TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 26 - 192 | 4.2e-56 | TIR domain |
| TIR_2 | PF13676 | 28 - 123 | 2.4e-14 | TIR domain |
| NB-ARC | PF00931 | 209 - 375 | 1.6e-15 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 449 - 519 | 6.7e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 707 - 905 | 4.6e-21 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 737 - 792 | 3.6e-07 | Leucine-rich repeat region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 536 |
| AarI | CACCTGC | 1 cut(s) | 3606 |
| AatII | GACGTC | 1 cut(s) | 2847 |
| Acc16I | TGCGCA | 1 cut(s) | 2493 |
| Acc36I | ACCTGC | 1 cut(s) | 3606 |
| AccB1I | GGYRCC | 1 cut(s) | 2222 |
| AccI | GTMKAC | 2 cut(s) | 1176, 3156 |
| AccII | CGCG | 1 cut(s) | 1548 |
| AciI | CCGC | 2 cut(s) | 1196, 1999 |
| AclWI | GGATC | 6 cut(s) | 248, 359, 372, 1658, 2027, 2934 |
| AcoI | YGGCCR | 1 cut(s) | 742 |
| AcuI | CTGAAG | 3 cut(s) | 822, 2424, 3527 |
| AcyI | GRCGYC | 1 cut(s) | 2844 |
| AfaI | GTAC | 6 cut(s) | 1219, 1231, 1458, 1727, 2014, 3496 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2042, 3074 |
| AflII | CTTAAG | 1 cut(s) | 1721 |
| AgeI | ACCGGT | 1 cut(s) | 3497 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3163 |
| AhlI | ACTAGT | 2 cut(s) | 568, 2944 |
| AjiI | CACGTC | 1 cut(s) | 2791 |
| AjnI | CCWGG | 2 cut(s) | 1567, 3651 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2972, 3004 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2850, 2882 |
| Alw21I | GWGCWC | 6 cut(s) | 145, 472, 1285, 2595, 3017, 3118 |
| Alw26I | GTCTC | 3 cut(s) | 189, 818, 2715 |
| AlwI | GGATC | 6 cut(s) | 248, 359, 372, 1658, 2027, 2934 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2480 |
| Ama87I | CYCGRG | 2 cut(s) | 1145, 2594 |
| AoxI | GGCC | 6 cut(s) | 127, 344, 742, 805, 2394, 3649 |
| ApeKI | GCWGC | 3 cut(s) | 2335, 3423, 3506 |
| AseI | ATTAAT | 2 cut(s) | 1734, 1740 |
| AsiGI | ACCGGT | 1 cut(s) | 3497 |
| AspA2I | CCTAGG | 1 cut(s) | 844 |
| AspLEI | GCGC | 1 cut(s) | 2494 |
| AspS9I | GGNCC | 3 cut(s) | 2652, 3262, 3500 |
| AsuHPI | GGTGA | 8 cut(s) | 113, 352, 413, 789, 1007, 3305, 3326, 3416 |
| AsuII | TTCGAA | 1 cut(s) | 151 |
| AsuNHI | GCTAGC | 1 cut(s) | 1198 |
| AvaI | CYCGRG | 2 cut(s) | 1145, 2594 |
| AvaII | GGWCC | 3 cut(s) | 2652, 3262, 3500 |
| AvrII | CCTAGG | 1 cut(s) | 844 |
| BalI | TGGCCA | 1 cut(s) | 744 |
