TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 428 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 367 |
| AccI | GTMKAC | 3 cut(s) | 175, 597, 1146 |
| AciI | CCGC | 5 cut(s) | 108, 704, 2034, 2297, 2356 |
| AclI | AACGTT | 1 cut(s) | 734 |
| AclWI | GGATC | 4 cut(s) | 327, 809, 1440, 1866 |
| AcsI | RAATTY | 9 cut(s) | 77, 373, 540, 1542, 1755, 1915, 1977, 2153, 2205 |
| AdeI | CACNNNGTG | 2 cut(s) | 701, 931 |
| AfaI | GTAC | 6 cut(s) | 68, 708, 924, 1378, 1447, 2032 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 997, 1008, 2018, 2303, 2324, 2362 |
| AflII | CTTAAG | 1 cut(s) | 20 |
| AgeI | ACCGGT | 1 cut(s) | 2324 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 182 |
| AjiI | CACGTC | 1 cut(s) | 475 |
| AjnI | CCWGG | 2 cut(s) | 241, 1108 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 141, 173, 1611, 1643 |
| AluBI | AGCT | 9 cut(s) | 17, 312, 629, 788, 829, 919, 950, 2017, 2215 |
| AluI | AGCT | 9 cut(s) | 17, 312, 629, 788, 829, 919, 950, 2017, 2215 |
| Alw26I | GTCTC | 6 cut(s) | 65, 353, 1490, 1561, 1774, 2188 |
| AlwI | GGATC | 4 cut(s) | 327, 809, 1440, 1866 |
| AoxI | GGCC | 5 cut(s) | 47, 239, 340, 721, 999 |
| ApeKI | GCWGC | 4 cut(s) | 29, 1119, 1683, 1896 |
| ApoI | RAATTY | 9 cut(s) | 77, 373, 540, 1542, 1755, 1915, 1977, 2153, 2205 |
| AsiGI | ACCGGT | 1 cut(s) | 2324 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 653 |
| AspS9I | GGNCC | 4 cut(s) | 239, 668, 1198, 2378 |
| AsuHPI | GGTGA | 4 cut(s) | 409, 1089, 1949, 2339 |
| AvaII | GGWCC | 3 cut(s) | 668, 1198, 2378 |
| BbsI | GAAGAC | 3 cut(s) | 17, 2126, 2266 |
| BbvI | GCAGC | 4 cut(s) | 41, 1131, 1695, 1908 |
| BccI | CCATC | 5 cut(s) | 39, 53, 1024, 1364, 2321 |
| BciT130I | CCWGG | 2 cut(s) | 243, 1110 |
| BclI | TGATCA | 2 cut(s) | 409, 622 |
| BcoDI | GTCTC | 6 cut(s) | 65, 353, 1490, 1561, 1774, 2188 |
| BfaI | CTAG | 4 cut(s) | 344, 486, 944, 2018 |
| BfrI | CTTAAG | 1 cut(s) | 20 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1022 |
| BisI | GCNGC | 5 cut(s) | 30, 1120, 1684, 1897, 2356 |
| BlsI | GCNGC | 5 cut(s) | 31, 1121, 1685, 1898, 2357 |
| Bme1390I | CCNGG | 2 cut(s) | 243, 1110 |
| Bme18I | GGWCC | 3 cut(s) | 668, 1198, 2378 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 182 |
| BmgBI | CACGTC | 1 cut(s) | 475 |
| BmgT120I | GGNCC | 4 cut(s) | 239, 668, 1198, 2378 |
| BmiI | GGNNCC | 2 cut(s) | 240, 1200 |
| BmrFI | CCNGG | 2 cut(s) | 243, 1110 |
| BmsI | GCATC | 7 cut(s) | 847, 1038, 1419, 1505, 1718, 2030, 2379 |
| BpiI | GAAGAC | 3 cut(s) | 17, 2126, 2266 |
| BpmI | CTGGAG | 2 cut(s) | 1326, 2231 |
| BpuEI | CTTGAG | 4 cut(s) | 1423, 1514, 1585, 1798 |
| BsaBI | GATNNNNATC | 1 cut(s) | 621 |
| BsaI | GGTCTC | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 6 cut(s) | 204, 718, 1109, 1202, 2200, 2359 |
