | 147, 162, 657, 1174, 1666, 2050, 2053, 2491, 3478 |
| BlsI | GCNGC | 9 cut(s) | 148, 163, 658, 1175, 1667, 2051, 2054, 2492, 3479 |
| BmcAI | AGTACT | 1 cut(s) | 1626 |
| Bme1390I | CCNGG | 3 cut(s) | 1737, 3081, 3504 |
| Bme18I | GGWCC | 2 cut(s) | 339, 1126 |
| BmeT110I | CYCGRG | 1 cut(s) | 2441 |
| BmgT120I | GGNCC | 4 cut(s) | 53, 339, 385, 1126 |
| BmiI | GGNNCC | 3 cut(s) | 220, 1967, 2662 |
| BmrFI | CCNGG | 3 cut(s) | 1737, 3081, 3504 |
| BmrI | ACTGGG | 1 cut(s) | 770 |
| BmsI | GCATC | 8 cut(s) | 455, 565, 1501, 1665, 2240, 2851, 3261, 3405 |
| BmuI | ACTGGG | 1 cut(s) | 770 |
| BpiI | GAAGAC | 4 cut(s) | 83, 250, 1361, 2747 |
| BpmI | CTGGAG | 3 cut(s) | 1953, 2163, 2321 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1970 |
| Bpu14I | TTCGAA | 2 cut(s) | 452, 2986 |
| BpuEI | CTTGAG | 3 cut(s) | 506, 1865, 2351 |
| BpuMI | CCSGG | 1 cut(s) | 1737 |
| BsaBI | GATNNNNATC | 2 cut(s) | 419, 1116 |
| BsaHI | GRCGYC | 1 cut(s) | 255 |
| BsaJI | CCNNGG | 1 cut(s) | 14 |
| BsaWI | WCCGGW | 2 cut(s) | 668, 2459 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 628, 658, 966, 996, 2956, 2986 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 974, 2155, 2210, 3086, 3225, 3255 |
| Bse118I | RCCGGY | 1 cut(s) | 382 |
| Bse1I | ACTGG | 5 cut(s) | 55, 776, 868, 1284, 2070 |
| Bse3DI | GCAATG | 2 cut(s) | 2676, 2846 |
| Bse8I | GATNNNNATC | 2 cut(s) | 419, 1116 |
| BseAI | TCCGGA | 1 cut(s) | 668 |
| BseBI | CCWGG | 2 cut(s) | 3081, 3504 |
| BseDI | CCNNGG | 1 cut(s) | 14 |
| BseGI | GGATG | 8 cut(s) | 472, 553, 677, 1680, 1774, 2200, 2255, 2468 |
| BseJI | GATNNNNATC | 2 cut(s) | 419, 1116 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 974, 2155, 2210, 3086, 3225, 3255 |
| BseMI | GCAATG | 2 cut(s) | 2676, 2846 |
| BseMII | CTCAG | 4 cut(s) | 254, 406, 999, 1722 |
| BseNI | ACTGG | 5 cut(s) | 55, 776, 868, 1284, 2070 |
| BsePI | GCGCGC | 1 cut(s) | 1922 |
| BseRI | GAGGAG | 1 cut(s) | 652 |
| BseSI | GKGCMC | 1 cut(s) | 863 |
| BseXI | GCAGC | 9 cut(s) | 158, 173, 668, 1185, 1652, 2039, 2061, 2502, 3464 |
| BseYI | CCCAGC | 3 cut(s) | 186, 1838, 3248 |
| BsgI | GTGCAG | 1 cut(s) | 2610 |
| Bsh1236I | CGCG | 3 cut(s) | 286, 1924, 3135 |
| Bsh1285I | CGRYCG | 1 cut(s) | 402 |
| BshFI | GGCC | 4 cut(s) | 54, 386, 520, 1978 |
| BshNI | GGYRCC | 1 cut(s) | 218 |
