TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_At1g61320_AtMIF1 | PF23622 | 106 - 202 | 8e-06 | At1g61320/AtMIF1, LRR domain |
| LRR_13 | PF23286 | 107 - 192 | 2.3e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 130 - 192 | 9.7e-09 | Leucine-rich repeat region |
| LRR_4 | PF12799 | 131 - 170 | 3.1e-06 | Leucine Rich repeats (2 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 989 |
| Acc36I | ACCTGC | 1 cut(s) | 989 |
| AccB1I | GGYRCC | 1 cut(s) | 1158 |
| AciI | CCGC | 6 cut(s) | 667, 860, 884, 962, 985, 1229 |
| AclWI | GGATC | 4 cut(s) | 76, 317, 417, 434 |
| AcoI | YGGCCR | 2 cut(s) | 241, 850 |
| AcuI | CTGAAG | 1 cut(s) | 942 |
| AcyI | GRCGYC | 1 cut(s) | 1159 |
| AfaI | GTAC | 3 cut(s) | 510, 1058, 1150 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 43, 239, 859, 1298 |
| AflII | CTTAAG | 1 cut(s) | 359 |
| AgeI | ACCGGT | 1 cut(s) | 613 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 391, 807 |
| AhlI | ACTAGT | 2 cut(s) | 79, 803 |
| AjnI | CCWGG | 1 cut(s) | 405 |
| AluBI | AGCT | 7 cut(s) | 183, 199, 256, 289, 550, 704, 1305 |
| AluI | AGCT | 7 cut(s) | 183, 199, 256, 289, 550, 704, 1305 |
| Alw26I | GTCTC | 4 cut(s) | 251, 378, 483, 808 |
| AlwI | GGATC | 4 cut(s) | 76, 317, 417, 434 |
| AoxI | GGCC | 4 cut(s) | 241, 463, 850, 1102 |
| ApaI | GGGCCC | 1 cut(s) | 1106 |
| ApeKI | GCWGC | 1 cut(s) | 289 |
| AseI | ATTAAT | 1 cut(s) | 1004 |
| AsiGI | ACCGGT | 1 cut(s) | 613 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 603, 782 |
| AspLEI | GCGC | 1 cut(s) | 1161 |
| AspS9I | GGNCC | 3 cut(s) | 46, 1102, 1103 |
| AsuHPI | GGTGA | 2 cut(s) | 265, 970 |
| AsuII | TTCGAA | 1 cut(s) | 776 |
| AvaII | GGWCC | 1 cut(s) | 46 |
| BaeGI | GKGCMC | 1 cut(s) | 1106 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 492, 525 |
| BalI | TGGCCA | 1 cut(s) | 852 |
| BanI | GGYRCC | 1 cut(s) | 1158 |
| BanII | GRGCYC | 1 cut(s) | 1106 |
| BauI | CACGAG | 1 cut(s) | 693 |
| BbvI | GCAGC | 1 cut(s) | 276 |
| BccI | CCATC | 3 cut(s) | 374, 520, 1159 |
| BceAI | ACGGC | 2 cut(s) | 228, 972 |
| BciT130I | CCWGG | 1 cut(s) | 407 |
| BcoDI | GTCTC | 4 cut(s) | 251, 378, 483, 808 |
| BcuI | ACTAGT | 2 cut(s) | 79, 803 |
| BfaI | CTAG | 3 cut(s) | 80, 423, 804 |
| BfmI | CTRYAG | 1 cut(s) | 290 |
| BfoI | RGCGCY | 1 cut(s) | 1162 |