| BamHI | GGATCC | 1 cut(s) | 364 |
| BanI | GGYRCC | 1 cut(s) | 2222 |
| BanII | GRGCYC | 1 cut(s) | 1474 |
| BbsI | GAAGAC | 4 cut(s) | 76, 713, 2546, 2609 |
| Bbv12I | GWGCWC | 6 cut(s) | 145, 472, 1285, 2595, 3017, 3118 |
| BbvI | GCAGC | 3 cut(s) | 2347, 3410, 3518 |
| BccI | CCATC | 9 cut(s) | 453, 1834, 2185, 2737, 2794, 3166, 3284, 3529, 3615 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1136, 1170, 2404, 2438 |
| BciT130I | CCWGG | 2 cut(s) | 1569, 3653 |
| BciVI | GTATCC | 1 cut(s) | 100 |
| BclI | TGATCA | 2 cut(s) | 2359, 3322 |
| BcoDI | GTCTC | 3 cut(s) | 189, 818, 2715 |
| BcuI | ACTAGT | 2 cut(s) | 568, 2944 |
| BfmI | CTRYAG | 5 cut(s) | 981, 2611, 3069, 3418, 3504 |
| BfrI | CTTAAG | 1 cut(s) | 1721 |
| BfuAI | ACCTGC | 1 cut(s) | 3606 |
| BfuI | GTATCC | 1 cut(s) | 100 |
| BglII | AGATCT | 2 cut(s) | 555, 2071 |
| BisI | GCNGC | 3 cut(s) | 2336, 3424, 3507 |
| BlnI | CCTAGG | 1 cut(s) | 844 |
| BlpI | GCTNAGC | 2 cut(s) | 414, 908 |
| BlsI | GCNGC | 3 cut(s) | 2337, 3425, 3508 |
| BmcAI | AGTACT | 2 cut(s) | 1458, 1727 |
| Bme1390I | CCNGG | 2 cut(s) | 1569, 3653 |
| Bme18I | GGWCC | 3 cut(s) | 2652, 3262, 3500 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3163 |
| BmeT110I | CYCGRG | 2 cut(s) | 1145, 2594 |
| BmgBI | CACGTC | 1 cut(s) | 2791 |
| BmgT120I | GGNCC | 3 cut(s) | 2652, 3262, 3500 |
| BmiI | GGNNCC | 4 cut(s) | 28, 366, 2224, 3263 |
| BmrFI | CCNGG | 2 cut(s) | 1569, 3653 |
| BmrI | ACTGGG | 1 cut(s) | 2225 |
| BmsI | GCATC | 6 cut(s) | 281, 1315, 2238, 2272, 2453, 2503 |
| BmtI | GCTAGC | 1 cut(s) | 1202 |
| BmuI | ACTGGG | 1 cut(s) | 2225 |
| BpiI | GAAGAC | 4 cut(s) | 76, 713, 2546, 2609 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3571, 3603 |
| Bpu10I | CCTNAGC | 2 cut(s) | 89, 3510 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 414, 908 |
| Bpu14I | TTCGAA | 1 cut(s) | 151 |
| BpuEI | CTTGAG | 2 cut(s) | 1708, 2147 |
| Bsa29I | ATCGAT | 2 cut(s) | 2249, 3051 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3327 |
| BsaHI | GRCGYC | 1 cut(s) | 2844 |
| BsaJI | CCNNGG | 4 cut(s) | 19, 844, 1568, 3616 |
| BsaWI | WCCGGW | 1 cut(s) | 3497 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 503, 533 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2042, 3074 |
| Bse118I | RCCGGY | 1 cut(s) | 3497 |
| Bse1I | ACTGG | 4 cut(s) | 347, 962, 1673, 2220 |