| BsiEI | CGRYCG | 1 cut(s) | 402 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2109 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2441 |
| BsiSI | CCGG | 5 cut(s) | 216, 383, 669, 1737, 2460 |
| BslFI | GGGAC | 2 cut(s) | 2132, 3335 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 974, 2155, 2210, 3086, 3225, 3255 |
| BsmAI | GTCTC | 7 cut(s) | 795, 2384, 2444, 2510, 2931, 2959, 3054 |
| BsmBI | CGTCTC | 1 cut(s) | 2444 |
| BsmFI | GGGAC | 2 cut(s) | 2132, 3335 |
| BsmI | GAATGC | 3 cut(s) | 602, 1873, 3307 |
| BsnI | GGCC | 4 cut(s) | 54, 386, 520, 1978 |
| BsoBI | CYCGRG | 1 cut(s) | 2441 |
| Bsp119I | TTCGAA | 2 cut(s) | 452, 2986 |
| Bsp1286I | GDGCHC | 3 cut(s) | 863, 1737, 2109 |
| Bsp13I | TCCGGA | 1 cut(s) | 668 |
| Bsp1407I | TGTACA | 2 cut(s) | 309, 2180 |
| Bsp19I | CCATGG | 1 cut(s) | 14 |
| Bsp68I | TCGCGA | 1 cut(s) | 3135 |
| BspACI | CCGC | 3 cut(s) | 1514, 2658, 3480 |
| BspANI | GGCC | 4 cut(s) | 54, 386, 520, 1978 |
| BspCNI | CTCAG | 4 cut(s) | 255, 405, 1000, 1723 |
| BspEI | TCCGGA | 1 cut(s) | 668 |
| BspFNI | CGCG | 3 cut(s) | 286, 1924, 3135 |
| BspHI | TCATGA | 1 cut(s) | 1762 |
| BspLI | GGNNCC | 3 cut(s) | 220, 1967, 2662 |
| BspPI | GGATC | 5 cut(s) | 475, 2388, 2655, 2668, 3135 |
| BspQI | GCTCTTC | 1 cut(s) | 1283 |
| BspT104I | TTCGAA | 2 cut(s) | 452, 2986 |
| BspT107I | GGYRCC | 1 cut(s) | 218 |
| BspTI | CTTAAG | 1 cut(s) | 359 |
| BsrDI | GCAATG | 2 cut(s) | 2676, 2846 |
| BsrFI | RCCGGY | 1 cut(s) | 382 |
| BsrGI | TGTACA | 2 cut(s) | 309, 2180 |
| BsrI | ACTGG | 5 cut(s) | 55, 776, 868, 1284, 2070 |
| BssAI | RCCGGY | 1 cut(s) | 382 |
| BssECI | CCNNGG | 1 cut(s) | 14 |
| BssHII | GCGCGC | 1 cut(s) | 1922 |
| BssNI | GRCGYC | 1 cut(s) | 255 |
| BssSI | CACGAG | 2 cut(s) | 792, 1628 |
| BssT1I | CCWWGG | 1 cut(s) | 14 |
| Bst2BI | CACGAG | 2 cut(s) | 792, 1628 |
| Bst2UI | CCWGG | 2 cut(s) | 3081, 3504 |
| Bst4CI | ACNGT | 3 cut(s) | 314, 1367, 2318 |
| Bst6I | CTCTTC | 5 cut(s) | 399, 1283, 1447, 2613, 3035 |
| BstACI | GRCGYC | 1 cut(s) | 255 |
| BstAFI | CTTAAG | 1 cut(s) | 359 |
| BstAUI | TGTACA | 2 cut(s) | 309, 2180 |
| BstBI | TTCGAA | 2 cut(s) | 452, 2986 |
| BstC8I | GCNNGC | 6 cut(s) | 144, 1836, 1924, 1976, 2004, 3382 |
| BstDSI | CCRYGG | 1 cut(s) | 14 |
| BstEII | GGTNACC | 1 cut(s) | 1036 |
| BstF5I | GGATG | 8 cut(s) | 472, 553, 677, 1680, 1774, 2200, 2255, 2468 |
| BstFNI | CGCG | 3 cut(s) | 286, 1924, 3135 |
| BstHHI | GCGC | 3 cut(s) | 48, 1924, 1926 |