| BfrI | CTTAAG | 1 cut(s) | 359 |
| BfuAI | ACCTGC | 1 cut(s) | 989 |
| BisI | GCNGC | 5 cut(s) | 290, 668, 885, 985, 1229 |
| BlsI | GCNGC | 5 cut(s) | 291, 669, 886, 986, 1230 |
| Bme1390I | CCNGG | 1 cut(s) | 407 |
| Bme18I | GGWCC | 1 cut(s) | 46 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 391, 807 |
| BmgT120I | GGNCC | 3 cut(s) | 46, 1102, 1103 |
| BmiI | GGNNCC | 3 cut(s) | 47, 1104, 1160 |
| BmrFI | CCNGG | 1 cut(s) | 407 |
| BmsI | GCATC | 2 cut(s) | 528, 1215 |
| BpmI | CTGGAG | 1 cut(s) | 563 |
| Bpu14I | TTCGAA | 1 cut(s) | 776 |
| BpuEI | CTTGAG | 1 cut(s) | 61 |
| BsaAI | YACGTR | 1 cut(s) | 1152 |
| BsaHI | GRCGYC | 1 cut(s) | 1159 |
| BsaJI | CCNNGG | 1 cut(s) | 142 |
| BsaWI | WCCGGW | 1 cut(s) | 613 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 33, 1198, 1228 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 43, 239, 859, 1298 |
| Bse118I | RCCGGY | 2 cut(s) | 613, 663 |
| Bse1I | ACTGG | 3 cut(s) | 466, 977, 1282 |
| BseBI | CCWGG | 1 cut(s) | 407 |
| BseDI | CCNNGG | 1 cut(s) | 142 |
| BseGI | GGATG | 2 cut(s) | 229, 1230 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 43, 239, 859, 1298 |
| BseMII | CTCAG | 2 cut(s) | 459, 864 |
| BseNI | ACTGG | 3 cut(s) | 466, 977, 1282 |
| BseRI | GAGGAG | 1 cut(s) | 560 |
| BseSI | GKGCMC | 1 cut(s) | 1106 |
| BseXI | GCAGC | 1 cut(s) | 276 |
| BseYI | CCCAGC | 1 cut(s) | 1305 |
| Bsh1285I | CGRYCG | 1 cut(s) | 790 |
| BshFI | GGCC | 4 cut(s) | 243, 465, 852, 1104 |
| BshNI | GGYRCC | 1 cut(s) | 1158 |
| BshTI | ACCGGT | 1 cut(s) | 613 |
| BsiEI | CGRYCG | 1 cut(s) | 790 |
| BsiSI | CCGG | 2 cut(s) | 614, 664 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 43, 239, 859, 1298 |
| BsmAI | GTCTC | 4 cut(s) | 251, 378, 483, 808 |
| BsmBI | CGTCTC | 1 cut(s) | 251 |
| BsmI | GAATGC | 1 cut(s) | 569 |
| BsnI | GGCC | 4 cut(s) | 243, 465, 852, 1104 |
| Bsp119I | TTCGAA | 1 cut(s) | 776 |
| Bsp120I | GGGCCC | 1 cut(s) | 1102 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1106 |
| Bsp143I | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| Bsp19I | CCATGG | 1 cut(s) | 142 |
| BspACI | CCGC | 6 cut(s) | 667, 860, 884, 962, 985, 1229 |
| BspANI | GGCC | 4 cut(s) | 243, 465, 852, 1104 |
| BspCNI | CTCAG | 2 cut(s) | 458, 865 |
| BspLI | GGNNCC | 3 cut(s) | 47, 1104, 1160 |
| BspMAI | CTGCAG | 1 cut(s) | 294 |