| Bse3DI | GCAATG | 4 cut(s) | 325, 877, 1362, 2362 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3327 |
| BseBI | CCWGG | 2 cut(s) | 1569, 3653 |
| BseCI | ATCGAT | 2 cut(s) | 2249, 3051 |
| BseDI | CCNNGG | 4 cut(s) | 19, 844, 1568, 3616 |
| BseJI | GATNNNNATC | 1 cut(s) | 3327 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2042, 3074 |
| BseMI | GCAATG | 4 cut(s) | 325, 877, 1362, 2362 |
| BseMII | CTCAG | 8 cut(s) | 80, 252, 588, 899, 1431, 1719, 2275, 2731 |
| BseNI | ACTGG | 4 cut(s) | 347, 962, 1673, 2220 |
| BseRI | GAGGAG | 5 cut(s) | 22, 39, 207, 478, 3579 |
| BseXI | GCAGC | 3 cut(s) | 2347, 3410, 3518 |
| BsgI | GTGCAG | 3 cut(s) | 2278, 3578, 3596 |
| Bsh1236I | CGCG | 1 cut(s) | 1548 |
| BshFI | GGCC | 6 cut(s) | 129, 346, 744, 807, 2396, 3651 |
| BshNI | GGYRCC | 1 cut(s) | 2222 |
| BshTI | ACCGGT | 1 cut(s) | 3497 |
| BshVI | ATCGAT | 2 cut(s) | 2249, 3051 |
| BsiHKAI | GWGCWC | 6 cut(s) | 145, 472, 1285, 2595, 3017, 3118 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1145, 2594 |
| BsiSI | CCGG | 1 cut(s) | 3498 |
| BslFI | GGGAC | 4 cut(s) | 44, 604, 3552, 3596 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2042, 3074 |
| BsmAI | GTCTC | 3 cut(s) | 189, 818, 2715 |
| BsmBI | CGTCTC | 1 cut(s) | 189 |
| BsmFI | GGGAC | 4 cut(s) | 44, 604, 3552, 3596 |
| BsnI | GGCC | 6 cut(s) | 129, 346, 744, 807, 2396, 3651 |
| BsoBI | CYCGRG | 2 cut(s) | 1145, 2594 |
| Bsp119I | TTCGAA | 1 cut(s) | 151 |
| Bsp1286I | GDGCHC | 7 cut(s) | 145, 472, 1285, 1474, 2595, 3017, 3118 |
| Bsp1407I | TGTACA | 1 cut(s) | 2012 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 414, 908 |
| Bsp68I | TCGCGA | 1 cut(s) | 1548 |
| BspACI | CCGC | 2 cut(s) | 1196, 1999 |
| BspANI | GGCC | 6 cut(s) | 129, 346, 744, 807, 2396, 3651 |
| BspCNI | CTCAG | 8 cut(s) | 81, 253, 589, 900, 1432, 1718, 2274, 2730 |
| BspDI | ATCGAT | 2 cut(s) | 2249, 3051 |
| BspFNI | CGCG | 1 cut(s) | 1548 |
| BspHI | TCATGA | 1 cut(s) | 3079 |
| BspLI | GGNNCC | 4 cut(s) | 28, 366, 2224, 3263 |
| BspMAI | CTGCAG | 2 cut(s) | 3073, 3508 |
| BspMI | ACCTGC | 1 cut(s) | 3606 |
| BspOI | GCTAGC | 1 cut(s) | 1202 |
| BspPI | GGATC | 6 cut(s) | 248, 359, 372, 1658, 2027, 2934 |
| BspT104I | TTCGAA | 1 cut(s) | 151 |
| BspT107I | GGYRCC | 1 cut(s) | 2222 |
| BspTI | CTTAAG | 1 cut(s) | 1721 |
| BsrDI | GCAATG | 4 cut(s) | 325, 877, 1362, 2362 |
| BsrFI | RCCGGY | 1 cut(s) | 3497 |
