TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 17 - 180 | 2.3e-53 | TIR domain |
| TIR_2 | PF13676 | 19 - 114 | 8.8e-16 | TIR domain |
| NB-ARC | PF00931 | 199 - 367 | 6.1e-22 | NB-ARC domain |
| NACHT | PF05729 | 217 - 360 | 1.3e-07 | NACHT domain |
| AAA_22 | PF13401 | 219 - 317 | 7e-06 | AAA domain |
| LRR_13 | PF23286 | 510 - 742 | 2.6e-17 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 705 |
| AccB1I | GGYRCC | 1 cut(s) | 551 |
| AccIII | TCCGGA | 2 cut(s) | 1382, 2032 |
| AclWI | GGATC | 3 cut(s) | 332, 345, 1527 |
| AcoI | YGGCCR | 3 cut(s) | 3, 567, 2327 |
| AcuI | CTGAAG | 5 cut(s) | 377, 969, 1152, 1863, 2261 |
| AfaI | GTAC | 7 cut(s) | 351, 543, 600, 1134, 1284, 1410, 1723 |
| AfeI | AGCGCT | 1 cut(s) | 186 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1542 |
| AflIII | ACRYGT | 1 cut(s) | 1138 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 476 |
| AjnI | CCWGG | 3 cut(s) | 741, 2305, 2329 |
| Alw21I | GWGCWC | 4 cut(s) | 273, 429, 445, 1496 |
| AlwI | GGATC | 3 cut(s) | 332, 345, 1527 |
| Ama87I | CYCGRG | 1 cut(s) | 1571 |
| Aor13HI | TCCGGA | 2 cut(s) | 1382, 2032 |
| Aor51HI | AGCGCT | 1 cut(s) | 186 |
| AoxI | GGCC | 5 cut(s) | 3, 567, 778, 1159, 2327 |
| ApeKI | GCWGC | 1 cut(s) | 1855 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 105, 137, 1106, 1138 |
| AseI | ATTAAT | 1 cut(s) | 816 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2274 |
| AspLEI | GCGC | 1 cut(s) | 187 |
| AspS9I | GGNCC | 1 cut(s) | 1042 |
| AsuHPI | GGTGA | 5 cut(s) | 143, 619, 977, 1787, 1825 |
| AsuII | TTCGAA | 1 cut(s) | 1125 |
| AvaI | CYCGRG | 1 cut(s) | 1571 |
| AvaII | GGWCC | 1 cut(s) | 1042 |
| BalI | TGGCCA | 2 cut(s) | 569, 2329 |
| BamHI | GGATCC | 1 cut(s) | 337 |
| BanI | GGYRCC | 1 cut(s) | 551 |
| BanII | GRGCYC | 2 cut(s) | 273, 445 |
| BauI | CACGAG | 2 cut(s) | 162, 1790 |
| BbsI | GAAGAC | 1 cut(s) | 2021 |
| Bbv12I | GWGCWC | 4 cut(s) | 273, 429, 445, 1496 |
| BbvI | GCAGC | 1 cut(s) | 1842 |
| BccI | CCATC | 4 cut(s) | 542, 623, 1597, 2356 |
| BceAI | ACGGC | 1 cut(s) | 1146 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 30, 1552, 1586 |
| BciT130I | CCWGG | 3 cut(s) | 743, 2307, 2331 |
| BclI | TGATCA | 2 cut(s) | 148, 981 |
| BfaI | CTAG | 1 cut(s) | 182 |
| BfoI | RGCGCY | 1 cut(s) | 188 |
| BglII | AGATCT | 2 cut(s) | 528, 1753 |
| BisI | GCNGC | 1 cut(s) | 1856 |
| BlsI | GCNGC | 1 cut(s) | 1857 |