| BsaWI | WCCGGW | 1 cut(s) | 2324 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 997, 1008, 2018, 2303, 2324, 2362 |
| Bse118I | RCCGGY | 1 cut(s) | 2324 |
| Bse1I | ACTGG | 6 cut(s) | 1330, 1530, 1547, 1743, 1760, 1821 |
| Bse8I | GATNNNNATC | 1 cut(s) | 621 |
| BseBI | CCWGG | 2 cut(s) | 243, 1110 |
| BseDI | CCNNGG | 6 cut(s) | 204, 718, 1109, 1202, 2200, 2359 |
| BseJI | GATNNNNATC | 1 cut(s) | 621 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 997, 1008, 2018, 2303, 2324, 2362 |
| BseNI | ACTGG | 6 cut(s) | 1330, 1530, 1547, 1743, 1760, 1821 |
| BseRI | GAGGAG | 2 cut(s) | 113, 791 |
| BseXI | GCAGC | 4 cut(s) | 41, 1131, 1695, 1908 |
| BseYI | CCCAGC | 1 cut(s) | 2085 |
| BsgI | GTGCAG | 1 cut(s) | 1915 |
| BshFI | GGCC | 5 cut(s) | 49, 241, 342, 723, 1001 |
| BshTI | ACCGGT | 1 cut(s) | 2324 |
| BsiSI | CCGG | 1 cut(s) | 2325 |
| BslFI | GGGAC | 1 cut(s) | 1184 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 997, 1008, 2018, 2303, 2324, 2362 |
| BsmAI | GTCTC | 6 cut(s) | 65, 353, 1490, 1561, 1774, 2188 |
| BsmBI | CGTCTC | 2 cut(s) | 353, 1561 |
| BsmFI | GGGAC | 1 cut(s) | 1184 |
| BsmI | GAATGC | 6 cut(s) | 444, 653, 655, 1191, 1234, 1946 |
| BsnI | GGCC | 5 cut(s) | 49, 241, 342, 723, 1001 |
| Bso31I | GGTCTC | 1 cut(s) | 65 |
| Bsp1407I | TGTACA | 2 cut(s) | 922, 1376 |
| Bsp143I | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| BspACI | CCGC | 5 cut(s) | 108, 704, 2034, 2297, 2356 |
| BspANI | GGCC | 5 cut(s) | 49, 241, 342, 723, 1001 |
| BspHI | TCATGA | 1 cut(s) | 2390 |
| BspLI | GGNNCC | 2 cut(s) | 240, 1200 |
| BspPI | GGATC | 4 cut(s) | 327, 809, 1440, 1866 |
| BspTI | CTTAAG | 1 cut(s) | 20 |
| BspTNI | GGTCTC | 1 cut(s) | 65 |
| BsrFI | RCCGGY | 1 cut(s) | 2324 |
| BsrGI | TGTACA | 2 cut(s) | 922, 1376 |
| BsrI | ACTGG | 6 cut(s) | 1330, 1530, 1547, 1743, 1760, 1821 |
| BssAI | RCCGGY | 1 cut(s) | 2324 |
| BssECI | CCNNGG | 6 cut(s) | 204, 718, 1109, 1202, 2200, 2359 |
| BssMI | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| BssNAI | GTATAC | 1 cut(s) | 598 |
| BssT1I | CCWWGG | 1 cut(s) | 718 |
| Bst1107I | GTATAC | 1 cut(s) | 598 |
| Bst2UI | CCWGG | 2 cut(s) | 243, 1110 |
| Bst4CI | ACNGT | 3 cut(s) | 1893, 2100, 2228 |
| Bst6I | CTCTTC | 3 cut(s) | 1271, 1506, 1632 |
| BstAFI | CTTAAG | 1 cut(s) | 20 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 701 |
| BstAUI | TGTACA | 2 cut(s) | 922, 1376 |
| BstC8I | GCNNGC | 3 cut(s) | 827, 2143, 2368 |
| BstDEI | CTNAG | 3 cut(s) | 830, 1259, 1880 |
| BstDSI | CCRYGG | 1 cut(s) | 1202 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1006 |
| BstKTI | GATC | 8 cut(s) | 335, 412, 625, 682, 817, 1435, 1861, 1933 |
| BstMAI | GTCTC | 6 cut(s) | 65, 353, 1490, 1561, 1774, 2188 |
| BstMBI | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 701, 1022 |
| BstNI | CCWGG | 2 cut(s) | 243, 1110 |