| BsrGI | TGTACA | 1 cut(s) | 2012 |
| BsrI | ACTGG | 4 cut(s) | 347, 962, 1673, 2220 |
| BssAI | RCCGGY | 1 cut(s) | 3497 |
| BssECI | CCNNGG | 4 cut(s) | 19, 844, 1568, 3616 |
| BssNI | GRCGYC | 1 cut(s) | 2844 |
| BssT1I | CCWWGG | 3 cut(s) | 19, 844, 3616 |
| Bst2UI | CCWGG | 2 cut(s) | 1569, 3653 |
| Bst4CI | ACNGT | 5 cut(s) | 140, 210, 618, 2615, 2885 |
| Bst6I | CTCTTC | 8 cut(s) | 40, 225, 546, 834, 1545, 3405, 3441, 3447 |
| BstACI | GRCGYC | 1 cut(s) | 2844 |
| BstAFI | CTTAAG | 1 cut(s) | 1721 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1516, 3113 |
| BstAUI | TGTACA | 1 cut(s) | 2012 |
| BstBI | TTCGAA | 1 cut(s) | 151 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3072 |
| BstFNI | CGCG | 1 cut(s) | 1548 |
| BstHHI | GCGC | 1 cut(s) | 2494 |
| BstMAI | GTCTC | 3 cut(s) | 189, 818, 2715 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1516, 1864, 2801, 3113 |
| BstNI | CCWGG | 2 cut(s) | 1569, 3653 |
| BstNSI | RCATGY | 1 cut(s) | 1371 |
| BstSCI | CCNGG | 2 cut(s) | 1567, 3651 |
| BstSFI | CTRYAG | 5 cut(s) | 981, 2611, 3069, 3418, 3504 |
| BstUI | CGCG | 1 cut(s) | 1548 |
| BstV1I | GCAGC | 3 cut(s) | 2347, 3410, 3518 |
| BstV2I | GAAGAC | 4 cut(s) | 76, 713, 2546, 2609 |
| BstX2I | RGATCY | 4 cut(s) | 240, 364, 555, 2071 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 2443, 2662, 3272 |
| BstYI | RGATCY | 4 cut(s) | 240, 364, 555, 2071 |
| Bsu15I | ATCGAT | 2 cut(s) | 2249, 3051 |
| BsuI | GTATCC | 1 cut(s) | 100 |
| BsuRI | GGCC | 6 cut(s) | 129, 346, 744, 807, 2396, 3651 |
| BsuTUI | ATCGAT | 2 cut(s) | 2249, 3051 |
| BtrI | CACGTC | 1 cut(s) | 2791 |
| BtsI | GCAGTG | 2 cut(s) | 313, 3114 |
| BtsIMutI | CAGTG | 7 cut(s) | 145, 313, 1193, 1202, 1560, 2269, 3114 |
| BtuMI | TCGCGA | 1 cut(s) | 1548 |
| BveI | ACCTGC | 1 cut(s) | 3606 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2480 |
| CciI | TCATGA | 1 cut(s) | 3079 |
| CfoI | GCGC | 1 cut(s) | 2494 |
| Cfr10I | RCCGGY | 1 cut(s) | 3497 |
| Cfr13I | GGNCC | 3 cut(s) | 2652, 3262, 3500 |
| ClaI | ATCGAT | 2 cut(s) | 2249, 3051 |
| Csp6I | GTAC | 6 cut(s) | 1218, 1230, 1457, 1726, 2013, 3495 |
| CspAI | ACCGGT | 1 cut(s) | 3497 |
| CviQI | GTAC | 6 cut(s) | 1218, 1230, 1457, 1726, 2013, 3495 |
| DraI | TTTAAA | 1 cut(s) | 2451 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3163 |
| EaeI | YGGCCR | 1 cut(s) | 742 |