| BstMAI | GTCTC | 7 cut(s) | 795, 2384, 2444, 2510, 2931, 2959, 3054 |
| BstMCI | CGRYCG | 1 cut(s) | 402 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 170, 1337, 1840 |
| BstNI | CCWGG | 2 cut(s) | 3081, 3504 |
| BstPI | GGTNACC | 1 cut(s) | 1036 |
| BstSCI | CCNGG | 3 cut(s) | 1735, 3079, 3502 |
| BstSFI | CTRYAG | 1 cut(s) | 2254 |
| BstSLI | GKGCMC | 1 cut(s) | 863 |
| BstUI | CGCG | 3 cut(s) | 286, 1924, 3135 |
| BstV1I | GCAGC | 9 cut(s) | 158, 173, 668, 1185, 1652, 2039, 2061, 2502, 3464 |
| BstV2I | GAAGAC | 4 cut(s) | 83, 250, 1361, 2747 |
| BstX2I | RGATCY | 5 cut(s) | 480, 2380, 2660, 2833, 3127 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2911 |
| BstYI | RGATCY | 5 cut(s) | 480, 2380, 2660, 2833, 3127 |
| BsuI | GTATCC | 1 cut(s) | 3312 |
| BsuRI | GGCC | 4 cut(s) | 54, 386, 520, 1978 |
| BtgI | CCRYGG | 1 cut(s) | 14 |
| BtgZI | GCGATG | 1 cut(s) | 895 |
| BtsCI | GGATG | 8 cut(s) | 472, 553, 677, 1680, 1774, 2200, 2255, 2468 |
| BtsI | GCAGTG | 1 cut(s) | 123 |
| BtsIMutI | CAGTG | 4 cut(s) | 48, 123, 861, 3294 |
| BtuMI | TCGCGA | 1 cut(s) | 3135 |
| Cac8I | GCNNGC | 6 cut(s) | 144, 1836, 1924, 1976, 2004, 3382 |
| CciI | TCATGA | 1 cut(s) | 1762 |
| CfoI | GCGC | 3 cut(s) | 48, 1924, 1926 |
| Cfr10I | RCCGGY | 1 cut(s) | 382 |
| Cfr13I | GGNCC | 4 cut(s) | 53, 339, 385, 1126 |
| Csp6I | GTAC | 6 cut(s) | 310, 551, 772, 1625, 2181, 2947 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2829, 2864 |
| CviQI | GTAC | 6 cut(s) | 310, 551, 772, 1625, 2181, 2947 |
| Eam1104I | CTCTTC | 5 cut(s) | 399, 1283, 1447, 2613, 3035 |
| EarI | CTCTTC | 5 cut(s) | 399, 1283, 1447, 2613, 3035 |
| EciI | GGCGGA | 1 cut(s) | 2673 |
| Eco130I | CCWWGG | 1 cut(s) | 14 |
| Eco24I | GRGCYC | 1 cut(s) | 1737 |
| Eco47I | GGWCC | 2 cut(s) | 339, 1126 |
| Eco57I | CTGAAG | 1 cut(s) | 2595 |
| Eco88I | CYCGRG | 1 cut(s) | 2441 |
| Eco91I | GGTNACC | 1 cut(s) | 1036 |
| EcoO109I | RGGNCCY | 1 cut(s) | 339 |
| EcoO65I | GGTNACC | 1 cut(s) | 1036 |
| EcoRI | GAATTC | 3 cut(s) | 1291, 2075, 3090 |
| EcoRII | CCWGG | 2 cut(s) | 3079, 3502 |
| EcoT14I | CCWWGG | 1 cut(s) | 14 |
| EcoT22I | ATGCAT | 5 cut(s) | 448, 1438, 1680, 2768, 3309 |
| EcoT38I | GRGCYC | 1 cut(s) | 1737 |
| ErhI | CCWWGG | 1 cut(s) | 14 |
| Esp3I | CGTCTC | 1 cut(s) | 2444 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 446, 478, 1082, 1114 |