| BspMI | ACCTGC | 1 cut(s) | 989 |
| BspPI | GGATC | 4 cut(s) | 76, 317, 417, 434 |
| BspT104I | TTCGAA | 1 cut(s) | 776 |
| BspT107I | GGYRCC | 1 cut(s) | 1158 |
| BspTI | CTTAAG | 1 cut(s) | 359 |
| BsrFI | RCCGGY | 2 cut(s) | 613, 663 |
| BsrI | ACTGG | 3 cut(s) | 466, 977, 1282 |
| BssAI | RCCGGY | 2 cut(s) | 613, 663 |
| BssECI | CCNNGG | 1 cut(s) | 142 |
| BssMI | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| BssNI | GRCGYC | 1 cut(s) | 1159 |
| BssSI | CACGAG | 1 cut(s) | 693 |
| BssT1I | CCWWGG | 1 cut(s) | 142 |
| Bst2BI | CACGAG | 1 cut(s) | 693 |
| Bst2UI | CCWGG | 1 cut(s) | 407 |
| Bst4CI | ACNGT | 1 cut(s) | 1198 |
| Bst6I | CTCTTC | 1 cut(s) | 758 |
| BstACI | GRCGYC | 1 cut(s) | 1159 |
| BstAFI | CTTAAG | 1 cut(s) | 359 |
| BstBAI | YACGTR | 1 cut(s) | 1152 |
| BstBI | TTCGAA | 1 cut(s) | 776 |
| BstC8I | GCNNGC | 2 cut(s) | 487, 665 |
| BstDEI | CTNAG | 4 cut(s) | 413, 445, 557, 873 |
| BstDSI | CCRYGG | 1 cut(s) | 142 |
| BstF5I | GGATG | 2 cut(s) | 229, 1230 |
| BstH2I | RGCGCY | 1 cut(s) | 1162 |
| BstHHI | GCGC | 1 cut(s) | 1161 |
| BstKTI | GATC | 5 cut(s) | 71, 312, 412, 429, 1323 |
| BstMAI | GTCTC | 4 cut(s) | 251, 378, 483, 808 |
| BstMBI | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| BstMCI | CGRYCG | 1 cut(s) | 790 |
| BstNI | CCWGG | 1 cut(s) | 407 |
| BstSCI | CCNGG | 1 cut(s) | 405 |
| BstSFI | CTRYAG | 1 cut(s) | 290 |
| BstSLI | GKGCMC | 1 cut(s) | 1106 |
| BstV1I | GCAGC | 1 cut(s) | 276 |
| BstX2I | RGATCY | 1 cut(s) | 409 |
| BstYI | RGATCY | 1 cut(s) | 409 |
| BsuRI | GGCC | 4 cut(s) | 243, 465, 852, 1104 |
| BtgI | CCRYGG | 1 cut(s) | 142 |
| BtsCI | GGATG | 2 cut(s) | 229, 1230 |
| BtsIMutI | CAGTG | 1 cut(s) | 459 |
| BveI | ACCTGC | 1 cut(s) | 989 |
| Cac8I | GCNNGC | 2 cut(s) | 487, 665 |
| CfoI | GCGC | 1 cut(s) | 1161 |
| Cfr10I | RCCGGY | 2 cut(s) | 613, 663 |
| Cfr13I | GGNCC | 3 cut(s) | 46, 1102, 1103 |
| Csp6I | GTAC | 3 cut(s) | 509, 1057, 1149 |
| CspAI | ACCGGT | 1 cut(s) | 613 |
| CviAII | CATG | 4 cut(s) | 143, 316, 388, 1019 |
| CviQI | GTAC | 3 cut(s) | 509, 1057, 1149 |
| DdeI | CTNAG | 4 cut(s) | 413, 445, 557, 873 |
| DinI | GGCGCC | 1 cut(s) | 1160 |
| DpnI | GATC | 5 cut(s) | 70, 311, 411, 428, 1322 |
| DpnII | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| DriI | GACNNNNNGTC | 2 cut(s) | 391, 807 |