| BmcAI | AGTACT | 2 cut(s) | 543, 1284 |
| Bme1390I | CCNGG | 3 cut(s) | 743, 2307, 2331 |
| Bme18I | GGWCC | 1 cut(s) | 1042 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 476 |
| BmeT110I | CYCGRG | 1 cut(s) | 1571 |
| BmgT120I | GGNCC | 1 cut(s) | 1042 |
| BmiI | GGNNCC | 2 cut(s) | 339, 553 |
| BmrFI | CCNGG | 3 cut(s) | 743, 2307, 2331 |
| BmrI | ACTGGG | 1 cut(s) | 1315 |
| BmsI | GCATC | 3 cut(s) | 254, 1928, 2175 |
| BmuI | ACTGGG | 1 cut(s) | 1315 |
| BpiI | GAAGAC | 1 cut(s) | 2021 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 427, 459 |
| BpmI | CTGGAG | 2 cut(s) | 1091, 1095 |
| Bpu14I | TTCGAA | 1 cut(s) | 1125 |
| BpuEI | CTTGAG | 2 cut(s) | 1140, 2210 |
| BsaWI | WCCGGW | 2 cut(s) | 1382, 2032 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 171, 201 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1542 |
| Bse1I | ACTGG | 2 cut(s) | 320, 1310 |
| BseAI | TCCGGA | 2 cut(s) | 1382, 2032 |
| BseBI | CCWGG | 3 cut(s) | 743, 2307, 2331 |
| BseGI | GGATG | 4 cut(s) | 925, 1315, 1943, 2149 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1542 |
| BseMII | CTCAG | 1 cut(s) | 546 |
| BseNI | ACTGG | 2 cut(s) | 320, 1310 |
| BseRI | GAGGAG | 4 cut(s) | 87, 179, 180, 451 |
| BseXI | GCAGC | 1 cut(s) | 1842 |
| BshFI | GGCC | 5 cut(s) | 5, 569, 780, 1161, 2329 |
| BshNI | GGYRCC | 1 cut(s) | 551 |
| BsiHKAI | GWGCWC | 4 cut(s) | 273, 429, 445, 1496 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1571 |
| BsiSI | CCGG | 2 cut(s) | 1383, 2033 |
| BslFI | GGGAC | 2 cut(s) | 328, 676 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1542 |
| BsmFI | GGGAC | 2 cut(s) | 328, 676 |
| BsmI | GAATGC | 3 cut(s) | 1093, 1784, 1858 |
| BsnI | GGCC | 5 cut(s) | 5, 569, 780, 1161, 2329 |
| BsoBI | CYCGRG | 1 cut(s) | 1571 |
| Bsp119I | TTCGAA | 1 cut(s) | 1125 |
| Bsp1286I | GDGCHC | 4 cut(s) | 273, 429, 445, 1496 |
| Bsp13I | TCCGGA | 2 cut(s) | 1382, 2032 |
| BspANI | GGCC | 5 cut(s) | 5, 569, 780, 1161, 2329 |
| BspCNI | CTCAG | 1 cut(s) | 545 |
| BspEI | TCCGGA | 2 cut(s) | 1382, 2032 |
| BspLI | GGNNCC | 2 cut(s) | 339, 553 |
| BspPI | GGATC | 3 cut(s) | 332, 345, 1527 |
| BspT104I | TTCGAA | 1 cut(s) | 1125 |
| BspT107I | GGYRCC | 1 cut(s) | 551 |
| BsrI | ACTGG | 2 cut(s) | 320, 1310 |
| BssSI | CACGAG | 2 cut(s) | 162, 1790 |
| Bst2BI | CACGAG | 2 cut(s) | 162, 1790 |
| Bst2UI | CCWGG | 3 cut(s) | 743, 2307, 2331 |
| Bst4CI | ACNGT | 1 cut(s) | 1282 |