| Eam1104I | CTCTTC | 8 cut(s) | 40, 225, 546, 834, 1545, 3405, 3441, 3447 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3163 |
| EarI | CTCTTC | 8 cut(s) | 40, 225, 546, 834, 1545, 3405, 3441, 3447 |
| Eco130I | CCWWGG | 3 cut(s) | 19, 844, 3616 |
| Eco147I | AGGCCT | 1 cut(s) | 807 |
| Eco24I | GRGCYC | 1 cut(s) | 1474 |
| Eco32I | GATATC | 2 cut(s) | 841, 1760 |
| Eco47I | GGWCC | 3 cut(s) | 2652, 3262, 3500 |
| Eco57I | CTGAAG | 3 cut(s) | 822, 2424, 3527 |
| Eco88I | CYCGRG | 2 cut(s) | 1145, 2594 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3072 |
| EcoRI | GAATTC | 3 cut(s) | 1946, 2195, 3641 |
| EcoRII | CCWGG | 2 cut(s) | 1567, 3651 |
| EcoRV | GATATC | 2 cut(s) | 841, 1760 |
| EcoT14I | CCWWGG | 3 cut(s) | 19, 844, 3616 |
| EcoT22I | ATGCAT | 5 cut(s) | 274, 1330, 1512, 2567, 2812 |
| EcoT38I | GRGCYC | 1 cut(s) | 1474 |
| ErhI | CCWWGG | 3 cut(s) | 19, 844, 3616 |
| Esp3I | CGTCTC | 1 cut(s) | 189 |
| FaqI | GGGAC | 4 cut(s) | 44, 604, 3552, 3596 |
| FauNDI | CATATG | 2 cut(s) | 76, 2806 |
| FbaI | TGATCA | 2 cut(s) | 2359, 3322 |
| FblI | GTMKAC | 2 cut(s) | 1176, 3156 |
| Fnu4HI | GCNGC | 3 cut(s) | 2336, 3424, 3507 |
| FriOI | GRGCYC | 1 cut(s) | 1474 |
| Fsp4HI | GCNGC | 3 cut(s) | 2336, 3424, 3507 |
| FspI | TGCGCA | 1 cut(s) | 2493 |
| GlaI | GCGC | 1 cut(s) | 2493 |
| GluI | GCNGC | 3 cut(s) | 2336, 3424, 3507 |
| HaeIII | GGCC | 6 cut(s) | 129, 346, 744, 807, 2396, 3651 |
| HapII | CCGG | 1 cut(s) | 3498 |
| HhaI | GCGC | 1 cut(s) | 2494 |
| Hin1I | GRCGYC | 1 cut(s) | 2844 |
| Hin6I | GCGC | 1 cut(s) | 2492 |
| HinP1I | GCGC | 1 cut(s) | 2492 |
| HincII | GTYRAC | 4 cut(s) | 814, 1177, 1920, 2581 |
| HindII | GTYRAC | 4 cut(s) | 814, 1177, 1920, 2581 |
| HindIII | AAGCTT | 5 cut(s) | 1684, 1699, 2057, 2275, 2438 |
| HpaII | CCGG | 1 cut(s) | 3498 |
| HphI | GGTGA | 8 cut(s) | 113, 352, 413, 789, 1007, 3305, 3326, 3416 |
| Hpy99I | CGWCG | 1 cut(s) | 2849 |
| HpyCH4III | ACNGT | 5 cut(s) | 140, 210, 618, 2615, 2885 |
| HpyCH4IV | ACGT | 4 cut(s) | 667, 1182, 2790, 2844 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1516, 1864, 2801, 3113 |
| HpySE526I | ACGT | 4 cut(s) | 667, 1182, 2790, 2844 |
| Hsp92I | GRCGYC | 1 cut(s) | 2844 |
| HspAI | GCGC | 1 cut(s) | 2492 |
| Ksp22I | TGATCA | 2 cut(s) | 2359, 3322 |
| LmnI | GCTCC | 5 cut(s) | 26, 511, 1002, 1288, 1573 |
| Lsp1109I | GCAGC | 3 cut(s) | 2347, 3410, 3518 |