| BstNSI | RCATGY | 1 cut(s) | 203 |
| BstSCI | CCNGG | 2 cut(s) | 241, 1108 |
| BstV1I | GCAGC | 4 cut(s) | 41, 1131, 1695, 1908 |
| BstV2I | GAAGAC | 3 cut(s) | 17, 2126, 2266 |
| BstX2I | RGATCY | 4 cut(s) | 332, 814, 1432, 1858 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1337 |
| BstYI | RGATCY | 4 cut(s) | 332, 814, 1432, 1858 |
| BstZ17I | GTATAC | 1 cut(s) | 598 |
| BsuRI | GGCC | 5 cut(s) | 49, 241, 342, 723, 1001 |
| BtgI | CCRYGG | 1 cut(s) | 1202 |
| BtrI | CACGTC | 1 cut(s) | 475 |
| BtsI | GCAGTG | 3 cut(s) | 1594, 1807, 2350 |
| BtsIMutI | CAGTG | 5 cut(s) | 975, 1594, 1807, 2105, 2350 |
| Cac8I | GCNNGC | 3 cut(s) | 827, 2143, 2368 |
| CciI | TCATGA | 1 cut(s) | 2390 |
| Cfr10I | RCCGGY | 1 cut(s) | 2324 |
| Cfr13I | GGNCC | 4 cut(s) | 239, 668, 1198, 2378 |
| CseI | GACGC | 2 cut(s) | 156, 370 |
| Csp6I | GTAC | 6 cut(s) | 67, 707, 923, 1377, 1446, 2031 |
| CspAI | ACCGGT | 1 cut(s) | 2324 |
| CviAII | CATG | 8 cut(s) | 129, 200, 223, 1052, 1505, 1680, 2260, 2391 |
| CviQI | GTAC | 6 cut(s) | 67, 707, 923, 1377, 1446, 2031 |
| DdeI | CTNAG | 3 cut(s) | 830, 1259, 1880 |
| DpnI | GATC | 8 cut(s) | 334, 411, 624, 681, 816, 1434, 1860, 1932 |
| DpnII | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| DraI | TTTAAA | 1 cut(s) | 910 |
| DraIII | CACNNNGTG | 2 cut(s) | 701, 931 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 367 |
| DriI | GACNNNNNGTC | 1 cut(s) | 182 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 367 |
| Eam1104I | CTCTTC | 3 cut(s) | 1271, 1506, 1632 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 182 |
| EarI | CTCTTC | 3 cut(s) | 1271, 1506, 1632 |
| EciI | GGCGGA | 1 cut(s) | 97 |
| Eco130I | CCWWGG | 1 cut(s) | 718 |
| Eco147I | AGGCCT | 2 cut(s) | 723, 1001 |
| Eco31I | GGTCTC | 1 cut(s) | 65 |
| Eco32I | GATATC | 1 cut(s) | 1221 |
| Eco47I | GGWCC | 3 cut(s) | 668, 1198, 2378 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1006 |
| EcoO109I | RGGNCCY | 2 cut(s) | 239, 1198 |
| EcoRI | GAATTC | 2 cut(s) | 540, 2205 |
| EcoRII | CCWGG | 2 cut(s) | 241, 1108 |
| EcoRV | GATATC | 1 cut(s) | 1221 |
| EcoT14I | CCWWGG | 1 cut(s) | 718 |
| EcoT22I | ATGCAT | 2 cut(s) | 655, 1053 |
| ErhI | CCWWGG | 1 cut(s) | 718 |
| Esp3I | CGTCTC | 2 cut(s) | 353, 1561 |
| FaeI | CATG | 8 cut(s) | 132, 203, 226, 1055, 1508, 1683, 2263, 2394 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 348, 380, 903, 935 |
| FaqI | GGGAC | 1 cut(s) | 1184 |
| FatI | CATG | 8 cut(s) | 128, 199, 222, 1051, 1504, 1679, 2259, 2390 |
| FauNDI | CATATG | 1 cut(s) | 233 |
| FbaI | TGATCA | 2 cut(s) | 409, 622 |
| FblI | GTMKAC | 3 cut(s) | 175, 597, 1146 |
| Fnu4HI | GCNGC | 5 cut(s) | 30, 1120, 1684, 1897, 2356 |
| Fsp4HI | GCNGC | 5 cut(s) | 30, 1120, 1684, 1897, 2356 |
| FspBI | CTAG | 4 cut(s) | 344, 486, 944, 2018 |
| GluI | GCNGC | 5 cut(s) | 30, 1120, 1684, 1897, 2356 |