| EaeI | YGGCCR | 2 cut(s) | 241, 850 |
| Eam1104I | CTCTTC | 1 cut(s) | 758 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 391, 807 |
| EarI | CTCTTC | 1 cut(s) | 758 |
| Eco130I | CCWWGG | 1 cut(s) | 142 |
| Eco24I | GRGCYC | 1 cut(s) | 1106 |
| Eco47I | GGWCC | 1 cut(s) | 46 |
| Eco57I | CTGAAG | 1 cut(s) | 942 |
| EcoO109I | RGGNCCY | 3 cut(s) | 46, 1102, 1103 |
| EcoRI | GAATTC | 3 cut(s) | 58, 156, 926 |
| EcoRII | CCWGG | 1 cut(s) | 405 |
| EcoT14I | CCWWGG | 1 cut(s) | 142 |
| EcoT38I | GRGCYC | 1 cut(s) | 1106 |
| EgeI | GGCGCC | 1 cut(s) | 1160 |
| EheI | GGCGCC | 1 cut(s) | 1160 |
| ErhI | CCWWGG | 1 cut(s) | 142 |
| Esp3I | CGTCTC | 1 cut(s) | 251 |
| FaeI | CATG | 4 cut(s) | 146, 319, 391, 1022 |
| FatI | CATG | 4 cut(s) | 142, 315, 387, 1018 |
| Fnu4HI | GCNGC | 5 cut(s) | 290, 668, 885, 985, 1229 |
| FokI | GGATG | 2 cut(s) | 216, 1237 |
| FriOI | GRGCYC | 1 cut(s) | 1106 |
| Fsp4HI | GCNGC | 5 cut(s) | 290, 668, 885, 985, 1229 |
| FspBI | CTAG | 3 cut(s) | 80, 423, 804 |
| GlaI | GCGC | 1 cut(s) | 1160 |
| GluI | GCNGC | 5 cut(s) | 290, 668, 885, 985, 1229 |
| GsaI | CCCAGC | 1 cut(s) | 1309 |
| GsuI | CTGGAG | 1 cut(s) | 563 |
| HaeII | RGCGCY | 1 cut(s) | 1162 |
| HaeIII | GGCC | 4 cut(s) | 243, 465, 852, 1104 |
| HapII | CCGG | 2 cut(s) | 614, 664 |
| HhaI | GCGC | 1 cut(s) | 1161 |
| Hin1I | GRCGYC | 1 cut(s) | 1159 |
| Hin1II | CATG | 4 cut(s) | 146, 319, 391, 1022 |
| Hin6I | GCGC | 1 cut(s) | 1159 |
| HinP1I | GCGC | 1 cut(s) | 1159 |
| HincII | GTYRAC | 1 cut(s) | 894 |
| HindII | GTYRAC | 1 cut(s) | 894 |
| HindIII | AAGCTT | 1 cut(s) | 181 |
| HinfI | GANTC | 8 cut(s) | 355, 599, 773, 816, 863, 895, 958, 1311 |
| HpaII | CCGG | 2 cut(s) | 614, 664 |
| HphI | GGTGA | 2 cut(s) | 265, 970 |
| Hpy166II | GTNNAC | 4 cut(s) | 894, 978, 1117, 1315 |
| Hpy188I | TCNGA | 9 cut(s) | 346, 501, 598, 685, 813, 874, 922, 947, 957 |
| Hpy188III | TCNNGA | 6 cut(s) | 161, 171, 248, 302, 542, 636 |
| Hpy8I | GTNNAC | 4 cut(s) | 894, 978, 1117, 1315 |
| HpyAV | CCTTC | 5 cut(s) | 8, 59, 94, 243, 710 |
| HpyCH4III | ACNGT | 1 cut(s) | 1198 |
| HpyCH4IV | ACGT | 2 cut(s) | 538, 1151 |
| HpyCH4V | TGCA | 5 cut(s) | 76, 292, 535, 1029, 1177 |
| HpyF3I | CTNAG | 4 cut(s) | 413, 445, 557, 873 |
| HpySE526I | ACGT | 2 cut(s) | 538, 1151 |