| LweI | GCATC | 6 cut(s) | 281, 1315, 2238, 2272, 2453, 2503 |
| MaeII | ACGT | 4 cut(s) | 667, 1182, 2790, 2844 |
| MaeIII | GTNAC | 7 cut(s) | 795, 1015, 2377, 2771, 3314, 3524, 3620 |
| MfeI | CAATTG | 5 cut(s) | 606, 714, 738, 2149, 2207 |
| MflI | RGATCY | 4 cut(s) | 240, 364, 555, 2071 |
| MhlI | GDGCHC | 7 cut(s) | 145, 472, 1285, 1474, 2595, 3017, 3118 |
| MlsI | TGGCCA | 1 cut(s) | 744 |
| MluNI | TGGCCA | 1 cut(s) | 744 |
| MlyI | GAGTC | 4 cut(s) | 242, 820, 1017, 1562 |
| MmeI | TCCRAC | 2 cut(s) | 2023, 3618 |
| Mox20I | TGGCCA | 1 cut(s) | 744 |
| Mph1103I | ATGCAT | 5 cut(s) | 274, 1330, 1512, 2567, 2812 |
| MscI | TGGCCA | 1 cut(s) | 744 |
| MslI | CAYNNNNRTG | 7 cut(s) | 280, 318, 1599, 2660, 3288, 3432, 3533 |
| Msp20I | TGGCCA | 1 cut(s) | 744 |
| MspCI | CTTAAG | 1 cut(s) | 1721 |
| MspI | CCGG | 1 cut(s) | 3498 |
| MspR9I | CCNGG | 2 cut(s) | 1569, 3653 |
| MunI | CAATTG | 5 cut(s) | 606, 714, 738, 2149, 2207 |
| MvaI | CCWGG | 2 cut(s) | 1569, 3653 |
| MvnI | CGCG | 1 cut(s) | 1548 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1516, 1864, 2801, 3113 |
| NdeI | CATATG | 2 cut(s) | 76, 2806 |
| NheI | GCTAGC | 1 cut(s) | 1198 |
| NlaIV | GGNNCC | 4 cut(s) | 28, 366, 2224, 3263 |
| NmuCI | GTSAC | 4 cut(s) | 795, 2771, 3314, 3524 |
| NruI | TCGCGA | 1 cut(s) | 1548 |
| NsbI | TGCGCA | 1 cut(s) | 2493 |
| NsiI | ATGCAT | 5 cut(s) | 274, 1330, 1512, 2567, 2812 |
| NspI | RCATGY | 1 cut(s) | 1371 |
| NspV | TTCGAA | 1 cut(s) | 151 |
| PaeR7I | CTCGAG | 2 cut(s) | 1145, 2594 |
| PagI | TCATGA | 1 cut(s) | 3079 |
| PaqCI | CACCTGC | 1 cut(s) | 3606 |
| PceI | AGGCCT | 1 cut(s) | 807 |
| PinAI | ACCGGT | 1 cut(s) | 3497 |
| PkrI | GCNGC | 3 cut(s) | 2337, 3425, 3508 |
| PleI | GAGTC | 4 cut(s) | 241, 820, 1016, 1561 |
| PpsI | GAGTC | 4 cut(s) | 241, 820, 1016, 1561 |
| PshBI | ATTAAT | 2 cut(s) | 1734, 1740 |
| PsiI | TTATAA | 1 cut(s) | 536 |
| Psp6I | CCWGG | 2 cut(s) | 1567, 3651 |
| PspGI | CCWGG | 2 cut(s) | 1567, 3651 |
| PspN4I | GGNNCC | 4 cut(s) | 28, 366, 2224, 3263 |
| PspPI | GGNCC | 3 cut(s) | 2652, 3262, 3500 |
| PspXI | VCTCGAGB | 2 cut(s) | 1145, 2594 |
| PstI | CTGCAG | 2 cut(s) | 3073, 3508 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2480 |
| PsuI | RGATCY | 4 cut(s) | 240, 364, 555, 2071 |
| RruI | TCGCGA | 1 cut(s) | 1548 |
| RsaI | GTAC | 6 cut(s) | 1219, 1231, 1458, 1727, 2014, 3496 |