| GsaI | CCCAGC | 1 cut(s) | 2089 |
| GsuI | CTGGAG | 2 cut(s) | 1326, 2231 |
| HaeIII | GGCC | 5 cut(s) | 49, 241, 342, 723, 1001 |
| HapII | CCGG | 1 cut(s) | 2325 |
| HgaI | GACGC | 2 cut(s) | 156, 370 |
| Hin1II | CATG | 8 cut(s) | 132, 203, 226, 1055, 1508, 1683, 2263, 2394 |
| HincII | GTYRAC | 1 cut(s) | 1147 |
| HindII | GTYRAC | 1 cut(s) | 1147 |
| HindIII | AAGCTT | 3 cut(s) | 627, 917, 948 |
| HpaII | CCGG | 1 cut(s) | 2325 |
| HphI | GGTGA | 4 cut(s) | 409, 1089, 1949, 2339 |
| Hpy166II | GTNNAC | 8 cut(s) | 176, 220, 598, 709, 925, 1147, 1446, 2231 |
| Hpy188I | TCNGA | 9 cut(s) | 191, 659, 1468, 1958, 2056, 2201, 2279, 2287, 2338 |
| Hpy8I | GTNNAC | 8 cut(s) | 176, 220, 598, 709, 925, 1147, 1446, 2231 |
| Hpy99I | CGWCG | 3 cut(s) | 89, 1151, 1154 |
| HpyAV | CCTTC | 7 cut(s) | 49, 135, 388, 734, 1249, 1493, 1577 |
| HpyCH4III | ACNGT | 3 cut(s) | 1893, 2100, 2228 |
| HpyCH4IV | ACGT | 3 cut(s) | 474, 734, 1152 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 701, 1022 |
| HpyF3I | CTNAG | 3 cut(s) | 830, 1259, 1880 |
| HpySE526I | ACGT | 3 cut(s) | 474, 734, 1152 |
| Hsp92II | CATG | 8 cut(s) | 132, 203, 226, 1055, 1508, 1683, 2263, 2394 |
| Ksp22I | TGATCA | 2 cut(s) | 409, 622 |
| Kzo9I | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| LmnI | GCTCC | 1 cut(s) | 2212 |
| Lsp1109I | GCAGC | 4 cut(s) | 41, 1131, 1695, 1908 |
| LweI | GCATC | 7 cut(s) | 847, 1038, 1419, 1505, 1718, 2030, 2379 |
| MaeI | CTAG | 4 cut(s) | 344, 486, 944, 2018 |
| MaeII | ACGT | 3 cut(s) | 474, 734, 1152 |
| MaeIII | GTNAC | 6 cut(s) | 131, 953, 1095, 1589, 1802, 2168 |
| MalI | GATC | 8 cut(s) | 334, 411, 624, 681, 816, 1434, 1860, 1932 |
| MboI | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| MfeI | CAATTG | 4 cut(s) | 156, 264, 1614, 1827 |
| MflI | RGATCY | 4 cut(s) | 332, 814, 1432, 1858 |
| MmeI | TCCRAC | 4 cut(s) | 1019, 1350, 1410, 1988 |
| Mph1103I | ATGCAT | 2 cut(s) | 655, 1053 |
| MroXI | GAANNNNTTC | 1 cut(s) | 653 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1509, 2098 |
| MspCI | CTTAAG | 1 cut(s) | 20 |
| MspI | CCGG | 1 cut(s) | 2325 |
| MspR9I | CCNGG | 2 cut(s) | 243, 1110 |
| MunI | CAATTG | 4 cut(s) | 156, 264, 1614, 1827 |
| Mva1269I | GAATGC | 6 cut(s) | 444, 653, 655, 1191, 1234, 1946 |
| MvaI | CCWGG | 2 cut(s) | 243, 1110 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 701, 1022 |
| NdeI | CATATG | 1 cut(s) | 233 |
| NdeII | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| NlaIII | CATG | 8 cut(s) | 132, 203, 226, 1055, 1508, 1683, 2263, 2394 |
| NlaIV | GGNNCC | 2 cut(s) | 240, 1200 |
| NmeAIII | GCCGAG | 2 cut(s) | 229, 2384 |
| NmuCI | GTSAC | 4 cut(s) | 1095, 1589, 1802, 2168 |
| NsiI | ATGCAT | 2 cut(s) | 655, 1053 |
| NspI | RCATGY | 1 cut(s) | 203 |
| PagI | TCATGA | 1 cut(s) | 2390 |
