TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 63 - 197 | 9.2e-35 | TIR domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 28 |
| AccII | CGCG | 1 cut(s) | 239 |
| AclI | AACGTT | 1 cut(s) | 450 |
| AclWI | GGATC | 2 cut(s) | 425, 438 |
| AcsI | RAATTY | 2 cut(s) | 336, 553 |
| AfaI | GTAC | 2 cut(s) | 444, 519 |
| AflIII | ACRYGT | 1 cut(s) | 237 |
| AgeI | ACCGGT | 1 cut(s) | 412 |
| AgsI | TTSAA | 3 cut(s) | 326, 342, 455 |
| AluBI | AGCT | 3 cut(s) | 310, 507, 536 |
| AluI | AGCT | 3 cut(s) | 310, 507, 536 |
| Alw21I | GWGCWC | 1 cut(s) | 509 |
| AlwI | GGATC | 2 cut(s) | 425, 438 |
| ApeKI | GCWGC | 1 cut(s) | 548 |
| ApoI | RAATTY | 2 cut(s) | 336, 553 |
| AsiGI | ACCGGT | 1 cut(s) | 412 |
| AsuHPI | GGTGA | 1 cut(s) | 479 |
| BamHI | GGATCC | 1 cut(s) | 430 |
| BanII | GRGCYC | 2 cut(s) | 282, 509 |
| Bbv12I | GWGCWC | 1 cut(s) | 509 |
| BbvI | GCAGC | 1 cut(s) | 560 |
| BccI | CCATC | 1 cut(s) | 269 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 540, 574 |
| BciVI | GTATCC | 1 cut(s) | 196 |
| BclI | TGATCA | 1 cut(s) | 28 |
| BfaI | CTAG | 2 cut(s) | 356, 591 |
| BfuAI | ACCTGC | 1 cut(s) | 28 |
| BfuI | GTATCC | 1 cut(s) | 196 |
| BisI | GCNGC | 1 cut(s) | 549 |
| BlsI | GCNGC | 1 cut(s) | 550 |
| BmiI | GGNNCC | 1 cut(s) | 432 |
| BmsI | GCATC | 2 cut(s) | 170, 592 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 520, 552 |
| BpuEI | CTTGAG | 1 cut(s) | 398 |
| BsaJI | CCNNGG | 2 cut(s) | 165, 248 |
| BsaWI | WCCGGW | 1 cut(s) | 412 |
| Bse118I | RCCGGY | 1 cut(s) | 412 |
| Bse1I | ACTGG | 1 cut(s) | 408 |
| BseDI | CCNNGG | 2 cut(s) | 165, 248 |
| BseGI | GGATG | 3 cut(s) | 161, 277, 497 |
| BseNI | ACTGG | 1 cut(s) | 408 |
| BseRI | GAGGAG | 5 cut(s) | 102, 111, 114, 117, 120 |
| BseXI | GCAGC | 1 cut(s) | 560 |
| Bsh1236I | CGCG | 1 cut(s) | 239 |
| Bsh1285I | CGRYCG | 1 cut(s) | 413 |
| BshTI | ACCGGT | 1 cut(s) | 412 |
| BsiEI | CGRYCG | 1 cut(s) | 413 |
| BsiHKAI | GWGCWC | 1 cut(s) | 509 |
| BsiSI | CCGG | 1 cut(s) | 413 |
| Bsp1286I | GDGCHC | 2 cut(s) | 282, 509 |
| Bsp143I | GATC | 2 cut(s) | 28, 430 |
| Bsp19I | CCATGG | 1 cut(s) | 165 |
| BspFNI | CGCG | 1 cut(s) | 239 |
| BspHI | TCATGA | 1 cut(s) | 484 |
| BspLI | GGNNCC | 1 cut(s) | 432 |
| BspMI | ACCTGC | 1 cut(s) | 28 |
| BspPI | GGATC | 2 cut(s) | 425, 438 |
| BsrFI | RCCGGY | 1 cut(s) | 412 |
| BsrI | ACTGG | 1 cut(s) | 408 |
| BssAI | RCCGGY | 1 cut(s) | 412 |
| BssECI | CCNNGG | 2 cut(s) | 165, 248 |
| BssMI | GATC | 2 cut(s) | 28, 430 |
| BssT1I | CCWWGG | 1 cut(s) | 165 |
| Bst4CI | ACNGT | 1 cut(s) | 330 |
| Bst6I | CTCTTC | 1 cut(s) | 75 |
| BstC8I | GCNNGC | 1 cut(s) | 159 |
| BstDSI | CCRYGG | 1 cut(s) | 165 |