| Bst6I | CTCTTC | 5 cut(s) | 25, 198, 807, 1587, 2280 |
| BstBI | TTCGAA | 1 cut(s) | 1125 |
| BstC8I | GCNNGC | 2 cut(s) | 1996, 2283 |
| BstF5I | GGATG | 4 cut(s) | 925, 1315, 1943, 2149 |
| BstH2I | RGCGCY | 1 cut(s) | 188 |
| BstHHI | GCGC | 1 cut(s) | 187 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1248, 2130, 2185 |
| BstNI | CCWGG | 3 cut(s) | 743, 2307, 2331 |
| BstSCI | CCNGG | 3 cut(s) | 741, 2305, 2329 |
| BstV1I | GCAGC | 1 cut(s) | 1842 |
| BstV2I | GAAGAC | 1 cut(s) | 2021 |
| BstX2I | RGATCY | 4 cut(s) | 337, 528, 1532, 1753 |
| BstYI | RGATCY | 4 cut(s) | 337, 528, 1532, 1753 |
| BsuRI | GGCC | 5 cut(s) | 5, 569, 780, 1161, 2329 |
| BtgZI | GCGATG | 1 cut(s) | 2244 |
| BtsCI | GGATG | 4 cut(s) | 925, 1315, 1943, 2149 |
| BtsIMutI | CAGTG | 1 cut(s) | 2359 |
| Cac8I | GCNNGC | 2 cut(s) | 1996, 2283 |
| CfoI | GCGC | 1 cut(s) | 187 |
| Cfr13I | GGNCC | 1 cut(s) | 1042 |
| Csp6I | GTAC | 7 cut(s) | 350, 542, 599, 1133, 1283, 1409, 1722 |
| CviAII | CATG | 4 cut(s) | 42, 347, 430, 773 |
| CviQI | GTAC | 7 cut(s) | 350, 542, 599, 1133, 1283, 1409, 1722 |
| DriI | GACNNNNNGTC | 1 cut(s) | 476 |
| EaeI | YGGCCR | 3 cut(s) | 3, 567, 2327 |
| Eam1104I | CTCTTC | 5 cut(s) | 25, 198, 807, 1587, 2280 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 476 |
| EarI | CTCTTC | 5 cut(s) | 25, 198, 807, 1587, 2280 |
| Ecl136II | GAGCTC | 2 cut(s) | 271, 443 |
| Eco147I | AGGCCT | 1 cut(s) | 780 |
| Eco24I | GRGCYC | 2 cut(s) | 273, 445 |
| Eco47I | GGWCC | 1 cut(s) | 1042 |
| Eco47III | AGCGCT | 1 cut(s) | 186 |
| Eco53kI | GAGCTC | 2 cut(s) | 271, 443 |
| Eco57I | CTGAAG | 5 cut(s) | 377, 969, 1152, 1863, 2261 |
| Eco88I | CYCGRG | 1 cut(s) | 1571 |
| EcoICRI | GAGCTC | 2 cut(s) | 271, 443 |
| EcoRII | CCWGG | 3 cut(s) | 741, 2305, 2329 |
| EcoT22I | ATGCAT | 1 cut(s) | 247 |
| EcoT38I | GRGCYC | 2 cut(s) | 273, 445 |
| FaeI | CATG | 4 cut(s) | 45, 350, 433, 776 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 884, 916 |
| FaqI | GGGAC | 2 cut(s) | 328, 676 |
| FatI | CATG | 4 cut(s) | 41, 346, 429, 772 |
| FbaI | TGATCA | 2 cut(s) | 148, 981 |
| Fnu4HI | GCNGC | 1 cut(s) | 1856 |
| FokI | GGATG | 4 cut(s) | 932, 1322, 1950, 2156 |
| FriOI | GRGCYC | 2 cut(s) | 273, 445 |
| Fsp4HI | GCNGC | 1 cut(s) | 1856 |
| FspBI | CTAG | 1 cut(s) | 182 |
| GlaI | GCGC | 1 cut(s) | 186 |
| GluI | GCNGC | 1 cut(s) | 1856 |
| GsuI | CTGGAG | 2 cut(s) | 1091, 1095 |