| FaqI | GGGAC | 2 cut(s) | 2132, 3335 |
| FauNDI | CATATG | 2 cut(s) | 918, 3346 |
| FbaI | TGATCA | 3 cut(s) | 196, 301, 1420 |
| FblI | GTMKAC | 2 cut(s) | 1353, 3371 |
| Fnu4HI | GCNGC | 9 cut(s) | 147, 162, 657, 1174, 1666, 2050, 2053, 2491, 3478 |
| FokI | GGATG | 8 cut(s) | 479, 560, 684, 1687, 1781, 2187, 2262, 2475 |
| FriOI | GRGCYC | 1 cut(s) | 1737 |
| Fsp4HI | GCNGC | 9 cut(s) | 147, 162, 657, 1174, 1666, 2050, 2053, 2491, 3478 |
| FspBI | CTAG | 9 cut(s) | 941, 1016, 1505, 1559, 1586, 2513, 2643, 2721, 3491 |
| GlaI | GCGC | 3 cut(s) | 47, 1923, 1925 |
| GluI | GCNGC | 9 cut(s) | 147, 162, 657, 1174, 1666, 2050, 2053, 2491, 3478 |
| GsaI | CCCAGC | 3 cut(s) | 190, 1842, 3252 |
| GsuI | CTGGAG | 3 cut(s) | 1953, 2163, 2321 |
| HaeIII | GGCC | 4 cut(s) | 54, 386, 520, 1978 |
| HapII | CCGG | 5 cut(s) | 216, 383, 669, 1737, 2460 |
| HhaI | GCGC | 3 cut(s) | 48, 1924, 1926 |
| Hin1I | GRCGYC | 1 cut(s) | 255 |
| Hin6I | GCGC | 3 cut(s) | 46, 1922, 1924 |
| HinP1I | GCGC | 3 cut(s) | 46, 1922, 1924 |
| HincII | GTYRAC | 4 cut(s) | 1048, 2284, 2782, 3372 |
| HindII | GTYRAC | 4 cut(s) | 1048, 2284, 2782, 3372 |
| HindIII | AAGCTT | 4 cut(s) | 812, 1091, 1876, 2225 |
| HpaII | CCGG | 5 cut(s) | 216, 383, 669, 1737, 2460 |
| HphI | GGTGA | 9 cut(s) | 91, 372, 547, 1033, 1048, 1528, 1716, 1837, 3424 |
| Hpy166II | GTNNAC | 9 cut(s) | 208, 1048, 1354, 1397, 1774, 2284, 2782, 3372, 3487 |
| Hpy8I | GTNNAC | 9 cut(s) | 208, 1048, 1354, 1397, 1774, 2284, 2782, 3372, 3487 |
| Hpy99I | CGWCG | 2 cut(s) | 257, 547 |
| HpyCH4III | ACNGT | 3 cut(s) | 314, 1367, 2318 |
| HpyCH4IV | ACGT | 6 cut(s) | 231, 255, 822, 1524, 1744, 2917 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 170, 1337, 1840 |
| HpySE526I | ACGT | 6 cut(s) | 231, 255, 822, 1524, 1744, 2917 |
| Hsp92I | GRCGYC | 1 cut(s) | 255 |
| HspAI | GCGC | 3 cut(s) | 46, 1922, 1924 |
| Kpn2I | TCCGGA | 1 cut(s) | 668 |
| Ksp22I | TGATCA | 3 cut(s) | 196, 301, 1420 |
| LguI | GCTCTTC | 1 cut(s) | 1283 |
| LmnI | GCTCC | 4 cut(s) | 178, 505, 1971, 2104 |
| Lsp1109I | GCAGC | 9 cut(s) | 158, 173, 668, 1185, 1652, 2039, 2061, 2502, 3464 |
| LweI | GCATC | 8 cut(s) | 455, 565, 1501, 1665, 2240, 2851, 3261, 3405 |
| MaeI | CTAG | 9 cut(s) | 941, 1016, 1505, 1559, 1586, 2513, 2643, 2721, 3491 |
| MaeII | ACGT | 6 cut(s) | 231, 255, 822, 1524, 1744, 2917 |
| MaeIII | GTNAC | 7 cut(s) | 1036, 1445, 1595, 1722, 1989, 2602, 2972 |