| Hsp92I | GRCGYC | 1 cut(s) | 1159 |
| Hsp92II | CATG | 4 cut(s) | 146, 319, 391, 1022 |
| HspAI | GCGC | 1 cut(s) | 1159 |
| KasI | GGCGCC | 1 cut(s) | 1158 |
| KroI | GCCGGC | 1 cut(s) | 663 |
| KroNI | GCCGGC | 1 cut(s) | 665 |
| Kzo9I | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| LmnI | GCTCC | 2 cut(s) | 196, 547 |
| Lsp1109I | GCAGC | 1 cut(s) | 276 |
| LweI | GCATC | 2 cut(s) | 528, 1215 |
| MaeI | CTAG | 3 cut(s) | 80, 423, 804 |
| MaeII | ACGT | 2 cut(s) | 538, 1151 |
| MaeIII | GTNAC | 4 cut(s) | 416, 435, 577, 1192 |
| MalI | GATC | 5 cut(s) | 70, 311, 411, 428, 1322 |
| MboI | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| MboII | GAAGA | 8 cut(s) | 358, 514, 686, 775, 935, 1337, 1346, 1349 |
| MfeI | CAATTG | 1 cut(s) | 1051 |
| MflI | RGATCY | 1 cut(s) | 409 |
| MhlI | GDGCHC | 1 cut(s) | 1106 |
| MlsI | TGGCCA | 1 cut(s) | 852 |
| MluNI | TGGCCA | 1 cut(s) | 852 |
| Mly113I | GGCGCC | 1 cut(s) | 1159 |
| MlyI | GAGTC | 3 cut(s) | 810, 889, 1320 |
| MmeI | TCCRAC | 3 cut(s) | 430, 693, 774 |
| Mox20I | TGGCCA | 1 cut(s) | 852 |
| MroNI | GCCGGC | 1 cut(s) | 663 |
| MroXI | GAANNNNTTC | 2 cut(s) | 603, 782 |
| MscI | TGGCCA | 1 cut(s) | 852 |
| MseI | TTAA | 6 cut(s) | 149, 176, 360, 468, 552, 1004 |
| Msp20I | TGGCCA | 1 cut(s) | 852 |
| MspCI | CTTAAG | 1 cut(s) | 359 |
| MspI | CCGG | 2 cut(s) | 614, 664 |
| MspR9I | CCNGG | 1 cut(s) | 407 |
| MunI | CAATTG | 1 cut(s) | 1051 |
| Mva1269I | GAATGC | 1 cut(s) | 569 |
| MvaI | CCWGG | 1 cut(s) | 407 |
| NaeI | GCCGGC | 1 cut(s) | 665 |
| NarI | GGCGCC | 1 cut(s) | 1159 |
| NcoI | CCATGG | 1 cut(s) | 142 |
| NdeII | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| NgoMIV | GCCGGC | 1 cut(s) | 663 |
| NlaIII | CATG | 4 cut(s) | 146, 319, 391, 1022 |
| NlaIV | GGNNCC | 3 cut(s) | 47, 1104, 1160 |
| NmuCI | GTSAC | 1 cut(s) | 416 |
| NspV | TTCGAA | 1 cut(s) | 776 |
| PaqCI | CACCTGC | 1 cut(s) | 989 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 255 |
| PctI | GAATGC | 1 cut(s) | 569 |
| PdiI | GCCGGC | 1 cut(s) | 665 |
| PdmI | GAANNNNTTC | 2 cut(s) | 603, 782 |
| PfeI | GAWTC | 5 cut(s) | 355, 599, 773, 863, 958 |
| PinAI | ACCGGT | 1 cut(s) | 613 |
| PkrI | GCNGC | 5 cut(s) | 291, 669, 886, 986, 1230 |
| PleI | GAGTC | 3 cut(s) | 810, 889, 1319 |
| PluTI | GGCGCC | 1 cut(s) | 1162 |