| HaeII | RGCGCY | 1 cut(s) | 188 |
| HaeIII | GGCC | 5 cut(s) | 5, 569, 780, 1161, 2329 |
| HapII | CCGG | 2 cut(s) | 1383, 2033 |
| HhaI | GCGC | 1 cut(s) | 187 |
| Hin1II | CATG | 4 cut(s) | 45, 350, 433, 776 |
| Hin6I | GCGC | 1 cut(s) | 185 |
| HinP1I | GCGC | 1 cut(s) | 185 |
| HincII | GTYRAC | 2 cut(s) | 2056, 2205 |
| HindII | GTYRAC | 2 cut(s) | 2056, 2205 |
| HindIII | AAGCTT | 3 cut(s) | 114, 1499, 2122 |
| HpaII | CCGG | 2 cut(s) | 1383, 2033 |
| HphI | GGTGA | 5 cut(s) | 143, 619, 977, 1787, 1825 |
| Hpy166II | GTNNAC | 7 cut(s) | 384, 1329, 1474, 1711, 1768, 2056, 2205 |
| Hpy188I | TCNGA | 6 cut(s) | 539, 1046, 1346, 1758, 1882, 1951 |
| Hpy8I | GTNNAC | 7 cut(s) | 384, 1329, 1474, 1711, 1768, 2056, 2205 |
| Hpy99I | CGWCG | 1 cut(s) | 1064 |
| HpyAV | CCTTC | 9 cut(s) | 48, 151, 415, 482, 722, 1176, 1665, 1916, 2123 |
| HpyCH4III | ACNGT | 1 cut(s) | 1282 |
| HpyCH4IV | ACGT | 1 cut(s) | 1138 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1248, 2130, 2185 |
| HpySE526I | ACGT | 1 cut(s) | 1138 |
| Hsp92II | CATG | 4 cut(s) | 45, 350, 433, 776 |
| HspAI | GCGC | 1 cut(s) | 185 |
| Kpn2I | TCCGGA | 2 cut(s) | 1382, 2032 |
| Ksp22I | TGATCA | 2 cut(s) | 148, 981 |
| LmnI | GCTCC | 3 cut(s) | 192, 928, 1072 |
| Lsp1109I | GCAGC | 1 cut(s) | 1842 |
| LweI | GCATC | 3 cut(s) | 254, 1928, 2175 |
| MaeI | CTAG | 1 cut(s) | 182 |
| MaeII | ACGT | 1 cut(s) | 1138 |
| MaeIII | GTNAC | 2 cut(s) | 512, 1792 |
| MfeI | CAATTG | 5 cut(s) | 198, 687, 711, 1662, 2254 |
| MflI | RGATCY | 4 cut(s) | 337, 528, 1532, 1753 |
| MhlI | GDGCHC | 4 cut(s) | 273, 429, 445, 1496 |
| MlsI | TGGCCA | 2 cut(s) | 569, 2329 |
| MluNI | TGGCCA | 2 cut(s) | 569, 2329 |
| MlyI | GAGTC | 1 cut(s) | 215 |
| MmeI | TCCRAC | 2 cut(s) | 562, 1432 |
| Mox20I | TGGCCA | 2 cut(s) | 569, 2329 |
| Mph1103I | ATGCAT | 1 cut(s) | 247 |
| MroI | TCCGGA | 2 cut(s) | 1382, 2032 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2274 |
| MscI | TGGCCA | 2 cut(s) | 569, 2329 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1740 |
| Msp20I | TGGCCA | 2 cut(s) | 569, 2329 |
| MspI | CCGG | 2 cut(s) | 1383, 2033 |
| MspR9I | CCNGG | 3 cut(s) | 743, 2307, 2331 |
| MunI | CAATTG | 5 cut(s) | 198, 687, 711, 1662, 2254 |
| Mva1269I | GAATGC | 3 cut(s) | 1093, 1784, 1858 |
| MvaI | CCWGG | 3 cut(s) | 743, 2307, 2331 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1248, 2130, 2185 |