| BstF5I | GGATG | 3 cut(s) | 161, 277, 497 |
| BstFNI | CGCG | 1 cut(s) | 239 |
| BstKTI | GATC | 2 cut(s) | 31, 433 |
| BstMBI | GATC | 2 cut(s) | 28, 430 |
| BstMCI | CGRYCG | 1 cut(s) | 413 |
| BstNSI | RCATGY | 1 cut(s) | 443 |
| BstUI | CGCG | 1 cut(s) | 239 |
| BstV1I | GCAGC | 1 cut(s) | 560 |
| BstX2I | RGATCY | 1 cut(s) | 430 |
| BstYI | RGATCY | 1 cut(s) | 430 |
| BsuI | GTATCC | 1 cut(s) | 196 |
| BtgI | CCRYGG | 1 cut(s) | 165 |
| BtgZI | GCGATG | 1 cut(s) | 59 |
| BtsCI | GGATG | 3 cut(s) | 161, 277, 497 |
| BveI | ACCTGC | 1 cut(s) | 28 |
| Cac8I | GCNNGC | 1 cut(s) | 159 |
| CciI | TCATGA | 1 cut(s) | 484 |
| Cfr10I | RCCGGY | 1 cut(s) | 412 |
| CseI | GACGC | 1 cut(s) | 233 |
| Csp6I | GTAC | 2 cut(s) | 443, 518 |
| CspAI | ACCGGT | 1 cut(s) | 412 |
| CviAII | CATG | 4 cut(s) | 166, 268, 440, 485 |
| CviJI | RGCY | 7 cut(s) | 5, 224, 280, 310, 507, 536, 594 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 224, 280, 310, 507, 536, 594 |
| CviQI | GTAC | 2 cut(s) | 443, 518 |
| DpnI | GATC | 2 cut(s) | 30, 432 |
| DpnII | GATC | 2 cut(s) | 28, 430 |
| Eam1104I | CTCTTC | 1 cut(s) | 75 |
| EarI | CTCTTC | 1 cut(s) | 75 |
| Ecl136II | GAGCTC | 1 cut(s) | 507 |
| Eco130I | CCWWGG | 1 cut(s) | 165 |
| Eco24I | GRGCYC | 2 cut(s) | 282, 509 |
| Eco53kI | GAGCTC | 1 cut(s) | 507 |
| EcoICRI | GAGCTC | 1 cut(s) | 507 |
| EcoT14I | CCWWGG | 1 cut(s) | 165 |
| EcoT38I | GRGCYC | 2 cut(s) | 282, 509 |
| ErhI | CCWWGG | 1 cut(s) | 165 |
| FaeI | CATG | 4 cut(s) | 169, 271, 443, 488 |
| FaiI | YATR | 7 cut(s) | 167, 232, 269, 299, 441, 486, 604 |
| FatI | CATG | 4 cut(s) | 165, 267, 439, 484 |
| FbaI | TGATCA | 1 cut(s) | 28 |
| Fnu4HI | GCNGC | 1 cut(s) | 549 |
| FokI | GGATG | 3 cut(s) | 148, 284, 484 |
| FriOI | GRGCYC | 2 cut(s) | 282, 509 |
| Fsp4HI | GCNGC | 1 cut(s) | 549 |
| FspBI | CTAG | 2 cut(s) | 356, 591 |
| GluI | GCNGC | 1 cut(s) | 549 |
| HapII | CCGG | 1 cut(s) | 413 |
| HgaI | GACGC | 1 cut(s) | 233 |
| Hin1II | CATG | 4 cut(s) | 169, 271, 443, 488 |
| HindIII | AAGCTT | 1 cut(s) | 308 |
| HinfI | GANTC | 4 cut(s) | 255, 373, 389, 568 |
| HpaII | CCGG | 1 cut(s) | 413 |
| HphI | GGTGA | 1 cut(s) | 479 |
| Hpy166II | GTNNAC | 1 cut(s) | 567 |
| Hpy188I | TCNGA | 2 cut(s) | 249, 511 |
| Hpy188III | TCNNGA | 6 cut(s) | 303, 356, 370, 377, 485, 574 |
| Hpy8I | GTNNAC | 1 cut(s) | 567 |
| HpyAV | CCTTC | 3 cut(s) | 59, 80, 274 |
| HpyCH4III | ACNGT | 1 cut(s) | 330 |
| HpyCH4IV | ACGT | 1 cut(s) | 450 |
| HpyCH4V | TGCA | 1 cut(s) | 234 |
| HpySE526I | ACGT | 1 cut(s) | 450 |
| Hsp92II | CATG | 4 cut(s) | 169, 271, 443, 488 |
| Ksp22I | TGATCA | 1 cut(s) | 28 |
| Kzo9I | GATC | 2 cut(s) | 28, 430 |