| PpsI | GAGTC | 3 cut(s) | 810, 889, 1319 |
| Ppu21I | YACGTR | 1 cut(s) | 1152 |
| PpuMI | RGGWCCY | 1 cut(s) | 46 |
| PshBI | ATTAAT | 1 cut(s) | 1004 |
| Psp5II | RGGWCCY | 1 cut(s) | 46 |
| Psp6I | CCWGG | 1 cut(s) | 405 |
| PspFI | CCCAGC | 1 cut(s) | 1305 |
| PspGI | CCWGG | 1 cut(s) | 405 |
| PspN4I | GGNNCC | 3 cut(s) | 47, 1104, 1160 |
| PspOMI | GGGCCC | 1 cut(s) | 1102 |
| PspPI | GGNCC | 3 cut(s) | 46, 1102, 1103 |
| PspPPI | RGGWCCY | 1 cut(s) | 46 |
| PstI | CTGCAG | 1 cut(s) | 294 |
| PsuI | RGATCY | 1 cut(s) | 409 |
| RsaI | GTAC | 3 cut(s) | 510, 1058, 1150 |
| RsaNI | GTAC | 3 cut(s) | 509, 1057, 1149 |
| SaqAI | TTAA | 6 cut(s) | 149, 176, 360, 468, 552, 1004 |
| SatI | GCNGC | 5 cut(s) | 290, 668, 885, 985, 1229 |
| Sau3AI | GATC | 5 cut(s) | 68, 309, 409, 426, 1320 |
| Sau96I | GGNCC | 3 cut(s) | 46, 1102, 1103 |
| SchI | GAGTC | 3 cut(s) | 810, 889, 1320 |
| ScrFI | CCNGG | 1 cut(s) | 407 |
| SduI | GDGCHC | 1 cut(s) | 1106 |
| SfaNI | GCATC | 2 cut(s) | 528, 1215 |
| SfcI | CTRYAG | 1 cut(s) | 290 |
| SfoI | GGCGCC | 1 cut(s) | 1160 |
| SfuI | TTCGAA | 1 cut(s) | 776 |
| SinI | GGWCC | 1 cut(s) | 46 |
| SmlI | CTYRAG | 2 cut(s) | 40, 359 |
| SmoI | CTYRAG | 2 cut(s) | 40, 359 |
| SpeI | ACTAGT | 2 cut(s) | 79, 803 |
| SsiI | CCGC | 6 cut(s) | 667, 860, 884, 962, 985, 1229 |
| SspDI | GGCGCC | 1 cut(s) | 1158 |
| SspMI | CTAG | 3 cut(s) | 80, 423, 804 |
| StyD4I | CCNGG | 1 cut(s) | 405 |
| StyI | CCWWGG | 1 cut(s) | 142 |
| TaaI | ACNGT | 1 cut(s) | 1198 |
| TaiI | ACGT | 2 cut(s) | 541, 1154 |
| TaqI | TCGA | 9 cut(s) | 84, 134, 249, 515, 635, 776, 1088, 1246, 1323 |
| TaqII | GACCGA | 1 cut(s) | 776 |
| TauI | GCSGC | 4 cut(s) | 670, 887, 987, 1231 |
| TfiI | GAWTC | 5 cut(s) | 355, 599, 773, 863, 958 |
| Tru1I | TTAA | 6 cut(s) | 149, 176, 360, 468, 552, 1004 |
| Tru9I | TTAA | 6 cut(s) | 149, 176, 360, 468, 552, 1004 |
| TscAI | CASTG | 1 cut(s) | 466 |
| TseFI | GTSAC | 1 cut(s) | 416 |
| TseI | GCWGC | 1 cut(s) | 289 |
| Tsp45I | GTSAC | 1 cut(s) | 416 |
| TspDTI | ATGAA | 7 cut(s) | 51, 218, 332, 404, 732, 1035, 1155 |
| TspRI | CASTG | 1 cut(s) | 466 |
| Vha464I | CTTAAG | 1 cut(s) | 359 |
| VpaK11BI | GGWCC | 1 cut(s) | 46 |
| VspI | ATTAAT | 1 cut(s) | 1004 |
| XmnI | GAANNNNTTC | 2 cut(s) | 603, 782 |
| XspI | CTAG | 3 cut(s) | 80, 423, 804 |