| NlaIII | CATG | 4 cut(s) | 45, 350, 433, 776 |
| NlaIV | GGNNCC | 2 cut(s) | 339, 553 |
| NmuCI | GTSAC | 1 cut(s) | 1792 |
| NsiI | ATGCAT | 1 cut(s) | 247 |
| NspV | TTCGAA | 1 cut(s) | 1125 |
| PaeR7I | CTCGAG | 1 cut(s) | 1571 |
| PceI | AGGCCT | 1 cut(s) | 780 |
| PctI | GAATGC | 3 cut(s) | 1093, 1784, 1858 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2274 |
| PkrI | GCNGC | 1 cut(s) | 1857 |
| PleI | GAGTC | 1 cut(s) | 214 |
| PpsI | GAGTC | 1 cut(s) | 214 |
| PshBI | ATTAAT | 1 cut(s) | 816 |
| PsiI | TTATAA | 1 cut(s) | 705 |
| Psp124BI | GAGCTC | 2 cut(s) | 273, 445 |
| Psp6I | CCWGG | 3 cut(s) | 741, 2305, 2329 |
| PspGI | CCWGG | 3 cut(s) | 741, 2305, 2329 |
| PspN4I | GGNNCC | 2 cut(s) | 339, 553 |
| PspPI | GGNCC | 1 cut(s) | 1042 |
| PsuI | RGATCY | 4 cut(s) | 337, 528, 1532, 1753 |
| RsaI | GTAC | 7 cut(s) | 351, 543, 600, 1134, 1284, 1410, 1723 |
| RsaNI | GTAC | 7 cut(s) | 350, 542, 599, 1133, 1283, 1409, 1722 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1740 |
| SacI | GAGCTC | 2 cut(s) | 273, 445 |
| SatI | GCNGC | 1 cut(s) | 1856 |
| Sau96I | GGNCC | 1 cut(s) | 1042 |
| ScaI | AGTACT | 2 cut(s) | 543, 1284 |
| SchI | GAGTC | 1 cut(s) | 215 |
| ScrFI | CCNGG | 3 cut(s) | 743, 2307, 2331 |
| SduI | GDGCHC | 4 cut(s) | 273, 429, 445, 1496 |
| SfaNI | GCATC | 3 cut(s) | 254, 1928, 2175 |
| Sfr274I | CTCGAG | 1 cut(s) | 1571 |
| SfuI | TTCGAA | 1 cut(s) | 1125 |
| SinI | GGWCC | 1 cut(s) | 1042 |
| SlaI | CTCGAG | 1 cut(s) | 1571 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1740 |
| SmlI | CTYRAG | 3 cut(s) | 1155, 1571, 2189 |
| SmoI | CTYRAG | 3 cut(s) | 1155, 1571, 2189 |
| SseBI | AGGCCT | 1 cut(s) | 780 |
| SspMI | CTAG | 1 cut(s) | 182 |
| SstI | GAGCTC | 2 cut(s) | 273, 445 |
| StuI | AGGCCT | 1 cut(s) | 780 |
| StyD4I | CCNGG | 3 cut(s) | 741, 2305, 2329 |
| TaaI | ACNGT | 1 cut(s) | 1282 |
| TaiI | ACGT | 1 cut(s) | 1141 |
| TaqI | TCGA | 7 cut(s) | 123, 627, 754, 833, 954, 1125, 1572 |
| TatI | WGTACW | 2 cut(s) | 541, 1282 |
| TseFI | GTSAC | 1 cut(s) | 1792 |
| TseI | GCWGC | 1 cut(s) | 1855 |
| Tsp45I | GTSAC | 1 cut(s) | 1792 |
| TspGWI | ACGGA | 2 cut(s) | 330, 1631 |
| VpaK11BI | GGWCC | 1 cut(s) | 1042 |
| VspI | ATTAAT | 1 cut(s) | 816 |
| XhoI | CTCGAG | 1 cut(s) | 1571 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2274 |
| XspI | CTAG | 1 cut(s) | 182 |
| ZrmI | AGTACT | 2 cut(s) | 543, 1284 |
| Zsp2I | ATGCAT | 1 cut(s) | 247 |