| MfeI | CAATTG | 3 cut(s) | 885, 1121, 3172 |
| MflI | RGATCY | 5 cut(s) | 480, 2380, 2660, 2833, 3127 |
| MhlI | GDGCHC | 3 cut(s) | 863, 1737, 2109 |
| MmeI | TCCRAC | 7 cut(s) | 525, 760, 805, 1126, 1268, 2928, 2942 |
| Mph1103I | ATGCAT | 5 cut(s) | 448, 1438, 1680, 2768, 3309 |
| MroI | TCCGGA | 1 cut(s) | 668 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1710 |
| MslI | CAYNNNNRTG | 6 cut(s) | 425, 1402, 1404, 1673, 1767, 3505 |
| MspA1I | CMGCKG | 1 cut(s) | 2052 |
| MspCI | CTTAAG | 1 cut(s) | 359 |
| MspI | CCGG | 5 cut(s) | 216, 383, 669, 1737, 2460 |
| MspR9I | CCNGG | 3 cut(s) | 1737, 3081, 3504 |
| MunI | CAATTG | 3 cut(s) | 885, 1121, 3172 |
| Mva1269I | GAATGC | 3 cut(s) | 602, 1873, 3307 |
| MvaI | CCWGG | 2 cut(s) | 3081, 3504 |
| MvnI | CGCG | 3 cut(s) | 286, 1924, 3135 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 170, 1337, 1840 |
| NciI | CCSGG | 1 cut(s) | 1737 |
| NcoI | CCATGG | 1 cut(s) | 14 |
| NdeI | CATATG | 2 cut(s) | 918, 3346 |
| NlaIV | GGNNCC | 3 cut(s) | 220, 1967, 2662 |
| NmuCI | GTSAC | 5 cut(s) | 1036, 1595, 1722, 1989, 2602 |
| NruI | TCGCGA | 1 cut(s) | 3135 |
| NsiI | ATGCAT | 5 cut(s) | 448, 1438, 1680, 2768, 3309 |
| NspV | TTCGAA | 2 cut(s) | 452, 2986 |
| PaeR7I | CTCGAG | 1 cut(s) | 2441 |
| PagI | TCATGA | 1 cut(s) | 1762 |
| PauI | GCGCGC | 1 cut(s) | 1922 |
| PciSI | GCTCTTC | 1 cut(s) | 1283 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 432 |
| PctI | GAATGC | 3 cut(s) | 602, 1873, 3307 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1710 |
| PfoI | TCCNGGA | 1 cut(s) | 3079 |
| PkrI | GCNGC | 9 cut(s) | 148, 163, 658, 1175, 1667, 2051, 2054, 2492, 3479 |
| Ple19I | CGATCG | 1 cut(s) | 402 |
| PpuMI | RGGWCCY | 1 cut(s) | 339 |
| PshBI | ATTAAT | 1 cut(s) | 2769 |
| PsiI | TTATAA | 5 cut(s) | 903, 1497, 1646, 1910, 2096 |
| Psp5II | RGGWCCY | 1 cut(s) | 339 |
| Psp6I | CCWGG | 2 cut(s) | 3079, 3502 |
| PspEI | GGTNACC | 1 cut(s) | 1036 |
| PspFI | CCCAGC | 3 cut(s) | 186, 1838, 3248 |
| PspGI | CCWGG | 2 cut(s) | 3079, 3502 |
| PspN4I | GGNNCC | 3 cut(s) | 220, 1967, 2662 |
| PspPI | GGNCC | 4 cut(s) | 53, 339, 385, 1126 |
| PspPPI | RGGWCCY | 1 cut(s) | 339 |
| PsuI | RGATCY | 5 cut(s) | 480, 2380, 2660, 2833, 3127 |
| PteI | GCGCGC | 1 cut(s) | 1922 |
| PvuI | CGATCG | 1 cut(s) | 402 |
| PvuII | CAGCTG | 1 cut(s) | 2052 |
| RruI | TCGCGA | 1 cut(s) | 3135 |