| PceI | AGGCCT | 2 cut(s) | 723, 1001 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 368 |
| PctI | GAATGC | 6 cut(s) | 444, 653, 655, 1191, 1234, 1946 |
| PdmI | GAANNNNTTC | 1 cut(s) | 653 |
| PinAI | ACCGGT | 1 cut(s) | 2324 |
| PkrI | GCNGC | 5 cut(s) | 31, 1121, 1685, 1898, 2357 |
| PpuMI | RGGWCCY | 1 cut(s) | 1198 |
| PsiI | TTATAA | 1 cut(s) | 428 |
| Psp1406I | AACGTT | 1 cut(s) | 734 |
| Psp5II | RGGWCCY | 1 cut(s) | 1198 |
| Psp6I | CCWGG | 2 cut(s) | 241, 1108 |
| PspFI | CCCAGC | 1 cut(s) | 2085 |
| PspGI | CCWGG | 2 cut(s) | 241, 1108 |
| PspN4I | GGNNCC | 2 cut(s) | 240, 1200 |
| PspPI | GGNCC | 4 cut(s) | 239, 668, 1198, 2378 |
| PspPPI | RGGWCCY | 1 cut(s) | 1198 |
| PsuI | RGATCY | 4 cut(s) | 332, 814, 1432, 1858 |
| RsaI | GTAC | 6 cut(s) | 68, 708, 924, 1378, 1447, 2032 |
| RsaNI | GTAC | 6 cut(s) | 67, 707, 923, 1377, 1446, 2031 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1509, 2098 |
| SalI | GTCGAC | 1 cut(s) | 1145 |
| SatI | GCNGC | 5 cut(s) | 30, 1120, 1684, 1897, 2356 |
| Sau3AI | GATC | 8 cut(s) | 332, 409, 622, 679, 814, 1432, 1858, 1930 |
| Sau96I | GGNCC | 4 cut(s) | 239, 668, 1198, 2378 |
| ScrFI | CCNGG | 2 cut(s) | 243, 1110 |
| SfaNI | GCATC | 7 cut(s) | 847, 1038, 1419, 1505, 1718, 2030, 2379 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2324 |
| SinI | GGWCC | 3 cut(s) | 668, 1198, 2378 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1509, 2098 |
| SmlI | CTYRAG | 5 cut(s) | 20, 1402, 1493, 1564, 1777 |
| SmoI | CTYRAG | 5 cut(s) | 20, 1402, 1493, 1564, 1777 |
| SseBI | AGGCCT | 2 cut(s) | 723, 1001 |
| SsiI | CCGC | 5 cut(s) | 108, 704, 2034, 2297, 2356 |
| SspI | AATATT | 2 cut(s) | 214, 1853 |
| SspMI | CTAG | 4 cut(s) | 344, 486, 944, 2018 |
| StuI | AGGCCT | 2 cut(s) | 723, 1001 |
| StyD4I | CCNGG | 2 cut(s) | 241, 1108 |
| StyI | CCWWGG | 1 cut(s) | 718 |
| TaaI | ACNGT | 3 cut(s) | 1893, 2100, 2228 |
| TaiI | ACGT | 3 cut(s) | 477, 737, 1155 |
| TaqI | TCGA | 5 cut(s) | 84, 371, 1146, 1477, 1989 |
| TatI | WGTACW | 2 cut(s) | 922, 1376 |
| TauI | GCSGC | 1 cut(s) | 2358 |
| TscAI | CASTG | 5 cut(s) | 975, 1594, 1807, 2105, 2357 |
| TseFI | GTSAC | 4 cut(s) | 1095, 1589, 1802, 2168 |
| TseI | GCWGC | 4 cut(s) | 29, 1119, 1683, 1896 |
| Tsp45I | GTSAC | 4 cut(s) | 1095, 1589, 1802, 2168 |
| TspGWI | ACGGA | 2 cut(s) | 2242, 2319 |
| TspRI | CASTG | 5 cut(s) | 975, 1594, 1807, 2105, 2357 |
| Vha464I | CTTAAG | 1 cut(s) | 20 |
| VpaK11BI | GGWCC | 3 cut(s) | 668, 1198, 2378 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1006 |
| XapI | RAATTY | 9 cut(s) | 77, 373, 540, 1542, 1755, 1915, 1977, 2153, 2205 |
| XceI | RCATGY | 1 cut(s) | 203 |
| XmiI | GTMKAC | 3 cut(s) | 175, 597, 1146 |
| XmnI | GAANNNNTTC | 1 cut(s) | 653 |
| XspI | CTAG | 4 cut(s) | 344, 486, 944, 2018 |
| Zsp2I | ATGCAT | 2 cut(s) | 655, 1053 |