| LmnI | GCTCC | 1 cut(s) | 124 |
| LpnPI | CCDG | 7 cut(s) | 23, 129, 334, 389, 426, 587, 593 |
| Lsp1109I | GCAGC | 1 cut(s) | 560 |
| LweI | GCATC | 2 cut(s) | 170, 592 |
| MaeI | CTAG | 2 cut(s) | 356, 591 |
| MaeII | ACGT | 1 cut(s) | 450 |
| MalI | GATC | 2 cut(s) | 30, 432 |
| MboI | GATC | 2 cut(s) | 28, 430 |
| MboII | GAAGA | 4 cut(s) | 67, 92, 138, 305 |
| MfeI | CAATTG | 1 cut(s) | 321 |
| MflI | RGATCY | 1 cut(s) | 430 |
| MhlI | GDGCHC | 2 cut(s) | 282, 509 |
| MluCI | AATT | 5 cut(s) | 214, 321, 336, 493, 553 |
| MluI | ACGCGT | 1 cut(s) | 237 |
| MlyI | GAGTC | 1 cut(s) | 562 |
| MseI | TTAA | 1 cut(s) | 17 |
| MslI | CAYNNNNRTG | 1 cut(s) | 266 |
| MspI | CCGG | 1 cut(s) | 413 |
| MunI | CAATTG | 1 cut(s) | 321 |
| MvnI | CGCG | 1 cut(s) | 239 |
| NcoI | CCATGG | 1 cut(s) | 165 |
| NdeII | GATC | 2 cut(s) | 28, 430 |
| NlaIII | CATG | 4 cut(s) | 169, 271, 443, 488 |
| NlaIV | GGNNCC | 1 cut(s) | 432 |
| NspI | RCATGY | 1 cut(s) | 443 |
| PagI | TCATGA | 1 cut(s) | 484 |
| PfeI | GAWTC | 3 cut(s) | 255, 373, 389 |
| PinAI | ACCGGT | 1 cut(s) | 412 |
| PkrI | GCNGC | 1 cut(s) | 550 |
| PleI | GAGTC | 1 cut(s) | 562 |
| PpsI | GAGTC | 1 cut(s) | 562 |
| Psp124BI | GAGCTC | 1 cut(s) | 509 |
| Psp1406I | AACGTT | 1 cut(s) | 450 |
| PspN4I | GGNNCC | 1 cut(s) | 432 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 435, 467 |
| PsuI | RGATCY | 1 cut(s) | 430 |
| RsaI | GTAC | 2 cut(s) | 444, 519 |
| RsaNI | GTAC | 2 cut(s) | 443, 518 |
| RseI | CAYNNNNRTG | 1 cut(s) | 266 |
| SacI | GAGCTC | 1 cut(s) | 509 |
| SaqAI | TTAA | 1 cut(s) | 17 |
| SatI | GCNGC | 1 cut(s) | 549 |
| Sau3AI | GATC | 2 cut(s) | 28, 430 |
| SchI | GAGTC | 1 cut(s) | 562 |
| SduI | GDGCHC | 2 cut(s) | 282, 509 |
| SetI | ASST | 6 cut(s) | 42, 266, 312, 453, 509, 538 |
| SfaNI | GCATC | 2 cut(s) | 170, 592 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 266 |
| SmlI | CTYRAG | 1 cut(s) | 377 |
| SmoI | CTYRAG | 1 cut(s) | 377 |
| Sse9I | AATT | 5 cut(s) | 214, 321, 336, 493, 553 |
| SspMI | CTAG | 2 cut(s) | 356, 591 |
| SstI | GAGCTC | 1 cut(s) | 509 |
| StyI | CCWWGG | 1 cut(s) | 165 |
| TaaI | ACNGT | 1 cut(s) | 330 |
| TaiI | ACGT | 1 cut(s) | 453 |
| TaqI | TCGA | 2 cut(s) | 194, 409 |
| TasI | AATT | 5 cut(s) | 214, 321, 336, 493, 553 |
| TatI | WGTACW | 1 cut(s) | 517 |
| TfiI | GAWTC | 3 cut(s) | 255, 373, 389 |
| Tru1I | TTAA | 1 cut(s) | 17 |
| Tru9I | TTAA | 1 cut(s) | 17 |
| TseI | GCWGC | 1 cut(s) | 548 |
| TspDTI | ATGAA | 4 cut(s) | 256, 375, 486, 501 |
| TspGWI | ACGGA | 1 cut(s) | 490 |
| XapI | RAATTY | 2 cut(s) | 336, 553 |
| XbaI | TCTAGA | 1 cut(s) | 355 |
| XceI | RCATGY | 1 cut(s) | 443 |
| XspI | CTAG | 2 cut(s) | 356, 591 |