| RsaI | GTAC | 6 cut(s) | 311, 552, 773, 1626, 2182, 2948 |
| RsaNI | GTAC | 6 cut(s) | 310, 551, 772, 1625, 2181, 2947 |
| RseI | CAYNNNNRTG | 6 cut(s) | 425, 1402, 1404, 1673, 1767, 3505 |
| SalI | GTCGAC | 1 cut(s) | 3370 |
| SapI | GCTCTTC | 1 cut(s) | 1283 |
| SatI | GCNGC | 9 cut(s) | 147, 162, 657, 1174, 1666, 2050, 2053, 2491, 3478 |
| Sau96I | GGNCC | 4 cut(s) | 53, 339, 385, 1126 |
| ScaI | AGTACT | 1 cut(s) | 1626 |
| ScrFI | CCNGG | 3 cut(s) | 1737, 3081, 3504 |
| SduI | GDGCHC | 3 cut(s) | 863, 1737, 2109 |
| SfaNI | GCATC | 8 cut(s) | 455, 565, 1501, 1665, 2240, 2851, 3261, 3405 |
| SfcI | CTRYAG | 1 cut(s) | 2254 |
| Sfr274I | CTCGAG | 1 cut(s) | 2441 |
| SfuI | TTCGAA | 2 cut(s) | 452, 2986 |
| SinI | GGWCC | 2 cut(s) | 339, 1126 |
| SlaI | CTCGAG | 1 cut(s) | 2441 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 425, 1402, 1404, 1673, 1767, 3505 |
| SmlI | CTYRAG | 5 cut(s) | 359, 485, 1844, 2330, 2441 |
| SmoI | CTYRAG | 5 cut(s) | 359, 485, 1844, 2330, 2441 |
| SsiI | CCGC | 3 cut(s) | 1514, 2658, 3480 |
| SspI | AATATT | 1 cut(s) | 1651 |
| SspMI | CTAG | 9 cut(s) | 941, 1016, 1505, 1559, 1586, 2513, 2643, 2721, 3491 |
| StyD4I | CCNGG | 3 cut(s) | 1735, 3079, 3502 |
| StyI | CCWWGG | 1 cut(s) | 14 |
| TaaI | ACNGT | 3 cut(s) | 314, 1367, 2318 |
| TaiI | ACGT | 6 cut(s) | 234, 258, 825, 1527, 1747, 2920 |
| TaqI | TCGA | 8 cut(s) | 402, 410, 452, 1900, 2425, 2442, 2986, 3371 |
| TaqII | GACCGA | 2 cut(s) | 563, 3233 |
| TatI | WGTACW | 4 cut(s) | 309, 1624, 2180, 2946 |
| TscAI | CASTG | 4 cut(s) | 55, 123, 868, 3301 |
| TseFI | GTSAC | 5 cut(s) | 1036, 1595, 1722, 1989, 2602 |
| TseI | GCWGC | 9 cut(s) | 146, 161, 656, 1173, 1665, 2049, 2052, 2490, 3477 |
| Tsp45I | GTSAC | 5 cut(s) | 1036, 1595, 1722, 1989, 2602 |
| TspGWI | ACGGA | 6 cut(s) | 55, 531, 1670, 1817, 1977, 2519 |
| TspRI | CASTG | 4 cut(s) | 55, 123, 868, 3301 |
| Vha464I | CTTAAG | 1 cut(s) | 359 |
| VpaK11BI | GGWCC | 2 cut(s) | 339, 1126 |
| VspI | ATTAAT | 1 cut(s) | 2769 |
| XbaI | TCTAGA | 2 cut(s) | 940, 2642 |
| XhoI | CTCGAG | 1 cut(s) | 2441 |
| XmiI | GTMKAC | 2 cut(s) | 1353, 3371 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1710 |
| XspI | CTAG | 9 cut(s) | 941, 1016, 1505, 1559, 1586, 2513, 2643, 2721, 3491 |
| ZraI | GACGTC | 1 cut(s) | 256 |
| ZrmI | AGTACT | 1 cut(s) | 1626 |
| Zsp2I | ATGCAT | 5 cut(s) | 448, 1438, 1680, 2768, 3309 |