| RsaNI | GTAC | 6 cut(s) | 1218, 1230, 1457, 1726, 2013, 3495 |
| RseI | CAYNNNNRTG | 7 cut(s) | 280, 318, 1599, 2660, 3288, 3432, 3533 |
| SalI | GTCGAC | 1 cut(s) | 1175 |
| SatI | GCNGC | 3 cut(s) | 2336, 3424, 3507 |
| Sau96I | GGNCC | 3 cut(s) | 2652, 3262, 3500 |
| ScaI | AGTACT | 2 cut(s) | 1458, 1727 |
| SchI | GAGTC | 4 cut(s) | 242, 820, 1017, 1562 |
| ScrFI | CCNGG | 2 cut(s) | 1569, 3653 |
| SduI | GDGCHC | 7 cut(s) | 145, 472, 1285, 1474, 2595, 3017, 3118 |
| SfaNI | GCATC | 6 cut(s) | 281, 1315, 2238, 2272, 2453, 2503 |
| SfcI | CTRYAG | 5 cut(s) | 981, 2611, 3069, 3418, 3504 |
| Sfr274I | CTCGAG | 2 cut(s) | 1145, 2594 |
| SfuI | TTCGAA | 1 cut(s) | 151 |
| SinI | GGWCC | 3 cut(s) | 2652, 3262, 3500 |
| SlaI | CTCGAG | 2 cut(s) | 1145, 2594 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 280, 318, 1599, 2660, 3288, 3432, 3533 |
| SmlI | CTYRAG | 5 cut(s) | 1145, 1687, 1721, 2162, 2594 |
| SmoI | CTYRAG | 5 cut(s) | 1145, 1687, 1721, 2162, 2594 |
| SpeI | ACTAGT | 2 cut(s) | 568, 2944 |
| SseBI | AGGCCT | 1 cut(s) | 807 |
| SsiI | CCGC | 2 cut(s) | 1196, 1999 |
| SspI | AATATT | 2 cut(s) | 1627, 1738 |
| StuI | AGGCCT | 1 cut(s) | 807 |
| StyD4I | CCNGG | 2 cut(s) | 1567, 3651 |
| StyI | CCWWGG | 3 cut(s) | 19, 844, 3616 |
| TaaI | ACNGT | 5 cut(s) | 140, 210, 618, 2615, 2885 |
| TaiI | ACGT | 4 cut(s) | 670, 1185, 2793, 2847 |
| TaqII | GACCGA | 1 cut(s) | 235 |
| TatI | WGTACW | 3 cut(s) | 1456, 1725, 2012 |
| TscAI | CASTG | 7 cut(s) | 145, 320, 1193, 1209, 1567, 2269, 3114 |
| TseFI | GTSAC | 4 cut(s) | 795, 2771, 3314, 3524 |
| TseI | GCWGC | 3 cut(s) | 2335, 3423, 3506 |
| Tsp45I | GTSAC | 4 cut(s) | 795, 2771, 3314, 3524 |
| TspGWI | ACGGA | 3 cut(s) | 3032, 3467, 3624 |
| TspRI | CASTG | 7 cut(s) | 145, 320, 1193, 1209, 1567, 2269, 3114 |
| Vha464I | CTTAAG | 1 cut(s) | 1721 |
| VpaK11BI | GGWCC | 3 cut(s) | 2652, 3262, 3500 |
| VspI | ATTAAT | 2 cut(s) | 1734, 1740 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3072 |
| XbaI | TCTAGA | 1 cut(s) | 769 |
| XceI | RCATGY | 1 cut(s) | 1371 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 286 |
| XhoI | CTCGAG | 2 cut(s) | 1145, 2594 |
| XmaJI | CCTAGG | 1 cut(s) | 844 |
| XmiI | GTMKAC | 2 cut(s) | 1176, 3156 |
| ZraI | GACGTC | 1 cut(s) | 2845 |
| ZrmI | AGTACT | 2 cut(s) | 1458, 1727 |
| Zsp2I | ATGCAT | 5 cut(s) | 274, 1330, 1512, 2567, 2812 |